Metagenome / Metatranscriptome Family F072535

Basic Information
Family ID	F072535
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	41 residues
Representative Sequence	LMRMESKNLDESIGMADYDNAMRKASSLDIANTSPSMRH
Number of Associated Samples	108
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Bacteria (96.694 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.017 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.36% β-sheet: 0.00% Coil/Unstructured: 71.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01722	BolA	66.12
PF03471	CorC_HlyC	13.22
PF13671	AAA_33	6.61
PF08433	KTI12	1.65
PF01761	DHQ_synthase	1.65
PF00215	OMPdecase	0.83
PF01202	SKI	0.83
PF00043	GST_C	0.83
PF04392	ABC_sub_bind	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4088	tRNA uridine 5-carbamoylmethylation protein Kti12 (Killer toxin insensitivity protein)	Translation, ribosomal structure and biogenesis [J]	1.65
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.83
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.69 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.39 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	93.39 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	93.39 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	47.93 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	43.80 %
Unclassified	root	N/A	3.31 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5.79 %
Unclassified	root	N/A	3.31 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.83 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5.79 %
Unclassified	root	N/A	3.31 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.83 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2046860001\|MiccSOB_F3TY2AH02H3F68	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
2140918008\|ConsensusfromContig278512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300001593\|JGI12635J15846_10899398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	505	Open in IMG/M
3300001661\|JGI12053J15887_10470307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	601	Open in IMG/M
3300002155\|JGI24033J26618_1042566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	637	Open in IMG/M
3300002914\|JGI25617J43924_10230765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	621	Open in IMG/M
3300003659\|JGI25404J52841_10104947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300005327\|Ga0070658_10975747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	737	Open in IMG/M
3300005328\|Ga0070676_10708919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300005328\|Ga0070676_10983238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300005343\|Ga0070687_100468432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	842	Open in IMG/M
3300005535\|Ga0070684_102133370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	529	Open in IMG/M
3300005538\|Ga0070731_10964360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300005598\|Ga0066706_10333809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1199	Open in IMG/M
3300005598\|Ga0066706_10493423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	975	Open in IMG/M
3300005602\|Ga0070762_11269328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	511	Open in IMG/M
3300005615\|Ga0070702_100747574	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005617\|Ga0068859_100288289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1734	Open in IMG/M
3300005618\|Ga0068864_102098601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	571	Open in IMG/M
3300005712\|Ga0070764_10895598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	556	Open in IMG/M
3300005712\|Ga0070764_11077141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300006046\|Ga0066652_100322397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1380	Open in IMG/M
3300006047\|Ga0075024_100097632	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300006048\|Ga0075363_100688936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300006050\|Ga0075028_100869214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300006051\|Ga0075364_10148744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1578	Open in IMG/M
3300006176\|Ga0070765_101749035	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006195\|Ga0075366_10183721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1270	Open in IMG/M
3300006195\|Ga0075366_10738894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	611	Open in IMG/M
3300006353\|Ga0075370_10637385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	647	Open in IMG/M
3300006638\|Ga0075522_10032052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3181	Open in IMG/M
3300009012\|Ga0066710_101697029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	961	Open in IMG/M
3300009094\|Ga0111539_10848089	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300009098\|Ga0105245_11175367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	815	Open in IMG/M
3300009649\|Ga0105855_1110331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300010039\|Ga0126309_10015329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	3249	Open in IMG/M
3300010321\|Ga0134067_10348920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	582	Open in IMG/M
3300010375\|Ga0105239_12355800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300010862\|Ga0126348_1146265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300011119\|Ga0105246_11339250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300012189\|Ga0137388_11484374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	615	Open in IMG/M
3300012203\|Ga0137399_10230243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1514	Open in IMG/M
3300012205\|Ga0137362_11659145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300012205\|Ga0137362_11756486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300012212\|Ga0150985_102841225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300012212\|Ga0150985_107857040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	821	Open in IMG/M
3300012356\|Ga0137371_10142871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1875	Open in IMG/M
3300012582\|Ga0137358_10349489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1001	Open in IMG/M
3300012582\|Ga0137358_11098410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300012927\|Ga0137416_11395472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	634	Open in IMG/M
3300012930\|Ga0137407_11099068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	754	Open in IMG/M
3300013105\|Ga0157369_10939201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	886	Open in IMG/M
3300013105\|Ga0157369_12394224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	535	Open in IMG/M
3300013297\|Ga0157378_12056987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	621	Open in IMG/M
3300013308\|Ga0157375_10639149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1221	Open in IMG/M
3300014325\|Ga0163163_13150695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300015053\|Ga0137405_1311183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	942	Open in IMG/M
3300015160\|Ga0167642_1060231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	559	Open in IMG/M
3300016294\|Ga0182041_12182880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	517	Open in IMG/M
3300018027\|Ga0184605_10470981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300019878\|Ga0193715_1120930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300019883\|Ga0193725_1044722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1146	Open in IMG/M
3300020062\|Ga0193724_1068022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	745	Open in IMG/M
3300021088\|Ga0210404_10856841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300021168\|Ga0210406_10994169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300021170\|Ga0210400_11628999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	509	Open in IMG/M
3300021404\|Ga0210389_10737570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	771	Open in IMG/M
3300021405\|Ga0210387_11051468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	712	Open in IMG/M
3300022561\|Ga0212090_10942552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	501	Open in IMG/M
3300022694\|Ga0222623_10264010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	663	Open in IMG/M
3300022908\|Ga0247779_1084509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	829	Open in IMG/M
3300025862\|Ga0209483_1003518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10266	Open in IMG/M
3300025910\|Ga0207684_10864667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	762	Open in IMG/M
3300025961\|Ga0207712_10283465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1353	Open in IMG/M
3300025981\|Ga0207640_10664245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	889	Open in IMG/M
3300025981\|Ga0207640_11371935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	633	Open in IMG/M
3300025986\|Ga0207658_10512868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300025986\|Ga0207658_11611204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300026023\|Ga0207677_11723140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
3300026118\|Ga0207675_100366014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1415	Open in IMG/M
3300026222\|Ga0209862_1073459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300026377\|Ga0257171_1049309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300026508\|Ga0257161_1052366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	826	Open in IMG/M
3300026508\|Ga0257161_1102689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	596	Open in IMG/M
3300026537\|Ga0209157_1190887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	878	Open in IMG/M
3300027521\|Ga0209524_1126915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	531	Open in IMG/M
3300027546\|Ga0208984_1048721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	902	Open in IMG/M
3300027610\|Ga0209528_1115120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300027735\|Ga0209261_10170794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	580	Open in IMG/M
3300027778\|Ga0209464_10229373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	667	Open in IMG/M
3300027894\|Ga0209068_10175367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1170	Open in IMG/M
3300027902\|Ga0209048_10306863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1111	Open in IMG/M
3300027915\|Ga0209069_10734371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300028047\|Ga0209526_10033311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3625	Open in IMG/M
3300028047\|Ga0209526_10107578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1962	Open in IMG/M
3300028590\|Ga0247823_11509369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300028819\|Ga0307296_10076184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1785	Open in IMG/M
3300028824\|Ga0307310_10164592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1031	Open in IMG/M
3300028824\|Ga0307310_10426309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	661	Open in IMG/M
3300029923\|Ga0311347_10981369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300030294\|Ga0311349_11094821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	745	Open in IMG/M
3300030580\|Ga0311355_11690564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300030677\|Ga0302317_10040309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2400	Open in IMG/M
3300030737\|Ga0302310_10481805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	668	Open in IMG/M
3300030943\|Ga0311366_11935218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	502	Open in IMG/M
3300031027\|Ga0302308_10298490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	995	Open in IMG/M
3300031198\|Ga0307500_10122449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	719	Open in IMG/M
3300031446\|Ga0170820_16119347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	506	Open in IMG/M
3300031474\|Ga0170818_103798945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300031507\|Ga0307509_10793517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	612	Open in IMG/M
3300031616\|Ga0307508_10467291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	855	Open in IMG/M
3300031788\|Ga0302319_10577311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1179	Open in IMG/M
3300031902\|Ga0302322_101070923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	973	Open in IMG/M
3300031903\|Ga0307407_11173671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	599	Open in IMG/M
3300032002\|Ga0307416_103548304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300032004\|Ga0307414_11421978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300032211\|Ga0310896_10503658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	664	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.07%
Host-Associated	Host-Associated	28.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.16%
Plants	Host-Associated → Plants	28.93%
Aquatic	Environmental → Aquatic	9.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.26%
Peat	Environmental → Terrestrial → Peat	7.44%
Roots	Host-Associated → Plants → Roots	6.61%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Sediment	Environmental → Aquatic → Sediment	4.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.84%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.96%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	4.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Storm Water	Environmental → Aquatic → Freshwater → Storm Water	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Glacier	Environmental → Aquatic → Freshwater → Ice → Glacier	0.83%
Drainage Pipe Biofilm	Environmental → Aquatic → Freshwater → Storm Water → Drainage Pipe Biofilm	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	4.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.31%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.31%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Glacier Valley	Environmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley	0.83%
Concrete Drainage Pipe Biofilm	Environmental → Aquatic → Freshwater → Storm Water → Drainage Pipe Biofilm → Concrete Drainage Pipe Biofilm	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2046860001	Concrete drainage pipe biofilm microbial communities from Ohio, US - sample 12382	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300022561	Borup_combined assembly	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026222	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MiccSOB_99650	2046860001	Concrete Drainage Pipe Biofilm	FALSLLGLMRMESKNFDESIAMADYDNATRKASSLDIAKPSLSIRH
Bog_all_C_03200270	2140918008	Soil	RMESKNFDESIGMADYDNAMRKASSLDIANTSLSMRH
JGI12635J15846_108993981	3300001593	Forest Soil	RMESKNLDESIGMADYDNAMRKASSLDIANTSPSMRH*
JGI12053J15887_104703071	3300001661	Forest Soil	RMESKNLDESIGMADYDNAMRKASSLDIAKPSLSMRH*
JGI24033J26618_10425663	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	LGLMRMESKNLDESIAMANFDYAIAKASSLDIANTSLRIRH*
JGI25617J43924_102307651	3300002914	Grasslands Soil	GLMRMESKNFDESIGIADYDNAMRKASSLDIANTSLSMRH*
JGI25404J52841_101049471	3300003659	Tabebuia Heterophylla Rhizosphere	TLLGLMRMESKNLDESIGMADFDYAMPAASSLDIANPSLRWXH*
Ga0070658_109757471	3300005327	Corn Rhizosphere	ACCFALSLLGLMRMESKNLDESIGMTDYDNATRKASSLDIANTSLLIRH*
Ga0070676_107089193	3300005328	Miscanthus Rhizosphere	LLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0070676_109832383	3300005328	Miscanthus Rhizosphere	LLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRIRH*
Ga0070687_1004684321	3300005343	Switchgrass Rhizosphere	FALSLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0070684_1021333701	3300005535	Corn Rhizosphere	LGLMRMESKNLDESIAMTDFDYAMPKASSLDIANTSIRVQD*
Ga0070731_109643602	3300005538	Surface Soil	SLLGLMRMESKNFDESIGMADYDNAMLKASSLDIAKPSLPMRH*
Ga0066706_103338093	3300005598	Soil	CFALSLLGLMRMESKNFDESIGMADYDNAMRKASSLDIANPSLSMRH*
Ga0066706_104934233	3300005598	Soil	CFALSLLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSLSMRH*
Ga0070762_112693282	3300005602	Soil	MESKNLDESIGMADYDNAMRKASSLDIANPSLSMRH*
Ga0070702_1007475741	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMHH*
Ga0068859_1002882891	3300005617	Switchgrass Rhizosphere	MRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0068864_1020986011	3300005618	Switchgrass Rhizosphere	ESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0070764_108955983	3300005712	Soil	LSLLGLMRMESKNLDESIGMADYDYAIPKASSLDIANPSILIRH*
Ga0070764_110771412	3300005712	Soil	LALSLFGLIRMESKNLDESMGMADYDNAMRNASSLDIANPSLSMRH*
Ga0066652_1003223973	3300006046	Soil	RMESKNLDESIGMADYDNATHKASSLDIANSSLSMGN*
Ga0075024_1000976321	3300006047	Watersheds	ESKNLDESIGMADYDNAMRKASSLDIANTSPSMRH*
Ga0075363_1006889363	3300006048	Populus Endosphere	LSLLGLMRMESKNLDESIAMANFDYAMPEASSLDIANTSVRMNH*
Ga0075028_1008692143	3300006050	Watersheds	LLGLMRMESKNFDESIGMADYDNAMRKASSLDIAKLSLPIRH*
Ga0075364_101487444	3300006051	Populus Endosphere	LGLMRMESKNLDESIAMTDFDYAMPVASSLDIANYSVRVRY*
Ga0070765_1017490353	3300006176	Soil	ESKNFDESIGMADYDNAMRKASSLDIAKPYLSTRH*
Ga0075366_101837214	3300006195	Populus Endosphere	ESKNLDESIAMADFDYAMPEASSLDIANTSVRMRH*
Ga0075366_107388942	3300006195	Populus Endosphere	LMRMESKNLDESIGMADFDYAMPAASSLDIANPSLPICH*
Ga0075370_106373851	3300006353	Populus Endosphere	SKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0075522_100320521	3300006638	Arctic Peat Soil	SLLGLMRMESKNFDESIGMADYDNAMPKASSLDIAKPSILIRH*
Ga0066710_1016970293	3300009012	Grasslands Soil	FALSLLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSLSMRH
Ga0111539_108480891	3300009094	Populus Rhizosphere	FALTLLGLMRMESKNLDESIGIADFDYAMRKASSLDIANTSVRMHH*
Ga0105245_111753671	3300009098	Miscanthus Rhizosphere	MESKNLDESIGMADFDYAMAKAASLDIAKPSLSMSH*
Ga0105855_11103313	3300009649	Permafrost Soil	SLLGLMRMLSKNLDESIGMADYDNATLTASSLDIAKLSSLMRH*
Ga0126309_100153295	3300010039	Serpentine Soil	FGLIRMESKNLDESIGMADYDNAMRKASSLDIANTSLSICH*
Ga0134067_103489201	3300010321	Grasslands Soil	SLLGLIRMESKNLDESIGMADYDNATHKASSLDIANSSLSMGN*
Ga0126370_110725161	3300010358	Tropical Forest Soil	RARASCLAFSLFGLMRMESKNFDVSIGMTDFDYAMRKASSLDIPIP*
Ga0105239_123558002	3300010375	Corn Rhizosphere	SLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0126348_11462652	3300010862	Boreal Forest Soil	LLGLMRMESKNLDESIAMSNFDYAMPEASSLDIANTSLRMRH*
Ga0105246_113392503	3300011119	Miscanthus Rhizosphere	ACCFALSLLGLMRMESKNLDESIGMADFDYAMPKASSLDIANTSVSIWH*
Ga0137388_114843741	3300012189	Vadose Zone Soil	MESKNFDESIGMADYDNAMRKASSLDIAKPSPSMRH*
Ga0137399_102302431	3300012203	Vadose Zone Soil	ESKNFDESIGMADYDNAMRKASSLDIAKPSPSMRH*
Ga0137362_116591452	3300012205	Vadose Zone Soil	LGLMRIESKNFDESIGMADYDNAMRKASSLDIAKPSLLMRH*
Ga0137362_117564862	3300012205	Vadose Zone Soil	ALSLLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSLSMRH*
Ga0150985_1028412252	3300012212	Avena Fatua Rhizosphere	SLLGLMRMESKNLDESIGMADFDYAMPEASSLDIANTSLLIRH*
Ga0150985_1078570403	3300012212	Avena Fatua Rhizosphere	LGLMRMESKNLDESIGMADYDNATHKASSLDIANSSLSMGN*
Ga0137371_101428711	3300012356	Vadose Zone Soil	SKNFDESIGMADYDNAMRKASSLDIANPSLSMRH*
Ga0137358_103494893	3300012582	Vadose Zone Soil	LLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSPSMRH*
Ga0137358_110984102	3300012582	Vadose Zone Soil	LLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSPSMQH*
Ga0137416_113954723	3300012927	Vadose Zone Soil	LGLMRMESKNFDESIGMADYDNAMRKASSLDIAKPSLLMRH*
Ga0137407_110990683	3300012930	Vadose Zone Soil	LLGLMRMESKNLDESIGMADFDYATRKASSLDIANTFNSRPRH*
Ga0157369_109392011	3300013105	Corn Rhizosphere	LMRMESKNLDESIAMTDFDYAMPVASSLDIANYSVRVRY*
Ga0157369_123942242	3300013105	Corn Rhizosphere	GLMRMESKNFDESIGMTDFDYAIPKPSSLDIVNSWIGE*
Ga0157378_120569872	3300013297	Miscanthus Rhizosphere	LGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0157375_106391493	3300013308	Miscanthus Rhizosphere	LMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH*
Ga0163163_131506952	3300014325	Switchgrass Rhizosphere	CFALSLLGLMRMESKNLDESIGMADFDYAMPEASSLDIANTSLLIRH*
Ga0137405_13111831	3300015053	Vadose Zone Soil	SKNLDESIGMADYDNAMQKASSLDIAKLSLPMRH*
Ga0167642_10602311	3300015160	Glacier Forefield Soil	LMRMLSKNLDESIGMADYDNAMRKASSLDIAKLSR*
Ga0182041_121828801	3300016294	Soil	MLSKNFDESIAMADYDNAMRKASSLDIAITLRFRFADDQFC
Ga0184605_104709812	3300018027	Groundwater Sediment	RMESKNLDASIGMADYDYAMPAASSLDIAKPSLPMCH
Ga0193715_11209302	3300019878	Soil	LMRMESKNFDESIGMTDYDNAMRKASSLDIANTSPSMRH
Ga0193725_10447221	3300019883	Soil	LMRMESKNLDESIGMADYDNAMRKASSLDIANTSPSMRH
Ga0193724_10680223	3300020062	Soil	MRMESKNLDESIGMTDYDNAMRKASSLDIANTSPSMRH
Ga0210404_108568411	3300021088	Soil	LGLMRIESKNLDESIGMADYDNAMRKASSLDIAKPSPSLRH
Ga0210406_109941693	3300021168	Soil	GLIRMESKNLDESIGMADYDNAMRKASSLDIANPSLSMRH
Ga0210400_116289992	3300021170	Soil	LSLFGLMRMESKSFDESIGMTDFDYAMQKPSSLDIAKAFKLPARH
Ga0210389_107375703	3300021404	Soil	LLGLMRMESKNLDESIGMADYDNAMQKASSLDIAKPSLSMRH
Ga0210387_110514683	3300021405	Soil	FALSLLGLMRMESKNLEESIGMADYDNAIGKASSLDIAKPSFSIRH
Ga0212090_109425522	3300022561	Glacier Valley	LLGLMRMLSKNLDESIGMADYDNAMRKASSLDIANTSLS
Ga0222623_102640103	3300022694	Groundwater Sediment	CACCFALSLLGLMRMESKNFEESIGMADYDNAMRKASSLDIANTSPSMRH
Ga0247779_10845091	3300022908	Plant Litter	AFALSLLGLMRMESKNLDESIGMADFDYAMPEASSLDIANTSVRMHH
Ga0179591_11870063	3300024347	Vadose Zone Soil	MAEASRACACCFALSLLGLMRMESKNFEESIGMADYDNAMRKASSLDIANTSQSMRH
Ga0209483_100351812	3300025862	Arctic Peat Soil	RMESKNFDESIGMADYDNAMPKASSLDIAKPSILIRH
Ga0207684_108646671	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ESKNFDESIGMADYDNAMRKASSLDIANTSPSMRH
Ga0207712_102834651	3300025961	Switchgrass Rhizosphere	GLMRIESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0207640_106642451	3300025981	Corn Rhizosphere	LMRIESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0207640_113719353	3300025981	Corn Rhizosphere	ESKNFDESIGMADYDNAMRKASSLDIAKPSLPMRH
Ga0207658_105128683	3300025986	Switchgrass Rhizosphere	SLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMHH
Ga0207658_116112042	3300025986	Switchgrass Rhizosphere	LSLLGLMRIESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0207677_117231401	3300026023	Miscanthus Rhizosphere	MRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMHH
Ga0207675_1003660144	3300026118	Switchgrass Rhizosphere	CACCFALSLLGLMRMESKNLDESIAMANFDYAMPEASSLDIANTSVRMNH
Ga0209862_10734591	3300026222	Permafrost Soil	SLLGLIRMESKNFDESIGMADYDNAMLKASSLDIAKPSLSMRH
Ga0257171_10493093	3300026377	Soil	ESKNFEESIGMADYDNAMRKASSLDIANTSQSMRH
Ga0257161_10523661	3300026508	Soil	LMRMESKNFEESIGMADYDNAMRKASSLDIANTSQSMRH
Ga0257161_11026893	3300026508	Soil	MESKNFDESIGMTDYDNAMRKASSLDIAKPSLLMRH
Ga0209157_11908871	3300026537	Soil	NFDESIAMADFDYAMPAASSLDIANPSSSMAPLTES
Ga0209524_11269151	3300027521	Forest Soil	LMRMESKNFDESIGMADFDYAMRNASSLDIANTSPSMRH
Ga0208984_10487211	3300027546	Forest Soil	LLGLMRMESKNFDESIGMADYDNAMRKASSLDIANTSPSMRH
Ga0209528_11151202	3300027610	Forest Soil	LLGLMRMESKNLDESIGMADYDNATQKASSLDIAKLSLPMRH
Ga0209261_101707943	3300027735	Wetland Sediment	GLMRMLSKNLDESIGMADYDNAMRKASSLDIANTSVRVQH
Ga0209038_101399733	3300027737	Bog Forest Soil	LTRMESKNFDESIGMMNFDYATRKASSLDIANTFNSVKVG
Ga0209464_102293733	3300027778	Wetland Sediment	CFALSLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSLS
Ga0209068_101753674	3300027894	Watersheds	SLLGLMRMESKNLDESIGMADYDNAMRKASSLDIANTSPSMRH
Ga0209048_103068631	3300027902	Freshwater Lake Sediment	LLGLMRMESKNFDESIAMADYDNAMRKASSLDIANTSLPVRH
Ga0209069_107343711	3300027915	Watersheds	SLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0209526_100333111	3300028047	Forest Soil	ESKNFDESIGMADYDNAMRKASSLDIANTSLSMRH
Ga0209526_101075781	3300028047	Forest Soil	CACCFALSLLGLMRMESKNFDESIGMADYDNAMRKASSLDIAKLSLPIHH
Ga0247823_115093692	3300028590	Soil	GLMRMESKNLDESIAMIDFDYAMPKASSLDIANNSVRIRH
Ga0307296_100761841	3300028819	Soil	LMRMESKNLDESIAMADFDYAMPEASSLDIANTSVRMRH
Ga0307310_101645923	3300028824	Soil	CCFALSLLGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMHH
Ga0307310_104263093	3300028824	Soil	MRMESKNFDESIGMTDYDNAMRKASSLDIANTSPSMRH
Ga0311347_109813691	3300029923	Fen	GLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0311349_110948211	3300030294	Fen	MRMESKNLDESIGMADYDNAMPKASSLDIAKPSLSMRH
Ga0311355_116905641	3300030580	Palsa	LGLMRMESKNFDESIGMADYDNAMRKASSLDIAKPSPSMRH
Ga0302317_100403091	3300030677	Palsa	FGLIRMESKNLDESIGMADYDNAMRKASSLDIANISLPMRH
Ga0302310_104818053	3300030737	Palsa	MESKNFDESIGMADYDNAMRKASSLDIAKPSPSMRH
Ga0311366_119352181	3300030943	Fen	LGLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0302308_102984901	3300031027	Palsa	RMESKNFDESIGMADYDNAMRKASSLDIAKPSPSMRH
Ga0307500_101224493	3300031198	Soil	LLGLMRIESKNLDESIAMTDFDYAMPEASSLDIANTSVRMRH
Ga0170820_161193471	3300031446	Forest Soil	MALSLLGLIRMLSKNLDESMGMADYDNAMQKASSLDIAKLSLPMRH
Ga0170818_1037989451	3300031474	Forest Soil	LMRMESKNLDESIGMADFDYAMPEASSLDIANTSLPMCH
Ga0307509_107935171	3300031507	Ectomycorrhiza	RMESKNLDESIGMADYDNAMRKASSLDIAKPSLSMRH
Ga0307508_104672911	3300031616	Ectomycorrhiza	SSRAAACCFALSLLGLMRMESKNLDESIGMADFDYAMPKASSLDIANTSLLMIH
Ga0302319_105773113	3300031788	Bog	LSLFGLIRMESKNLDESIGMADYDNAMRKASSLDIAIPSLSMRH
Ga0302322_1010709231	3300031902	Fen	GLMRMESKNLDESIAMANFDYAMPKASSLDIANTSFRMRH
Ga0307407_111736712	3300031903	Rhizosphere	MESKNLDESIAMTNFDYAMPEASSLDIANTSVRMRH
Ga0307416_1035483041	3300032002	Rhizosphere	GLMRMLSKNLDESIAMADYDNAMQKASSLDIANPSLC
Ga0307414_114219783	3300032004	Rhizosphere	AFALTLLGLMRMESKNLDESIGMADYDYAMRKASSLDIANTSASDAH
Ga0307472_1006476793	3300032205	Hardwood Forest Soil	RARACAFALSLLGLMRMESKNFDESIAMTDFDYAIRKASRLDIAIPSFPGRH
Ga0310896_105036581	3300032211	Soil	GLMRMESKNLDESIAMTDFDYAMPEASSLDIANTSVRMHH

Hidden Markov Model


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