Metagenome Family F072614

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072614
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	94 residues
Representative Sequence	MKVSIFVFILAVLAAGSVGAHENGASSATSEAVSITDQADQIFERAIDERTIGRLGLFNRSDDTSSGRYSVSLDLESEDSDWNFEVTVTMEF
Number of Associated Samples	103
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	26.67 %
% of genes near scaffold ends (potentially truncated)	37.19 %
% of genes from short scaffolds (< 2000 bps)	77.69 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.223 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.33% β-sheet: 18.33% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF10099	RskA	29.75
PF13432	TPR_16	7.44
PF08281	Sigma70_r4_2	5.79
PF07719	TPR_2	4.96
PF04909	Amidohydro_2	2.48
PF14224	DUF4331	2.48
PF04545	Sigma70_r4	1.65
PF13414	TPR_11	0.83
PF14559	TPR_19	0.83
PF13181	TPR_8	0.83
PF16798	DUF5069	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	32.23 %
Unclassified	root	N/A	4.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32.23 %
Unclassified	root	N/A	4.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	16.53 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	9.92 %
Unclassified	root	N/A	4.13 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.31 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.83 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	16.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.92 %
Unclassified	root	N/A	4.13 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.31 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.83 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	16.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.92 %
Unclassified	root	N/A	4.13 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.83 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.83 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	15.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.92 %
Unclassified	root	N/A	4.13 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.83 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	12.40 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	9.92 %
Unclassified	root	N/A	4.13 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.83 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.83 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.83 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17354717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2835	Open in IMG/M
2088090014\|GPIPI_17354718	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
2088090014\|GPIPI_17424361	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1455	Open in IMG/M
2088090015\|GPICI_8887286	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
2166559005\|cont_contig00218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4862	Open in IMG/M
3300000891\|JGI10214J12806_11459627	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300000955\|JGI1027J12803_100149759	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300000956\|JGI10216J12902_100214871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300000956\|JGI10216J12902_104311072	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300001431\|F14TB_100251490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300002899\|JGIcombinedJ43975_10007734	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300002899\|JGIcombinedJ43975_10038948	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300003911\|JGI25405J52794_10017529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1423	Open in IMG/M
3300004114\|Ga0062593_103535398	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300004480\|Ga0062592_102586712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300004643\|Ga0062591_100165862	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300004643\|Ga0062591_102069394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300005093\|Ga0062594_100314281	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300005093\|Ga0062594_101415231	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005186\|Ga0066676_10176191	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005289\|Ga0065704_10027909	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300005289\|Ga0065704_10718995	Not Available	554	Open in IMG/M
3300005290\|Ga0065712_10139914	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300005290\|Ga0065712_10372383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300005293\|Ga0065715_10520758	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005293\|Ga0065715_10819428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300005294\|Ga0065705_10064668	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005332\|Ga0066388_100000214	All Organisms → cellular organisms → Bacteria	24107	Open in IMG/M
3300005339\|Ga0070660_101665866	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005340\|Ga0070689_102241013	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005347\|Ga0070668_100128210	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300005355\|Ga0070671_101122341	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005355\|Ga0070671_101413260	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005365\|Ga0070688_100127293	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300005439\|Ga0070711_101055476	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005445\|Ga0070708_100741543	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005455\|Ga0070663_100186452	All Organisms → cellular organisms → Bacteria	1612	Open in IMG/M
3300005467\|Ga0070706_100285542	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300005468\|Ga0070707_100164558	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300005471\|Ga0070698_100000950	All Organisms → cellular organisms → Bacteria	31694	Open in IMG/M
3300005548\|Ga0070665_100300289	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300005614\|Ga0068856_100692861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300005764\|Ga0066903_105218209	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005937\|Ga0081455_10008225	All Organisms → cellular organisms → Bacteria	10878	Open in IMG/M
3300005937\|Ga0081455_10010443	All Organisms → cellular organisms → Bacteria → Proteobacteria	9423	Open in IMG/M
3300006175\|Ga0070712_100160810	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300009147\|Ga0114129_12136527	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300009162\|Ga0075423_10582599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1179	Open in IMG/M
3300009553\|Ga0105249_11281533	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300010043\|Ga0126380_10497072	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	935	Open in IMG/M
3300010360\|Ga0126372_10179945	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300010375\|Ga0105239_11068990	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010376\|Ga0126381_100862816	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300010396\|Ga0134126_12619256	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010398\|Ga0126383_12758121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300010400\|Ga0134122_10162200	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300012198\|Ga0137364_10437786	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012200\|Ga0137382_11098019	Not Available	568	Open in IMG/M
3300012203\|Ga0137399_10465841	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012208\|Ga0137376_10141063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2068	Open in IMG/M
3300012208\|Ga0137376_10962863	Not Available	732	Open in IMG/M
3300012354\|Ga0137366_10104963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2140	Open in IMG/M
3300012360\|Ga0137375_10942358	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012925\|Ga0137419_10133725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1770	Open in IMG/M
3300012929\|Ga0137404_10508018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1076	Open in IMG/M
3300012930\|Ga0137407_10730764	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300012930\|Ga0137407_12137541	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012948\|Ga0126375_11412317	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012971\|Ga0126369_10535549	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300012972\|Ga0134077_10497360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300013297\|Ga0157378_10472561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1248	Open in IMG/M
3300013308\|Ga0157375_13072309	Not Available	557	Open in IMG/M
3300015371\|Ga0132258_10314810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3855	Open in IMG/M
3300015371\|Ga0132258_10746125	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2466	Open in IMG/M
3300015371\|Ga0132258_12151666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1401	Open in IMG/M
3300015373\|Ga0132257_100316472	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300015374\|Ga0132255_101495418	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300018027\|Ga0184605_10019724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2689	Open in IMG/M
3300018028\|Ga0184608_10135627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1053	Open in IMG/M
3300018051\|Ga0184620_10258438	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300018052\|Ga0184638_1141192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	873	Open in IMG/M
3300018061\|Ga0184619_10013082	All Organisms → cellular organisms → Bacteria	3302	Open in IMG/M
3300018066\|Ga0184617_1141001	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300018076\|Ga0184609_10014501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3014	Open in IMG/M
3300018431\|Ga0066655_10535556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300019356\|Ga0173481_10591049	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300019789\|Ga0137408_1308557	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300019866\|Ga0193756_1033809	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300019868\|Ga0193720_1013248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1153	Open in IMG/M
3300019872\|Ga0193754_1019512	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300019874\|Ga0193744_1003746	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300019877\|Ga0193722_1000700	All Organisms → cellular organisms → Bacteria	7664	Open in IMG/M
3300019879\|Ga0193723_1004114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5056	Open in IMG/M
3300019885\|Ga0193747_1010108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2270	Open in IMG/M
3300020006\|Ga0193735_1027712	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300020006\|Ga0193735_1137804	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300020021\|Ga0193726_1153700	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300020199\|Ga0179592_10111389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1257	Open in IMG/M
3300021078\|Ga0210381_10064202	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300021178\|Ga0210408_10199040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1593	Open in IMG/M
3300021510\|Ga0222621_1064430	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300022534\|Ga0224452_1037827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1410	Open in IMG/M
3300022756\|Ga0222622_10010423	All Organisms → cellular organisms → Bacteria	4386	Open in IMG/M
3300022756\|Ga0222622_10252341	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300022892\|Ga0247753_1055590	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025903\|Ga0207680_10972186	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300025910\|Ga0207684_10102082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2452	Open in IMG/M
3300025930\|Ga0207701_10026468	All Organisms → cellular organisms → Bacteria	5508	Open in IMG/M
3300025930\|Ga0207701_10487367	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300025961\|Ga0207712_11034789	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300026324\|Ga0209470_1018495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	3830	Open in IMG/M
3300026557\|Ga0179587_10118315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1623	Open in IMG/M
3300028379\|Ga0268266_10055497	All Organisms → cellular organisms → Bacteria	3406	Open in IMG/M
3300028814\|Ga0307302_10392162	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300028824\|Ga0307310_10264189	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300028878\|Ga0307278_10501325	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300028881\|Ga0307277_10130812	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300031231\|Ga0170824_121480744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1334	Open in IMG/M
3300032075\|Ga0310890_10906916	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300033412\|Ga0310810_10017556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	8563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.55%
Host-Associated	Host-Associated	25.62%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.64%
Plants	Host-Associated → Plants	25.62%
Aquatic	Environmental → Aquatic	9.92%
Modeled	Engineered → Modeled	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.40%
Sediment	Environmental → Aquatic → Sediment	9.09%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.72%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.26%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.31%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019872	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03498770	2088090014	Soil	MPAAYYGHLKASIFIFILAALAAGSVVAQEKGASSATAEAVSITDQAHQIFERVIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNVEVTVSMEF
GPIPI_03194480	2088090014	Soil	MKVSIFVFILAVLAAGSVGAHENGASSATSEAVSITDQADQIFERAIDERTIGRLGLFNRSDDTSSGRYSVSLDLESEDSDWNFEVTVTMEF
GPIPI_02681570	2088090014	Soil	MTAAYRGHMKLSIFVFILTVLAAGSVGAHENGASSATSEAVSITDQADRIFERAIDERTIGRLGLFDRSEDERSGRYSVSLDVENEDSDWNFEVSVTLEF
GPICI_00991250	2088090015	Soil	LKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVAVTMEF
cont_0218.00000060	2166559005	Simulated	LKAIIVIFILAVLAAESVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDGSSRYGISLDLENEDGDWNFEVTVTMEF
JGI10214J12806_114596272	3300000891	Soil	RPALSLASVRAKHPRGCLQRITGHLKAYIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSLTDRADQIFERVIDERIIDRLGLFDRSDDGAARYGISLDVENEDGDWNFEVTVTMEF*
JGI1027J12803_1001497591	3300000955	Soil	RRITGHLKTSIFIFTLAVLGVRSVVAHETGASFATAEAVAITDQAHHIFERAIDERIIDRLGLFDRPDDGGSGRYNVSLDLENEDSDWSFEISVTVEF*
JGI10216J12902_1002148712	3300000956	Soil	VLAAGSVVAEEKIASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVTVTMEF*
JGI10216J12902_1043110722	3300000956	Soil	MLAAGLVVAQENSASSSPTSATEEAVSITDQADQIFERAINERIIDRLGLFDRSEDGASGGYSVSLDLENEDSDWSFEITVTMEF*
F14TB_1002514901	3300001431	Soil	VLAAGAVVAEENVASPSATSVTAEAVLIPDQADQMFERVIDERIIDRLGLFDRSDDGGSGHYDISLDLENEDGDWNFEVTVTMEF*
JGIcombinedJ43975_100077342	3300002899	Soil	VSLEGVRTKHPGGCLRRITGHLKTSIFIFTLAVLGVRSVVAHETGASFATAEAVAITDQAHHIFERAIDERIIDRLGLFDRPDDGGSGRYNVSLDLENEDSDWSFEISVTVEF*
JGIcombinedJ43975_100389482	3300002899	Soil	AHENGASSATSEAVSITDQADQIFGRAIDERTIGRLGLFNRSDDNSSGRYSVSLDLENEDSDWNFEVSVTLEF*
JGI25405J52794_100175292	3300003911	Tabebuia Heterophylla Rhizosphere	MLAALATGSIVAHENGASSAATEGLSITDQTHQIFERVIDERLIDRLGLFDRPDEASGRYDISLNLEKEDSEWNFEVTITVEF*
Ga0062593_1035353982	3300004114	Soil	MTAAYRGHMKLSIFVFILTVLAAGSVGAHENGASSATSEAVSITDQADRIFERAIDERTIGRLGLFDRSEDERSGRYSVSLDVENEDSDWNFEVSVTLEF*
Ga0062592_1025867121	3300004480	Soil	SLASVRAKHPRGCLQRITGHLKAYIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSLTDRADQIFERVIDERIIDRLGLFDRSDEGAARYGISLDVENEDGDWNFEVTVTMEF*
Ga0062591_1001658622	3300004643	Soil	MTAAYRGHMKVSIFVFILAVLAAGSVGAHENGASSARSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYSVSLDLENEDSDWNFEVSVTLEF*
Ga0062591_1020693941	3300004643	Soil	RITGHLKAYIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSLTDRADQIFERVIDERIIDRLGLFDRSDDGAARYGISLDVENEDGDWNFEVTVTMEF*
Ga0062594_1003142812	3300005093	Soil	MTAAYRGHMKVSIFVFILTVLAAGSVGAHENGASSATSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYGVSLDLESEDSDWNFEVTVTMEF*
Ga0062594_1014152312	3300005093	Soil	MLSPANERKHPDKWPRRITGHLKTSIYIFILAVFAAGSVVAHENSASPATRVAASISNQADQIFERAIDERIIDRLGLFDRSDEGSSHYEISLDLENEDSDWSFEVTVTVQF*
Ga0066676_101761912	3300005186	Soil	VLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVTVTMEF*
Ga0065704_100279092	3300005289	Switchgrass Rhizosphere	LSLASVRAKHPRGCLQRITGHLKASIFIFILAVLAAGSMVAEEKVASPSATSVTAKTVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVTVTMEF*
Ga0065704_107189951	3300005289	Switchgrass Rhizosphere	VFILAVLAAGSVGAHENGASSATSEAVSITDQADQIFGRAIDERTIGRLGLFNRSDDNSSGRYSVSLDLENEDSDWNFEVSVTLEF*
Ga0065712_101399143	3300005290	Miscanthus Rhizosphere	VLAAGSVVAEEKVASPSATSVPAKAVSITDQADQIFERAIDERIIDRLGLFDRSDNGSTRYRISLDLENEDGDWNFEVTVTMEF*
Ga0065712_103723832	3300005290	Miscanthus Rhizosphere	VSGERHPCGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0065715_105207582	3300005293	Miscanthus Rhizosphere	MTAAYRGHMKVRIFVFILAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIEERIIGRLGLFDRSEDGSGRYSVSLDLENEDSDWNFEITVTMEF*
Ga0065715_108194282	3300005293	Miscanthus Rhizosphere	AYDWRCRWRVSGERHPCGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0065705_100646682	3300005294	Switchgrass Rhizosphere	VLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFGRSDDGASSYGISLDLENEDGDWNFEVTVTMEF*
Ga0066388_1000002149	3300005332	Tropical Forest Soil	LKASIYIFILAVLGAGSVVGHENGSSSATAAAVSITHQGHQIFERTIDERIIDRLGLLDRSDQGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0070660_1016658662	3300005339	Corn Rhizosphere	MLSPANERKHPDKWPRRITGHLKTSIYIFILAVFAAGSVVAHENSASPATRVAASISNQADQIFERAIDERIIDRLGLFDRSDEGSSHYEISLDLENEDSDWSFE
Ga0070689_1022410132	3300005340	Switchgrass Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGMFDRSDDGASRYGVSLDLENEDGDWNFEITV
Ga0070668_1001282102	3300005347	Switchgrass Rhizosphere	VLSAGAVVAQENSASSSLTSATAEAVAITDQADQIFERVIDERIIDRLGLFDRSDDGSGRYDISLDLENEDGEWSFEVTVTMEF*
Ga0070671_1011223411	3300005355	Switchgrass Rhizosphere	MTAAYRGHMKVRIFVFILAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIEERIIGRLGLFDRSEDGSGRYSVSLDLENEDSDWNFEITVTMEFQRH*
Ga0070671_1014132601	3300005355	Switchgrass Rhizosphere	AEEKVASPSATSVAAKAVSITGQADRIFERAIDERTIDRLGMFDRSDDGVSRYGVSLDLENEDGDWNFEITVTMEF*
Ga0070688_1001272932	3300005365	Switchgrass Rhizosphere	LKANIFIFILAVLAVRSVIAHENGASSATAEAVSITNQADQIFERAIDERIIDRLGLFDRSDDGSGRYSVALDLENEDSDWSFEVTVTMEF*
Ga0070711_1010554761	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VFILAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIDERIIDRLGLFDRSDDSAARYGISLDLENEDGDWNFEVTVTMEF*
Ga0070708_1007415432	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	HPRGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0070663_1001864521	3300005455	Corn Rhizosphere	ILIFIMAVFAAGSVVAEEKVASPSATSVAAKAVSITGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0070706_1002855422	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSGERHPRGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0070707_1001645582	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLAAGSVVAEEKVASPCATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0070698_10000095027	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF*
Ga0070665_1003002892	3300005548	Switchgrass Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKAVSITGQADRIFERAIDERTIDRLGMFDRSDDGVSRYGVSLDLENEDGDWNFEITVTMEF*
Ga0070664_1015642132	3300005564	Corn Rhizosphere	KVVSRKKRDPSCSSVAPEIVRNHPTVRPALSLASVRAKHPRGCLRRITGHLKANILIFIMAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0068856_1006928611	3300005614	Corn Rhizosphere	FAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGMFDRSDDGASRYGISLDLENEDGDWNFEITVTMEF*
Ga0066903_1052182091	3300005764	Tropical Forest Soil	VLGAGSVVGHENGSSSATAAAVSITHQGHQIFERAIDERIINRLGLLDRSDEGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0081455_100082257	3300005937	Tabebuia Heterophylla Rhizosphere	MVAVLATGSIVAYENGASSATTEGLSITDQTHQIFERVIDERLIDRLGLFDRPDEASGRYDISLNLEKEDSEWNFEVTITVEF*
Ga0081455_100104439	3300005937	Tabebuia Heterophylla Rhizosphere	MLAALATGSIVAHENGASSAATEGLSITDQTHQIFERVSDERLIDRLGLFDRPDEASDRYDISLDLEKEDGEWSFEVTITVEF*
Ga0070712_1001608102	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GCPQRITGHLKASILIFIMAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0114129_121365271	3300009147	Populus Rhizosphere	IFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSLTDQADQIFERVIDERIIDRLGLFERSDEGAARYGISLDVENEDGEWNFEVTVTMEF*
Ga0075423_105825992	3300009162	Populus Rhizosphere	MAAAYRGHMKVSIFVFVLAILAAGSVVAEDNGSSFSPTSATAEAGFNHDYGDNQIAECAIDERIIDRLGLFDRVDDDSAGYSISLDLENEDSDWSFEVTVTMEF*
Ga0105249_112815331	3300009553	Switchgrass Rhizosphere	LTVLAAGSVGAHENGASSATSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYGVSLDLESEDSDWNFEVTVTMEF*
Ga0126380_104970722	3300010043	Tropical Forest Soil	LKASIYIFILAVLGAGSVVGHENGSSSATAAAVSITHQEHQIFERTIDERIIDRLGLLDRSDQGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0126372_101799451	3300010360	Tropical Forest Soil	DHLKASIYIFILAVLGAGSVVGHENGSSSATAAAVSITHQGHQIFERTIDERIIDRLGLLDRSDQGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0105239_110689902	3300010375	Corn Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKTVSMTDQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0126381_1008628162	3300010376	Tropical Forest Soil	LKVSIFIFVLGMLMAGSVVGHENDSSSATAAAVSITHQGHQIFERTIDERIIDRLGLLDRSDQGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0134126_126192561	3300010396	Terrestrial Soil	MAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLGLENEDGDWNFEIT
Ga0126383_127581211	3300010398	Tropical Forest Soil	LKLRIFILILAILAARSVVAHEDGAASATAKAVSITNQADQIFEHAIDERIIDRLGLFDRSDDGSGRYEISLDLENEDSDWSFQVTFTMEF*
Ga0134122_101622002	3300010400	Terrestrial Soil	MAVFAAGSVVAEEKVAPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLGLENEDGDWNFEITVTMEF*
Ga0137364_104377861	3300012198	Vadose Zone Soil	MTAAYRGHMKVSIFVFVLAVLTAGPVGAHENGASSAAPEAVSITDQADQIFEHEIDERTIGRLGLFDRSDDNSSGRYSVSLDLENEDSDWSFEVTVTMEF*
Ga0137382_110980191	3300012200	Vadose Zone Soil	AVLAAGSIVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERTVGRLGLFDRSDDNSSGRYSVSLDLENEDSDWNFEVSVTMEF*
Ga0137399_104658411	3300012203	Vadose Zone Soil	LKASIFIFILAMLAAGSVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDVSSRYGISLDLENEDGDWNFEVTVTMEF*
Ga0137376_101410631	3300012208	Vadose Zone Soil	VLSAGAVVAQESSASSSPTSATAEAVSITDQADQIAERVIDERIIDRLGLFDRSDGGGSGHYSVSLDLENEDSDWSFEVTVTMEF*
Ga0137376_109628631	3300012208	Vadose Zone Soil	LKASIFNFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERTIGRLGLFDRSDDNSSGRCSVSFDLENEDSDWNFEVTVTMEF*
Ga0137366_101049632	3300012354	Vadose Zone Soil	LKASIFIFILAVLAAGSIVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISVDLENEDGDWNFEVTVTMEF*
Ga0137375_109423581	3300012360	Vadose Zone Soil	MTAAYRGPMKVSIFVLILAVLTAGSVGAHENGASSATKETVSITGQADQIFERGIDQRTIGRLGLFDRSEDDGSGRYSVSFDLENEDSDWNFEVSVTMEF*
Ga0137419_101337252	3300012925	Vadose Zone Soil	LKGSIFIFILAMLAAGSVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDVSSRYGISLDLENEDGDWNFEVTVTMEF*
Ga0137404_105080182	3300012929	Vadose Zone Soil	MTTAYRGHMQVSIFVFILAVLAAGSVGAHENGASSATAEAVSITGHADQIFERAIDERIIGRLGLFDRPDDNSSGRYSVSFDLENEDSDWNFEVTVTMEF*
Ga0137407_107307642	3300012930	Vadose Zone Soil	MQVSIFVFILAVLAAGSVGAHENGASSATKETVSITDQTDRIFERAIDERTIGRLGLFDRSDDNSSGRCSVSFDLENEDSDWNF
Ga0137407_121375412	3300012930	Vadose Zone Soil	MTAAYRGHMKVSIFVFILAVLAAGSVGAHENGASSATAEAVSITGHADQIFERAIDERIIGRLGLFDRPDDNSSGRYSVSFDLENEDSDWNFEVTVTMEF*
Ga0126375_114123172	3300012948	Tropical Forest Soil	VLAVVAAGSVVGHENGASSAKAEAMSIADQGHQMFEHIIDQRIIDRLGVFDRSDEGSGRYSVSLNVEKEDSDWNFEVTVTMEF*
Ga0126369_105355492	3300012971	Tropical Forest Soil	LKTSILIFVLAVLAAGSVVGHENGASSAKAEAMSIADQGHQMFEHIIDQRIIDRLGVFDRSDEGSGRYSVSLNVEKEGSDWNFEVTVTVDF*
Ga0134077_104973601	3300012972	Grasslands Soil	LKASIFNFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGAARYGISLDLENEDGDWNFEVTVTMEF*
Ga0157378_104725612	3300013297	Miscanthus Rhizosphere	MAVFAAESVVAEEKVASPSATSVAAKAVSITGQADRIFERAIDERTIDRLGMFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0157375_130723092	3300013308	Miscanthus Rhizosphere	MKVSIFVFILAVLAAGSVGAHENGASSARSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYGVSLDLESEDSDWNFEVTVTMEF*
Ga0132258_103148107	3300015371	Arabidopsis Rhizosphere	MTAAYRGHMKVSIFVFIVAVLNAGSVGAHESGASSATSEGVSITDEADQIFERAVDERISRLGLFDRSEDGSGRYGVSLDLENEDSDWNFEVTITVEF*
Ga0132258_107461252	3300015371	Arabidopsis Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKTVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF*
Ga0132258_121516662	3300015371	Arabidopsis Rhizosphere	MTAAYRGHMKVSIFVFILAVLAAGSVGAHENGASSATSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYGVSLDLESEDSDWNFEVTVTMEF*
Ga0132257_1003164724	3300015373	Arabidopsis Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGLFDRSDDGASRYGVSLDLENEDGDWNFEITV
Ga0132255_1014954181	3300015374	Arabidopsis Rhizosphere	VSIFVFILAVLAAGSVGAHENGALSATSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYGVSLDLESEDSDWNFEVTVTMEF*
Ga0184605_100197243	3300018027	Groundwater Sediment	MTAAYRGHMQVSIFVFILAVLAAGSVGAHENGASSATKATVSITDQTDQIFERAIDERTIGRLGLFDRSDDNSSGRCSVSFDLENEDSDWNFEVTVTVEF
Ga0184608_101356272	3300018028	Groundwater Sediment	MTAAYRGHMKLGIFVFILAVLAAGSVGAHENGALSATSEAVSITDQADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLESEDSDWNFEVTVTMEF
Ga0184620_102584381	3300018051	Groundwater Sediment	MTAAYRGHMKLGIFVFTLAVVAAGSVGAHENGASSATKKTVSITDQTDQIFERAIDERIIGRLGLFDRPEDGSGRYSVSRDLENEDSDWNFEVTVTMEF
Ga0184638_11411922	3300018052	Groundwater Sediment	MTAAYRGHMKVSIFVFILAVLAAGSVRAHENGASSATKETVSITDQADRIFERAIDERTIGRLGLFDRSEDSSGRHSVSLELESEDSDWNFEVSVTMEF
Ga0184619_100130821	3300018061	Groundwater Sediment	MTAAYRGHMQVSIFVFILAVLAAGSVGAHENGASSATKETVSITDQTDQIFERAIDERIIGRLGLFDRSEDGSGRYSVSLDLENEDSDWNFEVTVTVEF
Ga0184617_11410012	3300018066	Groundwater Sediment	MTATYRGHMKVSIFVLILAVLAAGSVGAHENGASSATKETVSITDQTDQIFERAIDERTIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTITMEF
Ga0184609_100145014	3300018076	Groundwater Sediment	MTAAYRGHMKVSIFVFILAVLAAGSVRAHENGASSATKETVSITDQADRIIERAIDERTIGRLGLFDRSEDSSGRHSVSLELESEDSDWNFEVSVTMEF
Ga0066655_105355561	3300018431	Grasslands Soil	TAAYRGHMKVSIVVFILAMLAGSVVAQENGASLWPTSATAETVSVSYQANQIAKRAIDERIIDQLGLFDRSDDGGSGRYSVSLDLENEDSDWNFGVTVTMEF
Ga0173481_105910492	3300019356	Soil	IFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSLTDRADQIFERVIDERIIDRLGLFDRSDDRSARYGISLDVENEDGDWNFEVTVTMEF
Ga0137408_13085571	3300019789	Vadose Zone Soil	MTTAYRGHMQVSIFVFILAVLAAGSVGAHENGASSATKETVSITDQTDRIFERAIDERTIGRLGLFDRSDDNSSGRCSVSFDLENEDSDWNF
Ga0193756_10338091	3300019866	Soil	LAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0193720_10132482	3300019868	Soil	MTAAYRGHMKVSIFVFMLAVFVAGSVGAHENGAASPTSEAVSITHQADQIFEREIDERIISRPGLFDRSEDGSGRYSVSLDLENEDSDWNFEVTITMEF
Ga0193754_10195122	3300019872	Soil	MTAAYRGHMRVSIFVFILAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVT
Ga0193744_10037461	3300019874	Soil	DKASRQMTAAYRGHMKVNIFVFILAVLTAGSVGAHENGASSAMADAVSFTDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0193722_100070011	3300019877	Soil	MTAAYRGHMRVSIFVFILAVLTAGSVGAHENGASSAMAEAVSITDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0193723_10041145	3300019879	Soil	GIFVFTLAVVAAGSVGAHEKGASSPTSEAVSITDRADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLENEDSDWNFEVTVTMEF
Ga0193747_10101083	3300019885	Soil	MTAAYRGHMKLGIFVFTLAVVAAGSVGAHEKGASSATSEAVSITDRADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLESEDSDWNFEVTVTMEF
Ga0193735_10277122	3300020006	Soil	MIAAYRGHMKVRIFFFILAVLTAGSVGAHENGASSAMVEAVSITDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0193735_11378042	3300020006	Soil	VFTLAVVAAGSVGAHEKGASSPTSEAVSITDRADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLESEDSDWNFEVTVTMEF
Ga0193726_11537001	3300020021	Soil	RITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDGAARYGISLDLENEDGDWNFGVTVTMEF
Ga0179592_101113892	3300020199	Vadose Zone Soil	MLAAGSVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDVSSRYGISLDLENEDGDWNFEVTVTMEF
Ga0210381_100642021	3300021078	Groundwater Sediment	MTAAYRGHMKVNIFVFILAVLTAGSVGAHENGASSAMADAVSFTDQADQIFERAIDERIIGRLGLFDRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0210408_101990402	3300021178	Soil	VFAAGSVVAGEKVASPSATSVTAKDVSKTDQAGQIFERAIDERIIDRLGLFDRSDDGASRYGISLDLENEDGDWNFEVTVTMEF
Ga0222621_10644302	3300021510	Groundwater Sediment	MTAAYRGHMRVSIFVFILAVLTAGSVGAHENGASSATKETVSITDQTDQIFERAIDERTIGRLGLFDRSDDNNSGRCSVSFDLENEDSDWNFEVTVTVEF
Ga0224452_10378272	3300022534	Groundwater Sediment	MTAAYRGHMKVNIFVFILAVLTAGSVGAHENGASSATKETVSITDQADRIFERAIDERTIGRLGLFDRSEDSSGRHSVSLELESEDSDWNFEVSVTMEF
Ga0222622_100104234	3300022756	Groundwater Sediment	MTATYRGHMKVSIFVFILAVLAAGSVGAHENGALSATSEAVSITDQADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLESEDSDWNFEVTVTMEF
Ga0222622_102523412	3300022756	Groundwater Sediment	MTAAYRGHMKVNIFVFILAVLTAGLVGAHENGASSAMADAVSITDQADRIFERAIDERIIGRLGLFHRPEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0247753_10555902	3300022892	Soil	MTAAYRGHMKVSIFVFILAVLAAGSVGAHENGASSARSEAVSITDQADQIFERAIDERTIDRLGLFNRSDDNSSGRYSVSLDLENEDSDWNFEVSVTLEF
Ga0207680_109721861	3300025903	Switchgrass Rhizosphere	MAVFAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGMFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF
Ga0207684_101020824	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VSGERHPRGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERMIDRLSLFDRPDDGSARYGISLDLENEDGDWNFEVTVTTEF
Ga0207701_100264682	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLSPANERKHPDKWPRRITGHLKTSIYIFILAVFAAGSVVAHENSASPATRVAASISNQADQIFERAIDERIIDRLGLFDRSDEGSSHYEISLDLENEDSDWSFEVTVTVQF
Ga0207701_104873672	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ERHPCGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVAAKAVSMTGQADRIFERAIDERTIDRLGMFDRSDDGASRYGVSLDLENEDGDWNFEITVTMEF
Ga0207712_110347891	3300025961	Switchgrass Rhizosphere	VLSAGAVVAQENSASSSLTSATAEAVAITDQADQIFERVIDERIIDRLGLFDRSDDGSGRYDISLDLENEDGEWSFEVTVTMEF
Ga0209470_10184952	3300026324	Soil	LSLASVRAKHPRGCLQRITGHLKASIFIFILAVLAAGSVVAEEKVASPSATSVTAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVTVTMEF
Ga0179587_101183153	3300026557	Vadose Zone Soil	MLAAGSVVAEEKVASPSATSVTAKAVSMTDQADQIFERAIDERIIDRLGLFDRSDDSAARYGISLDLENEDGDWNFEVTVTMEF
Ga0268266_100554974	3300028379	Switchgrass Rhizosphere	IFIMAVFAAGSVVAEEKVASPSATSVAAKAVSITGQADRIFERAIDERTIDRLGMFDRSDDGVSRYGVSLDLENEDGDWNFEITVTMEF
Ga0307302_103921622	3300028814	Soil	AAGSVGAHENGASSATKETVSITDQTDQIFERAIDERTIGRLGLFDRSDDNNSGRCSVSFDLENEDSDWNFEVTVTVEF
Ga0307310_102641892	3300028824	Soil	FVFTLAVVAAGSVGAHEKGASSATSEAVSITDRADQIFERAIDERTIGRLGLFNRSEDNSSGQYSVSLDLESEDSDWNFEVTVTMEF
Ga0307278_105013251	3300028878	Soil	MTAAYRGHMQVSIVVFILAVLAAGSVGAHENGASSPTSEAVSITHQADQIFEREIDERIISRLGLFDRSEDGSGRYSVSLDLENEDSDWNFEVTVTMEF
Ga0307277_101308122	3300028881	Soil	MTATYRGHMKVSIFVFMLAVFVAGSVGAHENGAASPTSEAVSITHQADQIFEREIDERIISRPGLFDRSEDGSGRYSVSLDLENEDSDWNFEVTITMEF
Ga0170824_1214807442	3300031231	Forest Soil	VLSAGAIVAEEKIASRSATSVTATALSITDQADQIFERAIDERIIDRLGLFDRSDDSAARYGISLDLENEDGDWNFEVTVTMEF
Ga0310890_109069162	3300032075	Soil	MKVSIFVFIVAVLNAGSVGAHESGASSATSEGVSITDEADQIFERAVDERISRLGLFDRSEDGSGRYGVSLDLENEDSDWNFEVTITVEF
Ga0310810_100175568	3300033412	Soil	VLAAGSVVAEEKVASPSATSVTAKAVSITDQADQIFERAIDERIIDRLGLFDRSDDGSARYGISLDLENEDGDWNFEVAVTMEF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072614

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences