Metagenome / Metatranscriptome Family F072624

Basic Information
Family ID	F072624
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	42 residues
Representative Sequence	DLARLLGDAFTIELHAVEPRIDPPPDNPHIADVVLRARRR
Number of Associated Samples	107
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	95.87 %
% of genes from short scaffolds (< 2000 bps)	93.39 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (61.983 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.661 % of family members)
Environment Ontology (ENVO)	Unclassified (30.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.322 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.35% β-sheet: 27.94% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13376	OmdA	4.96
PF01740	STAS	2.48
PF06197	DUF998	2.48
PF08241	Methyltransf_11	2.48
PF00171	Aldedh	2.48
PF07311	Dodecin	1.65
PF12697	Abhydrolase_6	1.65
PF00067	p450	1.65
PF01738	DLH	1.65
PF04075	F420H2_quin_red	1.65
PF00196	GerE	1.65
PF05988	DUF899	0.83
PF13473	Cupredoxin_1	0.83
PF02776	TPP_enzyme_N	0.83
PF00296	Bac_luciferase	0.83
PF13560	HTH_31	0.83
PF03706	LPG_synthase_TM	0.83
PF09995	MPAB_Lcp_cat	0.83
PF01799	Fer2_2	0.83
PF03704	BTAD	0.83
PF02738	MoCoBD_1	0.83
PF08044	DUF1707	0.83
PF14026	DUF4242	0.83
PF03006	HlyIII	0.83
PF10604	Polyketide_cyc2	0.83
PF00723	Glyco_hydro_15	0.83
PF13537	GATase_7	0.83
PF01906	YbjQ_1	0.83
PF13490	zf-HC2	0.83
PF06114	Peptidase_M78	0.83
PF00903	Glyoxalase	0.83
PF06441	EHN	0.83
PF01145	Band_7	0.83
PF13410	GST_C_2	0.83
PF06736	TMEM175	0.83
PF00583	Acetyltransf_1	0.83
PF07228	SpoIIE	0.83
PF00107	ADH_zinc_N	0.83
PF00155	Aminotran_1_2	0.83
PF00440	TetR_N	0.83
PF01061	ABC2_membrane	0.83
PF06983	3-dmu-9_3-mt	0.83
PF01243	Putative_PNPOx	0.83
PF01326	PPDK_N	0.83
PF00697	PRAI	0.83
PF13207	AAA_17	0.83
PF04072	LCM	0.83
PF08242	Methyltransf_12	0.83
PF02129	Peptidase_S15	0.83
PF03596	Cad	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.48
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.48
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.48
COG3371	Uncharacterized membrane protein	Function unknown [S]	2.48
COG2124	Cytochrome P450	Defense mechanisms [V]	1.65
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.65
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.83
COG4300	Cadmium resistance protein CadD, predicted permease	Inorganic ion transport and metabolism [P]	0.83
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.83
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.83
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.83
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.83
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.83
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.83
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.83
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.83
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.83
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.83
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.98 %
Unclassified	root	N/A	38.02 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.76 %
Unclassified	root	N/A	38.02 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.98 %
Unclassified	root	N/A	38.02 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.58 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.57 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.65 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.83 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.83 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.83 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.83 %
Actinomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
unclassified Actinomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces	0.83 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.83 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
Nitrolancea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea	0.83 %
Actinomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	0.83 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
Nitrolancea hollandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica	0.83 %
Actinomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	0.83 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.02 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.57 %
Nitrolancea hollandica Lb	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb	0.83 %
Actinomyces sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	0.83 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.83 %
Saccharomonospora saliphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101DI7ZU	Not Available	520	Open in IMG/M
3300004479\|Ga0062595_101709668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300005340\|Ga0070689_101480053	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005529\|Ga0070741_11404168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300005539\|Ga0068853_101086229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300005564\|Ga0070664_101363315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora saliphila	670	Open in IMG/M
3300005993\|Ga0080027_10357992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300006046\|Ga0066652_100610532	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300006048\|Ga0075363_100540090	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300006092\|Ga0082021_1014398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3523	Open in IMG/M
3300006102\|Ga0075015_100738190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300006174\|Ga0075014_100823719	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006755\|Ga0079222_10612995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	835	Open in IMG/M
3300006800\|Ga0066660_10413181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1118	Open in IMG/M
3300006806\|Ga0079220_11118432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300009137\|Ga0066709_102310932	Not Available	736	Open in IMG/M
3300009147\|Ga0114129_10863461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1149	Open in IMG/M
3300009177\|Ga0105248_10933064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300009698\|Ga0116216_10101484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1771	Open in IMG/M
3300010166\|Ga0126306_10157974	Not Available	1689	Open in IMG/M
3300010358\|Ga0126370_11259395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300010358\|Ga0126370_12541514	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010373\|Ga0134128_11070350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	891	Open in IMG/M
3300010398\|Ga0126383_13322390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300010867\|Ga0126347_1404091	Not Available	649	Open in IMG/M
3300012357\|Ga0137384_11324472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300012955\|Ga0164298_10338622	Not Available	948	Open in IMG/M
3300012960\|Ga0164301_10147245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1435	Open in IMG/M
3300012976\|Ga0134076_10299619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300012985\|Ga0164308_10103571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2007	Open in IMG/M
3300014150\|Ga0134081_10161365	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300014272\|Ga0075327_1253998	Not Available	574	Open in IMG/M
3300014657\|Ga0181522_10393430	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300014658\|Ga0181519_10902396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	547	Open in IMG/M
3300015082\|Ga0167662_1046529	Not Available	541	Open in IMG/M
3300015357\|Ga0134072_10136359	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300015372\|Ga0132256_100932006	Not Available	984	Open in IMG/M
3300015374\|Ga0132255_103745488	Not Available	646	Open in IMG/M
3300015374\|Ga0132255_104383585	Not Available	598	Open in IMG/M
3300016294\|Ga0182041_10514355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300016319\|Ga0182033_11539572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300016371\|Ga0182034_10716283	Not Available	852	Open in IMG/M
3300016387\|Ga0182040_11277916	Not Available	619	Open in IMG/M
3300017823\|Ga0187818_10351060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300017966\|Ga0187776_10214843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1215	Open in IMG/M
3300017972\|Ga0187781_10589646	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300017972\|Ga0187781_11476595	All Organisms → cellular organisms → Bacteria → Terrabacteria group	504	Open in IMG/M
3300017975\|Ga0187782_10286895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300018001\|Ga0187815_10102391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1208	Open in IMG/M
3300018037\|Ga0187883_10049267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Nitrolancea → Nitrolancea hollandica → Nitrolancea hollandica Lb	2233	Open in IMG/M
3300018060\|Ga0187765_10874257	Not Available	606	Open in IMG/M
3300018078\|Ga0184612_10456299	Not Available	634	Open in IMG/M
3300018081\|Ga0184625_10547936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300020150\|Ga0187768_1052294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300021181\|Ga0210388_11000913	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021362\|Ga0213882_10152183	Not Available	949	Open in IMG/M
3300021374\|Ga0213881_10170330	Not Available	957	Open in IMG/M
3300021377\|Ga0213874_10441591	All Organisms → cellular organisms → Bacteria → Terrabacteria group	512	Open in IMG/M
3300021405\|Ga0210387_10689422	Not Available	906	Open in IMG/M
3300021560\|Ga0126371_13847151	Not Available	506	Open in IMG/M
3300025908\|Ga0207643_11055733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300025922\|Ga0207646_11306519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300025927\|Ga0207687_11424437	Not Available	595	Open in IMG/M
3300025934\|Ga0207686_11528668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300026550\|Ga0209474_10574220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300026557\|Ga0179587_11034774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300027636\|Ga0214469_1209984	Not Available	531	Open in IMG/M
3300030580\|Ga0311355_11553100	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300030619\|Ga0268386_10348385	Not Available	1057	Open in IMG/M
3300030706\|Ga0310039_10163176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	895	Open in IMG/M
3300031234\|Ga0302325_10707181	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300031251\|Ga0265327_10273632	Not Available	748	Open in IMG/M
3300031544\|Ga0318534_10252703	Not Available	1017	Open in IMG/M
3300031561\|Ga0318528_10699088	Not Available	543	Open in IMG/M
3300031564\|Ga0318573_10195866	Not Available	1070	Open in IMG/M
3300031564\|Ga0318573_10642547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300031640\|Ga0318555_10132196	Not Available	1331	Open in IMG/M
3300031681\|Ga0318572_10143595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1376	Open in IMG/M
3300031744\|Ga0306918_10920616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300031744\|Ga0306918_11082700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300031748\|Ga0318492_10317254	Not Available	812	Open in IMG/M
3300031753\|Ga0307477_10439905	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031765\|Ga0318554_10324613	Not Available	875	Open in IMG/M
3300031769\|Ga0318526_10094012	Not Available	1192	Open in IMG/M
3300031770\|Ga0318521_10200510	Not Available	1152	Open in IMG/M
3300031778\|Ga0318498_10213275	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300031890\|Ga0306925_11037915	Not Available	833	Open in IMG/M
3300031896\|Ga0318551_10528309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300031896\|Ga0318551_10941524	Not Available	505	Open in IMG/M
3300031897\|Ga0318520_10294077	All Organisms → cellular organisms → Bacteria → Terrabacteria group	977	Open in IMG/M
3300031910\|Ga0306923_11219082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300031912\|Ga0306921_11994361	Not Available	618	Open in IMG/M
3300031912\|Ga0306921_12409856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300031912\|Ga0306921_12773958	Not Available	502	Open in IMG/M
3300031962\|Ga0307479_12069416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300032009\|Ga0318563_10580426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300032010\|Ga0318569_10229337	Not Available	862	Open in IMG/M
3300032055\|Ga0318575_10178762	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1062	Open in IMG/M
3300032060\|Ga0318505_10411832	Not Available	639	Open in IMG/M
3300032064\|Ga0318510_10164988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300032080\|Ga0326721_10603610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300032089\|Ga0318525_10702673	Not Available	514	Open in IMG/M
3300032091\|Ga0318577_10313047	Not Available	751	Open in IMG/M
3300032205\|Ga0307472_102081329	Not Available	570	Open in IMG/M
3300032261\|Ga0306920_102483142	Not Available	713	Open in IMG/M
3300032261\|Ga0306920_102844663	Not Available	658	Open in IMG/M
3300032261\|Ga0306920_104250519	Not Available	516	Open in IMG/M
3300032770\|Ga0335085_10017044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10478	Open in IMG/M
3300032770\|Ga0335085_11694241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300032770\|Ga0335085_12053893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300032782\|Ga0335082_10065775	All Organisms → cellular organisms → Bacteria	3688	Open in IMG/M
3300032892\|Ga0335081_11067178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300032892\|Ga0335081_11086307	Not Available	923	Open in IMG/M
3300032898\|Ga0335072_10337661	Not Available	1659	Open in IMG/M
3300032898\|Ga0335072_11181020	Not Available	682	Open in IMG/M
3300033134\|Ga0335073_10181434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2634	Open in IMG/M
3300033181\|Ga0272431_10067567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2705	Open in IMG/M
3300033289\|Ga0310914_10383931	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300033290\|Ga0318519_10344786	Not Available	879	Open in IMG/M
3300033551\|Ga0247830_11212910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Actinomyces → unclassified Actinomyces → Actinomyces sp.	603	Open in IMG/M
3300033755\|Ga0371489_0007254	All Organisms → cellular organisms → Bacteria	11138	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.43%
Host-Associated	Host-Associated	10.74%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.99%
Plants	Host-Associated → Plants	10.74%
Aquatic	Environmental → Aquatic	7.44%
Wastewater	Engineered → Wastewater	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Sediment	Environmental → Aquatic → Sediment	3.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.31%
Peat	Environmental → Terrestrial → Peat	2.48%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.65%
Roots	Host-Associated → Plants → Roots	1.65%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.05%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Loam	Environmental → Terrestrial → Soil → Loam	1.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.83%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.44%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.65%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015082	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11c, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072624

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_01962530	2189573001	Grass Soil	STILVPLLDNDFTVELHTVEARIDPPSGTPHISDVVLRARRR
Ga0062595_1017096682	3300004479	Soil	MSVHKLGGLLGDEFTVELHAVEPRIDPPPGTPHIADVVLRARRR*
Ga0070689_1014800531	3300005340	Switchgrass Rhizosphere	DYVGVDDLASLLDEDFTVELREVAPRIDPPPNTPHIADVILRARRR*
Ga0070741_114041681	3300005529	Surface Soil	GDDFAIERYGVEPRVDPPPGTPHVGDVVLRARCH*
Ga0068853_1010862292	3300005539	Corn Rhizosphere	PDEYVGADDLAPLLEADFAVELHAVEPRIDPPPGTPHVADVVLRARRR*
Ga0070664_1013633151	3300005564	Corn Rhizosphere	LFRLLGDDFTVELHAVEPRIDPPPGTPHIADVVLRARRR*
Ga0080027_103579921	3300005993	Prmafrost Soil	ADYVGADDLGQLLGDDFTVELHGVESRIDPPPDNPYIADIVLRARRR*
Ga0066652_1006105322	3300006046	Soil	LLGADFTVELHAVEPRIDPPRDTPHIADVILRARHH*
Ga0075363_1005400903	3300006048	Populus Endosphere	QLLGADFTVELHAVEPRIDPPPGNPHIADVVLRARRR*
Ga0082021_10143986	3300006092	Wastewater Treatment Plant	ALLATRDDFTVELDVVEPRVDPPGGNPHIADVVVRARRR*
Ga0075015_1007381902	3300006102	Watersheds	PADYVGADDLEQLLGADFVIELHAVEPRIDPPPGTPHIADIVLRARRH*
Ga0075014_1008237191	3300006174	Watersheds	LLGDDFTVELDVVEPRVDPPPHTPHIADVVLRARRG*
Ga0079222_106129953	3300006755	Agricultural Soil	LAPLLAADFTIELHAAEPRIDPPPGTPHIADVVLRARRR*
Ga0066660_104131811	3300006800	Soil	MKSHGVDRADYIGAADLGQLLGEDFTIELHAVEARIDPPPGTTRVADVVVRARRH*
Ga0079220_111184321	3300006806	Agricultural Soil	RLLGGEFTIELHAVQPRIDPPPDHRDIADVVLRARRR*
Ga0066709_1023109321	3300009137	Grasslands Soil	RLLGDDFTIEMHTVEPRIDPPPGTPHIADVVLRARHR*
Ga0114129_108634611	3300009147	Populus Rhizosphere	VDPADYFGDDDLGRLLSDDFTVERHAVEPRIYPPPGTPHIADIILRARRR*
Ga0105248_109330642	3300009177	Switchgrass Rhizosphere	LDDDFTVERHAIEPRIDPPPGTPHVADVVLRARRR*
Ga0116216_101014841	3300009698	Peatlands Soil	RLLGDDFTIELRAVQPRIDPPPDHPHIADVVLRARRR*
Ga0126306_101579741	3300010166	Serpentine Soil	VGADYLGRLLSDDFTIEVHAVEPRIDPPPDTPHSADVVLRARHR*
Ga0126370_112593951	3300010358	Tropical Forest Soil	FDADDLARLLGDAFTIELHAVEPRLDAPPDNPHIADVVLRARRR*
Ga0126370_125415142	3300010358	Tropical Forest Soil	DYVDAGDLARLLGGHFTIGLHAVEPRIDPPPDTPHIADVVLRAWRR*
Ga0134128_110703501	3300010373	Terrestrial Soil	FGADDLARLLDDDFTVERHAIEPRIDPPPGTPHVADVVLRARRR*
Ga0126383_133223901	3300010398	Tropical Forest Soil	DYVGADDLARLLGDAFTVELHAVEPRIDPPPGTPHIADIVLRARRR*
Ga0126347_14040911	3300010867	Boreal Forest Soil	ADYIEADGLCQLLGDEFTVELFAVEPRIDPPPDNPHVADVVLRARRR*
Ga0137384_113244721	3300012357	Vadose Zone Soil	DYFGADDLGRLLGDDCTIEMHTVEPRIDPPPGTPHIADVVLRARHR*
Ga0164298_103386223	3300012955	Soil	GADDLVPLLAGDFTVELHAVEPRIDPPPGTPHIADVVLRARRR*
Ga0164301_101472451	3300012960	Soil	PADYVGADDLVPLLAGDFTVELHAVEPRIDPPPGTPHIADVVLRARRR*
Ga0134076_102996192	3300012976	Grasslands Soil	DLGRLLGEDFAVELHAVEARIDPPPGTPHIADVVLRARRH*
Ga0164308_101035713	3300012985	Soil	DYVGADELRELLVADFTIELDVVEPRLDPPPGTPHVADIVLRARRR*
Ga0134081_101613652	3300014150	Grasslands Soil	IDPADYVGADDLGRLLGNDFRVELRTVEPRLDPPPGTSHIADIILRARRS*
Ga0075327_12539982	3300014272	Natural And Restored Wetlands	GDDFTVERHAVEARIDPPPGAPHIADVVLRARRR*
Ga0181522_103934302	3300014657	Bog	SQGIDPADYVDADDLGRLLADEFTIELRAVKPRIDPPPDNPHIADVVLRARRR*
Ga0181519_109023961	3300014658	Bog	LLGDDFTVDLHAVEPRIDPPPEGVHIADVVLRARRR*
Ga0167662_10465291	3300015082	Glacier Forefield Soil	VDPADYVDADDLRPLLGDEFAVELHAVEPRIDPPPDNPHIADVVLRARRR*
Ga0134072_101363593	3300015357	Grasslands Soil	DLGRLLGNDFRVELRTVEPRLDPPPGTSHIADIILRARRS*
Ga0132256_1009320061	3300015372	Arabidopsis Rhizosphere	YVSADDLHRLLGEDFTVELHAVEPRIDPPPDNPHIADVVLRARRR*
Ga0132255_1037454882	3300015374	Arabidopsis Rhizosphere	RELLVADFTIELDVVEPRLDPPPGTPHVADIVLRARRR*
Ga0132255_1043835851	3300015374	Arabidopsis Rhizosphere	LATLLGDDFTVELHAAEPRVDPPPGTPHIADVVLRARRR*
Ga0182041_105143552	3300016294	Soil	DLARLLGDAFTIELHAIEPRIDPPPDNPHIADVVLRARRR
Ga0182033_115395721	3300016319	Soil	LARLLVGAFTIERHAAEPRIDPPPDAPHIAEVVLRARRR
Ga0182034_107162832	3300016371	Soil	DYVDADDLARLLGDAFTIELHAVEPRIDPPPDNPHIADVVLRARRR
Ga0182040_112779161	3300016387	Soil	DPADYFGIDDVAHVLADDFTIEFHSVEARVDPPPGTPHIADAVLRARRH
Ga0187818_103510601	3300017823	Freshwater Sediment	PADYVDADALGRLLGGKFTIELHAVQPRIDPPPDTPHIADVVLRARRR
Ga0187776_102148431	3300017966	Tropical Peatland	DLARLLGDAFTIELHAAGPRIDPPPDNPHIADVVLRARRR
Ga0187781_105896462	3300017972	Tropical Peatland	DLARLLDGDFTIELHATGPRIDPPPDTPHIADVVLRARRHCR
Ga0187781_114765951	3300017972	Tropical Peatland	DPADYVDADDLSRLLGGQFTIELHAVQPRIDPPPDAPHIADVVLRARRR
Ga0187782_102868952	3300017975	Tropical Peatland	MKDRGARLLGEAFTIELLAVEPRIGPPPDNPHVADVVLRARRR
Ga0187815_101023913	3300018001	Freshwater Sediment	LGDEFTIELHAVQPRIDPPPDNPHIADVVLRARRR
Ga0187883_100492671	3300018037	Peatland	LISDDFTVELHSVEPRIDPPPDNPHIADVVLRARRR
Ga0187765_108742572	3300018060	Tropical Peatland	LLGGQFTIELHAVQPRIDPPPDHRHIADVVLRARRR
Ga0184612_104562992	3300018078	Groundwater Sediment	FGDNDLGRLLGDDFTVERHAVEPRIDPPTGTPDITDIILRARRR
Ga0184625_105479361	3300018081	Groundwater Sediment	DDLGRLLGDDFTVERHAVEPRIDPPPGTPHIADIILRARRR
Ga0187768_10522941	3300020150	Tropical Peatland	VDADDLGRLLSDEFTIELHAVEPRIDPPPDTPHIADVVLRARRR
Ga0210388_110009131	3300021181	Soil	AAYVGVDDLRALLGGDFDVELHAIEPRTDPPAGTPHVADVVLRARRRA
Ga0213882_101521832	3300021362	Exposed Rock	LARLLGGAFTIELHAVEPRIDPPPDNPHIADVVLRARRRGD
Ga0213881_101703302	3300021374	Exposed Rock	RLLGDEFTIELHAVQPRIDPPPDNPHIADVVLRARRR
Ga0213874_104415912	3300021377	Plant Roots	DYVDADDLARLLGDVFTIELHVVEPRIDPPPDHPDIADIVLRARRR
Ga0210387_106894222	3300021405	Soil	YVGAEDLYRLLGDDFTVELNVVEPRIDPPPDAPHIADAVLRARRR
Ga0126371_138471511	3300021560	Tropical Forest Soil	DYVDADDLGRLLSGQFTVELHAVEPRIDPPPDNPHIADVVLRARRC
Ga0207643_110557331	3300025908	Miscanthus Rhizosphere	PADYVLADDLARLLDEAFTVELHAVDARIDPPPGTPHIADVVLRARRR
Ga0207646_113065191	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GRLLSDDFTVELHAVEPRIDPPPGTPHIADVVLRARRR
Ga0207687_114244372	3300025927	Miscanthus Rhizosphere	AKGHDPADYVAIEDLTRLLGDDFTIGRLVTEPRIDPPPDNPHVADVVLLARRR
Ga0207686_115286682	3300025934	Miscanthus Rhizosphere	DPADYVGADDLIQLLHDNFTLELHAVSPRIDPPPDTPHIADVVLRGRRR
Ga0209474_105742202	3300026550	Soil	GADDLVDLLGDDFTVELHAVEPRIDPPPGTPHIADIVVRARRH
Ga0179587_110347741	3300026557	Vadose Zone Soil	NAEDLALLLGDAFTIEWHAAEPRIDPPPDNPHTADVVLRARRR
Ga0214469_12099842	3300027636	Soil	ADYVGADDLGRLLGDDFMVELHAVEPRVDPPAGSPHIADVVVLGRRR
Ga0311355_115531002	3300030580	Palsa	LGDEFTIELHAVEPRIDPPADSPDIADVVLRARRG
Ga0268386_103483853	3300030619	Soil	VGADDLDRLLGDDFTVELHAVEPRIDPPAGSPHIADVVLRARRR
Ga0310039_101631761	3300030706	Peatlands Soil	ADYVDADDLARLLGEEFTIELHAVQPRIDPPPDNPHIADVVLRARRR
Ga0302325_107071812	3300031234	Palsa	DYVSADDLGRLLGDDFTVEVHAVEPRINPPADNPHAADVVLRARRR
Ga0265327_102736321	3300031251	Rhizosphere	LADDFTLELDVVEPRIDPPPDTPHIADVVLRARRR
Ga0318534_102527033	3300031544	Soil	IGRLLGDAFTIELHAVQPRIDPPADTPHIADVVLRARRR
Ga0318528_106990881	3300031561	Soil	YIGADDLVQFLDDFTVELHAVEPRIDPPPDTPHVADVVLRAQRR
Ga0318573_101958662	3300031564	Soil	VSGGAFTIELHAAEPRIDPPPDTPHIADVVLRARRR
Ga0318573_106425471	3300031564	Soil	VDADDLGRLLGDAFTIELHAVEPRIDPPPDNPHIADIVLRARRR
Ga0318555_101321963	3300031640	Soil	ARLLGGAFTIELHAAEPRIDPPPDTPHIADVVLRARRR
Ga0318572_101435951	3300031681	Soil	ADDLARLLGDAFTIELHEVRPRIDPPPDNPHIDDIVLRARRR
Ga0306918_109206162	3300031744	Soil	LGRLLGGQFTIELHAAQPRIDPPPDNPHIADVVLRARRR
Ga0306918_110827001	3300031744	Soil	YFDADDLARLLGDAFTIELHAIEPRIDPPPDNPHIADVVLRARRR
Ga0318492_103172541	3300031748	Soil	LGRLLGDAFTIELHAVQPRIDPPADTPHIADVVLRARRR
Ga0307477_104399052	3300031753	Hardwood Forest Soil	DYVDADDLRQLLGDDFTVELDTVEPRIDPPPDTPHIADVVLRARRR
Ga0318554_103246131	3300031765	Soil	DYVDADDLGRLLGGEFTIELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0318526_100940122	3300031769	Soil	DYVDADGLARLLGGAFTIELHAAEPRIDPPPDTPHIADVVLRARRR
Ga0318521_102005102	3300031770	Soil	RRLLGGEFTLELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0318498_102132751	3300031778	Soil	DLARLLGDAFTIELHAVEPRIDPPPDNPHIADVVLRARRR
Ga0306925_110379152	3300031890	Soil	LGRLLGDEFTIELHAVQPRINPPPDHRDIADVVLRARRR
Ga0318551_105283091	3300031896	Soil	RLLGDAFTIELHAVQPRIDPPPDNPHIADVVLRARRR
Ga0318551_109415242	3300031896	Soil	VDPADYVDVDDLGRLLGDAFTIERHAVQPRIYPPPDNPHIADVVLRARRR
Ga0318520_102940771	3300031897	Soil	VDPADYVDADDLARLLGEEFTIELHAVEPRIDPPPDHRHIADIVLRARRH
Ga0306923_112190821	3300031910	Soil	LGDAFTIELHAIEPRIDPPPDNPHIADVVLRARRR
Ga0306921_119943612	3300031912	Soil	LDDEFAIELHTIEPRIDPPPGNPHFADVVIRARRR
Ga0306921_124098562	3300031912	Soil	ADYVDADDLRRLLGGEFMIELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0306921_127739582	3300031912	Soil	LLGDAFTIERHAVQPRIYPPPDNPHIADVVLRARRR
Ga0307479_120694161	3300031962	Hardwood Forest Soil	RLLSDDFTVELHAVEPRIDPPPGTPHVADVVLCARRR
Ga0318563_105804262	3300032009	Soil	VGDLLLLLGGQFTVELHAIEPRIDPPPGNPHIADVIVRARRR
Ga0318569_102293371	3300032010	Soil	LVQFLDDFTVELHAVEPRIDPPPDTPHVADVVLRAQRR
Ga0318575_101787622	3300032055	Soil	LGEEFTIELHAVEPRIDPPPDHRHIADIVLRARRH
Ga0318505_104118321	3300032060	Soil	RLLGDAFTIELHAVQPRIHPPADTPHIADVVLRARRR
Ga0318510_101649882	3300032064	Soil	VDADDLRRLLGGEFMIELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0326721_106036102	3300032080	Soil	GAEDLVSLLGDDFTVESHAVEPRLDPPPGTPHVADVVLRARRR
Ga0318525_107026731	3300032089	Soil	VDADGLARLLGGAFTIELHAAEPRIDPPPDTPHIADVVLRARRR
Ga0318577_103130472	3300032091	Soil	RGLLSDDFMVELHAIEPRVDPPPDTPHIADVVLRARRR
Ga0307472_1020813292	3300032205	Hardwood Forest Soil	FVAQQPDYVDADDLGRLLGDEFTIDRHTAEPRIDPPPDTAHIGDIVLRARRR
Ga0306920_1024831422	3300032261	Soil	VDADDLARLLGDAFTIELHAVEPRIDPPPDNPHIADVVLRARRR
Ga0306920_1028446632	3300032261	Soil	ARLLGDAFTIELHAVEPRVDPPPDHPHIAGVVLRARRR
Ga0306920_1042505191	3300032261	Soil	DLRRLLAEDFTVELDAVEPRVDPPPDTSHMADVVLRARGR
Ga0335085_100170446	3300032770	Soil	MSMRRGSPVRLLGDAFTIELHAVEPRFDPPPDSPHIAGVVLRARRG
Ga0335085_116942411	3300032770	Soil	VDPADYVDADDLGRLLGDEFTIELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0335085_120538932	3300032770	Soil	LGGEFTIELRAVQPRIDPPPDHRDIADVVLRARRR
Ga0335082_100657751	3300032782	Soil	LLGGEFTIELRAVQPRIDPPPDHRDIADVVLRARRR
Ga0335081_110671782	3300032892	Soil	DRLLGDAFTIELHAVEPRIDPPPDNPHIADLVLRARRR
Ga0335081_110863071	3300032892	Soil	VDPADYFDADDLARLLGDAFTIELHAAEPRIDPPPDNPHIADVVLRARRR
Ga0335072_103376611	3300032898	Soil	GADDVVRLLGDGFVLERHAAEPRTDPPPGTPHIADVVVRARRR
Ga0335072_111810201	3300032898	Soil	VSGDFTVEQHSVQERIDPPPDTPHVADVVLRARRR
Ga0335073_101814344	3300033134	Soil	LLGDDFTVELHAVEPRIDPPPDTPHIVDVVLRARHR
Ga0272431_100675671	3300033181	Rock	MLAEEFTVELHAVEARIDPPPDNPHVADVVLRARRR
Ga0310914_103839312	3300033289	Soil	ARLLVGAFTIERHAAEPRIDPPPDTPHIAEVVLRARRR
Ga0318519_103447861	3300033290	Soil	DYVDADDLRRLLGGEFTLELHAVQPRIDPPPDHRDIADVVLRARRR
Ga0247830_112129102	3300033551	Soil	DDVARVLGEGFAIELHAVEPRLDPPPGTPHIADIVLRARRR
Ga0371489_0007254_11030_11137	3300033755	Peat Soil	LGDDFTVELHAVEPRIDPPPDNPHIADVVLRARRR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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