Basic Information | |
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Family ID | F072505 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 121 |
Average Sequence Length | 54 residues |
Representative Sequence | KTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST |
Number of Associated Samples | 108 |
Number of Associated Scaffolds | 121 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 107 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.51 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.182 % of family members) |
Environment Ontology (ENVO) | Unclassified (23.967 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (38.843 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.51 |
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Pfam ID | Name | % Frequency in 121 Family Scaffolds |
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PF00528 | BPD_transp_1 | 39.67 |
PF00005 | ABC_tran | 9.92 |
PF08402 | TOBE_2 | 0.83 |
PF04095 | NAPRTase | 0.83 |
COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
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COG1488 | Nicotinic acid phosphoribosyltransferase | Coenzyme transport and metabolism [H] | 0.83 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 100.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 18.18% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.09% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 5.79% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 5.79% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 5.79% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 5.79% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.96% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 4.13% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.31% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 3.31% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 2.48% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 2.48% |
Sub-Biocrust Soil | Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil | 2.48% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.65% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.65% |
Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 1.65% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.65% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.65% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.65% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.65% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.83% |
Wetland Sediment | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment | 0.83% |
Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.83% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.83% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.83% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 0.83% |
Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 0.83% |
Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.83% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.83% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.83% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.83% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.83% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.83% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
3300001205 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
3300004156 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004778 | Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005180 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 | Environmental | Open in IMG/M |
3300005187 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 | Environmental | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005450 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Environmental | Open in IMG/M |
3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Host-Associated | Open in IMG/M |
3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
3300006034 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105 | Environmental | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009081 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
3300009087 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009789 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28 | Environmental | Open in IMG/M |
3300009804 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 | Environmental | Open in IMG/M |
3300009811 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
3300012350 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG | Environmental | Open in IMG/M |
3300012360 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG | Environmental | Open in IMG/M |
3300012897 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1 | Environmental | Open in IMG/M |
3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
3300012902 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1 | Environmental | Open in IMG/M |
3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
3300014271 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 | Environmental | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300017965 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T | Environmental | Open in IMG/M |
3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
3300018051 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1 | Environmental | Open in IMG/M |
3300018052 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2 | Environmental | Open in IMG/M |
3300018061 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1 | Environmental | Open in IMG/M |
3300018074 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2 | Environmental | Open in IMG/M |
3300018075 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
3300025791 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes) | Environmental | Open in IMG/M |
3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) | Environmental | Open in IMG/M |
3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes) | Environmental | Open in IMG/M |
3300027675 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes) | Environmental | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028587 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3 | Environmental | Open in IMG/M |
3300028711 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150 | Environmental | Open in IMG/M |
3300028787 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381 | Environmental | Open in IMG/M |
3300028796 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141 | Environmental | Open in IMG/M |
3300028799 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123 | Environmental | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
3300031366 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S | Environmental | Open in IMG/M |
3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032401 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0 | Environmental | Open in IMG/M |
3300033407 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175 | Environmental | Open in IMG/M |
3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
3300033485 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A | Environmental | Open in IMG/M |
3300033501 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction | Environmental | Open in IMG/M |
3300033521 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B | Environmental | Open in IMG/M |
3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
3300034143 | Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNS | Environmental | Open in IMG/M |
3300034144 | Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 58SNS | Environmental | Open in IMG/M |
3300034172 | Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
deepsgr_00476140 | 2199352025 | Soil | VIVSGNIIGKTFTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
C688J13580_10461581 | 3300001205 | Soil | GNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLVTGAVVKRREVTE* |
Ga0062589_1006335811 | 3300004156 | Soil | VVIVSGNIIGKTLTAPVLISQLASQFQLDEAAAVATVLFTISFVLVLVTERLVGARNKDAV* |
Ga0062589_1013708322 | 3300004156 | Soil | VILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATSKLVKTREVSE |
Ga0062589_1026166441 | 3300004156 | Soil | SGNLTGKTLTAPVFIFQLTSQFKYAEAAAVSALLFGLAFLLVIVTERLVSKRTAGYAE* |
Ga0062590_1011136722 | 3300004157 | Soil | VVIVSGNIIGKTLTAPVLIFQFASQFRTEEAAAVSTLLFAISFVLVLVTERLVGRKKRGLA* |
Ga0062590_1016233072 | 3300004157 | Soil | VVIVSGNIIGKTLTAPVLIYQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGRGRAAE |
Ga0063356_1040775941 | 3300004463 | Arabidopsis Thaliana Rhizosphere | APVFIFQLANQFRPVEAAAVATVLFALSFVLVLVTGRLLRRKEES* |
Ga0062595_1003482342 | 3300004479 | Soil | TLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLAKRREVSE* |
Ga0062383_106762372 | 3300004778 | Wetland Sediment | SGNLTSKTMTAPYFIFQLTNQFKPEEAAAVATMLFAISFLLVMLTSRLVRTERKEAKA* |
Ga0062594_1028646752 | 3300005093 | Soil | EIGSVILVSGNRTGHTLTAPVFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKEADG* |
Ga0066685_106979951 | 3300005180 | Soil | EFGAIVIVSGNKTGTLTAPVFIFQLASQFKTAQAAAVASVFFALSFVMVLLTARLLRRKEEL* |
Ga0066675_114410612 | 3300005187 | Soil | PVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA* |
Ga0068869_1013848461 | 3300005334 | Miscanthus Rhizosphere | SGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV* |
Ga0070694_1012616031 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | GNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV* |
Ga0070708_1000200088 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | TGKTLTAPVFIFQLTSQFRYAEAAAVSTLLFVISASLVLVTERLVSTRREAP* |
Ga0066682_104629042 | 3300005450 | Soil | VFIFQLTSQFKPAQAAAVATLLFGLSFVLVLVTSRLIARNEASA* |
Ga0070662_1016898051 | 3300005457 | Corn Rhizosphere | TAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV* |
Ga0070698_1009760902 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | VLVSGNRPGETLTAPVFIFQLTGQFRPEEAAAVATLMFGISFVLVLITARLLRRREAA* |
Ga0070697_1020266071 | 3300005536 | Corn, Switchgrass And Miscanthus Rhizosphere | SGNIIGKTLTAPYLIFQFASQNRPEEAAAVATVLFAISFVLVLVTERLVGLRRKESA* |
Ga0066701_104111042 | 3300005552 | Soil | GNIPKKTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTTRLIARNEAPA* |
Ga0066704_101905863 | 3300005557 | Soil | GNIPKKTLTAPVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA* |
Ga0066700_107699062 | 3300005559 | Soil | TLTAPVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA* |
Ga0066705_103713492 | 3300005569 | Soil | GRTLTAPVFIFQLTSQFHYAQAAAISSLLFALSFVLVLVTERLVSRRAEGSWA* |
Ga0070702_1010173652 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | IVIVSGNIIGKTLTAPVLIFQFASQFRTDEAAAVATLLFGLSFVLVLVTERLLGVRRKRGVP* |
Ga0070702_1013762882 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | IIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV* |
Ga0066903_1025369692 | 3300005764 | Tropical Forest Soil | GHTLTAPVFIFSLTSQSRFAEAAAVATFLFAISFVLVLATSKLVKQREVSE* |
Ga0081539_102144892 | 3300005985 | Tabebuia Heterophylla Rhizosphere | GNRSGETLTAPVFIFQLTNQFRPAEAASIATLMFAISFVLVLVTSRLIARKAEA* |
Ga0066651_107635512 | 3300006031 | Soil | AGNIPKKTLTAPVFIFQLTSQFKPAQAAAVATLLFGLSFVLVLVTSRLIARNEASA* |
Ga0066656_103767902 | 3300006034 | Soil | LVSGNKTGHTLTAPVFIFQLTSQFRPAEAAAVATVLFAISFVLVLVTSRLLRRNEAVE* |
Ga0075422_100103501 | 3300006196 | Populus Rhizosphere | GNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGGRRTGE* |
Ga0066659_107307481 | 3300006797 | Soil | HRTLTAPVYIFQLVSQFKYAEAAAVSALLFALAFVLVLITERLVSRGSRGFRAS* |
Ga0075430_1007460842 | 3300006846 | Populus Rhizosphere | SGNLSGKTLTAPVFIFQLANQFRPAEAAAIATLMFAISFVLVLLTSRFLGRAAQA* |
Ga0075434_1001650404 | 3300006871 | Populus Rhizosphere | LTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV* |
Ga0075434_1025270382 | 3300006871 | Populus Rhizosphere | TLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGGGKGAE* |
Ga0075429_1005190772 | 3300006880 | Populus Rhizosphere | TAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGGGRRSAE* |
Ga0074063_138999842 | 3300006953 | Soil | VSGNRTGKTLTAPVFIFQLTSQFRASEAAAVATLLFAISFVLVMVTTRILRRQEGRI* |
Ga0079218_140142541 | 3300007004 | Agricultural Soil | AIVIISGNITGRTLTAPVFVFQLASQFRPEDAAAVAGVLFLISFAIVLTVDRLVNKKVAR |
Ga0066710_1019033512 | 3300009012 | Grasslands Soil | VSGNITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFSVSFVLVLITERLVHRRRDVP |
Ga0066710_1031454442 | 3300009012 | Grasslands Soil | SGNKTGTLTAPVFIFQLTSQFRPAEAAAVASILFAMSFVLVLVTARLLRRKEEA |
Ga0105098_104280891 | 3300009081 | Freshwater Sediment | NIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGSRGKDAV* |
Ga0105107_105803521 | 3300009087 | Freshwater Sediment | LTNTKTAPILIFQLTSQFKPEEAAAVATLLFAISFVLVLVTTRLVRTERKEAEA* |
Ga0099827_119995511 | 3300009090 | Vadose Zone Soil | NIPKKTLTAPVFIFQLTSQFKPAEAAAVATLLFAFSFVLVLVTSRLIARKEAPV* |
Ga0105245_106469833 | 3300009098 | Miscanthus Rhizosphere | LTAPVFIFQLTGQFRFAEAAAVATLLFAISFVMVLATGRLLRRKESDG* |
Ga0066709_1018054442 | 3300009137 | Grasslands Soil | LTAPVFIFQLVSQFRYPEAAAVSTVLFALSFLLVLVTERLVRQRTDGFWA* |
Ga0111538_108652491 | 3300009156 | Populus Rhizosphere | PVFIFQLTNQFRPAEAAAVATLMFAISFVVVLLTARLLTRKEEA* |
Ga0105242_122654621 | 3300009176 | Miscanthus Rhizosphere | SGNIIGKTLTAPVLIFQFASQFRTDEAAAVATLLFGLSFVLVLVTERLLGVRRKRGVP* |
Ga0105248_114994232 | 3300009177 | Switchgrass Rhizosphere | LTAPVFIFQLANQFRPVEAAAVATVLFALSFVLVLVTGRLLRRKEES* |
Ga0126307_100197141 | 3300009789 | Serpentine Soil | PVLIFQLASQFKPEEAAAIATVLFGISFVLVLVTERLVRGKAPA* |
Ga0105063_10398361 | 3300009804 | Groundwater Sand | VSGNIIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS* |
Ga0105084_11020722 | 3300009811 | Groundwater Sand | VVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAL* |
Ga0126310_101440323 | 3300010044 | Serpentine Soil | IVSGNIIGKTLTAPVLIFQFASQFRTEEAAAVSALLFAISFVLVLITERLVGVRKKRAVP |
Ga0126310_117332791 | 3300010044 | Serpentine Soil | SGNITGRTLTAPVLISQLAGQFKPEQAAAVATVLFLISFVVVLVTTRLMRTRKEESE* |
Ga0134128_121293601 | 3300010373 | Terrestrial Soil | LTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGRLVKQREVSE* |
Ga0134122_119216852 | 3300010400 | Terrestrial Soil | APVFIFSLTSQFRFAEAAAVATLLFAISFVLVLVTGSLLKRREVDE* |
Ga0137374_102020681 | 3300012204 | Vadose Zone Soil | VVIVSGNIIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS* |
Ga0137376_103045161 | 3300012208 | Vadose Zone Soil | IPRKTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST* |
Ga0137376_109543262 | 3300012208 | Vadose Zone Soil | FIFQLTSQFKPAQAAAVATLLFAISFVLVLVTSRLIARNEVSA* |
Ga0137372_102780233 | 3300012350 | Vadose Zone Soil | SGNITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFAISFVLVLVTERLVSRRQGAL* |
Ga0137372_106636031 | 3300012350 | Vadose Zone Soil | ITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFSVSFVLVLITERLVHRRRDVP* |
Ga0137375_110459281 | 3300012360 | Vadose Zone Soil | IIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS* |
Ga0157285_102735442 | 3300012897 | Soil | LTAPVFIFQLASQFRPEEAAAVATLLFAIAFVLVLITSRLTRPREAASE* |
Ga0157293_103224882 | 3300012898 | Soil | TAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG* |
Ga0157291_103919081 | 3300012902 | Soil | ILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREASE* |
Ga0157298_101173371 | 3300012913 | Soil | LTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG* |
Ga0164300_105981392 | 3300012951 | Soil | LVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLLTGSLLKRREGDA* |
Ga0164307_117543892 | 3300012987 | Soil | VILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREASE |
Ga0075326_10692181 | 3300014271 | Natural And Restored Wetlands | PVFIFQLTTQFRPLEAAAVATLLFSISFVLVLVTARLLKRKEDDA* |
Ga0157380_110891362 | 3300014326 | Switchgrass Rhizosphere | GAVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGSRNKDAV* |
Ga0190266_101713232 | 3300017965 | Soil | VLVSGNRPGETLTAPVFIFQLTGQFRPDEAAAVATLMFGISFVLVLITARLLKRREAA |
Ga0184610_11719741 | 3300017997 | Groundwater Sediment | VIVSGNIIGKTLTARVLIFQLASQFQPNQAAAVATLLFAISFILVLVTERLVGARNKDAV |
Ga0184620_103189822 | 3300018051 | Groundwater Sediment | GNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV |
Ga0184638_10283281 | 3300018052 | Groundwater Sediment | AVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0184638_10678183 | 3300018052 | Groundwater Sediment | AVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGTRNKDAV |
Ga0184619_104740962 | 3300018061 | Groundwater Sediment | VIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0184640_102125951 | 3300018074 | Groundwater Sediment | NIIGKTLTAPVLITQLINGGKPEEAAAVATLLFGLSFVLVLVTERLLSTGRKETS |
Ga0184632_103124251 | 3300018075 | Groundwater Sediment | NRPGETLTAPVFIFQLTGQFRPEEAAAVATLMFGISFVLVLITARLLRRREAA |
Ga0066667_108488772 | 3300018433 | Grasslands Soil | GRTLTAPVFIFQLTSQFRTEEAAAVSTLLFAISFVLVLVTERLIDTGRRG |
Ga0066667_110222671 | 3300018433 | Grasslands Soil | KTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST |
Ga0190268_100537401 | 3300018466 | Soil | VLVAGNRAGETLTAPVFIFQLANQFRPAEAASIATLMFAISFVLVLVTARLLARGAEA |
Ga0190268_100637973 | 3300018466 | Soil | VVLVAGNRAGETLTAPVFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA |
Ga0190270_105029313 | 3300018469 | Soil | FQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA |
Ga0190271_138701631 | 3300018481 | Soil | NKTLTAPVFIFQLTGQFKPEEAAAVSTVLFAISFTLVMVTYKLVSRTGEAI |
Ga0190264_116039071 | 3300019377 | Soil | APVFIFQLTGQFRPEEAAAVATLMFGISFVLVLVTARLLRRREAA |
Ga0222622_105363241 | 3300022756 | Groundwater Sediment | LTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0210115_10210873 | 3300025791 | Natural And Restored Wetlands | PVFIFQLAAQFKPEEAAAVAAMLFSVSFILVLVTARLNKRKEATS |
Ga0207707_113842572 | 3300025912 | Corn Rhizosphere | VILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREESG |
Ga0207690_110521382 | 3300025932 | Corn Rhizosphere | GSVILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGRLVKQREVSE |
Ga0207669_101128163 | 3300025937 | Miscanthus Rhizosphere | VSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREESG |
Ga0207712_104163263 | 3300025961 | Switchgrass Rhizosphere | SGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0207675_1007057592 | 3300026118 | Switchgrass Rhizosphere | IGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0209577_102699473 | 3300026552 | Soil | GRTLTAPVYIFSLVSQFRYPEAAAVSATLFAMSFVLVLVTERLVAPKKDA |
Ga0209077_11432842 | 3300027675 | Freshwater Sediment | NIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV |
Ga0209382_122943461 | 3300027909 | Populus Rhizosphere | GNLSGKTLTAPVFIFQLANQFRPAEAAAIATLMFAISFVLVLLTSRFLGRAAQA |
Ga0247828_105157571 | 3300028587 | Soil | NETLTAPVFIFQLANQFRPVEAAAVATLLFTLSFVLVLVTGRLLRRKEED |
Ga0307293_101493312 | 3300028711 | Soil | VLVSGNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV |
Ga0307323_101643532 | 3300028787 | Soil | VVIVSGNIIGKTLTAPYLIFQFASQAKPEEAAAVATLLFAISFVLVLVTERLVGLRRKES |
Ga0307287_102587491 | 3300028796 | Soil | SGNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV |
Ga0307284_100450303 | 3300028799 | Soil | KTLTAPYLIFQFASQAKPEEAAAVATLLFAISFVLVLVTERLVGLRRKESA |
Ga0307503_103576891 | 3300028802 | Soil | VILVSGNRTGHTLTAPVFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKEADG |
Ga0307296_100915321 | 3300028819 | Soil | FQLASQFKTAQAAAVASVFFALSFVMVLLTARLLRRKEEV |
Ga0307312_110389941 | 3300028828 | Soil | KKTLAAPVYIFQLTQQFRPQEAGAVATLLFAISFALVLITTRLLRREREA |
Ga0307499_101434851 | 3300031184 | Soil | VFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKETDG |
Ga0307497_106854702 | 3300031226 | Soil | GAIVIVSGNLTGKTLTAPVFIFQLVSQFNYPEAAAVSALLFGTAFVLVMITERLVSKRTAGYAG |
Ga0307506_101191182 | 3300031366 | Soil | SVILVSGNRSGETLTAPVFIFQLTSQFRPAEAAAVATLLFAISFVLVLATGRMVRRKEAP |
Ga0310892_102533421 | 3300031858 | Soil | AGKTLTAPVFIFQLTNQFRPAEAAAVATLMFAISFVVVLLTARLLSRKEEA |
Ga0307409_1019982261 | 3300031995 | Rhizosphere | APVFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA |
Ga0310906_111063152 | 3300032013 | Soil | LSGNITGKTLTAPVFIFQLASQFRPEEAAAVATLLFAIAFLLVLITSRLTRPREAASE |
Ga0307415_1016642021 | 3300032126 | Rhizosphere | TLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGARNKDAV |
Ga0307472_1018850351 | 3300032205 | Hardwood Forest Soil | NRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG |
Ga0315275_106980783 | 3300032401 | Sediment | GNITGRTLTAPVFIFQLAMSFKPQEAAAVATLLFALSFALVLVTTRLTRLPTEVL |
Ga0214472_104637571 | 3300033407 | Soil | VIVSGNIIGKTLTAPVLITQLINGGRPEEAAAVATLLFGLSFALVLVTERLLPTGRKEAA |
Ga0316620_123450362 | 3300033480 | Soil | PVFIFQLTSQFRPAEAAAVATGLFTMSFVLVLSTNRLLRRKESSA |
Ga0316626_106842392 | 3300033485 | Soil | GNIEGRTKTAPYLIFQLTNQFKPEEAAAVATLLFAISFVLVLVTSRLVRIERKEAKA |
Ga0326732_10629432 | 3300033501 | Peat Soil | TLTAPVFIFQLSSRFRTAEAAAVATLLFTISFVLVLVTSRILRRTEGDA |
Ga0316616_1006411301 | 3300033521 | Soil | PVFIFQLTTQFKPDQAAAVATLLFAISFALVLFTSRLVRTERKEAKA |
Ga0316616_1027354322 | 3300033521 | Soil | VSGNLTNTKTAPILIFQLTSQFKPEEAAAVATMLFAFSFVLVLVTSRLVRTERKEAEA |
Ga0247830_105659912 | 3300033551 | Soil | VFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA |
Ga0334961_012863_1220_1390 | 3300034143 | Sub-Biocrust Soil | SANLTGKTLTAPVFIFQLASQFRPEEAAAVSTLLFGTSFFLVLITYRVLLRRGEAE |
Ga0334962_029066_552_713 | 3300034144 | Sub-Biocrust Soil | ITNRTLTAPVFIFQLASQFRSEEAAAVSAVLFAMSFTLVMITYRLAGNRGDHP |
Ga0334913_111206_2_178 | 3300034172 | Sub-Biocrust Soil | LSGNITGRTLTAPVLVAQLAGQFQPEQAAAVATVLFAISFVVVLITTRVLRTRKEEAD |
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