Metagenome / Metatranscriptome Family F072618

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072618
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	70 residues
Representative Sequence	MAMPQPGDLITAFSPQPGRCFRMVYSRQLQATHCRQPPAWKGIWRDAKGKSWYVEACRDHAPKWVREMAG
Number of Associated Samples	63
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	30.51 %
% of genes near scaffold ends (potentially truncated)	31.40 %
% of genes from short scaffolds (< 2000 bps)	74.38 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (32.231 % of family members)
Environment Ontology (ENVO)	Unclassified (44.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.760 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.14% β-sheet: 17.35% Coil/Unstructured: 75.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02467	Whib	4.96
PF02826	2-Hacid_dh_C	2.48
PF12680	SnoaL_2	1.65
PF13701	DDE_Tnp_1_4	1.65
PF02371	Transposase_20	1.65
PF01565	FAD_binding_4	1.65
PF13683	rve_3	1.65
PF01527	HTH_Tnp_1	1.65
PF10137	TIR-like	0.83
PF00561	Abhydrolase_1	0.83
PF04909	Amidohydro_2	0.83
PF00069	Pkinase	0.83
PF12704	MacB_PCD	0.83
PF14714	KH_dom-like	0.83
PF09851	SHOCT	0.83
PF07690	MFS_1	0.83
PF10056	DUF2293	0.83
PF00171	Aldedh	0.83
PF13193	AMP-binding_C	0.83
PF06262	Zincin_1	0.83
PF06114	Peptidase_M78	0.83
PF14311	DUF4379	0.83
PF12146	Hydrolase_4	0.83
PF12728	HTH_17	0.83
PF00389	2-Hacid_dh	0.83
PF07885	Ion_trans_2	0.83
PF00027	cNMP_binding	0.83
PF05899	Cupin_3	0.83
PF02556	SecB	0.83
PF01636	APH	0.83
PF12695	Abhydrolase_5	0.83
PF13376	OmdA	0.83
PF00583	Acetyltransf_1	0.83
PF13561	adh_short_C2	0.83
PF00106	adh_short	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.31
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.65
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.83
COG1952	Preprotein translocase subunit SecB	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
All Organisms	root	All Organisms	32.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
cellular organisms	root	All Organisms → cellular organisms	32.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.01 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.22 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.83 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.83 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.83 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.65 %
Streptomyces sp. RKAG290	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. RKAG290	0.83 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.83 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10049248	Not Available	1812	Open in IMG/M
3300004082\|Ga0062384_100855025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. RKAG290	640	Open in IMG/M
3300004091\|Ga0062387_101616738	Not Available	523	Open in IMG/M
3300004635\|Ga0062388_100193083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1599	Open in IMG/M
3300006052\|Ga0075029_100207358	Not Available	1226	Open in IMG/M
3300006052\|Ga0075029_100431212	Not Available	861	Open in IMG/M
3300006052\|Ga0075029_100751698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300006059\|Ga0075017_100260738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1270	Open in IMG/M
3300006059\|Ga0075017_100286335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1214	Open in IMG/M
3300006059\|Ga0075017_100396950	Not Available	1034	Open in IMG/M
3300006059\|Ga0075017_100552657	Not Available	877	Open in IMG/M
3300006059\|Ga0075017_100764172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300006059\|Ga0075017_101067215	Not Available	630	Open in IMG/M
3300006059\|Ga0075017_101514514	Not Available	529	Open in IMG/M
3300006059\|Ga0075017_101648215	Not Available	507	Open in IMG/M
3300006086\|Ga0075019_10167928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1289	Open in IMG/M
3300006102\|Ga0075015_100015236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3315	Open in IMG/M
3300006102\|Ga0075015_100308869	Not Available	872	Open in IMG/M
3300006102\|Ga0075015_100558136	Not Available	666	Open in IMG/M
3300006162\|Ga0075030_100523209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300006638\|Ga0075522_10299401	Not Available	780	Open in IMG/M
3300009520\|Ga0116214_1069018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1288	Open in IMG/M
3300009520\|Ga0116214_1326990	Not Available	591	Open in IMG/M
3300009525\|Ga0116220_10010227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3708	Open in IMG/M
3300009525\|Ga0116220_10093485	Not Available	1271	Open in IMG/M
3300009635\|Ga0116117_1133855	Not Available	632	Open in IMG/M
3300009643\|Ga0116110_1204388	Not Available	640	Open in IMG/M
3300009645\|Ga0116106_1154471	Not Available	734	Open in IMG/M
3300009665\|Ga0116135_1325100	Not Available	612	Open in IMG/M
3300009672\|Ga0116215_1421564	Not Available	577	Open in IMG/M
3300009698\|Ga0116216_10008535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6496	Open in IMG/M
3300009698\|Ga0116216_10519846	Not Available	719	Open in IMG/M
3300009700\|Ga0116217_10115790	Not Available	1819	Open in IMG/M
3300009700\|Ga0116217_10240078	Not Available	1179	Open in IMG/M
3300009700\|Ga0116217_10547301	Not Available	724	Open in IMG/M
3300009700\|Ga0116217_11029416	Not Available	504	Open in IMG/M
3300010379\|Ga0136449_100159253	Not Available	4402	Open in IMG/M
3300010379\|Ga0136449_100197711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3832	Open in IMG/M
3300010379\|Ga0136449_100302042	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300010379\|Ga0136449_100537374	Not Available	2015	Open in IMG/M
3300010379\|Ga0136449_100942790	Not Available	1399	Open in IMG/M
3300010379\|Ga0136449_101866459	Not Available	895	Open in IMG/M
3300010379\|Ga0136449_102552078	Not Available	731	Open in IMG/M
3300010379\|Ga0136449_104548405	Not Available	509	Open in IMG/M
3300014156\|Ga0181518_10193988	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300014158\|Ga0181521_10512351	Not Available	572	Open in IMG/M
3300014159\|Ga0181530_10425220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300014159\|Ga0181530_10447741	Not Available	650	Open in IMG/M
3300014162\|Ga0181538_10024561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4105	Open in IMG/M
3300014162\|Ga0181538_10148228	Not Available	1348	Open in IMG/M
3300014164\|Ga0181532_10018564	All Organisms → cellular organisms → Bacteria	5111	Open in IMG/M
3300014164\|Ga0181532_10053610	Not Available	2653	Open in IMG/M
3300014164\|Ga0181532_10181360	Not Available	1246	Open in IMG/M
3300014164\|Ga0181532_10401653	Not Available	761	Open in IMG/M
3300014165\|Ga0181523_10003989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13036	Open in IMG/M
3300014167\|Ga0181528_10282771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300014169\|Ga0181531_10260163	Not Available	1059	Open in IMG/M
3300014489\|Ga0182018_10280082	Not Available	911	Open in IMG/M
3300014495\|Ga0182015_10039370	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300014495\|Ga0182015_10868951	Not Available	565	Open in IMG/M
3300014501\|Ga0182024_10178589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2936	Open in IMG/M
3300014501\|Ga0182024_10629420	Not Available	1338	Open in IMG/M
3300014501\|Ga0182024_11082626	Not Available	948	Open in IMG/M
3300014501\|Ga0182024_11425240	Not Available	795	Open in IMG/M
3300014501\|Ga0182024_11830439	Not Available	678	Open in IMG/M
3300014501\|Ga0182024_12650521	Not Available	537	Open in IMG/M
3300014638\|Ga0181536_10454169	Not Available	564	Open in IMG/M
3300014655\|Ga0181516_10186588	Not Available	1052	Open in IMG/M
3300014838\|Ga0182030_10000518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73023	Open in IMG/M
3300014838\|Ga0182030_10256832	All Organisms → cellular organisms → Bacteria	1988	Open in IMG/M
3300016750\|Ga0181505_10081515	Not Available	1754	Open in IMG/M
3300017932\|Ga0187814_10026731	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2157	Open in IMG/M
3300017942\|Ga0187808_10122669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300017946\|Ga0187879_10005423	Not Available	8420	Open in IMG/M
3300017946\|Ga0187879_10441652	Not Available	721	Open in IMG/M
3300017955\|Ga0187817_10110624	Not Available	1733	Open in IMG/M
3300018009\|Ga0187884_10240431	Not Available	739	Open in IMG/M
3300018009\|Ga0187884_10247658	Not Available	726	Open in IMG/M
3300018025\|Ga0187885_10207158	Not Available	907	Open in IMG/M
3300018025\|Ga0187885_10536283	Not Available	521	Open in IMG/M
3300018033\|Ga0187867_10513146	Not Available	659	Open in IMG/M
3300018040\|Ga0187862_10064770	Not Available	2613	Open in IMG/M
3300018040\|Ga0187862_10531480	Not Available	704	Open in IMG/M
3300018043\|Ga0187887_10459628	Not Available	751	Open in IMG/M
3300018043\|Ga0187887_10937152	Not Available	513	Open in IMG/M
3300018047\|Ga0187859_10628647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	606	Open in IMG/M
3300018057\|Ga0187858_10306474	Not Available	1005	Open in IMG/M
3300023090\|Ga0224558_1032234	Not Available	2378	Open in IMG/M
3300023101\|Ga0224557_1239982	Not Available	606	Open in IMG/M
3300027570\|Ga0208043_1100885	Not Available	782	Open in IMG/M
3300027692\|Ga0209530_1186540	Not Available	575	Open in IMG/M
3300027905\|Ga0209415_10277116	Not Available	1475	Open in IMG/M
3300029943\|Ga0311340_10245647	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300029999\|Ga0311339_10665862	Not Available	1024	Open in IMG/M
3300030399\|Ga0311353_11022493	Not Available	691	Open in IMG/M
3300030494\|Ga0310037_10059176	Not Available	1813	Open in IMG/M
3300030503\|Ga0311370_11121529	Not Available	862	Open in IMG/M
3300031234\|Ga0302325_11289611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	962	Open in IMG/M
3300031236\|Ga0302324_100507690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1758	Open in IMG/M
3300031236\|Ga0302324_101005711	Not Available	1133	Open in IMG/M
3300032160\|Ga0311301_10032946	All Organisms → cellular organisms → Bacteria	13196	Open in IMG/M
3300032160\|Ga0311301_10042164	Not Available	10939	Open in IMG/M
3300032160\|Ga0311301_10059630	All Organisms → cellular organisms → Bacteria	8383	Open in IMG/M
3300032160\|Ga0311301_10076534	Not Available	6950	Open in IMG/M
3300032160\|Ga0311301_10094293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5940	Open in IMG/M
3300032160\|Ga0311301_10094650	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5921	Open in IMG/M
3300032160\|Ga0311301_10120777	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4943	Open in IMG/M
3300032160\|Ga0311301_10133402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4597	Open in IMG/M
3300032160\|Ga0311301_10204967	All Organisms → cellular organisms → Bacteria	3368	Open in IMG/M
3300032160\|Ga0311301_10357077	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300032160\|Ga0311301_10553647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1680	Open in IMG/M
3300032160\|Ga0311301_10627403	Not Available	1538	Open in IMG/M
3300032160\|Ga0311301_11150931	Not Available	1002	Open in IMG/M
3300032160\|Ga0311301_11231465	Not Available	955	Open in IMG/M
3300032160\|Ga0311301_12175808	Not Available	638	Open in IMG/M
3300032160\|Ga0311301_12313029	Not Available	611	Open in IMG/M
3300033887\|Ga0334790_231125	Not Available	519	Open in IMG/M
3300034163\|Ga0370515_0095780	Not Available	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.07%
Aquatic	Environmental → Aquatic	47.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.80%
Freshwater	Environmental → Aquatic → Freshwater	33.88%
Sediment	Environmental → Aquatic → Sediment	14.05%
Peat	Environmental → Terrestrial → Peat	8.26%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	33.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.05%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	28.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	32.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	14.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	4.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.48%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.48%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.48%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_100492481	3300004080	Bog Forest Soil	YCTVELLVGGPIAYGRAVDQMPEPGDLIVAFSPQPWRCFRMVYSRQLQATHCRGEPAWKGVWRDRSGKSWYVEACREHAPKVTSAAADGV*
Ga0062384_1008550251	3300004082	Bog Forest Soil	MPPPVYPQLVNGMPETGDLIEAFSPQPRRCFRMVQSVQLQATHCYAPPAWKGVRRDRTGASWSVEAC
Ga0062387_1016167381	3300004091	Bog Forest Soil	MPQPGDLITAFSVRPGSCFRMVYDRNLQASHCPQPPAWRGIWRDATTRSWYVEACREH
Ga0062388_1001930832	3300004635	Bog Forest Soil	MPPPVYPQLVNGMPETGDLIEAFSPQPRRCFRMVQSVQLQATHCYAPPAWKGVRRDRTGASWSVEACLRHAPRRTSRLSEGF*
Ga0075029_1002073581	3300006052	Watersheds	VIATPEPGDLITAFSPRPGRCFRMVYSHQLQADHCRQPPAWKGQWQDVKGHCWYVEACREHAPKVAGGALEGF*
Ga0075029_1004312121	3300006052	Watersheds	MDPMPEPGDLIAAFSPQRGRYFRMVYGHQLQADHCRQPPAWKGQWQDVKGRWWYVEACRVHAPKL*
Ga0075029_1007516982	3300006052	Watersheds	LITAFSPQPGRCFRMVYSRQLQADHCRQPPAWKGQWQDVKGHWWYAEARREHAPKRF*
Ga0075017_1002607382	3300006059	Watersheds	MDGMPEPGDLIVAFSPQPGRCFRMVYSHQLQATHCPEPPAWKGMWQDTKGASWYVEACWEHASTVYPSER*
Ga0075017_1002863352	3300006059	Watersheds	VYRRPVIPMPEPGDLIEAFAPLPGRCFPMLYSHQLQADHCPQLPAWKGVWRDRSGKRWYVETCWEHAK*
Ga0075017_1003969502	3300006059	Watersheds	MDRMPEPGDPVEAFSPQPDRCFPMVSSRRLLATHCRREPAWKGDWKDRAGHSWYVEACRQHAPKLTSAVAEGF*
Ga0075017_1005526572	3300006059	Watersheds	MPEPGDLITAFSQQPGRCFRMVYSVQLQAPHCRQPPGWRGIWTDSKDKSWYVQACRAHAP
Ga0075017_1007641722	3300006059	Watersheds	LSRDLIRRRSTVNSVSPMPEPGDLIAAFSPQPGRCFRMVLGHQLQADHCRRPPAWKGIWTDANGKSWSFESCRTHAPLVTSSPSERF*
Ga0075017_1010672151	3300006059	Watersheds	MDLMPEPGDLIQRSARNSAGAFEGQSHQLQADHCRQPPAWKGQWQDVKGRWWYVEACPEHAPKVTSGASE
Ga0075017_1015145142	3300006059	Watersheds	VPKPGDLITAFIPQPGRCVRMLYSHQLQADYCRQAPAWKGTWQDVKGHWWYVEACRQHAPKMTSAASVSF*
Ga0075017_1016482151	3300006059	Watersheds	MDPMPEPGDLIAAFSPQRGRYFRLVYGHQLQADHCRQPPAWKGQWQDVKGRWWYVEACRVHAPKL*
Ga0075019_101679281	3300006086	Watersheds	TVNSVSPMSEPGDLIAAFSPQPGRCFRMVLGHQLQADHCRRPPAWKGIWTDANGKSWSFESCRTHAPLVTSSPSERF*
Ga0075015_1000152362	3300006102	Watersheds	MPEPGALITAFSPQPGRCFRMVYSRQLQADHCRQPPAWKGQWQDVKGHWWYAEARREHAPKRF*
Ga0075015_1003088692	3300006102	Watersheds	MPKPGDLIVAFSPQPGRCFRMVYSRQLQATHCSEVPAWKGVWQDRSGKSWYVEACRQHARS*
Ga0075015_1005581361	3300006102	Watersheds	MPEPGDLITAFSPQPGRCFRMVYSQQIQADHCRQPPAWTGQWQDVKGSWWYVEACRQHAPRVTADAA*
Ga0075030_1005232091	3300006162	Watersheds	LITAFSPQPGRCFRMVYSRQLQADHCRQPPAWKGQWQDVKGHWWYAEARREHAPKRL*
Ga0075014_1009805351	3300006174	Watersheds	VPKPGDLITAFIPQPGRCVRMLYSHQLQADYCRQAPAWKGTWQDVKGHWWYVEACR
Ga0075522_102994012	3300006638	Arctic Peat Soil	MARMPEPGDPIPCSFAAIPGRCLRLIYSPQLQATHCYEPPVWKGIWKDRTGRSHYVEACHEHAPKAKEITP*
Ga0116214_10690181	3300009520	Peatlands Soil	LIEAFSPQPGRCFWMVYPVQLQATHCRGEPAWKGIWTGRKGARWYVEAGRDHAPKITSDASEGF*
Ga0116214_13269902	3300009520	Peatlands Soil	MDRMPEPGDLIEAFSPQPGRCFRMLQSRQLQATHCRQSPAWKGIWTDRKGASWYVEACRQHAPKPRTDG*
Ga0116218_14889721	3300009522	Peatlands Soil	MDPHPQPGDLIAAFSPQPGRCFRMVQSRQLQATHCRREPAWKWIRTDRKGSSWYVEA
Ga0116220_100102276	3300009525	Peatlands Soil	PDRTQVYGRPVDLMPEPGDLITAFSPQPGRCFRMVYSVQLQATHCRRPPGWRGIWTYSKDKSWYVEARRAHAPKLTSGVSESQPNG*
Ga0116220_100934853	3300009525	Peatlands Soil	VTEHTGYMPAPGDLIAAFSPQPGRCFRVVYSHQLQATHCRQEPAWKGQWRDPKGGTWYVEACRQHAPKLTSGSTEGF*
Ga0116117_11338551	3300009635	Peatland	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQSPAWKGVWRDAKGKSWYVEACRAHAPKATRHVAQ*
Ga0116110_12043882	3300009643	Peatland	MDRMPEPGDLITAFSPQPGQCFRMVYSRQLHSTHCRQRPAWKGMWKDVKGRSWYVEACREHAPK*
Ga0116106_11544712	3300009645	Peatland	PEPGDLIAAFSPQPGRCFRMVQSRQLQATHCYEPAAWKGVWRDRTGRSWYVEACREHAPKVTSGRSEGF*
Ga0116135_13251001	3300009665	Peatland	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPAWKGVWRDAKGKSWYAEACREH
Ga0116215_14215641	3300009672	Peatlands Soil	LAAGRAAAIYRLAVTPMPEPGDLIEAFSPLPGRCFRMVYSVQLQADHCRWPPAWKGVWRDRSGRSWYVEACRQHAPKMTNGTAEGF*
Ga0116216_100085358	3300009698	Peatlands Soil	MPGPGDLITAFSSPQPDRCFRMVYSVQLQATHCRQPPGWRGIWTYSKDKSWYVEACRVHAPKLTSGVSESQPNG*
Ga0116216_105198462	3300009698	Peatlands Soil	PMPEPGDLIEAFSPLPGRCFRMVYSVQLQADHCRWPPAWKGVWRDRSGRSWYVAACRQHAPKMTNGTAEGF*
Ga0116217_101157901	3300009700	Peatlands Soil	LAAGRAAAIYRLAVTPMPEPGDLIEAFSPLPGRCFRVVYSVQLQADHCRWPPAWKGVWRDRSGRSWYVEACRQHAPKMTNGTAEGF*
Ga0116217_102400781	3300009700	Peatlands Soil	GRPVDLMPEPGDLITAFSPQPGRCFRMVYSVQLQATHCRRPPGWRGIWTYSKDKSWYVEARRAHAPKLTSGVSESQPNG*
Ga0116217_105473011	3300009700	Peatlands Soil	MDRMPEPGDLITAFSPQPGRCFRMVYSHQLQADHCRQAPAWKGQWQDVKGRSWYVEACRRHAPKATSAPSEGS*
Ga0116217_110294161	3300009700	Peatlands Soil	MDRIPEPGNLITAFSPQPGRCFRMVDSHQLQADHCRRPPAWKGQWRNAKGRTWYVEACRKHAPKLTSDQSEGF*
Ga0136449_1001592534	3300010379	Peatlands Soil	VTPIPEPGDLIDAFCPQPGRCFRMVQSRQLQADHCRGEPAWKGIWGDAKGRSWYVEACRQHAPRLTGEEREGF*
Ga0136449_1001977117	3300010379	Peatlands Soil	VDRMPEPGDLIAAFSPQLGRCFRMVQSVQLQATHCRGEPAWKGIWRDRGGGRSWYVEACREHAPKARQI*
Ga0136449_1003020424	3300010379	Peatlands Soil	MDRMPEPGDLITAFSPQPGRCFRMVQSRQLQATHCRGEPAWKGVWRDRTGKSWYVEACREHAPKVTSGRSEDF*
Ga0136449_1005373741	3300010379	Peatlands Soil	MPDPGDLIAAFSPQPGRCFGMVYSVQLHADHCRQPPAWKGVSTDRKGNSWYVEACRQHAPELTSDQSEGF*
Ga0136449_1009427901	3300010379	Peatlands Soil	MDRMLEAGDLIAAFSPQPGRCFGMVYGHQLQADHCRQPQAWKGIWRDRKGASWYVEAYREHAPKARSDTTS*
Ga0136449_1018664591	3300010379	Peatlands Soil	MPEPGDLIAAFSPQPGRCFRMVQSRQLQADHCRGVPAWKGQWQDVKGRWWYVEACRQHAPKLMSGASEGF*
Ga0136449_1025520781	3300010379	Peatlands Soil	MDPMHEPGDLIAAFSPQPGRCFRMIQSRQLQATHCHREPAWKGIWTDRKGKGWYVEACREHAPKLTSGPAEGF*
Ga0136449_1045484051	3300010379	Peatlands Soil	VSPMPEPGDLIAAFSPQPGRCFRMVLGHQLQADHCREMPAWKGIWTDAKGKNWYVESCRTHAPLVTSSPSERF*
Ga0181518_101939882	3300014156	Bog	MAMPQPGDLVTAFSVRPGRCFRMIYDPKLQATHCRQPPAWKGIWRDAKGKSWYVEACREHAPKATRDVTR*
Ga0181521_105007591	3300014158	Bog	PGDVIAAFSPLPGRCFRMVLGHQLQADHRRGEPAWKGIHVDAKGKSWYV*
Ga0181521_105123511	3300014158	Bog	MPEPGDLIDAFSPLPGRCFRMVQSVQGQATHCRQEPAWKGQWRDAKGKSWYVESCRRHAPKLTSAASESF*
Ga0181530_104252201	3300014159	Bog	MAMPRPGDLIPYSFMAAPGRCCRMVYSAQLQAQHCSEAPVWKGIWKDRNGKSWYVQACAEHAPKWVREKMVG*
Ga0181530_104477411	3300014159	Bog	PGDLVTAFSVRPGRCFRMIYDPKLQATHCRQPPAWKGIWRDAKGKSWYVEACREHAPKATRDVTR*
Ga0181538_100245614	3300014162	Bog	MAMPQPGDLVTAFSVRPGRCFRMIYDPKLQATHCRQPPAWKGIWRDAKGKSWYVEACREHAPKAKRDVAQ*
Ga0181538_101482283	3300014162	Bog	RAMPEPGDLITAFSLQPGRHFRMVQSRLLQATHCRGTPASKGIRIDPKGKSWHAKWRGFFG*
Ga0181532_100185645	3300014164	Bog	MDRMPKPGDLIAAFSPQPGRCFRMVSVQLQATHCRGEPAWKGVWRDRAGQSWYVESCREHAPKVRTDASEGF*
Ga0181532_100536102	3300014164	Bog	MLDLMPEPGDLIAAFSPQPDRCFRMVQSRQLQATHCGQPPAWKGQWQDVKGSWWYVEACREHAPKVRSGAMEGF*
Ga0181532_101813602	3300014164	Bog	VTERTGYMLEPGHLIAAFSPQPGRCFRMVQARQLQATHCRGEPAWKGVWRDRAGRSWYVEACREHAPKPTGTVG
Ga0181532_104016531	3300014164	Bog	MPEPGDLIAAFSPQPGRCFRMVYSHQLQSDHCRGEPAWKGQWRDAKGRSWYVEACREHAPKVTSAASEGF*
Ga0181523_1000398914	3300014165	Bog	MDRMPEPGDLIAAFSPQPGRCFRMVSVQLQATHCRGEPAWKGVWRDRAGQSWYVESCREHAPKVRTDASEGF*
Ga0181528_102827712	3300014167	Bog	MAMPEPGDLVTAFSPRSGHCFRMVYSKKLQATHCRQPPAWKGVWTDVKGRSWYVEACADHAPKWVREMAS*
Ga0181531_102601633	3300014169	Bog	MDRMPVPGDLHGGFFIAPGRCFRMVYSDQLQATHCYEKPAWKGVWKDRKGRAWYVEACARHAPKVTLSA*
Ga0182018_102800821	3300014489	Palsa	MAMPQPGDLITAFSPQSGRCFRMVYSRQLQATHCHEPPAWKGIWKDAKGKSWYVEACREHASKLSRNP*
Ga0182015_100393704	3300014495	Palsa	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPSWKGVWRDAKGKSWYAEACREHAPKAKPSA*
Ga0182015_108689511	3300014495	Palsa	GGFFIAPGRCFRMVYSDQLQATHCYEKPAWKGIWKDRKGRAWYVEACPKHAPKMALSA*
Ga0182024_101785894	3300014501	Permafrost	VVGSKRTHPPGTVAPMAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYLEACREHAPKARRDVA*
Ga0182024_106294201	3300014501	Permafrost	MAMPQPGDLLTAFSPQPGRCHKMVYSRQLQATHCRLPPVWKGIFRDAKGKSWYVEACA
Ga0182024_110826262	3300014501	Permafrost	MDRMPEPGDLQRGFFIAPGRCFRMVYSRQLQATHCYESPARRGVWRDAKGRSHYAEACREHAPKATRD*
Ga0182024_114252401	3300014501	Permafrost	IPQPGDPITAFSVQPGRCFRMIYDHKLQATHCRQSPAWKGVWRDAKGKSWYVEACRAHAPKATHHVA*
Ga0182024_118304392	3300014501	Permafrost	FSVQPGRCFRMIYDHKLQATHCRQPPAWKGGWRDTKGKSWYVEACREHAPKLRSASVF*
Ga0182024_126505211	3300014501	Permafrost	MPVPGDLHGGFFIAPGRCFRMIYSDQLQATHCYEQPVWKGIWKDRKGKRWYVEACREHAPKAARRG*
Ga0181536_104541692	3300014638	Bog	MAMPQPGDLITAFSVRRGRCFRMICDPKLQATHCPQAPAWKGIWRDAKGKSWYVEACREHAPKAKRDVAQ*
Ga0181516_101865882	3300014655	Bog	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPSWKGIWRDAKGKSWYAEACREHAPKSTPSA*
Ga0182030_1000051857	3300014838	Bog	MAMPQPGDLITAFSVQSGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYVEACRDHAPKATRDVA*
Ga0182030_102568323	3300014838	Bog	MAMPQPGDLITAFSPQPGRCFRMVYSRQLQATHCRQPPAWKGIWRDAKGKSWYVEACRDHAPKWVREMAG*
Ga0181505_100815154	3300016750	Peatland	MDRMPEPGDLIAAFSPQPGRCFRMVSVQLQATHCRGEPAWKGVWRDRAGQSWYVESCREHAPKVRTDASEGF
Ga0187814_100267312	3300017932	Freshwater Sediment	MDPGDLIVAFSPQPGRCFRMVYSVQLQADHCRRPPAWKGQWRVPKGRSWYVEACRKHAPKLTSGASEGF
Ga0187808_101226691	3300017942	Freshwater Sediment	MPEPGDLITAFSPQPPGRCFRMVYSHQLQAIHCSEPPAWKGVWRDRTGKSWYVEACGEHAPRASNQSWTSG
Ga0187879_100054232	3300017946	Peatland	VTRTPEPGDLIAAFSPQPGRCFRMVQSRQLQATHCYEPAAWKGVWRDRTGRSWYVEACREHAPKVTSGRSEGF
Ga0187879_104416521	3300017946	Peatland	MPEPGDLIAAFSPQPGRCFRMVYSHQLQSDHCRGEPAWKGQWRDAKGRSWYVEACREHAPKVTSAASEGF
Ga0187817_101106242	3300017955	Freshwater Sediment	MPEPGDLITAFSPQPPGRCFRMVYSHQLQAIHCSEPPAWKGVWRDRTGKSWYVEACGEHAPRASNQSWTSGPKAVRP
Ga0187884_102404311	3300018009	Peatland	VTRTPEPGDLIAAFSPQPGRCFRMVQSRQLQATHCYEPAAWKGVWRDRTGRSWYVEACREHAPKVTSGRSEG
Ga0187884_102476582	3300018009	Peatland	MAMPQPGDLVTAFSVRPGRCFRRIYDPKLQATHCRQPPAWKGIWRDAKGKSWYVEACREHAPKAKRDVAQ
Ga0187885_102071582	3300018025	Peatland	MAMPQPGDLITAFSVQAGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYVEACREHAPKARRDVA
Ga0187885_105362831	3300018025	Peatland	MDRMPEAGDLIVAFSPQPGRCFRMVQSRQLQATHCRQEPAWKGQWQDVKGGWWYVEACREHAPKPTGDVAEGF
Ga0187867_105131461	3300018033	Peatland	MPVPGDLITAFSPQPGRCFRMVYSRQLQATHCRQPPAWRGVWRDVKGKSWYVEACREHAPRATRDVAS
Ga0187862_100647702	3300018040	Peatland	VGRLGLILFRLPSNRVDPMPEPGDLIAAFSPQPVRCFRMVQSVHLQATHCRQEPAWKGLWRDRTGKSWYVEACREHAPKVTSRAGEGF
Ga0187862_105314801	3300018040	Peatland	MSEPGDLTAAFSPQLGRCFRMVQSRQLQATHCGREPAWKGQWRDAKGRTWYVEACRDHAPKAPDQY
Ga0187887_104596282	3300018043	Peatland	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPAWRGVWRDVKGKSWYVEDCREH
Ga0187887_109371522	3300018043	Peatland	VKWSPTHPPGTVTPMAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQSPAWKGVWRDAKGKSWYVEACRAHAPNATRHVAQ
Ga0187859_106286471	3300018047	Peatland	EPGDLITAFIPQPGRCFRMVQSRQLQATHCRGEPAWKDVWRDVKGRTWYVEACREHAPKVTSGRSEGY
Ga0187858_103064741	3300018057	Peatland	TAFSVRRGRCFRMIYDPKLQATHCPQAPAWKGIWRDAKGKSWYVEACREHAPKLRSRLPE
Ga0224558_10322342	3300023090	Soil	MAMPQPGDLITAFSVRRGRCFRMIYDPKLQATHCRQAPAWKGIWRDAKGKSWYVEACREHAPKAKRDVAQ
Ga0224557_12399822	3300023101	Soil	MDRMPVPGDLHGGFFIAPGRCFRMIYSDQLQATHCDEPPAWKGVWRDAKGKRWYVEACRKHSPKVALSA
Ga0208043_11008853	3300027570	Peatlands Soil	VTEHTGYMPAPGDLIAAFSPQPGRCFRVVYSHQLQATHCRQEPAWKGQWRDPKGGTWYVEACRQHAPKLTSGSTEGF
Ga0209530_11865401	3300027692	Forest Soil	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPAWKGVWRDAKGKSWYAEACREHVPKATPSA
Ga0209415_102771164	3300027905	Peatlands Soil	MPEPGDLIAAFSPQPGRCFRMVQSRQLQADHCRLPPAWKGQWQDGRGHWWYVEACRQHAPKVGSGPAEGF
Ga0311340_102456472	3300029943	Palsa	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPSWKGVWRDAKGKSWYAEACREHAPKAKPSA
Ga0311339_106658622	3300029999	Palsa	MAMPQPGDLITAFSPQSGRCFRMVYSRQLQATHCHESPAWKGIWKDAKGKSWYVEACREHAPQLCGE
Ga0311353_110224931	3300030399	Palsa	DLITAFSPQSGRCFRMVYSRQLQATHCHESPAWKGIWKDAKGKSWYVEACREHAPQLCGE
Ga0310037_100591761	3300030494	Peatlands Soil	GRPVDLMPEPGDLITAFSPQPGRCFRMVYSVQLQATHCRRPPGWRGIWTYSKDKSWYVEARRAHAPKLTSGVSESQPNG
Ga0311370_111215291	3300030503	Palsa	VVGRKRTHPPGTVAPMAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYVEACREHAPKARRDVA
Ga0302325_112896113	3300031234	Palsa	RMPAPGHIITAFSPQPGRCFRMIYSRQLQATHCYEPPAWKGIWKDWKGRSWYVEACWEHAPKWVGPKS
Ga0302324_1005076902	3300031236	Palsa	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYVEACREHAPKARRDVA
Ga0302324_1010057111	3300031236	Palsa	MDRMPEPGDLITAFSPQPGRCFRMIYSRQLQATHCYEPPAWKRIWRDRKGRSWYVEACAEHAPKW
Ga0311301_1003294610	3300032160	Peatlands Soil	LRLGVPSVPMDGMPQPGEPCPGFIAEPGRCWRMLYSHQLQATHCRQEPAWKGIWTDRKGKGWYVEACRQHAPKLTSAASEGF
Ga0311301_100421642	3300032160	Peatlands Soil	MPEPGDLITAFSPQPGRCFRMVYSVQLQATHCRRPPGWRGIWTYSKDKSWYVEARRAHAPKLTSGVSESQPNG
Ga0311301_100596302	3300032160	Peatlands Soil	VTPMPDPGDLIAAFSPQPGRCFGMVYSVQLHADHCRQPPAWKGVSTDRKGNSWYVEACRQHAPELTSDQSEGF
Ga0311301_100765343	3300032160	Peatlands Soil	MDRMPEPGDLIEAFSPQPGRCFRMLQSRQLQATHCRQSPAWKGIWTDRKGASWYVEACRQHAPKPRTDG
Ga0311301_100942935	3300032160	Peatlands Soil	MPEPGDIVTAFSPQPGRCFRMVYSVQLQADHCRQPPAQKGVWRDRKGQSWYVEACREHAPKISSDSPDGI
Ga0311301_100946502	3300032160	Peatlands Soil	MDRMPEPGDLITAFSPQPGRCFRMVYSHQLQADHCRQAPAWKGQWQDVKGRSWYVEACRRHAPKATSAPSEGS
Ga0311301_101207773	3300032160	Peatlands Soil	VDRMPEPGDLIAAFSPQLGRCFRMVQSVQLQATHCRGEPAWKGIWRDRGGGRSWYVEACREHAPKARQI
Ga0311301_101334026	3300032160	Peatlands Soil	MPEPGDLMAAFSPHPGRCFRMVQSRLLQATHCYKPPAWNGQWRDAKGRSWYVEACREHAPRLSSDASEGF
Ga0311301_102049673	3300032160	Peatlands Soil	MDRMPEPGDLITAFSPQPGRCFRMVQSRQLQATHCRGEPAWKGVWRDRTGKSWYVEACREHAPKVTSGRSEDF
Ga0311301_103570773	3300032160	Peatlands Soil	LAAGRAAAIYRLAVTPMPEPGDLIEAFSPLPGRCFRMVYSVQLQADHCRWPPAWKGVWRDRSGRSWYVEACRQHAPKMTNGTAEGF
Ga0311301_105536473	3300032160	Peatlands Soil	VTERTGYMLEPGHLIAAFSPQPGRCFRMVQARQLQATHCRGEPAWKGVWRDRAGRSWYVEACREHAPKPTGTVGTA
Ga0311301_106274031	3300032160	Peatlands Soil	YGRPVDLMPGPGDLITAFSPQPGRCFRMVYSVQLQATHCRQPPGWRGIWTYSKDKSWYVEACRAHAPKLTSGVSESQPNG
Ga0311301_111509312	3300032160	Peatlands Soil	TLGPVSPMPEPGDLIEAFSPQPGRCFRMVQSRQLQATHCRGEPAWKGIWTDRKGARWYVEACGEHAPRLSSDESEGF
Ga0311301_112314651	3300032160	Peatlands Soil	MDRMLEAGNLIAAFSPQPGRCFRMVYGHQLQADHCRQPQAWKGIWRDRKGASWYVEAYREHAPKARSDTTS
Ga0311301_121758081	3300032160	Peatlands Soil	MPQPGDLIDAFSPQPGRCFRMVQSVQLQATHFRGEPAWKGIWTDRKGNGWYVEACRQHAPKPPTDPC
Ga0311301_123130292	3300032160	Peatlands Soil	MPEPGDLIEAFSPQPGRCFRMVQSRQLQADHCRGEPAWKGIWTDRKGAKWYVEACRQHAP
Ga0334790_231125_267_512	3300033887	Soil	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRQPPAWKGVWRDVKGKSWYVEACREHAPKSAGARSSEQEAIERSGTD
Ga0370515_0095780_700_909	3300034163	Untreated Peat Soil	MAMPQPGDLITAFSVQPGRCFRMIYDHKLQATHCRRPPAWKGVWRDAKGKSWYVEACPEHAPKARRDVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072618

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences