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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F072504 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 121 |
| Average Sequence Length | 51 residues |
| Representative Sequence | MFATQQNRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA |
| Number of Associated Samples | 87 |
| Number of Associated Scaffolds | 121 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 78.51 % |
| % of genes near scaffold ends (potentially truncated) | 33.88 % |
| % of genes from short scaffolds (< 2000 bps) | 80.99 % |
| Associated GOLD sequencing projects | 76 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.42 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (58.678 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (19.008 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.364 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (52.066 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 62.03% β-sheet: 0.00% Coil/Unstructured: 37.97% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.42 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 121 Family Scaffolds |
|---|---|---|
| PF00455 | DeoRC | 15.70 |
| PF08220 | HTH_DeoR | 14.05 |
| PF00072 | Response_reg | 10.74 |
| PF00491 | Arginase | 3.31 |
| PF00293 | NUDIX | 2.48 |
| PF03544 | TonB_C | 1.65 |
| PF04366 | Ysc84 | 0.83 |
| PF00171 | Aldedh | 0.83 |
| PF08002 | DUF1697 | 0.83 |
| PF06772 | LtrA | 0.83 |
| PF01026 | TatD_DNase | 0.83 |
| PF08245 | Mur_ligase_M | 0.83 |
| COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
|---|---|---|---|
| COG1349 | DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family | Transcription [K] | 31.40 |
| COG0120 | Ribose 5-phosphate isomerase | Carbohydrate transport and metabolism [G] | 15.70 |
| COG0010 | Arginase/agmatinase family enzyme | Amino acid transport and metabolism [E] | 3.31 |
| COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 1.65 |
| COG0014 | Gamma-glutamyl phosphate reductase | Amino acid transport and metabolism [E] | 0.83 |
| COG1012 | Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase | Lipid transport and metabolism [I] | 0.83 |
| COG2930 | Lipid-binding SYLF domain, Ysc84/FYVE family | Lipid transport and metabolism [I] | 0.83 |
| COG3797 | Uncharacterized conserved protein, DUF1697 family | Function unknown [S] | 0.83 |
| COG4230 | Delta 1-pyrroline-5-carboxylate dehydrogenase | Amino acid transport and metabolism [E] | 0.83 |
| COG4292 | Low temperature requirement protein LtrA (function unknown) | Function unknown [S] | 0.83 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 58.68 % |
| All Organisms | root | All Organisms | 41.32 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 19.01% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 10.74% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 9.92% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 9.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 9.09% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 4.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.31% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 2.48% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 2.48% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.48% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 1.65% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.65% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.65% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.65% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.65% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.65% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.65% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.65% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.83% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.83% |
| Microbial Mat On Rocks | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.83% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.83% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.83% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.83% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.83% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.83% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
| 2228664021 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
| 3300003319 | Sugarcane bulk soil Sample L2 | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Environmental | Open in IMG/M |
| 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
| 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
| 3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
| 3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006876 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 | Environmental | Open in IMG/M |
| 3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
| 3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
| 3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012507 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 | Host-Associated | Open in IMG/M |
| 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300018422 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T | Environmental | Open in IMG/M |
| 3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
| 3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300019360 | White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG | Environmental | Open in IMG/M |
| 3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
| 3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
| 3300022880 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6 | Environmental | Open in IMG/M |
| 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| 3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Host-Associated | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031854 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Host-Associated | Open in IMG/M |
| 3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
| 3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
| 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
| 3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
| 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
| 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Host-Associated | Open in IMG/M |
| 3300032421 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3 | Environmental | Open in IMG/M |
| 3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| GPICI_03235360 | 2088090015 | Soil | MFAITTTKLDRSPAERAVCMVLAAFIVTIGLATGAFGMHVAERNAVATWVKQA |
| GPICI_03004290 | 2088090015 | Soil | MFATTTTKLNRSLVERAVCMALAAFIVSVGLATGAFGMHIAERNAVATWVKQA |
| GPICI_00334010 | 2088090015 | Soil | MFATTTKMNRSPVERAVCMVLAAFIVSVGLATGALGMHVAEHNAVAAFVKQA |
| GPICI_01456340 | 2088090015 | Soil | MFATQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA |
| MBSR1b_0481.00007220 | 2162886012 | Miscanthus Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA |
| ICCgaii200_11124891 | 2228664021 | Soil | MFATTTTKLNRSLVERAVCMALAAFIVSVGLATGAFGMXVAERNAVATWVKQA |
| ICChiseqgaiiFebDRAFT_108297291 | 3300000363 | Soil | GHSRETEEIAMFATQQNPSPAQRAVCTLLAAFIVSIGLATGALGMHVAERNAVAAVVVKHVA* |
| INPhiseqgaiiFebDRAFT_1048132602 | 3300000364 | Soil | MFATTQNRNTVQRTVCTLLAALIVSTGLATGALGMHVAERNAVSAVVKHVA* |
| INPhiseqgaiiFebDRAFT_1051848082 | 3300000364 | Soil | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGAFGMHVAERNAVATWVKQAA* |
| JGI11643J12802_101973014 | 3300000890 | Soil | MFATTTKMNRSPVERAVCMVLAAFIVSVGLATGALGMHVAEHNAVAAFVKQA* |
| JGI11643J12802_120148523 | 3300000890 | Soil | MFATQQNPSPAQRAVCTLLAAFIVSIGLATGALGMHVAERNAVAAVVVKHVA* |
| JGI10214J12806_127189592 | 3300000891 | Soil | MFATTTKLDRSPAERAVCMVLAAFIVTVGLATGALGMHVAERNAVATWVKQA* |
| soilL1_101005873 | 3300003267 | Sugarcane Root And Bulk Soil | MFAIQQNRNPVQRAVCLVLAGFIVSMGLATGAFGMHIAERNAVAAVVTHVA* |
| soilL1_101273303 | 3300003267 | Sugarcane Root And Bulk Soil | MFATTQNRNTVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSALVKHVA* |
| soilL2_100692652 | 3300003319 | Sugarcane Root And Bulk Soil | MFATTTTNLNRSPVERAVCMVLAAFIVSVGLATGALGMHVAEHNAVATFTKQA* |
| Ga0062593_1000505992 | 3300004114 | Soil | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA* |
| Ga0063356_1000979905 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MFAIQQNRSPVQRAVCLTLAGFIVSIGLATGALGMHVAERNAS |
| Ga0063356_1004565162 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MFATTTTKLDRSPAERAVCMVLAAFIVTIGLATGAFGMHVAERNAVATWVKQA* |
| Ga0062592_1002266752 | 3300004480 | Soil | MFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA* |
| Ga0065707_106817671 | 3300005295 | Switchgrass Rhizosphere | MFATTQNRTVVERTVCTLLAALIVSVGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0066388_1023605002 | 3300005332 | Tropical Forest Soil | MFATTTSKLNRSPVERAVCMALAAFIVSLGLATGALGMHVAERNAVATWVKQA* |
| Ga0066388_1069949842 | 3300005332 | Tropical Forest Soil | MFAIQQNRNTFQRAVCLVLAGFIVSIGLATGAFGMHVAER |
| Ga0070680_1015336521 | 3300005336 | Corn Rhizosphere | MFATTTKMNRSPVERAVCMVLAAFIVSVGLATGALGMHVAERNAVATWVKQA* |
| Ga0068868_1002908832 | 3300005338 | Miscanthus Rhizosphere | MFATQQNRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0070701_100543332 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | QNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA* |
| Ga0070678_1010869262 | 3300005456 | Miscanthus Rhizosphere | MFATTTTKLDRSPAERAICMVLAAFIVTVGLATGALGMHVAERNAVATWVKQA* |
| Ga0070698_1010871311 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGAFGMHVAERNAVATWVKQA* |
| Ga0070679_1002887052 | 3300005530 | Corn Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVRHVA* |
| Ga0070665_1007500862 | 3300005548 | Switchgrass Rhizosphere | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGALGMHVAERNAVATWVKQA* |
| Ga0081540_12007181 | 3300005983 | Tabebuia Heterophylla Rhizosphere | MFATTTNLNRSPVERALCMVLAALIVSVGLATGALGMHVAERNAATWVKQA* |
| Ga0075417_104080912 | 3300006049 | Populus Rhizosphere | MFATQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA* |
| Ga0075417_106416942 | 3300006049 | Populus Rhizosphere | MFAKEVNRNPVEKAVCMALAALIVSLGLATGALGMHAAERNAATWVKQA* |
| Ga0075422_100215714 | 3300006196 | Populus Rhizosphere | MFAIQRNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA* |
| Ga0075422_104461631 | 3300006196 | Populus Rhizosphere | MFATTTTKLNRSLVERAVCMALAAFIVSVGLATGAFGMHVAERNAVATWVKQA* |
| Ga0075421_1001229264 | 3300006845 | Populus Rhizosphere | QQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA* |
| Ga0075421_1004438372 | 3300006845 | Populus Rhizosphere | MFAIQQNRSPVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAVAVVAKHVA* |
| Ga0075421_1004842632 | 3300006845 | Populus Rhizosphere | MFAIQQNRSLVQRAVCLALAGFIVSMGLATGALGMHVAERNAVAAVVKHVA* |
| Ga0075421_1023840782 | 3300006845 | Populus Rhizosphere | MFAITTTKLDRSPAERAVCMVLAAFIVTIGLATGAFGMHVAERNAVATWVKQA* |
| Ga0075430_1000662854 | 3300006846 | Populus Rhizosphere | MFAIQQNRNLVQRAVCLALAGFIVSMGLATGALGMHVAERNAVAAVVKHVA* |
| Ga0075431_1003477052 | 3300006847 | Populus Rhizosphere | MFATEMNRNTVQRTVCMLLAAFIVSTGLATGALGLHIVERNAAAALVKHA* |
| Ga0075431_1005629191 | 3300006847 | Populus Rhizosphere | NEETAMFATQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA* |
| Ga0075434_1020315111 | 3300006871 | Populus Rhizosphere | MFATTTTKLNRSLVERAVCMALAAFIVSVGLATGAFGMHVAERNAVATW |
| Ga0079217_102939012 | 3300006876 | Agricultural Soil | MFAIQRNRNPVQRAVCLTLAGFIVSIGLATGALGMHIAERNAAAVIVEQIA* |
| Ga0079217_116647782 | 3300006876 | Agricultural Soil | MFAAQQNRNPVQRTVCMLLAAFIVSTGLATGAFGLHVVERNAAAAFAQQA* |
| Ga0079216_101911292 | 3300006918 | Agricultural Soil | MFAIQQNRNPVQRAVCLVLAGFIVSIGLATGALGMHVAERNAAAVIVEQIA* |
| Ga0079218_111245441 | 3300007004 | Agricultural Soil | IAMFAIQRNRNPVQRAVCLTLAGFIVSIGLATGALGMHIAERNAAAVIVEQIA* |
| Ga0079218_117990781 | 3300007004 | Agricultural Soil | MRNQEIAMFAIQQNRSPVQRAVCLTLAGFIVSIGLATGALGMHVAERNASAVIVEQIA* |
| Ga0111539_105505892 | 3300009094 | Populus Rhizosphere | MFAIQQNRNSVQRAVCLVLDGFNVSMGLATGAFGMHVAERNAVAAVVKHVA* |
| Ga0075418_101036012 | 3300009100 | Populus Rhizosphere | MFAIQQNRNSVQRAVCLLLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA* |
| Ga0075418_102532832 | 3300009100 | Populus Rhizosphere | VAANRETEETAMFAIQQNRSPVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAVAVVAKHVA* |
| Ga0114129_107988851 | 3300009147 | Populus Rhizosphere | MFAIQRNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAV |
| Ga0111538_132730031 | 3300009156 | Populus Rhizosphere | RGVTAMFATTTTKLDRSPAERAVCMVLAAFIVTIGLATGAFGMHVAERNAVATWVKQA* |
| Ga0126310_112469541 | 3300010044 | Serpentine Soil | MFAVQQNRNPVQRTVCTLLAALIVTTGLATGAFGMHVVERDAAAAVLVKHA* |
| Ga0126310_113783982 | 3300010044 | Serpentine Soil | MFAIQQNRNPVQRTVCTLLAALIVTTGLATGAFGMHVVERDAAA |
| Ga0127502_104904651 | 3300011333 | Soil | RNQEIAMFAIQQNRSPVQRAVCLTLAGFIVSIGLATGALGMHVAERNASAVIVEQIA* |
| Ga0157342_10774241 | 3300012507 | Arabidopsis Rhizosphere | TVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVDAIVKHVA* |
| Ga0157378_115987191 | 3300013297 | Miscanthus Rhizosphere | QNRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0157380_125647671 | 3300014326 | Switchgrass Rhizosphere | SVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0157377_100257761 | 3300014745 | Miscanthus Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERN |
| Ga0157376_111756582 | 3300014969 | Miscanthus Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVV |
| Ga0132258_106325783 | 3300015371 | Arabidopsis Rhizosphere | MFAIQRNRNTVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVDAIVKHVA* |
| Ga0132257_1020756091 | 3300015373 | Arabidopsis Rhizosphere | MFATQRNRNTVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0132255_1007826642 | 3300015374 | Arabidopsis Rhizosphere | MFATQRNRNTVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVDAIVKHVA* |
| Ga0132255_1013040322 | 3300015374 | Arabidopsis Rhizosphere | MFTTTQNRNAVERTVCTLLAALIVSVGLATGALGMHVAERNAVSAVVKHVA* |
| Ga0190265_103949292 | 3300018422 | Soil | MFAIQQNRNPVQRAVCLTLAGFIVSIGLATGAFGMHIAERNAAAVIVEQIA |
| Ga0190265_110692502 | 3300018422 | Soil | MFAIQQNRNPVERAVCMLLAAVIVSVGLATGALGMHVAERNAAASWITQAQA |
| Ga0190272_104442832 | 3300018429 | Soil | MFAIQQNRNPVQRAVCLTLAGFIVSIGLATGAFGMHVAERNAAAVIVEQIA |
| Ga0190272_128650431 | 3300018429 | Soil | MFATQMNQNQSPVQRTVCTLLAALIVSVGLATGAFGMHVAERNAVSATWVKQA |
| Ga0190268_112872391 | 3300018466 | Soil | MFATTTTTKLDRSPAERAVCMVLAAFIVTLGLATGALGMHVAERNAVATWVKQA |
| Ga0190274_107013482 | 3300018476 | Soil | MFAATTQMNQSPVQRTVCTLLAALIVTVGLATGAFGMHVAERDAAAAVLAKHA |
| Ga0190274_122601151 | 3300018476 | Soil | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGAFGMHVAERNAVATWVKQA |
| Ga0187894_103466922 | 3300019360 | Microbial Mat On Rocks | MFVNQQNRNPVQRAVCLVLAGFIVSIGLATGAFGMHLAERNASAVIVEQIA |
| Ga0173482_102098511 | 3300019361 | Soil | KEIAMFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0190264_103645812 | 3300019377 | Soil | IAMFAIQQNRNPVQRAVCLTLAGFIVSIGLVTGALGMHVAERNASAVIVEQIA |
| Ga0247792_11495042 | 3300022880 | Soil | QNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0207710_103241741 | 3300025900 | Switchgrass Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAV |
| Ga0207688_102759811 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGALGMHVAERNAVATWVKQA |
| Ga0207645_100422823 | 3300025907 | Miscanthus Rhizosphere | MFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0207643_100148792 | 3300025908 | Miscanthus Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERTAVAAVVKHVA |
| Ga0207652_106301392 | 3300025921 | Corn Rhizosphere | TAMFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVRHVA |
| Ga0207687_111577291 | 3300025927 | Miscanthus Rhizosphere | MFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKH |
| Ga0207706_101839651 | 3300025933 | Corn Rhizosphere | MFAIQQNRNSVQRAVCLVLAGFIVSMSLATGAFAMHVA |
| Ga0207703_123651151 | 3300026035 | Switchgrass Rhizosphere | AKEIAMFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0207702_114478523 | 3300026078 | Corn Rhizosphere | AKETAMFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA |
| Ga0207675_1018622662 | 3300026118 | Switchgrass Rhizosphere | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVA |
| Ga0207683_106631451 | 3300026121 | Miscanthus Rhizosphere | NRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA |
| Ga0209814_105252481 | 3300027873 | Populus Rhizosphere | MFAKEVNRNPVEKAVCMALAALIVSLGLATGALGMHAAERNAATWVKQA |
| Ga0209486_101707772 | 3300027886 | Agricultural Soil | MFAIQQNRSPVQRAVCLTLAGFIVSIGLATGALGMHVAERNASAVIVEQIA |
| Ga0207428_100157434 | 3300027907 | Populus Rhizosphere | MFATTTTKLNRSLVERAVCMALAAFIVSVGLATGAFGMHVAERNAVATWVKQA |
| Ga0207428_112124162 | 3300027907 | Populus Rhizosphere | MFATQQNRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA |
| Ga0209382_1000146217 | 3300027909 | Populus Rhizosphere | MFAIQQNRSPVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAVAVVAKHVA |
| Ga0209382_101861652 | 3300027909 | Populus Rhizosphere | MFAIQQNRNLVQRAVCLALAGFIVSMGLATGALGMHVAERNAVAAVVKHVA |
| Ga0209382_104003131 | 3300027909 | Populus Rhizosphere | MFAIQRNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0307500_100860092 | 3300031198 | Soil | MFATTQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA |
| Ga0310887_111220312 | 3300031547 | Soil | RETKETAMFATTQNRTVVERTVCTLLAALIVSVGLATGALGMHVAERNAVSAVVKHVA |
| Ga0307408_1000855052 | 3300031548 | Rhizosphere | MFATTTKMNRSPVERAVCMVLAAFIVSVGLATGALGMHVAERNAVATWVKQA |
| Ga0307408_1001619262 | 3300031548 | Rhizosphere | MFATQRHRNVVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVAKQVA |
| Ga0307408_1009226431 | 3300031548 | Rhizosphere | MFAIQQNRNPVQRAVCLVLAGFIVSIGLATGAFGIHVAERNAAVVIVEQIA |
| Ga0307408_1017984802 | 3300031548 | Rhizosphere | MFAIQRNRNSVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0310886_101143391 | 3300031562 | Soil | MFANNQNRNSVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0310886_101632592 | 3300031562 | Soil | MFATTQNRTVVERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA |
| Ga0307413_107317752 | 3300031824 | Rhizosphere | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGAFGMHVAERNAVAAVVKHVA |
| Ga0310907_100107092 | 3300031847 | Soil | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVSAVVKHVA |
| Ga0310904_102083971 | 3300031854 | Soil | QNRTAAERTVCTLLAALIVSVGLATGALGMHVAERNAVAAVVKHVA |
| Ga0310904_104620102 | 3300031854 | Soil | MFATTQNRTVVERTVCTLLAALIVSVGLATGALGMHVAERNAVSAVVKHVA |
| Ga0310892_106273041 | 3300031858 | Soil | NRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA |
| Ga0310892_107617562 | 3300031858 | Soil | MFAIQRNRNSVQRAVCLVLAGFIVSMGLATGAFGM |
| Ga0307406_107288382 | 3300031901 | Rhizosphere | MFAIRQNRNPAQRAVCLLLAAFIVSTGLATGALGMHVAERNAVAAVVKHVA |
| Ga0307406_113247962 | 3300031901 | Rhizosphere | TPSAMRRSSVHIAWAQNRETKETAMFAIQQNRNLVQRAVCLALAGFIVSMGLATGALGMHVAERNAVAAVVKHVA |
| Ga0310901_103178622 | 3300031940 | Soil | HSPEETAMFATQQNRNSVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVSAVVKHVA |
| Ga0310885_108468102 | 3300031943 | Soil | CRDRSVHINEETAMFATQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA |
| Ga0307416_1003008631 | 3300032002 | Rhizosphere | MFATQRHRNVVQRTVCMLLAAFIVSTGLATGALGMHVAERNAVSAVAKQVA |
| Ga0310897_104823102 | 3300032003 | Soil | MFAIQQNRNSVQRAVCLVLAGFIVSMGLATGAFGMHVAERNAVAAV |
| Ga0307414_108816042 | 3300032004 | Rhizosphere | MFAIQQNRSPVQRAVCLTLAGFIVSIGLATGAFGMHLAERNAAAVIVEQIA |
| Ga0307411_104736132 | 3300032005 | Rhizosphere | MFAIQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA |
| Ga0307411_120327762 | 3300032005 | Rhizosphere | RMDRAKEIAMFASQQNRNPVQRAVCLVLAGFIVSIGLATGALGMHVAERNAAAVVVKHVA |
| Ga0310906_102357122 | 3300032013 | Soil | TAMFATQQNRNTAQRAVCMLLAAFIVSTGLATGALGMHVAERNATAAVVKHVA |
| Ga0310906_112655971 | 3300032013 | Soil | MFATTTTKLDRSPAERAVCMVLAAFIVTVGLATGALGMHVAERNAVATWVK |
| Ga0307415_1000404292 | 3300032126 | Rhizosphere | MFAIQQNRNPVQRAVCLVLAGFIVSIGLATGAFGMHVAERNAAAVIVEQIA |
| Ga0310812_100248632 | 3300032421 | Soil | MFTTTQNRTAAERTVCTLLAALIVSVGLATGALGMLVAERNAVAAVVKHVA |
| Ga0310810_101818412 | 3300033412 | Soil | MFATQRNRSTVQRAVCMLLAAFIVSTGLATGALGMHVAERNAVDAVVKHVA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |