Metagenome / Metatranscriptome Family F072578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	132 residues
Representative Sequence	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS
Number of Associated Samples	103
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.17 %
% of genes near scaffold ends (potentially truncated)	65.29 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.025 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.223 % of family members)
Environment Ontology (ENVO)	Unclassified (31.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.587 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.81% β-sheet: 41.51% Coil/Unstructured: 49.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.107.1.3: PA0094-like	d1tu1a1	1tu1	0.67266
d.107.1.1: Ran-binding protein mog1p	d1jhsa_	1jhs	0.66494
d.107.1.2: PsbP-like	d1v2ba_	1v2b	0.6269
e.3.1.1: beta-Lactamase/D-ala carboxypeptidase	d4f7ya_	4f7y	0.61504
e.3.1.0: automated matches	d6o9sa_	6o9s	0.59702

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00850	Hist_deacetyl	31.40
PF13458	Peripla_BP_6	4.96
PF03466	LysR_substrate	2.48
PF02653	BPD_transp_2	1.65
PF12399	BCA_ABC_TP_C	0.83
PF00126	HTH_1	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	62.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
All Organisms	root	All Organisms	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
cellular organisms	root	All Organisms → cellular organisms	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.84 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.36 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	4.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.36 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.75 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.65 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	15.70 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.26 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.65 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.65 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Corynebacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis	15.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.65 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.65 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Fodinicola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola	15.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.65 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.65 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Fodinicola acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	15.70 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.26 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.65 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.65 %
Sphingomonas sp. MEA3-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. MEA3-1	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig42739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300000878\|AL9A1W_1069523	Not Available	647	Open in IMG/M
3300001330\|A305W6_1043393	Not Available	672	Open in IMG/M
3300001526\|A105W1_1256394	Not Available	565	Open in IMG/M
3300001527\|A3513AW1_1145439	Not Available	519	Open in IMG/M
3300002568\|C688J35102_120985130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6047	Open in IMG/M
3300003324\|soilH2_10285063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1151	Open in IMG/M
3300004479\|Ga0062595_102236062	Not Available	537	Open in IMG/M
3300005163\|Ga0066823_10118137	Not Available	560	Open in IMG/M
3300005164\|Ga0066815_10012993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1061	Open in IMG/M
3300005186\|Ga0066676_10534787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	795	Open in IMG/M
3300005336\|Ga0070680_100032748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4184	Open in IMG/M
3300005337\|Ga0070682_101990459	Not Available	511	Open in IMG/M
3300005338\|Ga0068868_100104189	All Organisms → cellular organisms → Bacteria	2299	Open in IMG/M
3300005338\|Ga0068868_100274735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1424	Open in IMG/M
3300005341\|Ga0070691_10309102	Not Available	866	Open in IMG/M
3300005354\|Ga0070675_101315374	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	666	Open in IMG/M
3300005435\|Ga0070714_100137610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2189	Open in IMG/M
3300005435\|Ga0070714_100601733	Not Available	1056	Open in IMG/M
3300005435\|Ga0070714_101768130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300005437\|Ga0070710_11498530	Not Available	507	Open in IMG/M
3300005439\|Ga0070711_101944030	Not Available	517	Open in IMG/M
3300005451\|Ga0066681_10530223	Not Available	727	Open in IMG/M
3300005458\|Ga0070681_10055138	All Organisms → cellular organisms → Bacteria	3959	Open in IMG/M
3300005545\|Ga0070695_100899441	Not Available	715	Open in IMG/M
3300005547\|Ga0070693_101354825	Not Available	552	Open in IMG/M
3300005560\|Ga0066670_10402282	Not Available	839	Open in IMG/M
3300005614\|Ga0068856_102449659	Not Available	529	Open in IMG/M
3300005616\|Ga0068852_100380902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1384	Open in IMG/M
3300005718\|Ga0068866_10281701	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1030	Open in IMG/M
3300005764\|Ga0066903_108900086	Not Available	509	Open in IMG/M
3300005842\|Ga0068858_101375999	Not Available	695	Open in IMG/M
3300005887\|Ga0075292_1064794	Not Available	544	Open in IMG/M
3300005896\|Ga0075282_1073252	Not Available	519	Open in IMG/M
3300006031\|Ga0066651_10259495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	922	Open in IMG/M
3300006175\|Ga0070712_101768751	Not Available	541	Open in IMG/M
3300006175\|Ga0070712_102045443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. MEA3-1	502	Open in IMG/M
3300006755\|Ga0079222_10175063	Not Available	1256	Open in IMG/M
3300006804\|Ga0079221_10376838	Not Available	869	Open in IMG/M
3300006852\|Ga0075433_11317511	Not Available	625	Open in IMG/M
3300006871\|Ga0075434_101100814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	808	Open in IMG/M
3300006871\|Ga0075434_102347549	Not Available	536	Open in IMG/M
3300006904\|Ga0075424_101074690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300006904\|Ga0075424_101429381	Not Available	734	Open in IMG/M
3300006953\|Ga0074063_13524430	Not Available	564	Open in IMG/M
3300009090\|Ga0099827_11764575	Not Available	539	Open in IMG/M
3300009093\|Ga0105240_10223121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2194	Open in IMG/M
3300009093\|Ga0105240_10563596	Not Available	1259	Open in IMG/M
3300009101\|Ga0105247_11044347	Not Available	641	Open in IMG/M
3300009148\|Ga0105243_11844262	Not Available	636	Open in IMG/M
3300009545\|Ga0105237_12735871	Not Available	504	Open in IMG/M
3300010371\|Ga0134125_10897860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300010371\|Ga0134125_11445259	Not Available	749	Open in IMG/M
3300010373\|Ga0134128_10155060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	2588	Open in IMG/M
3300010375\|Ga0105239_10358759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1646	Open in IMG/M
3300010375\|Ga0105239_11208320	Not Available	871	Open in IMG/M
3300010399\|Ga0134127_10289467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1572	Open in IMG/M
3300011106\|Ga0151489_1231577	Not Available	582	Open in IMG/M
3300011107\|Ga0151490_1453391	Not Available	815	Open in IMG/M
3300011119\|Ga0105246_11218905	Not Available	693	Open in IMG/M
3300011998\|Ga0120114_1015126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1680	Open in IMG/M
3300012003\|Ga0120163_1069325	Not Available	812	Open in IMG/M
3300012004\|Ga0120134_1022390	Not Available	1015	Open in IMG/M
3300012349\|Ga0137387_10747662	Not Available	707	Open in IMG/M
3300012356\|Ga0137371_10409490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300012491\|Ga0157329_1019202	Not Available	626	Open in IMG/M
3300012955\|Ga0164298_10208459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1148	Open in IMG/M
3300012957\|Ga0164303_10094288	Not Available	1465	Open in IMG/M
3300012960\|Ga0164301_10698705	Not Available	763	Open in IMG/M
3300012984\|Ga0164309_10371326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1057	Open in IMG/M
3300012984\|Ga0164309_10688103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	810	Open in IMG/M
3300012984\|Ga0164309_11976319	Not Available	500	Open in IMG/M
3300012985\|Ga0164308_10383592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1144	Open in IMG/M
3300012987\|Ga0164307_10316168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300012989\|Ga0164305_10143148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1611	Open in IMG/M
3300012989\|Ga0164305_11266699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	642	Open in IMG/M
3300013296\|Ga0157374_10099565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2785	Open in IMG/M
3300013307\|Ga0157372_10202649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2299	Open in IMG/M
3300013307\|Ga0157372_10492155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1430	Open in IMG/M
3300013308\|Ga0157375_11268225	Not Available	866	Open in IMG/M
3300013503\|Ga0120127_10192069	Not Available	504	Open in IMG/M
3300013758\|Ga0120147_1036394	Not Available	893	Open in IMG/M
3300013766\|Ga0120181_1010373	Not Available	2672	Open in IMG/M
3300013768\|Ga0120155_1127943	Not Available	697	Open in IMG/M
3300013772\|Ga0120158_10197533	Not Available	1055	Open in IMG/M
3300014056\|Ga0120125_1031643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1135	Open in IMG/M
3300014497\|Ga0182008_10073138	Not Available	1687	Open in IMG/M
3300014745\|Ga0157377_11027289	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	626	Open in IMG/M
3300015160\|Ga0167642_1008352	Not Available	1847	Open in IMG/M
3300015371\|Ga0132258_12032412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1445	Open in IMG/M
3300015371\|Ga0132258_12045664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1440	Open in IMG/M
3300015373\|Ga0132257_100270373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2035	Open in IMG/M
3300019890\|Ga0193728_1285376	Not Available	637	Open in IMG/M
3300020070\|Ga0206356_11243578	Not Available	643	Open in IMG/M
3300020070\|Ga0206356_11500828	Not Available	815	Open in IMG/M
3300021078\|Ga0210381_10076726	Not Available	1051	Open in IMG/M
3300025544\|Ga0208078_1047430	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	917	Open in IMG/M
3300025604\|Ga0207930_1086094	Not Available	731	Open in IMG/M
3300025898\|Ga0207692_10072325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1821	Open in IMG/M
3300025898\|Ga0207692_10940302	Not Available	569	Open in IMG/M
3300025899\|Ga0207642_10153295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1229	Open in IMG/M
3300025905\|Ga0207685_10660247	Not Available	566	Open in IMG/M
3300025912\|Ga0207707_10005340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11230	Open in IMG/M
3300025915\|Ga0207693_10281858	Not Available	1302	Open in IMG/M
3300025916\|Ga0207663_10097316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1968	Open in IMG/M
3300025921\|Ga0207652_10634271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	956	Open in IMG/M
3300025981\|Ga0207640_10458433	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1052	Open in IMG/M
3300026035\|Ga0207703_11575906	Not Available	632	Open in IMG/M
3300026078\|Ga0207702_10245461	Not Available	1679	Open in IMG/M
3300026078\|Ga0207702_12191955	Not Available	541	Open in IMG/M
3300027725\|Ga0209178_1051835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1318	Open in IMG/M
3300028778\|Ga0307288_10057415	Not Available	1352	Open in IMG/M
3300028793\|Ga0307299_10030806	Not Available	1949	Open in IMG/M
3300028884\|Ga0307308_10250717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	848	Open in IMG/M
3300030336\|Ga0247826_10504910	Not Available	914	Open in IMG/M
3300031184\|Ga0307499_10097877	Not Available	799	Open in IMG/M
3300031938\|Ga0308175_102730804	Not Available	552	Open in IMG/M
3300033502\|Ga0326731_1032470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1247	Open in IMG/M
3300034090\|Ga0326723_0044898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1862	Open in IMG/M
3300034268\|Ga0372943_0091434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.07%
Host-Associated	Host-Associated	28.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.25%
Plants	Host-Associated → Plants	28.93%
Aquatic	Environmental → Aquatic	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.40%
Peat	Environmental → Terrestrial → Peat	1.65%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.76%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	13.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	10.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.13%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300001330	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-5cm)- 6 month illumina	Environmental	Open in IMG/M
3300001526	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-5cm-1A)- 1 week illumina	Environmental	Open in IMG/M
3300001527	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005896	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00947920	2124908043	Soil	MPSPIDAIIHGQWNTAQVEQHQWQLGYAWLEEGQLVHVIFEGYPAGKFPPTCEGGIPCFGGEEAKSETIAGHVVHWFDHNQASHSGHVAAVFASGGNTYVVSIHVASPVSTKAIAKRDLRHIIPSSSLLKPA
AL9A1W_10695232	3300000878	Permafrost	AGWLTWANRVGMPIWCPGWMPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
A305W6_10433932	3300001330	Permafrost	AQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGSVPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYAVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
A105W1_12563941	3300001526	Permafrost	QRQMCIRDRLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
A3513AW1_11454391	3300001527	Permafrost	LEGCSKVWAAGWQTWANRVGMPIWCPGWMPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
C688J35102_1209851306	3300002568	Soil	MTIYCPGWLPSPIDGVVHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFAGREPATEDVGGQTVTWYDHNLASHTGHIAAAFHAGGNVYVISIHVASPVSTPAKAKSDLSHIIRSLVPMHPRT*
soilH2_102850632	3300003324	Sugarcane Root And Bulk Soil	MPVWCPGWMPSPIDAVIHGQWNTARIEGHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSDRVAGHVVHWYDDNHASHSGHVAGIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0062595_1022360621	3300004479	Soil	QLGYAWLEEGQLVHVIFEGYPRGTFPPRCEGVACFGGEEPAAEQIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0066823_101181371	3300005163	Soil	IYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPDCEGTPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHAGGNIYVISIHVASPVSTAADAKTDLRHIIRSLAPVRPGG*
Ga0066815_100129932	3300005164	Soil	WADRVGMTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPTCEGTPCFAGREPETEDVGGRTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPTVAKSDLRHVIRSLVPVKPET*
Ga0066676_105347871	3300005186	Soil	GQWNTARVPDKQWQLGYAWLEQGQLVHVVFEGYPPGTFPPACEGRPCFAGREPATEPVGGRTVTWYDRNLASHTGHIAAIFHAGGNVYVISVHVASPVSTPAVAKSDLRHIIRSLAPMRPDG*
Ga0070680_1000327481	3300005336	Corn Rhizosphere	QWQLGYAWLEEGQLVHVIFEGYPAGTFPPKCEGVPCFGGEEPASEKIAAHVVHFYDKNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPS*
Ga0070682_1019904591	3300005337	Corn Rhizosphere	SPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0068868_1001041892	3300005338	Miscanthus Rhizosphere	MPVWCPGWMPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEEKVAGHVVHFYDKNHASHSGHIAAVFESGANTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0068868_1002747351	3300005338	Miscanthus Rhizosphere	PSWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA*
Ga0070691_103091022	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	KVRMPVWCPGWMPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0070675_1013153742	3300005354	Miscanthus Rhizosphere	SWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPNTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA*
Ga0070714_1001376103	3300005435	Agricultural Soil	MPVWCPGWMPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0070714_1006017331	3300005435	Agricultural Soil	MPVWCPGWMPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGEEKIAGHVVHFYDENHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAIAKRDLRHMIASSSELKPS*
Ga0070714_1017681301	3300005435	Agricultural Soil	MPVWCPGWMPSPVDAVIHGQWNTARVEQHQWQLGYAWLEQGQLVHVIFEGYPPGTFPPKCEGNVPCFGGEEAATTTIGGHTVHWYDRNHASHSGHIAAVYRSDGDTYVVSIHVASPVS
Ga0070710_114985301	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	WMPSPIDAIIHGQWNTAEVEQHQWQLGYAWLEQGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPKTTKIAGHTVRWYDRNHASHTGHIAAVFQSNGNTYVVSIHVISPVTTKAIAKRDLAHIIASSSLLKPA*
Ga0070711_1019440301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPVWCPGWMPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGEEKIAGHVVHFYDENHASHSGHVAAVFKSGPNTYVVSIHVASPVSTK
Ga0066681_105302232	3300005451	Soil	KTWMAGWQKWADRVGMPVWCPGWMPSPVDAIIHGQWNTARIEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPDCEGVPCFGGEEPGAEKIAGHVVHFYDNNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKELAKRDLRHIIGSSSELKPS*
Ga0070681_100551381	3300005458	Corn Rhizosphere	MPVWCPGWMPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0070695_1008994411	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPS*
Ga0070693_1013548251	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	AIIHGQWNTARIQQHQWQLGYAWLEEDQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSRHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDVRHIISSSTELKPS*
Ga0066670_104022822	3300005560	Soil	TAEVAQRQWQLGYAWLETGQLVHVIFEGYPPGTFPPTCEGGVPCFGGEEPKPTTIAGHVVHWYDRNHASHSGHVAAVFASHGNTYVVSIHVASPVSTRAMAKRDLAHIISSSSLLEPA*
Ga0068856_1024496591	3300005614	Corn Rhizosphere	WKAGWQKWTDKVGMPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELEPS*
Ga0068852_1003809022	3300005616	Corn Rhizosphere	YAWLEEGQLVHVVFEGYPAGTFPPRCEGVPCFGGEEPGSQTIAGHAVHWYDHNHASHSGHVAAIFRSGPDTYVVSIHVASPVSTKAIAKRDLRHIISSSSELEPS*
Ga0068866_102817011	3300005718	Miscanthus Rhizosphere	VGMTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPDCEGTPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHAGGNIYVISIHVASPVSTAADAKTDLRHIIRTLAPVRPGG*
Ga0066903_1089000861	3300005764	Tropical Forest Soil	KTWKAGWQKWTDKVGMPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGTEKVADHIVHFYDKNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELQPS*
Ga0068858_1013759992	3300005842	Switchgrass Rhizosphere	TVWKAGWQKWTDKVGMPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPDCEGVPCFGGEEPGSENIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELKPS*
Ga0075292_10647942	3300005887	Rice Paddy Soil	PDRQWQLGYAWLEQGQLVHVVFEGYPPGTFPPTCEGRPCFGGREATTEEVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKADLRHIIRSLAPVKPEA*
Ga0075282_10732521	3300005896	Rice Paddy Soil	PSPIDGVIHGEWNTARVPDRQWQLGYAWLEQGQLVHVVFEGYPPGTFPPTCEGRPCFGGREATTEEVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKADLRHIIRSLAPVKPEA*
Ga0066651_102594952	3300006031	Soil	ASWQTWADRVGMPIYCPAWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGDLVHVVFEGYPPGTFPPTCEGTPCFGGREPKTEQIAGHPVTWYDHNLASHTGHIAAIFPSLGNVYVISIHVATPVSTAADAKADLRHVIRSLALVKPRN*
Ga0070712_1017687512	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GWQKWADKVGMPVWCPGWMPSPVDAVIHGQWNTAEVAQHQWQLGYAWLEQGQLVHVIFEGYPPGTFPPKCEGNVPCFGGEEAAASTIGGHTVHWYDRNHASHSGHVAAVYQSGGNTYVVSIHVASPVSTKAVAKRDLAHIIGSSSLLKPR*
Ga0070712_1020454431	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPKTTKIAGHTVRWYDRNHASHTGHIAAVFQSNGNTYVVSIHVISPISTKAIAKRDLSHIIASSSVLKPA*
Ga0079222_101750631	3300006755	Agricultural Soil	MPVWCPGWMPSPVDAIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTELNPS*
Ga0079221_103768381	3300006804	Agricultural Soil	MPVWCPGWMPSPVDAIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTEL
Ga0075433_113175111	3300006852	Populus Rhizosphere	RVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPNCEGVPCFGGEEPGTENIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELTPS*
Ga0075434_1011008141	3300006871	Populus Rhizosphere	IHGQWNTARVPDKQWQLGYAWLENGDLVHVVFEGYPPGTFPPTCEGTPCFGGREPKTEQIAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKTDLRHIIRSLAPVKPAA*
Ga0075434_1023475491	3300006871	Populus Rhizosphere	AIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPNCEGVPCFGGEEASSEKVGGHVVRWYDHNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0075424_1010746901	3300006904	Populus Rhizosphere	MPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPNCEGVPCFGGEEASSEKVGGHVVRWYDHNHASHSGHIAAVFKSGPNTYVVSIHVASP
Ga0075424_1014293812	3300006904	Populus Rhizosphere	IIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPRGTFPPNCEGVPCFGGEEPGAERIAGHVVHFYDKNHASHSGHIAAVFTSRPDTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0074063_135244301	3300006953	Soil	DGVIHGQWNTARVPDKQWQLGYAWLEQGELVHIVFEGYPPGTFPPTCEGTPCFAGREPATENVGGRTVTWYDHNLASHTGHVAAIFHAGGNVYVISIHVASPVSTPAVAKSDLRHVIRSLVPVKPESSDR*
Ga0099827_117645751	3300009090	Vadose Zone Soil	MTVYCPGWLPSPIDGVIHGQWNTARVPDRQWQLGFAWLEQGQLVHVVFEGYPPGTFPPRCEGQPCFAGREPGTQTIAGHVVTWYDHNLASHTSHIAAIFRTPPDVYVVSIHVADPITTKAIAKADL
Ga0105240_102231213	3300009093	Corn Rhizosphere	IDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0105240_105635961	3300009093	Corn Rhizosphere	MPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEDKVAGHVVHFYDKNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0105247_110443472	3300009101	Switchgrass Rhizosphere	GYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGEEKIAGHVVHFYDKNHASLSGHIAAVFKSGPNTFVFSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0105243_118442621	3300009148	Miscanthus Rhizosphere	MIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEEKVAGHVVHFYDKNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0105237_127358711	3300009545	Corn Rhizosphere	MPSPVDAIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTELKPS*
Ga0134125_108978601	3300010371	Terrestrial Soil	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0134125_114452591	3300010371	Terrestrial Soil	MPVWCPGWMPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPKCEGVPCFGGEEPATEKIAGHVVHFYDKNHASHSGHIAAIFKSGPDTYVASIHVASPVSTKAIAKRDLRHIIASSSELKPS*
Ga0134128_101550602	3300010373	Terrestrial Soil	MPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPHGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0105239_103587591	3300010375	Corn Rhizosphere	MPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEEKVAGHVVHFYDKNHASHSGHIAAVFESGANTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0105239_112083202	3300010375	Corn Rhizosphere	WTDKVGMPVWCPGWMPSPVDAIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTELKPS*
Ga0134127_102894671	3300010399	Terrestrial Soil	MPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPDCEGVPCFGGEEPGSENIAGHVVHFYDKNHASHSGHIAAVFESGANTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0151489_12315771	3300011106	Soil	GWLPSPIDGVIHGQCNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPDCEGTPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHAGGNIYVISIHVASPVSTAADAKTDLRHIIRSLAPVRPGG*
Ga0151490_14533911	3300011107	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHMVFEGYPPGTFPPTCEGTPCFAGREPATENVGGRTVSWYDRNLASHTGHVAAIFHAGGNVYVISIHVASPVSTPAVAKSDLRHVIRSLVPVKPET*
Ga0105246_112189051	3300011119	Miscanthus Rhizosphere	MPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEEKVAGHVVHFYDKNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0120114_10151263	3300011998	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSRSLLKPE*
Ga0120163_10693251	3300012003	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILS
Ga0120134_10223901	3300012004	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGSVPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYAVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
Ga0137387_107476621	3300012349	Vadose Zone Soil	MTVYCPGWLPSPIDGVIHGQWNTARVPQRQWQLGYAWLEQGQLVHVIFEGYPPGTFPPRCEGKPCFSGREPGTETVSGHAVTWYDHNLASHTGHIAAVFRAGPDTYVVSAHVATPISTKAIAKADLAHIIRSMVPLHPSG*
Ga0137371_104094901	3300012356	Vadose Zone Soil	MPSPVDAIIRGQWNTAQVEQHQWQLGYAWLEQGQLVHVIFEGYPAGTFPPTCEGGVPCFGGEEAKPETIAGHVVRWYDRNHASHSGHVAAVFASGGNTYVVSIHVDSPVSTRAIAKRDLRHIIS
Ga0157329_10192022	3300012491	Arabidopsis Rhizosphere	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGQLVHVVFEGYPPGTFPPVCEGQPCFGGREPKTEQIAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA*
Ga0164298_102084592	3300012955	Soil	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNAYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0164303_100942882	3300012957	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPDCEGTPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHAGGNIYAISIHVASPVSTAA
Ga0164301_106955093	3300012960	Soil	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVAS
Ga0164301_106987052	3300012960	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFAGREPATEKVGGQTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPAKARSDLRHIIRSLVPMQPES*
Ga0164309_103713262	3300012984	Soil	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAVFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0164309_106881032	3300012984	Soil	VPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFAGREPATEKVGGQTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPAKARSDLRHIIRSLVPMQPES*
Ga0164309_119763191	3300012984	Soil	GWMPSPIDAIIHGQWNTAEVEQHQWQLGYAWLEQGQLVHVIFEGYPAGTFPPTCEGGVPCFGGREAKPQTIAGHVVHWYDHNQASHSGHVAAVFASGGNTYVVSIHVASPVSTKAIAKRDLRHIIASSSLLKPA*
Ga0164308_103835921	3300012985	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFAGREPATEKVGGQTVTWYDHNLASHTGHIAAIFHPGGNVYVTSIHVESPVSTPAKARSDLRHIIRSLVPMQPES*
Ga0164307_103161683	3300012987	Soil	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISS
Ga0164305_101431482	3300012989	Soil	IDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS*
Ga0164305_112666992	3300012989	Soil	VIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFGGREPATETVGGQTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPAKARSDLRHIIRSLVPMQPES*
Ga0157374_100995651	3300013296	Miscanthus Rhizosphere	MPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEDKVAGHVVHFYDKNHASHSGHIAAVFKSGANTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS*
Ga0157372_102026491	3300013307	Corn Rhizosphere	IDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPRGTFPPRCEGVACFGGEEPAAEQIAGHVVHFYDKNHASHSGHIAAIFKSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT*
Ga0157372_104921552	3300013307	Corn Rhizosphere	DAIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTELKPS*
Ga0157375_112682251	3300013308	Miscanthus Rhizosphere	WKAGWQKWTDKVGMPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPDCEGVPCFGGEEPGSENIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELKPS*
Ga0120127_101920691	3300013503	Permafrost	MPGPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGEFPPTCEGNVPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGYTYVVSIHVASPVSTKAIAKRDLRHIVVS
Ga0120147_10363941	3300013758	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRQGLAIEFRA*
Ga0120181_10103734	3300013766	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
Ga0120155_11279431	3300013768	Permafrost	ARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDRNHASHSGHIAAVFTWHGKTYVVSIHVASPVSTKAIAKRDLRHIIVSSSVLKPE*
Ga0120158_101975332	3300013772	Permafrost	MPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDRNHASHSGHIAAVFTWHGKTYVVSIHVASPVSTKAIAKRDLRHIVESSSLLKPA*
Ga0120125_10316431	3300014056	Permafrost	QWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGDTYVVSIHVASPVSTKVIAKRDLRHIILSSSLLKPE*
Ga0182008_100731381	3300014497	Rhizosphere	MPVWCPGWMPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPAGTFPPRCEGVPCFGGEEPGSQTIAGHAVHWYDHNHASHSGHVAAIFRSGPDTYVVSIHVASPVWTKAIAKRDLR
Ga0157377_110272891	3300014745	Miscanthus Rhizosphere	LPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA*
Ga0167642_10083523	3300015160	Glacier Forefield Soil	MPIWCPGWMPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNVPCFGGEEPKSETIAGHVVHWYDRNHASHTGHIAAVFIWHGDTYVVSIHVASPVSTKAVAKRDLRHIILSSSLLKPE*
Ga0132258_120324121	3300015371	Arabidopsis Rhizosphere	PSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPNTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA*
Ga0132258_120456642	3300015371	Arabidopsis Rhizosphere	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGQLVHVVFEGYPPGTFPPRCEGQPCFAGREPATEEVGGQTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVATPVSTPAKAKSDIRHIIRSLVPMQPAT*
Ga0132257_1002703732	3300015373	Arabidopsis Rhizosphere	MTIYCPGWLPSPIDGVINGQWNTARVPDKQWQLGYAWLEQGQLVHVVFEGYPPGTFPPVCEGQPCFGGREPKTEQIAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRRIIRSLAPVKPKT*
Ga0193728_12853761	3300019890	Soil	APQGCSKVWAAGWQTWANRVGMPIWCPGWMPDPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGSVPCFGGEEPKSETIAGHVVHWYDHNHASHSGHIAAVFTWHGYTYVVSIHVASPVSTKAIAKRDLRHIVVSSSLLKPE
Ga0206356_112435781	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	AIIHGQWNTARIQQHQWQLGYAWLEEGQLVHVVFEGYPAGTFPPRCEGVPCFGGEEAGSERVGGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSTELKPS
Ga0206356_115008281	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	GQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPDCEGVPCFGGEEPGSENIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELKP
Ga0210381_100767262	3300021078	Groundwater Sediment	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPKCEGQPCFAGREPATEEVGGQTVTWYEHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPAKAKSDLRHIIRSLVSMQPES
Ga0208078_10474302	3300025544	Arctic Peat Soil	MPVWCPGWMPSPIDAIIHGQWNTAQVEQHQWQLGYAWLEQGQLVHVIFEGYPHGTFPPTCEGGVPCFGGEEAKSVTIAGHVVHWYDHNQASHSGHIAAVFSSGGNTYVVSIHVVTPVSTKAIAKRDLRHIVESSSLLKPA
Ga0207930_10860942	3300025604	Arctic Peat Soil	QWNTAEVEQHQWQLGYAWLELGGLVHVIFEGYPAGTFPPKCGGVPCFQGEEATPEKIAGHVVHWYDHNHSSHTGHIAAVFVSGGNTYVVSIHVIPPVSTRARAKSDLRNIIRSSSLLKPE
Ga0207692_100723251	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TDKVGMPVWCPGWMPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS
Ga0207692_109403021	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	WAAGWQRWTDKVGMPVWCPGWMPSPIDAIIHGQWNTAEVEQHQWQLGYAWLEQGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPKTTKIAGHTVRWYDRNHASHTGHIAAVFQSNGNTYVVSIHVISPVTTKAIAKRDLAHIIASSSLLKPA
Ga0207642_101532952	3300025899	Miscanthus Rhizosphere	NTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA
Ga0207685_106602471	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	IYCPSWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA
Ga0207707_100053404	3300025912	Corn Rhizosphere	MPVWCPGWMPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT
Ga0207693_102818582	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS
Ga0207663_100973162	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MPVWCPGWMPSPIDAIIHGQWNTAQVEQRQWQLGYAWLEEGQLVHVIFEGYPPGTFPPNCEGVPCFGGEEPGSENIAGHVVHFYDHNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELKPS
Ga0207652_106342712	3300025921	Corn Rhizosphere	WQTWADRVGMPIYCPSWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLENGQLVHVVFEGYPPGTFPPMCEGQPCFGGREPETEQVAGRTVTWYDHNLASHTGHIAAMFHSLGNVYVISIHVATPVSTAADAKSDLRHIIRSLAPVQPKA
Ga0207640_104584332	3300025981	Corn Rhizosphere	VEQHQWQLGYAWLEEGQLVHVIFEGYPQGTFPPRCEGVACFGGEEPAAEKIAGHVVHFYDKNHASHSGHIAAIFRSGPDTYVVSIHVASPVSTKAVAKRDLRHIISSMSELKPT
Ga0207703_115759062	3300026035	Switchgrass Rhizosphere	QLGYAWLEEEQLVHVVFEGYPPGTFPPDCEGVPCFGGEEPGSENIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELKPS
Ga0207702_102454612	3300026078	Corn Rhizosphere	MPVWCPGWMPSPVDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPTCEGVPCFGGEEPGEEKVAGHVVHFYDKNHASHSGHIAAVFESGANTYVVSIHVASPVSTKAVAKRDLRHIISSSSELRPS
Ga0207702_121919551	3300026078	Corn Rhizosphere	WKAGWQKWTDKVGMPVWCPGWMPSPIDAIIHGQWNTARVEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPKCEGVPCFGGEEPGSETIAGHVVHWYDHNHASHSGHIAGIFRSGSNTYVVSIHVASPVSTKAIAKRDLRHIISSSSELEPS
Ga0209178_10518351	3300027725	Agricultural Soil	VEQHQWQLGYAWLEEGQLVHVVFEGYPPGTFPPNCEGVPCFGGEEPGSKNIAGHVVHFYDKNHASHSGHIAAIFKSGPNTYVVSIHVASPVSTKAIAKRDLRHIIASSSELKPS
Ga0307288_100574151	3300028778	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPKCEGQPCFAGREPATEEVGGQTVTWYEHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPA
Ga0307299_100308061	3300028793	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPKCEGQPCFAGREPATEEVGGQTVTWYEHNLASHTGHIAAIFHAGGNVYVISIHVA
Ga0307308_102507171	3300028884	Soil	QTWADRVGMTIYCPGWLPSPIDGVIHGQWNTARVPDEQWQLGYAWLEQGELVHVVFEGYPPGTFPPSCEGTPCFGGREPRVEPVGGRAVTWYDHNLASHTGHIAAIFHADGNVYVISIHVASPVSTPAVAKSDLRHIIRSLAPVRPGG
Ga0247826_105049101	3300030336	Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPRCEGRPCFAGHEPATEKVGGQTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTPAKAKSDLRHIIRSLVPMHPES
Ga0307499_100978771	3300031184	Soil	GWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVVFEGYPPGTFPPDCEGTPCFGGREPKTEQVAGRTVTWYDHNLASHTGHIAAIFHAGGNVYVISIHVASPVSTAADAKTDLRHIIRSLAPVRPGG
Ga0308175_1027308041	3300031938	Soil	KAGWQKWTDRVGMPVWCPGWMPSPIDAIIHGQWNSARVEQHQWQLGYAWLEEGQLVHVIFEGYPPGTFPPKCEGAPCFGGEEPATEKIAGHVVHFYDKNHASHSGHIAAIFKSGPDTYVASIHVASPVSTKAIAKRDLRHIIASSSELKPS
Ga0326731_10324702	3300033502	Peat Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDRQWQLGYAWLEQGELVHVVFEGYPPGTFPPTCEGTPCFAGREPATENVGGRTVTWYDHNLASHTGHVAAIFHAGGNVYVISIHVASPVSTPTVAKSDLRHVIRSLVPVKPEG
Ga0326723_0044898_1138_1560	3300034090	Peat Soil	MTIYCPGWLPSPIDGVIHGQWNTARVPDKQWQLGYAWLEQGELVHVIFEGYPPGTFPPTCEGTPCFAGREPATEDVGGRTVTWYDHNLASHTGHIAAIFRADGNVYVISIHVASPVSTPTVAKSDLRHVIRSLVPVKPEG
Ga0372943_0091434_680_1102	3300034268	Soil	MPIWCPGWMPGPIDAIIHGQWNTARVAQHQWQLGYAWLEIGQLVHVIFEGYPPGTFPPTCEGNIPCFGGEEPKAETIAGHVVHWYDRNQASHSGHIAAVFTWHGYTYVVSIHVASPVSTKAVAKRDLRHIILSSSLLKPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences