Metagenome Family F072585

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072585
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	124 residues
Representative Sequence	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWA
Number of Associated Samples	109
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.30 %
% of genes near scaffold ends (potentially truncated)	82.64 %
% of genes from short scaffolds (< 2000 bps)	85.12 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.289 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.703 % of family members)
Environment Ontology (ENVO)	Unclassified (43.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.98% β-sheet: 0.00% Coil/Unstructured: 51.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00239	Resolvase	5.79
PF02720	DUF222	2.48
PF13592	HTH_33	1.65
PF01740	STAS	1.65
PF13551	HTH_29	1.65
PF13411	MerR_1	0.83
PF13669	Glyoxalase_4	0.83
PF07508	Recombinase	0.83
PF13281	MAP3K_TRAF_bd	0.83
PF12697	Abhydrolase_6	0.83
PF13683	rve_3	0.83
PF03706	LPG_synthase_TM	0.83
PF00005	ABC_tran	0.83
PF12146	Hydrolase_4	0.83
PF02371	Transposase_20	0.83
PF06445	GyrI-like	0.83
PF08157	NUC129	0.83
PF03050	DDE_Tnp_IS66	0.83
PF12902	Ferritin-like	0.83
PF12802	MarR_2	0.83
PF13426	PAS_9	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	6.61
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	5.79
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.83
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
All Organisms	root	All Organisms	34.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
cellular organisms	root	All Organisms → cellular organisms	34.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.66 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.61 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.48 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	1.65 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.65 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.83 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	6.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	1.65 %
Aequoribacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter	1.65 %
Catenulisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae	0.83 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.83 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.83 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Planobispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora	6.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	1.65 %
Aequoribacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter → Aequoribacter fuscus	1.65 %
Catenulispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora	0.83 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.83 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.83 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Planobispora rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	6.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	1.65 %
Aequoribacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter → Aequoribacter fuscus	1.65 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.83 %
Streptomyces davaonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces davaonensis	0.83 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.83 %
Phycicoccus elongatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	0.83 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.29 %
Planobispora rosea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	6.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.48 %
Gordonia sputi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	1.65 %
Aequoribacter fuscus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter → Aequoribacter fuscus	1.65 %
Nocardioides sp. Kera G14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	0.83 %
Streptomyces davaonensis JCM 4913	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces davaonensis → Streptomyces davaonensis JCM 4913	0.83 %
Catenulispora acidiphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	0.83 %
Phycicoccus elongatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	0.83 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_108116018	Not Available	559	Open in IMG/M
3300003218\|JGI26339J46600_10149198	Not Available	544	Open in IMG/M
3300004092\|Ga0062389_104244197	Not Available	539	Open in IMG/M
3300005162\|Ga0066814_10091158	Not Available	560	Open in IMG/M
3300005165\|Ga0066869_10017463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1050	Open in IMG/M
3300005177\|Ga0066690_10234670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1228	Open in IMG/M
3300005337\|Ga0070682_100737977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter → Aequoribacter fuscus	793	Open in IMG/M
3300005341\|Ga0070691_10498436	Not Available	703	Open in IMG/M
3300005343\|Ga0070687_100208731	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300005345\|Ga0070692_10779316	Not Available	651	Open in IMG/M
3300005347\|Ga0070668_100900522	Not Available	791	Open in IMG/M
3300005356\|Ga0070674_101369554	Not Available	633	Open in IMG/M
3300005364\|Ga0070673_102122587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → Phycicoccus elongatus	534	Open in IMG/M
3300005435\|Ga0070714_101024722	Not Available	803	Open in IMG/M
3300005436\|Ga0070713_100109447	All Organisms → cellular organisms → Bacteria	2407	Open in IMG/M
3300005439\|Ga0070711_101818559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	535	Open in IMG/M
3300005445\|Ga0070708_101579611	Not Available	611	Open in IMG/M
3300005458\|Ga0070681_10439348	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300005468\|Ga0070707_100709581	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005539\|Ga0068853_101144489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Aequoribacter → Aequoribacter fuscus	751	Open in IMG/M
3300005546\|Ga0070696_101166232	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005548\|Ga0070665_100628798	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005563\|Ga0068855_100629267	Not Available	1155	Open in IMG/M
3300005615\|Ga0070702_100616649	Not Available	816	Open in IMG/M
3300005844\|Ga0068862_101270192	Not Available	737	Open in IMG/M
3300006028\|Ga0070717_11362752	Not Available	644	Open in IMG/M
3300006175\|Ga0070712_101420463	Not Available	606	Open in IMG/M
3300006237\|Ga0097621_102419616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia sputi	503	Open in IMG/M
3300006797\|Ga0066659_10448126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	1025	Open in IMG/M
3300006804\|Ga0079221_10718477	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300006806\|Ga0079220_10197938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1157	Open in IMG/M
3300006806\|Ga0079220_12050844	Not Available	511	Open in IMG/M
3300006871\|Ga0075434_102598504	Not Available	507	Open in IMG/M
3300006903\|Ga0075426_10194104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Kera G14	1471	Open in IMG/M
3300009036\|Ga0105244_10427130	Not Available	609	Open in IMG/M
3300009522\|Ga0116218_1077875	Not Available	1511	Open in IMG/M
3300009523\|Ga0116221_1064209	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300009553\|Ga0105249_10484226	Not Available	1280	Open in IMG/M
3300009553\|Ga0105249_11301276	Not Available	798	Open in IMG/M
3300009698\|Ga0116216_10599831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	663	Open in IMG/M
3300009698\|Ga0116216_10613186	Not Available	655	Open in IMG/M
3300009792\|Ga0126374_10670545	Not Available	776	Open in IMG/M
3300010343\|Ga0074044_10731228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	646	Open in IMG/M
3300010373\|Ga0134128_10355725	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300010375\|Ga0105239_10551311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1313	Open in IMG/M
3300010375\|Ga0105239_12958342	Not Available	554	Open in IMG/M
3300010379\|Ga0136449_103418524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300010396\|Ga0134126_10864233	Not Available	1019	Open in IMG/M
3300010403\|Ga0134123_13132971	Not Available	531	Open in IMG/M
3300012207\|Ga0137381_11174196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300012208\|Ga0137376_11017353	Not Available	709	Open in IMG/M
3300012285\|Ga0137370_10637871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	660	Open in IMG/M
3300012359\|Ga0137385_10041319	All Organisms → cellular organisms → Bacteria	4133	Open in IMG/M
3300012499\|Ga0157350_1021590	Not Available	650	Open in IMG/M
3300012986\|Ga0164304_10255323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1178	Open in IMG/M
3300013105\|Ga0157369_10547441	Not Available	1196	Open in IMG/M
3300013296\|Ga0157374_10429934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1320	Open in IMG/M
3300013306\|Ga0163162_11131102	Not Available	888	Open in IMG/M
3300013307\|Ga0157372_10484340	Not Available	1442	Open in IMG/M
3300014325\|Ga0163163_12716392	Not Available	552	Open in IMG/M
3300014745\|Ga0157377_10264014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1121	Open in IMG/M
3300014968\|Ga0157379_10292128	Not Available	1484	Open in IMG/M
3300015373\|Ga0132257_102085560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300017973\|Ga0187780_10937143	Not Available	630	Open in IMG/M
3300018058\|Ga0187766_11153007	Not Available	559	Open in IMG/M
3300020022\|Ga0193733_1189796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	534	Open in IMG/M
3300021088\|Ga0210404_10763938	Not Available	552	Open in IMG/M
3300021403\|Ga0210397_10637240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300021479\|Ga0210410_10417026	Not Available	1202	Open in IMG/M
3300021479\|Ga0210410_11337897	Not Available	609	Open in IMG/M
3300024245\|Ga0247677_1071197	Not Available	515	Open in IMG/M
3300024331\|Ga0247668_1099122	Not Available	590	Open in IMG/M
3300025899\|Ga0207642_11105244	Not Available	513	Open in IMG/M
3300025905\|Ga0207685_10440036	Not Available	676	Open in IMG/M
3300025906\|Ga0207699_10474229	Not Available	900	Open in IMG/M
3300025911\|Ga0207654_10159018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Catenulisporaceae → Catenulispora → Catenulispora acidiphila	1458	Open in IMG/M
3300025911\|Ga0207654_11203559	Not Available	552	Open in IMG/M
3300025913\|Ga0207695_11415136	Not Available	576	Open in IMG/M
3300025914\|Ga0207671_10625416	Not Available	858	Open in IMG/M
3300025915\|Ga0207693_10204395	Not Available	1553	Open in IMG/M
3300025915\|Ga0207693_11113474	Not Available	599	Open in IMG/M
3300025915\|Ga0207693_11156910	Not Available	585	Open in IMG/M
3300025918\|Ga0207662_10848861	Not Available	645	Open in IMG/M
3300025919\|Ga0207657_10383647	Not Available	1106	Open in IMG/M
3300025920\|Ga0207649_11232535	Not Available	591	Open in IMG/M
3300025927\|Ga0207687_10061078	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300025928\|Ga0207700_10491516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1085	Open in IMG/M
3300025928\|Ga0207700_10606653	Not Available	974	Open in IMG/M
3300025928\|Ga0207700_10866549	Not Available	808	Open in IMG/M
3300025931\|Ga0207644_10971763	Not Available	712	Open in IMG/M
3300025942\|Ga0207689_10018270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5918	Open in IMG/M
3300025949\|Ga0207667_10997131	Not Available	825	Open in IMG/M
3300025949\|Ga0207667_11499870	Not Available	645	Open in IMG/M
3300026088\|Ga0207641_11208765	Not Available	755	Open in IMG/M
3300026095\|Ga0207676_10789063	Not Available	926	Open in IMG/M
3300026118\|Ga0207675_102591193	Not Available	517	Open in IMG/M
3300026142\|Ga0207698_10829780	Not Available	928	Open in IMG/M
3300027625\|Ga0208044_1000876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18812	Open in IMG/M
3300027662\|Ga0208565_1208986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planobispora → Planobispora rosea	553	Open in IMG/M
3300027725\|Ga0209178_1411713	Not Available	515	Open in IMG/M
3300028072\|Ga0247675_1008437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1425	Open in IMG/M
3300028787\|Ga0307323_10122861	Not Available	934	Open in IMG/M
3300030494\|Ga0310037_10248888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces davaonensis → Streptomyces davaonensis JCM 4913	772	Open in IMG/M
3300031226\|Ga0307497_10298369	Not Available	738	Open in IMG/M
3300031679\|Ga0318561_10466575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300031723\|Ga0318493_10832595	Not Available	521	Open in IMG/M
3300031740\|Ga0307468_102316027	Not Available	522	Open in IMG/M
3300032160\|Ga0311301_10640778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	33.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.29%
Plants	Host-Associated → Plants	33.06%
Aquatic	Environmental → Aquatic	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.74%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Roots	Host-Associated → Plants → Roots	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.50%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.05%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_08436360	2170459005	Grass Soil	TAQVQARWAARRAFASETGSEGGAWLDGDAAEAIACDAAMAPVVTGDVNVDALEDLVRLCVELNRLRRDGGEEPASGPGGSGTDTTAAWAALEQAVIGKNHKFPTALLFIA
JGI10216J12902_1081160181	3300000956	Soil	MRRLMAAGLLPERAGQPVKAWVHISLADLMLLDADSALQDQWTAHVRRQWAARRAFASETGSEGGAWLDGDAAETVACDAAMAPIVTGDINIDALEDLVRLCVELDARQRDGARDAAWAAVEQAVIGKAVDLLSGPGGL
JGI26339J46600_101491981	3300003218	Bog Forest Soil	MQRLVTAGLLPERAGQPVKAWAHISLADLMVLDGSSALLEEWTSRVRAQWAAHRAEASAGGSDGGAWLDGDAAEAIACDAAMAPIVTGEVNPAALDDLVRLCVELDRLRHHPRTGTDG
Ga0062389_1042441971	3300004092	Bog Forest Soil	MRRLVAAGLLPERAGQPVKAWVHISLADLMMLDGSSALLEEWTARVRAQWAGHRAQASAGGSYGGAWLDGDAATAMACDAAMAPFVTGEVNPAALEDLVRLCVELD
Ga0066814_100911581	3300005162	Soil	MQKHSHRMRRLVAAGLLPERAGQPVKAWVHISLADLLLLDADSALQEQWAAQIRERWAARRAFASETGSEGGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDRLRPGGEARPDTTAAWAALERAVIGKAVDLLSG
Ga0066869_100174632	3300005165	Soil	MRRLAASDLLPERAGQPVKAWVHVSLADLMRLDGSSALLEQWTAQVRARWAARRAGASQGGGDGGAWLDGDAAGAVTCDAAMAPVVAGEVNADALEDLVRLCVELERHRRGAAGGMTDAGITD
Ga0066690_102346702	3300005177	Soil	MRRLVASDLLPERAGQPVKAWVHISLADLLLLDADSALQQQWTAQLRERWAAHRAFASQTGSEGGAWLDGDAAEGVACDAAMAPIVTGDVNVDALEDLVRLCVELDGRRDGARDAAWAALEEAVIGK
Ga0070682_1007379771	3300005337	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLD
Ga0070691_104984361	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTR
Ga0070687_1002087311	3300005343	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGT
Ga0070692_107793161	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAAAIACDAAMSPVVTGDINIDALDDLVRLCVELDRLRRDH
Ga0070668_1009005221	3300005347	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAVVCDAAMEPVVTGDVNVDALGDLVRLCVE
Ga0070674_1013695541	3300005356	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCV
Ga0070673_1021225871	3300005364	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQMEWTERVRARWAARRAHAGETGANDGAWLDGNAAAAVACDAAMAPVVTGDINVDALEDLVRLCVELDQLRRDGNPRPGTTAAWAAIEQAVIGKAVDLVSGPGGLA
Ga0070714_1010247221	3300005435	Agricultural Soil	ERAGQPVKTWAHISLADLLLLDADSALQEQWTERVRARWAARRAHAAETGANDGAWLDGDAAAAIACDAAMAPLVTGDVNVDALEDLVRLCVELDARRRDGGRDAAWAAIEQAVIGKTVVLLLRS*
Ga0070713_1001094472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHFISQRMRRLVAARLLPERAGQPVKVWAHISLADLMLLDGDSALQQQWTAQVRERWAAHRARASETGSDGGVWLDGDAAEGIACDAAMAPIVTGDVNVDALEDLVRLCVELDGRRRDGGRDATWAALEQAVIGKTMFVLLHSTSPS*
Ga0070711_1018185591	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFPNWRMRRLTASGLLPERAGQPVKAWAHISLADLMLLDAGSALQDQWTAQVRERWAARRAAASETGASDGVWLDGDAAAAIACDAAMSPVVTGDINVDALDDLVRLCVELDARRRDGTRDAAWAALEQAVIGKAVDLVSGPGG
Ga0070708_1015796111	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VWAHISLADLLRLYGSSALQEEWTAQVRAWWAGHRAAASEAGGDSGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDAQRDGARDAAWAALEQAVIGKTIFLLLHSQ*
Ga0070681_104393481	3300005458	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAVD
Ga0070707_1007095812	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSLADLLLLDADSALQEQWTAQVRAQWAAHRAAASETGSNDGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDARRDGARDAAWAALEQVVIGKAVDLLSGPGGTSS*
Ga0068853_1011444891	3300005539	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLR
Ga0070696_1011662322	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIACDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWA
Ga0070665_1006287981	3300005548	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRRDGDGPDTPAAGT
Ga0068855_1006292674	3300005563	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAALEQAVIGKAVDLLSGPGGLA
Ga0070702_1006166492	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRL
Ga0068862_1012701922	3300005844	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINIDALEGLVRLCVELDARRRD
Ga0066790_100280162	3300005995	Soil	MRRLVSAGLLPERAGQPARVWAHISLADLMVLDADSALQKQWTERVRGEWAGHRAAASVAGSDGAAWLDGDAAEGFACDASITPVVFGEVNPAVLDDLVRLCVQLAGHGHGRCTPSRRRP
Ga0070717_113627521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VWAHISLADLLRLDGSSALQEQWTAQVRAAWAARRGHAAGTGANDGVWLDGDAAEGIACDAAMAPVVTGDVNVDALGDLVRLCVELDARQRDGARDAAWAALEQAVIGKAVDLLSG
Ga0066652_1010921462	3300006046	Soil	MTQNHSDRMRRLLAAGLLPERAGQPVKALVHISLADLMLLNGSSALMDEWIAGVRAQWAAARAAASESGSDGGAWLDGDGARSFTCDASVTPVVTGEVNPTALEDLIRLCAELDKRRRAE
Ga0070712_1014204632	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVAARLLPERAGQPVKVWAHISLADLMLLDGDSALQRQWTAQVRARWAARRAAASETGSDGGVWLDGDAAEAIACDAAMAPIVTGDVNIDALEGLVRLCVELDRLRRDGDRPG
Ga0097621_1024196161	3300006237	Miscanthus Rhizosphere	MQVTMHFPNWRMRRLTASGLLPERAGQPVKAWAHISLADLMLLDAGSALQDQWTAQVRERWAARRAAASETGASDGVWLDGDAAAAIACDAAMSPVVTGDINVDALEDLVRLCVELDARRRDGTR
Ga0066659_104481261	3300006797	Soil	MRRLTAANLVPERAGQPVKAWVHITLADLLLLDADSALQEQWTEQVRARWAARRAQASETGANDGAWLEGDAAAAITCDAAMAPVVTGDVNVDALED
Ga0079221_107184772	3300006804	Agricultural Soil	VTNITMQNPNYRMRRLTASGLLPERAGQPVKAWVHVSLADLLLLDGDSALQQEWTERVRARWAARRAQASETGASDGAWLDGDATDAITCDATMAPVVTGDVDVDALEDLVRLCVELDARRRDGTRDAAWAAIEQQVIGK
Ga0079220_101979381	3300006806	Agricultural Soil	VGAHLAADLILLDAHSTLQDEWTAQVREQWAARRAAASEAGASDGVWLDGDAAEAIACDAVMAPVVTGDINVDALEDLIRLCVELDRLRRDGDGPDTPAADTTAAWAAVEQAVIGKAVDLLSGPGG
Ga0079220_120508441	3300006806	Agricultural Soil	MQITMHFYNQRMRRLVAAGLLPERAGQPVKVWAHVSLADLLLLDGDSALQQQWTAHVRARWAARRAAASQTGSDGGVWLDGDAAEGIACDAAMAPVVTGDVNVDALEDLVRLCVELDGRRDSTRDAAWAAIEQAVIGKAV
Ga0075434_1025985041	3300006871	Populus Rhizosphere	MRRLLAAGLLPERAGQPVKGLVHVSLADLMLLDGSSALMDEWIAGVRAQWAAARAAASQSGSDGGAWLDGNGARSFTCDASVTPVVTGEVNLAA
Ga0075426_101941043	3300006903	Populus Rhizosphere	MQVTMHFPNWRMRRLAAAGLLPERAGQPVKAWAHISLADLILLDGDSALQDEWTERVRARWAARRAHAAETGASDGAWLDGDAADAVACDAAMAPVVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAALEQAVIGKAVDL
Ga0105244_104271301	3300009036	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPVKAWAHISLADLLLDGDSALQQEWTERVRARWAARRAHAAETGASDGAWLDGDAAAAVACDATMAPIVTGDINVDALDDLVRLCVELDARRRDGTRDAAWAAIEQA
Ga0116218_10778752	3300009522	Peatlands Soil	MRRLVAANLLPERAGQPVKAWMHISPADLMVLEGSSALLAEWTSRVRAQWAAHRAQASAGGSDGGAWLDGDAAETMACDAAMAPFVTGEVNPAALDDLVRLCVDLDRLRHHPRTGSDRAGQDDTD
Ga0116221_10642093	3300009523	Peatlands Soil	MRRLVAAGLLPERAGQPVKAWVHISLADLMVLDGSSALLEEWTSQVRAQWAGHRARASAGGGDGGAWLDGDAAAAMACDAAMAPFVTGEVNPAALDDLVRLCVELDRLGHHPRTGGSG
Ga0105249_104842261	3300009553	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAVDLLSGPGGLASFLRRREL
Ga0105249_113012762	3300009553	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGKAVD
Ga0116216_105998311	3300009698	Peatlands Soil	MTQNHSGRMRRLVAAGLLPERAGQPVKAWVHLSLADLMVLDGSSALLEEWTAGIRARWAGHRAEASAGAGDGGAWLDGDAAQAVACDAAMAPFVTGEVNPAALEDL
Ga0116216_106131861	3300009698	Peatlands Soil	MRRLVAAGLLPERAGQPVKAWVHISLADLMILDGSSALLEEWTSQVRAQWAGHRAAASAGGSDGGAWLDGDAAEAVACDAAMAPFVTGEVNPAALEDLVRLCVQLDRLRHHPPTGPDGTSSDGTNA
Ga0126374_106705451	3300009792	Tropical Forest Soil	MRRLASSDLLPERAGQPVKVWAHISLADLLRLDDNSALQEEWTSQVRATWAAHRAKASETGGDGGAWLDGDAAAGVACDAAMAPIVTGDVDPGALEELVRLCVELDRHRRAAGADAAGADADPGAG
Ga0074044_107312281	3300010343	Bog Forest Soil	MTQNHSGRMQRLIAADLLPERAGQPVKAWVHMSLADLLLLDGSSALLQEWTDGLRAQWAAHRAGASVGGSDGGAWLDGDAAAAMACDAAMAPFVTGEVNPAA
Ga0134128_103557252	3300010373	Terrestrial Soil	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRRPGDGGDGGPAEPAADTTAAWAAVEQA
Ga0105239_105513111	3300010375	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAVVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTTAAWAVAE
Ga0105239_129583421	3300010375	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAALEQAVIGKAVDLLSGPG
Ga0136449_1034185241	3300010379	Peatlands Soil	PERAGQPVKAWVHISLADLMVLEGSSALLEEWTARVRAQWAGHRAAASAGGSDGGAWLDGDAAEAIACDAAMAPFVTGEVNPAALEDLVRLCVLCRYRHNAGSTTRLSSTGGAGRSS*
Ga0134126_108642331	3300010396	Terrestrial Soil	MRRLAASGLLPERAGQPVKAWAHISLADLIRLDAGSALQDEWTAQVRERWAARRAQASESGAADGVWLDGDAAEAIACDATMAPIVTGDVNVDALEGLVRLCVELDRLRRDGDGPDTPAAGTTAAWAAVEQAVIGKAVDLL
Ga0134123_131329712	3300010403	Terrestrial Soil	MRRLAASGLLPERAGQPVKAWAHISLADLMLLDAGSALQDQWTAQVRERWAARRAAASETGASDGVWLDGDAAASIACDAAMSPVVTGDINVDALDDLVRLCVELDARRRDGTRDAAWAAVEQAVIGKAVDLLSGRGGW
Ga0137374_112985341	3300012204	Vadose Zone Soil	MTQKHSERMRRLLAAGLLPERAGQPVKALVHVSLADLMLIDGSSALMDEWIAGVRAQWAAARAAASQGGSDGGVWLDGDGARSFTCDASVTPVVTGEVNPAALEDLIRLCAELDKRRRAKDSSRAVGSPAPDGPAPD
Ga0137381_111741961	3300012207	Vadose Zone Soil	VRVTIDVIKLTMQKPDCRMRRLTAANLVPERAGQPVKAWAHIALADLLLLDGDSALQQEWTEQVRARWAARRAQASETGANDGAWLDGDAAAAIACDAAMAPVVTGDVDVDALEDLVRLCVELDARRRDGTRDAAWAALEQAVI
Ga0137376_110173532	3300012208	Vadose Zone Soil	MKRLVAAGLLPERAGQPVKAWVHMSLADLLRLDGDSALQEQWTARVREQWAARQAFASETGSDSGAWLDGDAAEGIACDAAMAPVVTGDVDIDALEHLV
Ga0137379_117850001	3300012209	Vadose Zone Soil	MRRLLAAGLLPERAGQPVKALVHVSLADLMLLDGSSALMDEWIAGVRTQWAAARAAASHSGSDGGAWLDGDAARSFTCDASVTPVVTGQVNPGALEDLIRLCAELDKRRHTEDHAGETGDPAPDTPAEEA
Ga0137370_106378711	3300012285	Vadose Zone Soil	MTQKHSLRMRRLVAARLLPERAGQPVKVWAHVLLADLMPLDGDSALQEQWTAQVRERWAARRAAASQTGSDGGVWLDGDAAEAIACDAAMAPIVTGDVNIDALEDLV
Ga0137386_104838491	3300012351	Vadose Zone Soil	MQVTMHFPNWRMRRLLAAGLLPERAGQPVKALVHVSLADLMLIDGSSALMDEWIAGVRAQWAAARAAASQGGSDGGVWLHGDGARSFTCDASVTPVVTGEVNPAALEDLIRLCAELDKRR
Ga0137385_100413191	3300012359	Vadose Zone Soil	MRRLMAAGLLPERAGQPVKAWVHISLADLLLLDAGSALQDQWTAQVRARWAAHRAKASETGASDGAWLDGDAAKAIACDAAMAPVVTGDVNVDALEDLVRLCVELDG
Ga0157350_10215902	3300012499	Unplanted Soil	VKVWAHISLADLLRLDGSSALQEQWTAQVRARWAGHRAAASEGGGDAGAWLDGDAAPAIAYDAAMAPIVTGDVNVDALDDLVRLCVELDARRRDGTRDAA*
Ga0137407_104123282	3300012930	Vadose Zone Soil	MTQNHSDRMRRLLAAGLLPERAGQPVKALVHISLADLMLLNGSSALMDEWIAGVRAQWAAARAAASESGSDGGAWLDGDGARSFTCDASVTPVVTGEVNPAALDDLIYVKPGSFYFGNGGLPSSRI*
Ga0164304_102553232	3300012986	Soil	MCRLAAVGMLPERAGQPVKAWAHISLADLLRLDGDSALQEQWTERVRARWAARRAHASETGASDGAWLDGDAAGAIACDAAMAPVVTGDVNVDALETSDAI*
Ga0157369_105474412	3300013105	Corn Rhizosphere	MRRLVAANLLPERAGQPVKVWAHICLADLLRLDGSSALQEEWTAQVRARWAAHRAAASETGANDGAWLDGDAAEGIACDAAMAPIVTGDVNVDALGDLVRLCVELDAR
Ga0157374_104299343	3300013296	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAVVCDAAMEPVVTGDVNVDAL
Ga0163162_111311021	3300013306	Switchgrass Rhizosphere	LLPERAGQPVKAGVHISLADLMLLDGDSALQDQWTAHVRRQWAAQRAFAAETGSEGGAWLDGDAAEAVACDAAMAPIVTGDVNIDALEDLVGLCVELDARR
Ga0157372_104843401	3300013307	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAVDLVSGPDGLASFLRRRE
Ga0163163_127163921	3300014325	Switchgrass Rhizosphere	CDYSSKAVTEITMHFHNQCMRRLAAAGLLPERAGQPVKAWAHISLADLMLLDGGSALQDEWTAQVRERWAARRAQASESGAADGVWLDGDAAEAIACDAAMAPVVTGDINVDALEGLVRLCVELDRLRRDGDGPDTPAADTTAARAAVEQAVIGKAVDLLSGPGGLASFLRRRELGVRLGGPSL
Ga0157377_102640142	3300014745	Miscanthus Rhizosphere	MRRLAAAGLLPERAGQPVKAWVHISLADLLLLDADSALQEQWTAQIRERWAACRAFASEAGSEGGAWLDGDAAEGIACDAAMAPIVTGDINVDALEDLVRLCVELDELRRDGAPRPGTTAARAA
Ga0157379_102921281	3300014968	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVI
Ga0132257_1020855603	3300015373	Arabidopsis Rhizosphere	VRVTIDVIKLTMQKPNWRMRRLVAANLLPERAGQPVKIWAHMSLADLLRLDGSSALQEEWTAQVRAAWAAHRAEAAESGSDGGTWLDGDAAEGIACDAAMAPVVT
Ga0187780_109371432	3300017973	Tropical Peatland	ARPELGFRPVCLGVVHDSNMTQKHSGRMRRLLAADLVPERAWQPVKAWVHISLADRMRLEGSSALLGEWTVQVAPSGPRRAEAAVGNYGEAWLDGEDADAIACDAAMAPIVTGEVNPGAPEDLVRLCVQLDGSSPCGW
Ga0187766_111530071	3300018058	Tropical Peatland	MQRLLAAGLLPERAGQPVKALLHISLADLMRLDGSSAMQEEWTAQVRAAWAAHRAAASVSGSDGGAWLDGEDVGAIACDAAMTPVVTGEVNPAALEDLVRLCVQFDKLRHGAD
Ga0193733_11897962	3300020022	Soil	MTQKHSGRMRRLIAAGLLPERAGQPVKAWAHISLADLLLLDADSALQEEWTERVRARWAARRAHAAETGANDGAWLDGDAAEAIVCDAAMAPVVTGDVNVDALA
Ga0210404_107639381	3300021088	Soil	MRRLTAAGLLPERAGQPVKAWVHISLADLMLLDGDSALQEQWTERVRARWADRRAAASETGASDGAWLDGDAAQAVACDAAMAPIVTGDVNVDALEDLVRLCVELDRLRRADDGDGPAEPAS
Ga0210397_106372403	3300021403	Soil	MRRLVAAGVLPERTGQPVKIWAHSSLADLLRLQGSSALQEEWTAQVRARWAGHCAAASEGGGDAGAWLDGDAAEAIACDAAMAPIVTGDLDPGVLEDLVR
Ga0210410_104170261	3300021479	Soil	GQPVKAWVHLSLADLLLLDGDSALQEQWTAQVRERWAARRAFAAETGSEGGAWLDGDAAGAIACDAATAPVVTGDVNVAALEDLVRLCVELDRLRHADDTGCADDGGRADTPAPDTTAAWAALEQAVIGKTIIFLLRSLCPC
Ga0210410_113378971	3300021479	Soil	DGDSALQEQWTAQVRERWAAHRAVASEGGGDAGAWLDGDAAEAIACDAVMAPIVTGDVNVGALEDLVRLCVELDRLRRDGQARSDTTQVRSDTTQAWAALEQAVIGKTINFLLRSRYSC
Ga0247677_10711971	3300024245	Soil	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALGDLVRLCVELDARQRDGARDAAWAALEQAVIGKAVDLLSGPGGL
Ga0247668_10991221	3300024331	Soil	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAVVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRL
Ga0207642_111052441	3300025899	Miscanthus Rhizosphere	MRRLAASGLLPERAGQPVKAWAHISLADLMLLDGGSALQDEWTAQVRERWAARRAQASESGAADGVWLDGDAAEAIACDAAMAPVVTGDINVDALEGLVRLCVELDRLRRDGDGPDTPAADTTAARAAVEQAVIGKAVDLLSGPGGLASFLRRRELGVR
Ga0207685_104400361	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFPNWRMRRLTASGLLPERAGQPVKAWAHISLADLMLLDPGSALQDQWTAQVRERWAARRAAASETGASDGVWLDGDAAAAIACDAAMSPVVTGDINVDALDDLVRLCVELDARRRDGTRDAAWAALEQAVIGKALDLVSGPGGWRRSC
Ga0207699_104742291	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VWAHISLADLLRLDGSSALQEEWTAQVRARWAARRAAASETGADDGAWLDGDAAEGIACDAAMAPIVTGDVDVDALGDLVRLCVELDARRDGARDAAWAALEQAVIGKAVDLLS
Ga0207654_101590181	3300025911	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRD
Ga0207654_112035591	3300025911	Corn Rhizosphere	VKIWAHISLADLLRLDSSSALQEEWTAQVRARWAGHRAAASEGGGDTGAWLDGDAAEAIACDAAMAPIVTGDVNVDALDDLVRLCVELDRHRRADTRDTTAAWEALE
Ga0207695_114151361	3300025913	Corn Rhizosphere	VKAWVHITLADLLRMDGDSALQEQWTEQVRARWAARRAHAAETGASDGAWLDGDAAAAIVCDAAMAPVVTGDVNVDALDDLVRLCVELDRLRRGDEP
Ga0207671_106254161	3300025914	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAMDLLS
Ga0207693_102043953	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLAAAGLLPERAGQPVRARAHICLAGLILLDAHSALQEWTGRVRARWAGRRAHAAGAGASDGAWLDGDAAMAPVVTGDVNVDALEDLVRLCVELDRRRRDGTRDAAWAAIEQAVIGTAVDL
Ga0207693_102660334	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQVTMHFHNWRMRRLLAAGLLPERAGQPVKALVHVSLADLMLLDGSSALMDEWIAGVRAQWAAARAAASESGSDGGAWLDGDGARSFTCDASVTPVVTGEVNPAALDDLI
Ga0207693_111134741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAVDLVSG
Ga0207693_111569102	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKVTMHFHNQRMRRLAASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINIDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGKAVDLVSGPGGWRRSCG
Ga0207662_108488611	3300025918	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAAAGQAV
Ga0207657_103836472	3300025919	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGKAVDLVSGPG
Ga0207649_112325351	3300025920	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWA
Ga0207687_100610781	3300025927	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVELDRLRR
Ga0207700_104915161	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MHFISQRMRRLVAARLLPERAGQPVKVWAHISLADLMLLDGDSALQQQWTAQVRERWAAHRARASETGSDGGVWLDGDAAEGIACDAAMAPIVTGDVNVDALEDLVRLCVELDGRRRDGGRDATWAALEQAVIGKTMFVLLHSTSPS
Ga0207700_106066532	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGK
Ga0207700_108665491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDT
Ga0207644_109717631	3300025931	Switchgrass Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAW
Ga0207669_107929931	3300025937	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAAVEQAVIGKAVDLLSGPVGLASFLRRRQLGVRLAGPSLPLDIGYAETVPAGIRNAVLLR
Ga0207689_100182707	3300025942	Miscanthus Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAAAGQAVIGKAMDLLSG
Ga0207667_109971311	3300025949	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWAVAGQAVIGKAVDLLSGPGGLAGFLRRRELGVRLGG
Ga0207667_114998701	3300025949	Corn Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAA
Ga0207641_112087652	3300026088	Switchgrass Rhizosphere	MRRLTASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGKAVDLVSGPGGL
Ga0207676_107890631	3300026095	Switchgrass Rhizosphere	MKVTMHFHNQRMRRLAASGLLPERAGQPVKAWAHISLADLLLLDADSALQDQWTERVRARWAARRAHAAETGASDGAWLDGDAAEAVACDAAMAPIVTGDINVDALEGLVRLCVELDARRRDGTRDAAWAAIEQAVIGKAVDLVS
Ga0207675_1025911931	3300026118	Switchgrass Rhizosphere	PNMVGGEKFTMPTVRVPHRVMQVTMHFPNWRMSRLVAADLLPERAGQPVKVWAHICLADLLRLDGSSALQEEWTAQVRARWAAHRAAASATGASGGVWLDGDAAEGIACDEAMAPIVTGDVDVNALGDLVRLCVELDARQRDGARDAAWAALEQAVIGKAVDLLSGPGGLA
Ga0207698_108297801	3300026142	Corn Rhizosphere	MRRLTAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAVVCDAAMEPVVTGDVNVDALEDLVRLCVELDRL
Ga0209179_11588362	3300027512	Vadose Zone Soil	SALQEQWTAQVRARWAGHRAAASEGGGDTGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDGRRDGAQDAAWAALEQAVIGKAVTHYTDLLN
Ga0208044_10008761	3300027625	Peatlands Soil	MRRLVAAGLLPERAGQPVKAWVHISLADLMVLEGSSALLEEWTARVRAQWAGHRAAASAGGSDGGAWLDGDAAEAIACDAAMAPFVTGEVNPAALEDLVRLCVLCRYRHNAGSTTRLSSTGGAGRSS
Ga0208565_12089862	3300027662	Peatlands Soil	MMQKHSGRMRRLVAAGLLPERAGQPVKAWVHISLADLMVLDGSSALLEEWTSQVRAQWAGHRARASAGGGDGGAWLDGDAAEAVACDAAMAPFVTGEINPGALEDLVRLCVELDRLGHHPGP
Ga0209178_14117131	3300027725	Agricultural Soil	MQNPNYRMRRLTASGLLPERAGQPVKAWVHVSLADLLLLDGDSALQQEWTERVRARWAARRAQASETGASDGAWLDGDATDAITCDAAMAPVVTGDVDVDALEDLVRLCVELDARRRDGTRDAAWAAIEQQVIGKAVDLLSGLGGLVSFLRRR
Ga0247675_10084373	3300028072	Soil	MRRLAAAGLLPERAGQPAWAHISLADLLLLDADSALQDEWTERVRARWAARRAHAAETGANEGAWLDGDAAAAIVCDAAMEPVVTGDVNVDALEDLVRLCVDLDRLRRDGDGPDTPAAGTAAAWA
Ga0307323_101228612	3300028787	Soil	VKVWAHISLADLLRLDGSSALQDEWTAQVRARWAGHRAAASEGGGDAGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDGRRDGARDAAWAALEQAVIGKAVDLLSG
Ga0310037_102488881	3300030494	Peatlands Soil	MRRLVAAGLLPERAGQPVKAWVHICLADLMMLDGSSALLEEWTALVRAQWAGHRAAASAGGNDGGAWLDGDAAEAVACDAAMAPFVTGEVNPAALDDLGAPRGALLVSPA
Ga0307497_102983692	3300031226	Soil	MKRLVASGLLPERAGNPVKAWAHISLADLLLLDGDSALQEEWTAQVRARWAATRAFAAETGSEGGAWLDGQDAEAIACDAAMAPIVTGDINIDALEDLVRLCVELDARRRDGTRDAA
Ga0318561_104665751	3300031679	Soil	VHISLADLVRLDGSSVLQEEWTAQVRAAWNAHRARASETGANDGAWLDGDAAEAIACDAAMAPIVTGDVNIDALADLVRLCVELDGRRDGTRDAAWAALE
Ga0318493_108325951	3300031723	Soil	MRRLAASDLLPQRAGQPVKAWMHMSLAELLAMDGSSVLQEEWTAQVRAQWAAHRAGASVDGGEQGTWLEGDAARAVACDAAMAPYVTGNVNPAALEDLIRLC
Ga0307468_1023160271	3300031740	Hardwood Forest Soil	MSRLTAAGLLPERAGQPVKVWAHISLANLLRLDGSSALQEEWTAQVRARWAGHRAAASEGGGDSGAWLDGDAAEAIACDAAMAPIVTGDVNVDALEDLVRLCVELDARRRDGARDAAWAALEQAVIGKAVDL
Ga0308176_107266262	3300031996	Soil	MRRLLAADLLPERAGQPVKALVHMSLADLMLLDGSSALMEEWAAQVRAQWAAARAAASEGGSDGGAWLDGETAVAFTCDASTIPVVTGDVNLGALEDL
Ga0311301_106407782	3300032160	Peatlands Soil	VRRLVAADLLPERASQPAKVWAHISLADLMMLDGSSALQEEWTARVRAQWAGHRAQASAGGSDGGAWLDGDAATAMAFDAATAPIVTGEVNPAALDDLVRLCVELDRLRHR
Ga0335082_104669461	3300032782	Soil	MRRLLAAGLLPERAGQPVKALVHMSLADVMRLNGSSALMEEWSAQVRAQWAAARGAASQGGGDGGAWLDGAAAAGFTCDASAIPVVTGDVNLGALQDLIRLCTELGQLHPDTAAGTGQ
Ga0335079_108231792	3300032783	Soil	MRRLLPAGLLPERAGQPVKALVHVSLADLMLINGSSALMEEWSAQVRAQWAAARAAASVRGSDGGAWLDGENAAAVTCDASTIPVVTGDVNLAALEDLIRLCTELGQLHRDNAGTGQDDGASE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072585

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences