Metagenome / Metatranscriptome Family F072586

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072586
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	77 residues
Representative Sequence	VPKIDWFDSFDDQPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGKPVRPAAGD
Number of Associated Samples	82
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.45 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	85.95 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (19.008 % of family members)
Environment Ontology (ENVO)	Unclassified (23.140 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.587 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.00% β-sheet: 0.00% Coil/Unstructured: 81.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF12697	Abhydrolase_6	18.18
PF00676	E1_dh	15.70
PF00561	Abhydrolase_1	11.57
PF13561	adh_short_C2	5.79
PF13193	AMP-binding_C	3.31
PF09754	PAC2	2.48
PF07690	MFS_1	1.65
PF00300	His_Phos_1	1.65
PF06029	AlkA_N	0.83
PF00106	adh_short	0.83
PF00892	EamA	0.83
PF00753	Lactamase_B	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	15.70
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	15.70
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.12 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	76.86 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.13 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.31 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	59.50 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	2.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.65 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	59.50 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	59.50 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	59.50 %
Alicyclobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004800\|Ga0058861_10598462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300005167\|Ga0066672_10388748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	912	Open in IMG/M
3300005171\|Ga0066677_10015387	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300005171\|Ga0066677_10629998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300005174\|Ga0066680_10039325	All Organisms → cellular organisms → Bacteria	2727	Open in IMG/M
3300005174\|Ga0066680_10563868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	715	Open in IMG/M
3300005176\|Ga0066679_10372316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	935	Open in IMG/M
3300005177\|Ga0066690_10953658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300005178\|Ga0066688_10494404	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005180\|Ga0066685_10665042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300005184\|Ga0066671_10223707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1145	Open in IMG/M
3300005434\|Ga0070709_10530195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	898	Open in IMG/M
3300005434\|Ga0070709_10761777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	757	Open in IMG/M
3300005435\|Ga0070714_100513355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1144	Open in IMG/M
3300005435\|Ga0070714_100717881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	965	Open in IMG/M
3300005436\|Ga0070713_101018883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300005436\|Ga0070713_102113976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300005445\|Ga0070708_100179074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Alicyclobacillus	1981	Open in IMG/M
3300005454\|Ga0066687_10551164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300005467\|Ga0070706_100077741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	3071	Open in IMG/M
3300005467\|Ga0070706_100135269	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300005467\|Ga0070706_100242657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1682	Open in IMG/M
3300005467\|Ga0070706_100335881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1409	Open in IMG/M
3300005468\|Ga0070707_100742157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	945	Open in IMG/M
3300005468\|Ga0070707_101947320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300005471\|Ga0070698_100737639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	928	Open in IMG/M
3300005471\|Ga0070698_100844686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300005471\|Ga0070698_101540045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300005518\|Ga0070699_100473171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1137	Open in IMG/M
3300005529\|Ga0070741_11076559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300005533\|Ga0070734_10056565	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300005534\|Ga0070735_10570388	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005536\|Ga0070697_100098603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2425	Open in IMG/M
3300005537\|Ga0070730_10025733	All Organisms → cellular organisms → Bacteria	4500	Open in IMG/M
3300005537\|Ga0070730_10028963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	4200	Open in IMG/M
3300005542\|Ga0070732_10012908	All Organisms → cellular organisms → Bacteria	4616	Open in IMG/M
3300005542\|Ga0070732_10099865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1710	Open in IMG/M
3300005554\|Ga0066661_10301435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	987	Open in IMG/M
3300005557\|Ga0066704_10209490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1320	Open in IMG/M
3300005561\|Ga0066699_10256790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1235	Open in IMG/M
3300005569\|Ga0066705_10257639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1106	Open in IMG/M
3300005575\|Ga0066702_10160441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1338	Open in IMG/M
3300005575\|Ga0066702_10434293	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005575\|Ga0066702_10472849	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005576\|Ga0066708_10524079	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005764\|Ga0066903_100074363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4377	Open in IMG/M
3300005764\|Ga0066903_106221321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300006032\|Ga0066696_10061734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2141	Open in IMG/M
3300006032\|Ga0066696_10940676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300006175\|Ga0070712_101389859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300006796\|Ga0066665_11432214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300006800\|Ga0066660_10252827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1379	Open in IMG/M
3300006800\|Ga0066660_11551593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300006854\|Ga0075425_100225244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2157	Open in IMG/M
3300006914\|Ga0075436_100656974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300009012\|Ga0066710_101536854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1025	Open in IMG/M
3300009012\|Ga0066710_102815418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	687	Open in IMG/M
3300009089\|Ga0099828_10816083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300009089\|Ga0099828_11258903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300009090\|Ga0099827_10284351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1396	Open in IMG/M
3300009090\|Ga0099827_11121931	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009826\|Ga0123355_11211003	All Organisms → cellular organisms → Bacteria → Terrabacteria group	769	Open in IMG/M
3300010152\|Ga0126318_10666482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	802	Open in IMG/M
3300010152\|Ga0126318_10929409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300010362\|Ga0126377_12547847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300010366\|Ga0126379_12912444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300010396\|Ga0134126_10761778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1096	Open in IMG/M
3300010398\|Ga0126383_10759510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1051	Open in IMG/M
3300011269\|Ga0137392_11131064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300011270\|Ga0137391_10250065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1537	Open in IMG/M
3300011270\|Ga0137391_10577435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	945	Open in IMG/M
3300011270\|Ga0137391_10760956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	801	Open in IMG/M
3300011270\|Ga0137391_10921204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	714	Open in IMG/M
3300012096\|Ga0137389_10359107	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300012198\|Ga0137364_10813318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300012203\|Ga0137399_10767233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	812	Open in IMG/M
3300012206\|Ga0137380_10633153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	933	Open in IMG/M
3300012207\|Ga0137381_10451912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1121	Open in IMG/M
3300012210\|Ga0137378_11124655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300012211\|Ga0137377_10570778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1069	Open in IMG/M
3300012212\|Ga0150985_104439755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2182	Open in IMG/M
3300012212\|Ga0150985_109221182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	837	Open in IMG/M
3300012212\|Ga0150985_109376682	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300012212\|Ga0150985_120909505	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300012356\|Ga0137371_11218784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300012359\|Ga0137385_10970080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300012363\|Ga0137390_11289082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300012532\|Ga0137373_10548913	Not Available	877	Open in IMG/M
3300012922\|Ga0137394_11122644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	650	Open in IMG/M
3300012955\|Ga0164298_11405079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300013765\|Ga0120172_1052231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1054	Open in IMG/M
3300015373\|Ga0132257_103018046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300018433\|Ga0066667_10197444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1474	Open in IMG/M
3300018433\|Ga0066667_12331461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300018482\|Ga0066669_10871935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	803	Open in IMG/M
3300018482\|Ga0066669_11624523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300020069\|Ga0197907_10184924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1135	Open in IMG/M
3300020080\|Ga0206350_11432012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300020080\|Ga0206350_11455115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1401	Open in IMG/M
3300021362\|Ga0213882_10025798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2253	Open in IMG/M
3300021374\|Ga0213881_10565439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300021384\|Ga0213876_10005255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7134	Open in IMG/M
3300021384\|Ga0213876_10792613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300021388\|Ga0213875_10104838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1320	Open in IMG/M
3300021388\|Ga0213875_10218858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	897	Open in IMG/M
3300021388\|Ga0213875_10551810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300021388\|Ga0213875_10603902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300021953\|Ga0213880_10051970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1000	Open in IMG/M
3300022467\|Ga0224712_10100147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1227	Open in IMG/M
3300025906\|Ga0207699_10813234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	687	Open in IMG/M
3300025910\|Ga0207684_10022736	All Organisms → cellular organisms → Bacteria	5353	Open in IMG/M
3300025910\|Ga0207684_10164827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1909	Open in IMG/M
3300025910\|Ga0207684_10282846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1430	Open in IMG/M
3300025922\|Ga0207646_10498731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1097	Open in IMG/M
3300025922\|Ga0207646_10718837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	892	Open in IMG/M
3300027842\|Ga0209580_10189157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1019	Open in IMG/M
3300027857\|Ga0209166_10022476	All Organisms → cellular organisms → Bacteria	3917	Open in IMG/M
3300027857\|Ga0209166_10074297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1931	Open in IMG/M
3300027875\|Ga0209283_10780356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300027882\|Ga0209590_10995748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300030743\|Ga0265461_14022314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.60%
Host-Associated	Host-Associated	12.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.95%
Plants	Host-Associated → Plants	10.74%
Aquatic	Environmental → Aquatic	1.65%
Human	Host-Associated → Human	0.83%
Arthropoda	Host-Associated → Arthropoda	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.47%
Roots	Host-Associated → Plants → Roots	4.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.13%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Digestive System	Host-Associated → Human → Digestive System	0.83%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.50%
Loam	Environmental → Terrestrial → Soil → Loam	23.97%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.83%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.66%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.83%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.83%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058861_105984622	3300004800	Host-Associated	VGDRLGAVPKIDWFDNFDDQARWEPRIRGDRFRRDPRDRRTRLEQIIAMAALPPMVQQPPVRRPLHLIWGAPVRQTPEA*
Ga0066672_103887482	3300005167	Soil	VPKIDWFEPYDDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPERRPAGDAEGGNP*
Ga0066677_100153871	3300005171	Soil	VPKIDWFDSFDDQPRWEPRVRRDRLRRDARDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGQPVRGAARDAESGSG*
Ga0066677_106299981	3300005171	Soil	VPKIDWFGSFDDQPRWEPRARRDRFHRDPRDRRTRLEQIIAMASLPPLVQDTPVRRPLHLIWGPAVRQSGPESDAP*
Ga0066680_100393252	3300005174	Soil	VPKIDWFDSFDDQPRWEPRIRRDRLRRDARDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGQPVRGAARDAESGSG*
Ga0066680_105638681	3300005174	Soil	DWFDDRDDQPRWEPRPRRERTGRDTRDRRVRLEQIIALASASPALPDHPVRRPLHLIWGEPLSRPTGDDGP*
Ga0066679_103723162	3300005176	Soil	VPKIDWFDDRDDQPRWEPRPRRERTGRDTRDRRVRLEQIIALASASQALPDHPVRRPLHLIWGEPLSRPTGDDGP*
Ga0066690_109536581	3300005177	Soil	VPKIDWFDSFDNQPRWEPRARRDRFHRDPRDRRTRLEQIIAMASLPPLVQDTPVRRPLHLIWGPPVRQSGPDTDAH*
Ga0066688_104944042	3300005178	Soil	VPKIDWFDSFDDQPRWEPRTRRDRFHRDPRDRRTRLEQIIAMASLPPLVQDTPVRRPLHLIWGPPVRQSGPESDAH*
Ga0066685_106650422	3300005180	Soil	MPKIDWFDNTDDQPRWEPRARRERLPRDVRERRARLDQIIAMASSPPLVPDVATRRPLHLIWGLPMRSTANSDAADNAKD*
Ga0066671_102237072	3300005184	Soil	VPKIDWFDSFEDQPRWEPRIRRDRFRRDPRDRRTRLEQIIVMTSLPPMVQEPQVRRPLHLIWGPPKRQASGETDNGSA*
Ga0070709_105301951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDNFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPVTQDPPVRRPLHLIWGAPVRRAADDGASQAESS*
Ga0070709_107617772	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDSFEDQPRWEPRIRRDRFHRDPRDRRTRLEQIIAMAALPPLTQDQPARRPLHLIWGTAERAPRSSPPNGSN*
Ga0070714_1005133552	3300005435	Agricultural Soil	VPKIDWFDNFDDQPRWEPRVRRDRFRRDPRDRRTRLEQIIAMASLPPVTQDPPARRPLHLIWGTPARPSSATGEDGNASSK*
Ga0070714_1007178813	3300005435	Agricultural Soil	GVPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPLTQDQPARRPLHLIWGTPERPSRNAPPNGSN*
Ga0070713_1010188832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPLTQDQPARRPLHLIWGTPERPSRNAPPNGSN*
Ga0070713_1021139761	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DWFDNFEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPLTQEPAARRPLHLIWGAPVQRGGGQDGKSGPNLP*
Ga0070708_1001790742	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASDAGS*
Ga0066687_105511642	3300005454	Soil	VPKIDWFEPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGSPARPPTGDAEGGKG*
Ga0070706_1000777414	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASDTGS*
Ga0070706_1001352692	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTARDPRERRVRLEQIIALAAVSASSTPDLATRRPLHLIWGEPLPGPARDGGS*
Ga0070706_1002426571	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDSFDDQPRWEPRARRDRFHRDPRDRRSRLEQIIAMASLPPVSQEPQLKRPLHLIWGPPVRHPSAEHDADSR*
Ga0070706_1003358811	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWLDSEDDQPRWEPRARRERLPRDVRERRARLDQIIALAASPPLIPDLATRRPLHLIWGTPIRRPAVDAEPGSPQE*
Ga0070707_1007421571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDNDDQPRWEPRPRRERTIRDPRERRVRLEQIIALKAVSRSDLELPVRRPLHLIWGEPLRGPRSDAG*
Ga0070707_1019473201	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFESFEDQPRWEPRARRERFHRDPRDRRTRLEQIIAMASLPPVTQEPPVRRPLHLIWGP
Ga0070698_1007376392	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDNDDQPRWEPRPRRERTIRDPRERRVRLEQIIALKAVSRSDLELPVRRPLHLIWGEPTRGPAREPRS*
Ga0070698_1008446862	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASDAGS*
Ga0070698_1015400451	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	WFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATSPALPDHPVRRPLHLIWGEPLRGPASDAGS*
Ga0070699_1004731712	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDNDDQPRWEPRPRRERTTRDPRERRIRLEQIIALAAVSRSDLELPVRRPLHLIWGEPLRGPRSDAG*
Ga0070741_110765591	3300005529	Surface Soil	WFESADDQPRWEPRLRRDRFRRDPRDRRMRLEQIIAMASLPPAAQEPPVRRPLHLIWGSPVRPAAEDAGGSSPV*
Ga0070734_100565653	3300005533	Surface Soil	VPKIDWFDNFDDQPRWEPRVRRDRFRRDPRDRRTRLEQIIAMASLPPVTQDPPARRPLHLIWGAPVRPTATSGDDASAT*
Ga0070735_105703882	3300005534	Surface Soil	MRVPKIDWFDSFDDQPRWEPRPRRDRFHRDPRDRRTRLEQIIAMASLPPVVQEPPVRRPLHLIWGPPVRRTAEDTDTGLR*
Ga0070697_1000986034	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASD
Ga0070730_100257335	3300005537	Surface Soil	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPLAQDQPARRPLHLIWGTPERPSHNSPPKGTN*
Ga0070730_100289635	3300005537	Surface Soil	VPKIDWSDERDDQPRWESRPRRDRTARDPRDRRVRLEQIIALAASAPSLPDLPVRQPLHLIWGKPLPRSAGDADCRQS*
Ga0070732_100129083	3300005542	Surface Soil	VPKIDWFDNFEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPMTTQEPAARRPLHLIWGAPAQRNQQDGTRGPG*
Ga0070732_100998652	3300005542	Surface Soil	LSQVPKIDWFDSFDDQPRWEPRVRRDRFRRDPRDRRTRLEQIITMASLPPVTQEPAVRRPLHLIWGAPVRPSTEDSAAS*
Ga0066661_103014351	3300005554	Soil	VPKIDWFDDRDDQPRWEPRPRRERTGRDTRDRRVRLEQIIALASASPALPDHPVRRPLHLIWGEPLSRPTGDDGP*
Ga0066704_102094902	3300005557	Soil	VPKIDWFEPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPVRRPTGDAEGGNG*
Ga0066699_102567902	3300005561	Soil	VPKIDWFEPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQYAPVKRPLHLIWGSPARPPTGDAEGGKG*
Ga0066705_102576391	3300005569	Soil	GTSLRVPKIDWFEPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPVRRPTGDAEGGNG*
Ga0066702_101604413	3300005575	Soil	VPKIDWFDSFDDQPRWEPRARRDRFHRDPRDRRTRLEQIIAMASLPPLVQDTPVRRPLHLIWGPPVRQSGPDTDAH*
Ga0066702_104342932	3300005575	Soil	VPKIDWFDAFEDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPMVQEPHVRRPLHLIWGPPTRQATSETDNGSA*
Ga0066702_104728492	3300005575	Soil	VPKIDWFEPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGSPARPATGDAEGGKG*
Ga0066708_105240792	3300005576	Soil	VPKIDWFDPYEDESRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGSPARPPTGDAEGGKG*
Ga0066903_1000743633	3300005764	Tropical Forest Soil	VPKIDWFDPYEDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPVRRPAGDAEGGTR*
Ga0066903_1062213212	3300005764	Tropical Forest Soil	VPKIDWLDDGDDLPRWQPRPRRERWPRDLRDRRARLDQIIALAATPPLAPEPPTRRPLHLIWGVPVRPRPDEPSTGAGT*
Ga0066696_100617343	3300006032	Soil	VPKIDWFDPYEDESRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPVRRPTGDAEGGNG*
Ga0066696_109406762	3300006032	Soil	VPRIDWFDNLEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPVVQEPPVRRPLHLIWGAPVRQSGNDSPRAAS*
Ga0070712_1013898592	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDTSDNQPHWEPRPRRERASRELRDRRTRLEQIIAMAATPPALPEPPIKRPLHLIWGAPVWHTA
Ga0066665_114322142	3300006796	Soil	VPKIDWFDSFDDQPRWEPRVRRDRLRRDARDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGQPVRGAARDAESGAVKTTQSPSTTSQPAW*
Ga0066660_102528272	3300006800	Soil	VTKIDWFDSFEDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPMVQEPQVRRPLHLIWGRPTRQATGETDNDSA*
Ga0066660_115515931	3300006800	Soil	TEKVVPKIDWFDSFDDQPRWEPRARRDRFHRDPRDRRTRLEQIIAMASLPPLVQDTPVRRPLHLIWGPPVRQSGPDSDAH*
Ga0075425_1002252444	3300006854	Populus Rhizosphere	VPKIDWFDSFDDQPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGKPVRPAAGDAESGSS*
Ga0075436_1006569741	3300006914	Populus Rhizosphere	VPKIDWFDSFDDQPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGKPVRPAAGD
Ga0066710_1015368541	3300009012	Grasslands Soil	MPKIDWFDNTDDQPRWEPRARRERLPRDVRERRARLDQIIAMASSPPLVPDVATRRPLHLIWGRPMRSTANSDAADNAKD
Ga0066710_1028154182	3300009012	Grasslands Soil	VPKIDWFDDRDDQPRWEPRPRRERTARDTRDRRGRLEQIIAPAAPPACAPAVSTTRPLYPISGEPPARPTEH
Ga0099828_108160833	3300009089	Vadose Zone Soil	VPKIDWFDNSDDQPRWEPRPRRERTARDPRDRRLRLEQIIAMAASSPALPDHPVRRPLHMIWGEPQRGPARETSA*
Ga0099828_112589032	3300009089	Vadose Zone Soil	VPKIDWFDDSDDQPRWEPRPRRERTGRDPRDGRGRLEQIIALAAVSPGVPEVSTRRPLHLIWGEPRRGSARDAGL*
Ga0099827_102843512	3300009090	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRDRLPRDVRERRARLDQIIAMSSSPLVPDEATRRPLHLIWGVPVRHLADSDAADSAND*
Ga0099827_111219312	3300009090	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRDRLPRDVRQRRARLDQIIAMASSPPLVPDVATRRPLHLIWGAPMRHPADSTANADTKD*
Ga0123355_112110031	3300009826	Termite Gut	PRWEPRLRRDRFRRDPRDRRTRLEQIIAMASLPPVTQEPPVRRPLHLIWGAPVRQSADDAANGLPEGQ*
Ga0126318_106664821	3300010152	Soil	KIDWFDNLDDQPRWEPRIRRDRFRRDARDRRTRIEQIIAMAALPPLVQEPAVRRPLHLIWGAPERQSNQDTTS*
Ga0126318_109294092	3300010152	Soil	DQPRWEPRIRRDRFRRDARDRRTRLEQIIAMAALPPLVQEPAVRRPLHLIWGVPERQSDKDTTS*
Ga0126377_125478471	3300010362	Tropical Forest Soil	VPKIDWFDNFDDQARWEPRIRRDRFRRDPRDRRTRLEQIIAMASLPPATQPEPPARRPLHLIWGAPVRDRADDAAQ*
Ga0126379_129124442	3300010366	Tropical Forest Soil	VPKIDWFDNFDDQARWEPRIRRDRFRRDPRDRRTRLEQIIAMASLPPATQPEPPARRPLHLIWG
Ga0134126_107617783	3300010396	Terrestrial Soil	VPKIDWFDNFEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPLTQEPAARRPLHLIWGAPVQRGGGQDGKSGPNLP*
Ga0126383_107595102	3300010398	Tropical Forest Soil	VPKIDWFDNFDDQARWEPRIRRDRFRRDPRDRRTRLEQIIAMASLPPATQPEPPARRPLHLIWGAPVRDRADDTAQ*
Ga0137392_111310641	3300011269	Vadose Zone Soil	MLRAVNCQGVPKIDWFDNTDDQPHWEPRARRDRLPRDVRERRARLDQIIAMASSPPLVPDLATKRPLHLIWGVPIRRSADSDADDSAKA*
Ga0137391_102500653	3300011270	Vadose Zone Soil	VPKIDWFEPYDDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPIKRPLHLIWGPPERRPAGDAKGGNP*
Ga0137391_105774351	3300011270	Vadose Zone Soil	SRIDWKRVPKVDWFDSFEDQPRWEPRVRRDRFHRDPRDRRSRLEQIIAMASLPPVTQEPQLRRPLHLIWGPPMRQPGAETDADSR*
Ga0137391_107609562	3300011270	Vadose Zone Soil	VPKIDWFDDSDDQPRWEPRPRRERTARDPRERRVRLEQIIALAAVSRGFPDVPTRRPLHLIWGEPLRGPASEAGY*
Ga0137391_109212041	3300011270	Vadose Zone Soil	VPKIDWFDDSDDQPRWEPRPRRERTARDPRERRVRLEQIIALAAVATSSAPDLATRRPLHLIW
Ga0137389_103591072	3300012096	Vadose Zone Soil	VPKIDWFDDSDDQPRWEPRPRRERTARDPRERRVRLEQIIALAAVATSSAPDLATRRPLHLIWGEPPRGPASNGGS*
Ga0137364_108133182	3300012198	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRSRRDRLPRDVRERRARLDQIIAMASSPPLVPDVATRRPLHLIWGVPVRHLADSDAADSAKD*
Ga0137399_107672332	3300012203	Vadose Zone Soil	VPKIDWFYDRDDQPRWEPRPRRERTGRDPRERRVRLEQIIALASASPAIPDHPVRRPLHLIWGEPIARPAGDAGT*
Ga0137380_106331531	3300012206	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRERLPRDVRERRARLDQIIAMASSPPLVPDVATRRPLHLIWGLPMRSTANSDAADNAKD*
Ga0137381_104519122	3300012207	Vadose Zone Soil	VPKIDWFDDRDDQPRWEPRLRRERTGRDTRDRRVRLEQIIALASASPALPDHLVRRPLHLIWGEPLARPTGDDGP*
Ga0137378_111246552	3300012210	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRDRLPRDVRERRARLDQIIAMASSPLVPDVATRRPLHLIWGVPVRHLADSDAADSAKD*
Ga0137377_105707782	3300012211	Vadose Zone Soil	VPKIDWFDSFDDQPRWEPRARRDRFHRDPRDRRTRLEQIIAMASLPPVMQDPPVRRPLHLIWGPPVRGAAGDAERGAS*
Ga0150985_1044397552	3300012212	Avena Fatua Rhizosphere	VPKIDWFDTFDDQPRWEPRIRRDRFRRDPHDRRTRLEQIIAMAGLPPVAQEPPVRRPLHLIWGVPVRQPPDAPANS*
Ga0150985_1092211823	3300012212	Avena Fatua Rhizosphere	IDWFDDNDVQPRLQPRSRRERWPRDLRERRARLDQIIALAAQPPLSPEPPVKRPLHLIWGAAAPRTPEEDI*
Ga0150985_1093766822	3300012212	Avena Fatua Rhizosphere	VPKIDWFDNFDDQPHWEPRIRRDRVRRDPHDRRSRLEQLIAMTQPPSVTQEPSARRPLHLIWGAPVRQPAPDAPDASG*
Ga0150985_1209095052	3300012212	Avena Fatua Rhizosphere	VPKIDWFDNVDDQPRWEPRIRRDRFRRDPHDRRSRLEQLIAMTQLPPVTQEPPERRPLHLIWGAPVRQPAGGAPDASA*
Ga0137371_112187841	3300012356	Vadose Zone Soil	VPKIDWFDSFEDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPMVQEPHVRRPLHLIWGPPMRQTAAETDNDSG*
Ga0137385_109700802	3300012359	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRDRLPRDVRERRARLDQIIAMASSPLVPDVATRRPLHLIWGVPVRHLADSDAADSAKG*
Ga0137390_112890822	3300012363	Vadose Zone Soil	VPKIDWFEPYDDEPRWEPRIRRDRLRRDPRDRRTRLEQIIAMASLPPVVQDAPVKRPLHLIWGPPERRPAGDA
Ga0137373_105489132	3300012532	Vadose Zone Soil	VPKIDWFDNSDDQPRWEPRPRRDRFPRDVRDRRARLEQIIALASSPPLVADVQTRRPLHLIWGMPARRSTLDQNSTDSQA*
Ga0137394_111226442	3300012922	Vadose Zone Soil	VPKIDWFDDSDDQPRWEPRPRRERAMRDPRDRRVRLEQIIALAATSPALSDHPVRRPLHLIWGEPLRGSSGDAGP*
Ga0164298_114050792	3300012955	Soil	VPKIDWFDNSDDQPRWEPRIRRDRFRRDPHDRRSRLEQLIAMTQLPPVTQEPPARRPLHLIWGTPVRPSSTTGDDASSK*
Ga0120172_10522312	3300013765	Permafrost	VAKEGGKLGQVPKIDWVDDNNNENQPRWEPRPRRERAARETRDRRARLEQIIAMAAVPPVLPEPPLRRPLHLIWGPPTKT*
Ga0132257_1030180461	3300015373	Arabidopsis Rhizosphere	VPKIDWFDNFDDQPRWEPRIRRDRFRRDPHDRRTRLEQLIAMTQLPPVTQDPPARRPLHLIWG
Ga0066667_101974443	3300018433	Grasslands Soil	VPKIDWFDSFDDQPRWEPRVRRDRLRRDARDRRTRLEQIIAMASLPPLVQEPPVKRPLHLIWGQPVRGAARDAESGSG
Ga0066667_123314612	3300018433	Grasslands Soil	LTWVPKIDWFDDRDDQPRWEPRPRRERTGRDTRDRRVRLEQIIALAALSPGVPDVSTRRPLHLIWGEPLACPTGDDGP
Ga0066669_108719352	3300018482	Grasslands Soil	VPKIDWFDDRDDQPRWEPRPRRERTGRDTRDRRVRLEQIIALAALSPGVPDVSTRRPLHL
Ga0066669_116245232	3300018482	Grasslands Soil	VPKIDWFDSFEDQPRWEPRIRRDRFRRDPRERRTRLEQIIAMTSLPPIVQEPQVRRPLHLIWGPPTRQASDAADDGSA
Ga0197907_101849242	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFQDNDNQPRWEPRPRRERAAREARDRRARLEQIIAMASGPPPLPEPPIKRPLHLIWGAPVARRESDQPADET
Ga0206350_114320121	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDSFDDQPHWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPLTQEPPARRPLHLIWGTPGRQPSDGPASETT
Ga0206350_114551151	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDNFEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPLTQEPAARRPLHLIWGAPVQRGGGQDGKSGPNLP
Ga0213882_100257983	3300021362	Exposed Rock	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPVSQEPPVRRPLHLIWGTPARSATDQPGSA
Ga0213881_105654392	3300021374	Exposed Rock	VPKIDWFDNFDDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMASLPPVTQEPAVRRPLHLIWGAPVRERHEDM
Ga0213876_100052555	3300021384	Plant Roots	VPKIDWFDNFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPVTQDPPVRRPLHLIWGTPVRRSAEDAPADGA
Ga0213876_107926132	3300021384	Plant Roots	VPKIDWFDNFDDQPRWEPRVRRDRFRRDPRDRRTRLEQIIAMASLPPVTQDAPARRPLHLIWGAPVRPAATSGDDASGT
Ga0213875_101048382	3300021388	Plant Roots	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRARLEQILAMTSLPPVTQDAPVRRPLHLIWGAPVRPSAGETPADG
Ga0213875_102188582	3300021388	Plant Roots	VPKIDWFDNYDDQPHWEPRPRRDRSRDRRARLEQIIAMSALPPVVQEPAARRPLHLIWGAPTRRAPGEAGNTT
Ga0213875_105518101	3300021388	Plant Roots	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPVSQEPPVRRPLHLIWGTPARSATD
Ga0213875_106039022	3300021388	Plant Roots	VPKIDWFDNFDDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPVTQEPPARRPLHLIWGVPTQRAGQDPKSPNNS
Ga0213880_100519703	3300021953	Exposed Rock	NFEDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPMTQQEPPARRPLHLIWGVPVERRGPDNPTGAA
Ga0224712_101001472	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDNFEDQPRWEPRLRRDRFRRDPRDRRTRLEQIIAMAALPPLTQEPAARRPLHLIWGAPVQRGGGQDGKSG
Ga0207699_108132342	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDNFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMTSLPPVTQDPPVRRPLHLIWGTPVQRA
Ga0207684_100227362	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTARDPRERRVRLEQIIALAAVSASSTPDLATRRPLHLIWGEPLPGPARDGGS
Ga0207684_101648272	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDSFDDQPRWEPRARRDRFHRDPRDRRSRLEQIIAMASLPPVSQEPQLKRPLHLIWGPPVRHPSAEHDADSR
Ga0207684_102828462	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASDTGS
Ga0207646_104987312	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDNDDQPRWEPRPRRERTIRDPRERRVRLEQIIALAAVSRSDLELPVRRPLHLIWGEPLPGPARDGGS
Ga0207646_107188372	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPKIDWFDDSDDQPRWEPRPRRERTTRDPRDRRVRLEQIIALAATAPALPDHPVRRPLHLIWGEPLRGPASDAGS
Ga0209580_101891572	3300027842	Surface Soil	VPKIDWFDSFDDQPRWEPRVRRDRFRRDPRDRRTRLEQIITMASLPPVTQEPAVRRPLHLIWGAPVRPSTEDSAAS
Ga0209166_100224763	3300027857	Surface Soil	VPKIDWSDERDDQPRWESRPRRDRTARDPRDRRVRLEQIIALAASAPSLPDLPVRQPLHLIWGKPLPRSAGDADCRQS
Ga0209166_100742973	3300027857	Surface Soil	VPKIDWFDSFDDQPRWEPRIRRDRFRRDPRDRRTRLEQIIAMAALPPLAQDQPARRPLHLIWGTPERPSHNSPPKGTN
Ga0209283_107803562	3300027875	Vadose Zone Soil	VPKIDWFDNSDDQPRWEPRPRRERTARDPRDRRLRLEQIIAMAASSPALPDHPVRRPLHKIWGEPQRGPARETSA
Ga0209590_109957481	3300027882	Vadose Zone Soil	VPKIDWFDNTDDQPRWEPRARRDRLPRDVRQRRARLDQIIAMASSPPLVPDVATRRPLHLIWGAPMRHPADSTANADTKD
Ga0265461_140223141	3300030743	Soil	MAAVPKIDWFSDNGDDQPHWEPRPRRERVSRDPRDRRARLEQIIASAALPPAASEPPLKRPLHLIWGVPLRRPTADAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072586

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences