NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F072505

Metagenome / Metatranscriptome Family F072505

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F072505
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 54 residues
Representative Sequence KTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST
Number of Associated Samples 108
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.182 % of family members)
Environment Ontology (ENVO) Unclassified
(23.967 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(38.843 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.85%    β-sheet: 0.00%    Coil/Unstructured: 46.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00528BPD_transp_1 39.67
PF00005ABC_tran 9.92
PF08402TOBE_2 0.83
PF04095NAPRTase 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 0.83


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.18%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.09%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.31%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.48%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.48%
Sub-Biocrust SoilEnvironmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.65%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.65%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.83%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.83%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.83%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.83%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.83%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.83%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.83%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300001205Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027675Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033501Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fractionEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034143Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 57SNSEnvironmentalOpen in IMG/M
3300034144Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 58SNSEnvironmentalOpen in IMG/M
3300034172Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMSEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_004761402199352025SoilVIVSGNIIGKTFTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
C688J13580_104615813300001205SoilGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLVTGAVVKRREVTE*
Ga0062589_10063358113300004156SoilVVIVSGNIIGKTLTAPVLISQLASQFQLDEAAAVATVLFTISFVLVLVTERLVGARNKDAV*
Ga0062589_10137083223300004156SoilVILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATSKLVKTREVSE
Ga0062589_10261664413300004156SoilSGNLTGKTLTAPVFIFQLTSQFKYAEAAAVSALLFGLAFLLVIVTERLVSKRTAGYAE*
Ga0062590_10111367223300004157SoilVVIVSGNIIGKTLTAPVLIFQFASQFRTEEAAAVSTLLFAISFVLVLVTERLVGRKKRGLA*
Ga0062590_10162330723300004157SoilVVIVSGNIIGKTLTAPVLIYQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGRGRAAE
Ga0063356_10407759413300004463Arabidopsis Thaliana RhizosphereAPVFIFQLANQFRPVEAAAVATVLFALSFVLVLVTGRLLRRKEES*
Ga0062595_10034823423300004479SoilTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLAKRREVSE*
Ga0062383_1067623723300004778Wetland SedimentSGNLTSKTMTAPYFIFQLTNQFKPEEAAAVATMLFAISFLLVMLTSRLVRTERKEAKA*
Ga0062594_10286467523300005093SoilEIGSVILVSGNRTGHTLTAPVFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKEADG*
Ga0066685_1069799513300005180SoilEFGAIVIVSGNKTGTLTAPVFIFQLASQFKTAQAAAVASVFFALSFVMVLLTARLLRRKEEL*
Ga0066675_1144106123300005187SoilPVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA*
Ga0068869_10138484613300005334Miscanthus RhizosphereSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV*
Ga0070694_10126160313300005444Corn, Switchgrass And Miscanthus RhizosphereGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV*
Ga0070708_10002000883300005445Corn, Switchgrass And Miscanthus RhizosphereTGKTLTAPVFIFQLTSQFRYAEAAAVSTLLFVISASLVLVTERLVSTRREAP*
Ga0066682_1046290423300005450SoilVFIFQLTSQFKPAQAAAVATLLFGLSFVLVLVTSRLIARNEASA*
Ga0070662_10168980513300005457Corn RhizosphereTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV*
Ga0070698_10097609023300005471Corn, Switchgrass And Miscanthus RhizosphereVLVSGNRPGETLTAPVFIFQLTGQFRPEEAAAVATLMFGISFVLVLITARLLRRREAA*
Ga0070697_10202660713300005536Corn, Switchgrass And Miscanthus RhizosphereSGNIIGKTLTAPYLIFQFASQNRPEEAAAVATVLFAISFVLVLVTERLVGLRRKESA*
Ga0066701_1041110423300005552SoilGNIPKKTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTTRLIARNEAPA*
Ga0066704_1019058633300005557SoilGNIPKKTLTAPVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA*
Ga0066700_1076990623300005559SoilTLTAPVFIFQLTSQFKPSQAAAVATLLFAISFVLVLVTSRLIARDEASA*
Ga0066705_1037134923300005569SoilGRTLTAPVFIFQLTSQFHYAQAAAISSLLFALSFVLVLVTERLVSRRAEGSWA*
Ga0070702_10101736523300005615Corn, Switchgrass And Miscanthus RhizosphereIVIVSGNIIGKTLTAPVLIFQFASQFRTDEAAAVATLLFGLSFVLVLVTERLLGVRRKRGVP*
Ga0070702_10137628823300005615Corn, Switchgrass And Miscanthus RhizosphereIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV*
Ga0066903_10253696923300005764Tropical Forest SoilGHTLTAPVFIFSLTSQSRFAEAAAVATFLFAISFVLVLATSKLVKQREVSE*
Ga0081539_1021448923300005985Tabebuia Heterophylla RhizosphereGNRSGETLTAPVFIFQLTNQFRPAEAASIATLMFAISFVLVLVTSRLIARKAEA*
Ga0066651_1076355123300006031SoilAGNIPKKTLTAPVFIFQLTSQFKPAQAAAVATLLFGLSFVLVLVTSRLIARNEASA*
Ga0066656_1037679023300006034SoilLVSGNKTGHTLTAPVFIFQLTSQFRPAEAAAVATVLFAISFVLVLVTSRLLRRNEAVE*
Ga0075422_1001035013300006196Populus RhizosphereGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGGRRTGE*
Ga0066659_1073074813300006797SoilHRTLTAPVYIFQLVSQFKYAEAAAVSALLFALAFVLVLITERLVSRGSRGFRAS*
Ga0075430_10074608423300006846Populus RhizosphereSGNLSGKTLTAPVFIFQLANQFRPAEAAAIATLMFAISFVLVLLTSRFLGRAAQA*
Ga0075434_10016504043300006871Populus RhizosphereLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARKQDAV*
Ga0075434_10252703823300006871Populus RhizosphereTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGGGKGAE*
Ga0075429_10051907723300006880Populus RhizosphereTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGGGRRSAE*
Ga0074063_1389998423300006953SoilVSGNRTGKTLTAPVFIFQLTSQFRASEAAAVATLLFAISFVLVMVTTRILRRQEGRI*
Ga0079218_1401425413300007004Agricultural SoilAIVIISGNITGRTLTAPVFVFQLASQFRPEDAAAVAGVLFLISFAIVLTVDRLVNKKVAR
Ga0066710_10190335123300009012Grasslands SoilVSGNITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFSVSFVLVLITERLVHRRRDVP
Ga0066710_10314544423300009012Grasslands SoilSGNKTGTLTAPVFIFQLTSQFRPAEAAAVASILFAMSFVLVLVTARLLRRKEEA
Ga0105098_1042808913300009081Freshwater SedimentNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGSRGKDAV*
Ga0105107_1058035213300009087Freshwater SedimentLTNTKTAPILIFQLTSQFKPEEAAAVATLLFAISFVLVLVTTRLVRTERKEAEA*
Ga0099827_1199955113300009090Vadose Zone SoilNIPKKTLTAPVFIFQLTSQFKPAEAAAVATLLFAFSFVLVLVTSRLIARKEAPV*
Ga0105245_1064698333300009098Miscanthus RhizosphereLTAPVFIFQLTGQFRFAEAAAVATLLFAISFVMVLATGRLLRRKESDG*
Ga0066709_10180544423300009137Grasslands SoilLTAPVFIFQLVSQFRYPEAAAVSTVLFALSFLLVLVTERLVRQRTDGFWA*
Ga0111538_1086524913300009156Populus RhizospherePVFIFQLTNQFRPAEAAAVATLMFAISFVVVLLTARLLTRKEEA*
Ga0105242_1226546213300009176Miscanthus RhizosphereSGNIIGKTLTAPVLIFQFASQFRTDEAAAVATLLFGLSFVLVLVTERLLGVRRKRGVP*
Ga0105248_1149942323300009177Switchgrass RhizosphereLTAPVFIFQLANQFRPVEAAAVATVLFALSFVLVLVTGRLLRRKEES*
Ga0126307_1001971413300009789Serpentine SoilPVLIFQLASQFKPEEAAAIATVLFGISFVLVLVTERLVRGKAPA*
Ga0105063_103983613300009804Groundwater SandVSGNIIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS*
Ga0105084_110207223300009811Groundwater SandVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAL*
Ga0126310_1014403233300010044Serpentine SoilIVSGNIIGKTLTAPVLIFQFASQFRTEEAAAVSALLFAISFVLVLITERLVGVRKKRAVP
Ga0126310_1173327913300010044Serpentine SoilSGNITGRTLTAPVLISQLAGQFKPEQAAAVATVLFLISFVVVLVTTRLMRTRKEESE*
Ga0134128_1212936013300010373Terrestrial SoilLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGRLVKQREVSE*
Ga0134122_1192168523300010400Terrestrial SoilAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLVTGSLLKRREVDE*
Ga0137374_1020206813300012204Vadose Zone SoilVVIVSGNIIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS*
Ga0137376_1030451613300012208Vadose Zone SoilIPRKTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST*
Ga0137376_1095432623300012208Vadose Zone SoilFIFQLTSQFKPAQAAAVATLLFAISFVLVLVTSRLIARNEVSA*
Ga0137372_1027802333300012350Vadose Zone SoilSGNITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFAISFVLVLVTERLVSRRQGAL*
Ga0137372_1066360313300012350Vadose Zone SoilITGKTLTAPVFIFQLTSQFRPEQAAAVATLLFSVSFVLVLITERLVHRRRDVP*
Ga0137375_1104592813300012360Vadose Zone SoilIIGKTLTAPVLITQLINGGKPEDAAAVATLLFGLSFVLVLVTERLLPTGRKEAS*
Ga0157285_1027354423300012897SoilLTAPVFIFQLASQFRPEEAAAVATLLFAIAFVLVLITSRLTRPREAASE*
Ga0157293_1032248823300012898SoilTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG*
Ga0157291_1039190813300012902SoilILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREASE*
Ga0157298_1011733713300012913SoilLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG*
Ga0164300_1059813923300012951SoilLVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLLTGSLLKRREGDA*
Ga0164307_1175438923300012987SoilVILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREASE
Ga0075326_106921813300014271Natural And Restored WetlandsPVFIFQLTTQFRPLEAAAVATLLFSISFVLVLVTARLLKRKEDDA*
Ga0157380_1108913623300014326Switchgrass RhizosphereGAVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGSRNKDAV*
Ga0190266_1017132323300017965SoilVLVSGNRPGETLTAPVFIFQLTGQFRPDEAAAVATLMFGISFVLVLITARLLKRREAA
Ga0184610_117197413300017997Groundwater SedimentVIVSGNIIGKTLTARVLIFQLASQFQPNQAAAVATLLFAISFILVLVTERLVGARNKDAV
Ga0184620_1031898223300018051Groundwater SedimentGNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV
Ga0184638_102832813300018052Groundwater SedimentAVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0184638_106781833300018052Groundwater SedimentAVVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGTRNKDAV
Ga0184619_1047409623300018061Groundwater SedimentVIVSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0184640_1021259513300018074Groundwater SedimentNIIGKTLTAPVLITQLINGGKPEEAAAVATLLFGLSFVLVLVTERLLSTGRKETS
Ga0184632_1031242513300018075Groundwater SedimentNRPGETLTAPVFIFQLTGQFRPEEAAAVATLMFGISFVLVLITARLLRRREAA
Ga0066667_1084887723300018433Grasslands SoilGRTLTAPVFIFQLTSQFRTEEAAAVSTLLFAISFVLVLVTERLIDTGRRG
Ga0066667_1102226713300018433Grasslands SoilKTLTAPVFIFQLTSQFKPAEAAAVATLLFAISFVLVLVTSRLIARNEAST
Ga0190268_1005374013300018466SoilVLVAGNRAGETLTAPVFIFQLANQFRPAEAASIATLMFAISFVLVLVTARLLARGAEA
Ga0190268_1006379733300018466SoilVVLVAGNRAGETLTAPVFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA
Ga0190270_1050293133300018469SoilFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA
Ga0190271_1387016313300018481SoilNKTLTAPVFIFQLTGQFKPEEAAAVSTVLFAISFTLVMVTYKLVSRTGEAI
Ga0190264_1160390713300019377SoilAPVFIFQLTGQFRPEEAAAVATLMFGISFVLVLVTARLLRRREAA
Ga0222622_1053632413300022756Groundwater SedimentLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0210115_102108733300025791Natural And Restored WetlandsPVFIFQLAAQFKPEEAAAVAAMLFSVSFILVLVTARLNKRKEATS
Ga0207707_1138425723300025912Corn RhizosphereVILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREESG
Ga0207690_1105213823300025932Corn RhizosphereGSVILVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGRLVKQREVSE
Ga0207669_1011281633300025937Miscanthus RhizosphereVSGNRTGHTLTAPVFIFSLTSQFRFAEAAAVATFLFAISFVLVLATGKLVKQREESG
Ga0207712_1041632633300025961Switchgrass RhizosphereSGNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0207675_10070575923300026118Switchgrass RhizosphereIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0209577_1026994733300026552SoilGRTLTAPVYIFSLVSQFRYPEAAAVSATLFAMSFVLVLVTERLVAPKKDA
Ga0209077_114328423300027675Freshwater SedimentNIIGKTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLVGARNKDAV
Ga0209382_1229434613300027909Populus RhizosphereGNLSGKTLTAPVFIFQLANQFRPAEAAAIATLMFAISFVLVLLTSRFLGRAAQA
Ga0247828_1051575713300028587SoilNETLTAPVFIFQLANQFRPVEAAAVATLLFTLSFVLVLVTGRLLRRKEED
Ga0307293_1014933123300028711SoilVLVSGNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV
Ga0307323_1016435323300028787SoilVVIVSGNIIGKTLTAPYLIFQFASQAKPEEAAAVATLLFAISFVLVLVTERLVGLRRKES
Ga0307287_1025874913300028796SoilSGNIAGKTLTAPVFIYQLANQFRPAEAAAIATLMFTISFVLVLVTARVTRRVEV
Ga0307284_1004503033300028799SoilKTLTAPYLIFQFASQAKPEEAAAVATLLFAISFVLVLVTERLVGLRRKESA
Ga0307503_1035768913300028802SoilVILVSGNRTGHTLTAPVFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKEADG
Ga0307296_1009153213300028819SoilFQLASQFKTAQAAAVASVFFALSFVMVLLTARLLRRKEEV
Ga0307312_1103899413300028828SoilKKTLAAPVYIFQLTQQFRPQEAGAVATLLFAISFALVLITTRLLRREREA
Ga0307499_1014348513300031184SoilVFIFQLTGQFRFAEAAAVATLLFAISFVLVLATGRLLRRKETDG
Ga0307497_1068547023300031226SoilGAIVIVSGNLTGKTLTAPVFIFQLVSQFNYPEAAAVSALLFGTAFVLVMITERLVSKRTAGYAG
Ga0307506_1011911823300031366SoilSVILVSGNRSGETLTAPVFIFQLTSQFRPAEAAAVATLLFAISFVLVLATGRMVRRKEAP
Ga0310892_1025334213300031858SoilAGKTLTAPVFIFQLTNQFRPAEAAAVATLMFAISFVVVLLTARLLSRKEEA
Ga0307409_10199822613300031995RhizosphereAPVFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA
Ga0310906_1110631523300032013SoilLSGNITGKTLTAPVFIFQLASQFRPEEAAAVATLLFAIAFLLVLITSRLTRPREAASE
Ga0307415_10166420213300032126RhizosphereTLTAPVLIFQLASQFQPNQAAAVATLLFAISFVLVLVTERLIGARNKDAV
Ga0307472_10188503513300032205Hardwood Forest SoilNRTGHTLTAPVFIFSLTSQFRFAEAAAVATLLFAISFVLVLATGKLVKQREESG
Ga0315275_1069807833300032401SedimentGNITGRTLTAPVFIFQLAMSFKPQEAAAVATLLFALSFALVLVTTRLTRLPTEVL
Ga0214472_1046375713300033407SoilVIVSGNIIGKTLTAPVLITQLINGGRPEEAAAVATLLFGLSFALVLVTERLLPTGRKEAA
Ga0316620_1234503623300033480SoilPVFIFQLTSQFRPAEAAAVATGLFTMSFVLVLSTNRLLRRKESSA
Ga0316626_1068423923300033485SoilGNIEGRTKTAPYLIFQLTNQFKPEEAAAVATLLFAISFVLVLVTSRLVRIERKEAKA
Ga0326732_106294323300033501Peat SoilTLTAPVFIFQLSSRFRTAEAAAVATLLFTISFVLVLVTSRILRRTEGDA
Ga0316616_10064113013300033521SoilPVFIFQLTTQFKPDQAAAVATLLFAISFALVLFTSRLVRTERKEAKA
Ga0316616_10273543223300033521SoilVSGNLTNTKTAPILIFQLTSQFKPEEAAAVATMLFAFSFVLVLVTSRLVRTERKEAEA
Ga0247830_1056599123300033551SoilVFIFQLANQFRPIEAAAVATLLFSISFVLVLVTARLLKRKEDDA
Ga0334961_012863_1220_13903300034143Sub-Biocrust SoilSANLTGKTLTAPVFIFQLASQFRPEEAAAVSTLLFGTSFFLVLITYRVLLRRGEAE
Ga0334962_029066_552_7133300034144Sub-Biocrust SoilITNRTLTAPVFIFQLASQFRSEEAAAVSAVLFAMSFTLVMITYRLAGNRGDHP
Ga0334913_111206_2_1783300034172Sub-Biocrust SoilLSGNITGRTLTAPVLVAQLAGQFQPEQAAAVATVLFAISFVVVLITTRVLRTRKEEAD


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