Metagenome / Metatranscriptome Family F072499

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072499
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	53 residues
Representative Sequence	MTTRSAFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG
Number of Associated Samples	96
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.60 %
% of genes near scaffold ends (potentially truncated)	25.62 %
% of genes from short scaffolds (< 2000 bps)	86.78 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.215 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.099 % of family members)
Environment Ontology (ENVO)	Unclassified (29.752 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (29.752 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.78% β-sheet: 0.00% Coil/Unstructured: 51.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00085	Thioredoxin	33.06
PF00126	HTH_1	26.45
PF02566	OsmC	16.53
PF03466	LysR_substrate	15.70
PF02353	CMAS	2.48
PF13414	TPR_11	0.83
PF03950	tRNA-synt_1c_C	0.83
PF01967	MoaC	0.83
PF05684	DUF819	0.83
PF01565	FAD_binding_4	0.83
PF00137	ATP-synt_C	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	16.53
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	16.53
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	2.48
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	2.48
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	2.48
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0315	Molybdenum cofactor biosynthesis enzyme MoaC	Coenzyme transport and metabolism [H]	0.83
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.83
COG5505	Uncharacterized membrane protein YjcL	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.21 %
Unclassified	root	N/A	5.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.21 %
Unclassified	root	N/A	5.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.21 %
Unclassified	root	N/A	5.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.50 %
Unclassified	root	N/A	5.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.66 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12.40 %
Unclassified	root	N/A	5.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.96 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	19.01 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	7.44 %
Unclassified	root	N/A	5.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.01 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	7.44 %
Unclassified	root	N/A	5.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.01 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	7.44 %
Unclassified	root	N/A	5.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.01 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	7.44 %
Unclassified	root	N/A	5.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	19.01 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	7.44 %
Unclassified	root	N/A	5.79 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.13 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Mesorhizobium sp. STM 4661	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	0.83 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1093197	Not Available	550	Open in IMG/M
3300000956\|JGI10216J12902_100668127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	2175	Open in IMG/M
3300000956\|JGI10216J12902_106753966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1021	Open in IMG/M
3300000956\|JGI10216J12902_108346029	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300004067\|Ga0055485_10133537	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300004114\|Ga0062593_101352805	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300004463\|Ga0063356_101467996	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300004463\|Ga0063356_102185588	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300004643\|Ga0062591_100541536	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300005093\|Ga0062594_101078666	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005334\|Ga0068869_101568056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300005345\|Ga0070692_10017599	All Organisms → cellular organisms → Bacteria	3421	Open in IMG/M
3300005406\|Ga0070703_10014361	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300005441\|Ga0070700_101088806	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005444\|Ga0070694_100035325	All Organisms → cellular organisms → Bacteria → Proteobacteria	3303	Open in IMG/M
3300005458\|Ga0070681_10831780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	841	Open in IMG/M
3300005459\|Ga0068867_100468467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1077	Open in IMG/M
3300005530\|Ga0070679_101505914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	620	Open in IMG/M
3300006196\|Ga0075422_10183031	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300006806\|Ga0079220_10216263	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300006854\|Ga0075425_101658154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	720	Open in IMG/M
3300006865\|Ga0073934_10001054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	70194	Open in IMG/M
3300007004\|Ga0079218_10030218	All Organisms → cellular organisms → Bacteria → Proteobacteria	3125	Open in IMG/M
3300007004\|Ga0079218_10204324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1511	Open in IMG/M
3300007004\|Ga0079218_10534175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300007004\|Ga0079218_12028574	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300009087\|Ga0105107_10602662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	765	Open in IMG/M
3300009148\|Ga0105243_10294425	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300009610\|Ga0105340_1077052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300009678\|Ga0105252_10128142	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300010144\|Ga0115593_1204518	Not Available	565	Open in IMG/M
3300010399\|Ga0134127_10067693	All Organisms → cellular organisms → Bacteria → Proteobacteria	3021	Open in IMG/M
3300010399\|Ga0134127_11099062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	859	Open in IMG/M
3300010400\|Ga0134122_10640869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	988	Open in IMG/M
3300010403\|Ga0134123_10456923	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300011428\|Ga0137456_1087953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	790	Open in IMG/M
3300011440\|Ga0137433_1279017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	544	Open in IMG/M
3300011441\|Ga0137452_1142158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	805	Open in IMG/M
3300012212\|Ga0150985_115635189	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300012232\|Ga0137435_1071339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300012882\|Ga0157304_1063234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300012910\|Ga0157308_10071349	All Organisms → cellular organisms → Bacteria → Proteobacteria	958	Open in IMG/M
3300012912\|Ga0157306_10406157	Not Available	534	Open in IMG/M
3300012913\|Ga0157298_10039272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1029	Open in IMG/M
3300012914\|Ga0157297_10110450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	840	Open in IMG/M
3300012915\|Ga0157302_10376834	Not Available	577	Open in IMG/M
3300012943\|Ga0164241_10699094	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300013096\|Ga0157307_1131008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300014297\|Ga0075306_1022084	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300014326\|Ga0157380_10877533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	921	Open in IMG/M
3300014864\|Ga0180068_1036056	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300015200\|Ga0173480_10620309	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300015371\|Ga0132258_10363047	All Organisms → cellular organisms → Bacteria	3586	Open in IMG/M
3300015372\|Ga0132256_102239437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. STM 4661	651	Open in IMG/M
3300017965\|Ga0190266_11300255	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300018422\|Ga0190265_10303931	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300018429\|Ga0190272_11738812	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300018432\|Ga0190275_11580253	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018476\|Ga0190274_10657001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1085	Open in IMG/M
3300018476\|Ga0190274_12701862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	593	Open in IMG/M
3300018481\|Ga0190271_10057709	All Organisms → cellular organisms → Bacteria → Proteobacteria	3351	Open in IMG/M
3300018481\|Ga0190271_10632515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300019356\|Ga0173481_10004555	All Organisms → cellular organisms → Bacteria → Proteobacteria	3647	Open in IMG/M
3300019361\|Ga0173482_10123805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	972	Open in IMG/M
3300019377\|Ga0190264_10152182	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300019377\|Ga0190264_10879846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	696	Open in IMG/M
3300020060\|Ga0193717_1098031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	931	Open in IMG/M
3300020064\|Ga0180107_1203549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300020065\|Ga0180113_1065375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300020146\|Ga0196977_1098304	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300023260\|Ga0247798_1054810	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300023266\|Ga0247789_1079542	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300025165\|Ga0209108_10195996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1046	Open in IMG/M
3300025310\|Ga0209172_10003473	All Organisms → cellular organisms → Bacteria → Proteobacteria	23954	Open in IMG/M
3300025885\|Ga0207653_10096068	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300025907\|Ga0207645_11202361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	509	Open in IMG/M
3300025917\|Ga0207660_10184384	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300025917\|Ga0207660_10234927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1442	Open in IMG/M
3300025936\|Ga0207670_10402799	Not Available	1094	Open in IMG/M
3300025942\|Ga0207689_10935435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	731	Open in IMG/M
3300026089\|Ga0207648_10163522	All Organisms → cellular organisms → Bacteria	1966	Open in IMG/M
3300026118\|Ga0207675_101221586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	772	Open in IMG/M
3300027614\|Ga0209970_1015430	Not Available	1271	Open in IMG/M
3300027886\|Ga0209486_10117256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1432	Open in IMG/M
3300027886\|Ga0209486_10261516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1004	Open in IMG/M
3300027886\|Ga0209486_10710461	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300027886\|Ga0209486_11082486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300028812\|Ga0247825_10241552	Not Available	1255	Open in IMG/M
3300031455\|Ga0307505_10426030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	633	Open in IMG/M
3300031547\|Ga0310887_10378303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	828	Open in IMG/M
3300031548\|Ga0307408_100278591	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300031548\|Ga0307408_100839784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300031562\|Ga0310886_10848598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300031731\|Ga0307405_10106559	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300031740\|Ga0307468_100494670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	968	Open in IMG/M
3300031847\|Ga0310907_10505002	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300031854\|Ga0310904_10394763	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031854\|Ga0310904_10688125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	706	Open in IMG/M
3300031892\|Ga0310893_10187993	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300031913\|Ga0310891_10303644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	563	Open in IMG/M
3300031943\|Ga0310885_10392369	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300032002\|Ga0307416_101654007	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032003\|Ga0310897_10209646	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300032005\|Ga0307411_11544675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	611	Open in IMG/M
3300032012\|Ga0310902_10646624	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300032017\|Ga0310899_10129246	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300032122\|Ga0310895_10788164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300032144\|Ga0315910_10006071	All Organisms → cellular organisms → Bacteria → Proteobacteria	9814	Open in IMG/M
3300032144\|Ga0315910_10041294	All Organisms → cellular organisms → Bacteria	3367	Open in IMG/M
3300032144\|Ga0315910_10162304	All Organisms → cellular organisms → Bacteria	1667	Open in IMG/M
3300032144\|Ga0315910_10162861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1664	Open in IMG/M
3300032144\|Ga0315910_10258148	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300032144\|Ga0315910_10319669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	1180	Open in IMG/M
3300032157\|Ga0315912_10016178	All Organisms → cellular organisms → Bacteria → Proteobacteria	6180	Open in IMG/M
3300032157\|Ga0315912_10090081	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300032157\|Ga0315912_10108895	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300032157\|Ga0315912_10146231	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300032157\|Ga0315912_10372140	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300032174\|Ga0307470_10418619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	953	Open in IMG/M
3300032211\|Ga0310896_10616538	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300034176\|Ga0364931_0253816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.64%
Host-Associated	Host-Associated	17.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.07%
Plants	Host-Associated → Plants	17.36%
Aquatic	Environmental → Aquatic	11.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.26%
Sediment	Environmental → Aquatic → Sediment	5.79%
Freshwater	Environmental → Aquatic → Freshwater	3.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.33%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.31%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.31%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.65%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004067	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010144	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020146	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_10-13C	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_10931971	3300000881	Soil	MTTRSVFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG*
JGI10216J12902_1006681272	3300000956	Soil	MTIRTIRSSRPAKAAANVLSRPREMFGESLPELLLVTAVVAAVVSAVLALNGAS*
JGI10216J12902_1067539663	3300000956	Soil	MTTRKNLGRRSALPTLGALARPHELFGESLPELLLLLAVVAAVISGLVALNGTA*
JGI10216J12902_1083460293	3300000956	Soil	MTTRKDRRFARPIAGALARPRELFGESLPELLLLLAVVAAVISGVVSLNGIS*
Ga0055485_101335371	3300004067	Natural And Restored Wetlands	GGNMKTRVEPGRRVRPVASILARPQEVLGESLPELVLLSAVVAAVVSAAVALNGAG*
Ga0062593_1013528051	3300004114	Soil	MTTRSAFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGVA*
Ga0063356_1014679963	3300004463	Arabidopsis Thaliana Rhizosphere	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGILALNGAG*
Ga0063356_1021855882	3300004463	Arabidopsis Thaliana Rhizosphere	MTTRSAFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG*
Ga0062591_1005415362	3300004643	Soil	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG*
Ga0062594_1010786662	3300005093	Soil	MSVRFILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG*
Ga0068869_1015680562	3300005334	Miscanthus Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALNG
Ga0070692_100175994	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSALLAV
Ga0070703_100143612	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALNGAG*
Ga0070700_1010888061	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKTEEPNMSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG*
Ga0070694_1000353254	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSALLIRGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSALLALNGVS*
Ga0070681_108317801	3300005458	Corn Rhizosphere	MTTRSVFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLA
Ga0068867_1004684673	3300005459	Miscanthus Rhizosphere	MTTRVAFGRRFSRPAAKVLARPRELFGESIPALLLVTAVVAAVVSAVLALNGAG*
Ga0070679_1015059141	3300005530	Corn Rhizosphere	RRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSALLALNGAG*
Ga0075422_101830312	3300006196	Populus Rhizosphere	MSTRLILGRGLSRPVAKALARPRELFGESIPELLLATAVVAAVVSGVLSLTAG*
Ga0079220_102162632	3300006806	Agricultural Soil	MTTLVAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVASAVLALNGVG*
Ga0075425_1016581542	3300006854	Populus Rhizosphere	MSALLIRGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSALLALNGVS*
Ga0073934_1000105469	3300006865	Hot Spring Sediment	MDTRTNPGRRVVRPATKAIAKSRALFGESLPELLLVTAVVAGVVSGAAALAAG*
Ga0079218_100302184	3300007004	Agricultural Soil	MTTLVAYGRRFSRPAARVLGRPRELFGESLPELLLLTAVVAAVVSAVLVLNG*
Ga0079218_102043242	3300007004	Agricultural Soil	MTTRELSRRTARLTADALARPRELFGDSLPELLLVTAVLAAVVSAVLTLNNAG*
Ga0079218_105341751	3300007004	Agricultural Soil	IAMTTRVAFGRRFSRPAAKVLSRPRELFGESLPKLLLLMAVVAAVVSALLAL*
Ga0079218_120285742	3300007004	Agricultural Soil	MTTRKNRGRRLARPAAGVLARPRELFGESLPELLLVTAVVAAVVSAVFALDGAG*
Ga0105107_106026623	3300009087	Freshwater Sediment	MTTRVVPRRKVLPRPTRVSARPRELFGESFPELLLVVAVVAAVVSAVLALNGAG*
Ga0105243_102944252	3300009148	Miscanthus Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG*
Ga0105340_10770522	3300009610	Soil	MTTRNDLGRRSALPTLGALARPRELFGESLPELLLLLAVVAAVISGFVSLNGAG*
Ga0105252_101281421	3300009678	Soil	TRKDFGRRLVRPTVSALAGPRELFGESLPELLLLTAVVVAIVSGVLALNAAG*
Ga0115593_12045181	3300010144	Wetland	MEKEARMTTRKNLGPRRVRPTASVLARPRELFGDSLPELLLLAAVVTAVVSAVLALDGAG
Ga0134127_100676932	3300010399	Terrestrial Soil	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSALLALNGAG*
Ga0134127_110990621	3300010399	Terrestrial Soil	MEMTTRVAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG*
Ga0134122_106408692	3300010400	Terrestrial Soil	MSALLIRGRRLSRPAAKALARPRELFGESIPELLLVTA
Ga0134123_104569231	3300010403	Terrestrial Soil	RFSRPAAKVLARPRELFGESIPELLRVSAVVAAVVSAVLALNGAG*
Ga0137456_10879532	3300011428	Soil	MMTRKDFGRRLVRPTVSALAGPRELFGESLPELLLLTAVVVAIV
Ga0137433_12790172	3300011440	Soil	APRRRLPRPASVLARPRELFGESLPELLLVAAVVAAVVSAVFALNGAG*
Ga0137452_11421583	3300011441	Soil	MMTRKDFGRRLVRPTVSALAGPRELFGESLPELLLLTAVVVAIVSGVLALNAAG*
Ga0150985_1156351893	3300012212	Avena Fatua Rhizosphere	ARIAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG*
Ga0137435_10713392	3300012232	Soil	MDKEVSMTTRNDLGRRRVRPTASVLARPQELFGESLPELLLVAAVVAAVVSAVLALNGAG
Ga0157304_10632341	3300012882	Soil	GRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV*
Ga0157308_100713492	3300012910	Soil	MSVRLTLGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGILALNGAG*
Ga0157306_104061571	3300012912	Soil	MSVRLTLGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG*
Ga0157298_100392722	3300012913	Soil	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGLLALNGAV*
Ga0157297_101104502	3300012914	Soil	MSARLIFGRRLSRPAAKVLARPRELFGESIPELLLVTAVV
Ga0157302_103768341	3300012915	Soil	MSVRWIFGRRLSRPAAKALARPRELFGESIPELLLVTAVV
Ga0164241_106990942	3300012943	Soil	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALSAG*
Ga0157307_11310081	3300013096	Soil	MKTEEVTMSVRLTLGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV*
Ga0075306_10220842	3300014297	Natural And Restored Wetlands	MKTRVEHGRRVRPVASILARPRELLGESLPELVLLSAVVAAVVSAAVALNGAG*
Ga0157380_108775331	3300014326	Switchgrass Rhizosphere	MKTEEVTMSVRFILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG*
Ga0180068_10360563	3300014864	Soil	PAFATRRPSWPAPRELFGESLPELLLVAAVVAAVVSAVFALNGAG*
Ga0173480_106203092	3300015200	Soil	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGILALNG
Ga0132258_103630473	3300015371	Arabidopsis Rhizosphere	MNARVIFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGVG*
Ga0132256_1022394372	3300015372	Arabidopsis Rhizosphere	MNARVIFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVISAVFALNGAG*
Ga0190266_113002552	3300017965	Soil	MTTRNDLGRRSALPTLGALARPRELFGESLPELLLLLAVVAAVISGFVSLNGAG
Ga0190265_103039312	3300018422	Soil	MTTRKDRGRRLARPSAAMLARPRELFGESLPELLLLTAVVAAVVSAVLALSGAG
Ga0190272_117388122	3300018429	Soil	MTTRKNLGRRSARPTLGALARPRELFGESLPELLLLLAVVAAVISGLVSLNGAG
Ga0190275_115802532	3300018432	Soil	MTTRFTPRGLPRPIAKALARPRELFGESLPELLLLTAVLSAVVSAVLALDGVG
Ga0190274_106570012	3300018476	Soil	MTTRNDLGRRSALPTLGALARPRELFGESLPELLLLLAVVAAVISGLASLNGTA
Ga0190274_127018622	3300018476	Soil	MTTRKNLGRSALPTLGVLARPRELFGESLPELLLLLAVVAAVISGL
Ga0190271_100577094	3300018481	Soil	MTTRNALRRRLPRPVAKALARPRELFGESLPELLLLTAVLTAVVSAVLALDGAG
Ga0190271_106325151	3300018481	Soil	MTTRKNLGRRSALPTLEALARPRELFGESLPELLLLLAVVAAVISGLVSLNGTA
Ga0173481_100045552	3300019356	Soil	MSARLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGILALNGAG
Ga0173482_101238052	3300019361	Soil	MKTEELNMSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGA
Ga0190264_101521823	3300019377	Soil	MTTRKDLGRRLGRSTLGSTLRTLPRPRELFGQSLPELLLLTAVVAAVVSAVVALSGAG
Ga0190264_108798461	3300019377	Soil	MTTRKDLGRRLGRSTLGSTLGALPRPRELFGESLPELLLLTAVVAAVVSAVVALSGAG
Ga0193717_10980313	3300020060	Soil	MSVQVALRRRLPRPASVLARPRELFGESLPELLLVAAVIAAVVSAVFALNGAG
Ga0180107_12035491	3300020064	Groundwater Sediment	MMTRKDFGRRLVRPTVSALAGPRELFGESLPELLLLTAVVVAIVSGVLALNAAG
Ga0180113_10653752	3300020065	Groundwater Sediment	MSVYVALRRRLPRPASVSVRPRELFGESLPELLLVAAVIAAVVSAVFALNGAG
Ga0196977_10983042	3300020146	Soil	MTTRKERRRRVARPIAGALARPRELFGESLPELLLVSAVVAAVISGVAALSGA
Ga0247798_10548102	3300023260	Soil	RLIFGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGILALNGAG
Ga0247789_10795421	3300023266	Soil	MSVRLTLGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG
Ga0209108_101959962	3300025165	Soil	MTIRTQRGRHSARSAARLLTRPRELFGESLPELVLLTAIVAAVVSATLALSG
Ga0209172_1000347325	3300025310	Hot Spring Sediment	MDTRTNPGRRVVRPATKAIAKSRALFGESLPELLLVTAVVAGVVSGAAALAAG
Ga0207653_100960681	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALNGAG
Ga0207645_112023612	3300025907	Miscanthus Rhizosphere	MTTRSAFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGVA
Ga0207660_101843841	3300025917	Corn Rhizosphere	EMTTRVAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG
Ga0207660_102349272	3300025917	Corn Rhizosphere	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSALLALNGAG
Ga0207670_104027992	3300025936	Switchgrass Rhizosphere	MTTIVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVS
Ga0207689_109354352	3300025942	Miscanthus Rhizosphere	MKTEEVTMSVRFILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGA
Ga0207648_101635222	3300026089	Miscanthus Rhizosphere	MTTRVAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG
Ga0207675_1012215861	3300026118	Switchgrass Rhizosphere	FGNLMKTEELNMSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV
Ga0209970_10154302	3300027614	Arabidopsis Thaliana Rhizosphere	MSARLIFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNG
Ga0209486_101172563	3300027886	Agricultural Soil	MTTLVAYGRRFSRPAARVLGRPRELFGESLPELLLLTAVVAAVISAVLVLNG
Ga0209486_102615162	3300027886	Agricultural Soil	MTTRELSRRTARLTADALARPRELFGDSLPELLLVTAVLAAVVSAVLTLNNAG
Ga0209486_107104612	3300027886	Agricultural Soil	MTTRKNRGRRLARPAAGVLARPRELFGESLPELLLVTAVVAAVVSAVFALDGAG
Ga0209486_110824861	3300027886	Agricultural Soil	MSARVPARRSLPRPANVLARPREMFGESLPELFLVAAVIAAVVSAVLALNGAG
Ga0247825_102415521	3300028812	Soil	MSVRLILGRRLSRPAAKALARPRELFGESIPELLLVMAVVAAVV
Ga0307505_104260301	3300031455	Soil	MSTRIESFRKSAGPALSVLARPRELFGESLPELALLTAVVAAVVSALVALNGAA
Ga0310887_103783032	3300031547	Soil	MSTRLILGRGLSRPVAKALARPRELFGESIPELLLATAVVAAV
Ga0307408_1002785912	3300031548	Rhizosphere	MSARLIFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGILALNGAG
Ga0307408_1008397842	3300031548	Rhizosphere	MTTRNDRGRRLVRPSLGGLARPRELFGESLPELLLLTAVVAAVVSAVLALNGVG
Ga0310886_108485981	3300031562	Soil	MTTRSVFGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV
Ga0307405_101065592	3300031731	Rhizosphere	MTTRNDRGRRLVRPTLGSLARPRELFGESLPELLLLTAVVAAVVSAVLALNGAG
Ga0307468_1004946701	3300031740	Hardwood Forest Soil	MTTRVAFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVV
Ga0310907_105050022	3300031847	Soil	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSAVLALNGAG
Ga0310904_103947632	3300031854	Soil	MSTRLILGRGLSRPVAKALARPRELFGESIPELLLATAVVAAVVSGVLSLTAG
Ga0310904_106881252	3300031854	Soil	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALNGTG
Ga0310893_101879932	3300031892	Soil	MSVRFILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG
Ga0310891_103036442	3300031913	Soil	LNMSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV
Ga0310885_103923692	3300031943	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAV
Ga0307416_1016540071	3300032002	Rhizosphere	MTTRKDRGRRIARPIRGALARPQELFGESLPELLLATAVVAAVISGVVALSGAG
Ga0310897_102096463	3300032003	Soil	RFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALNGAG
Ga0307411_115446752	3300032005	Rhizosphere	MTTRKGRGRRIARPIRGALARPRELFGESLPELLLATAVVAAVISGVVALSGAG
Ga0310902_106466242	3300032012	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLALNGAG
Ga0310899_101292462	3300032017	Soil	MKKEELNVSARLNLGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVFSLSAG
Ga0310895_107881642	3300032122	Soil	MTTLVVFGRRFSRPAAKVLARPRELFGESIPELLLVSAVVAAVVSAVLALN
Ga0315910_100060715	3300032144	Soil	MNARLILGRRLSRPAAKVLARPRELFGESIPELLLVTAVVAAVVSGVLALSGAG
Ga0315910_100412942	3300032144	Soil	MSARIIRSLEPAREAAANVLARPRELFGESIPELLLVTAVVAAVVSAVFVLNGAG
Ga0315910_101623043	3300032144	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAIVSGVLSLSAG
Ga0315910_101628612	3300032144	Soil	MSTLKNRVRRPARPRADVLARPRELFGESLPELLLVAAVVAAVVSGLFSLNGGI
Ga0315910_102581482	3300032144	Soil	MTTRTTRRSKPARVAANVLARPKELFGESLPELLLVTAVVAAVVSGVLALNGVG
Ga0315910_103196692	3300032144	Soil	MTIRRDRSRRLVRPLETVLPRSRELFGESLPELLLVVAVVAAVVSAVLALNGTG
Ga0315912_100161783	3300032157	Soil	MSARILGRRLAGPAAKVLARPRELFGESLPELLLLTAVVATVVSAVLALNGVA
Ga0315912_100900814	3300032157	Soil	MSARLILGRRLSRPAAKAFARPRELFGESIPELLLVTAVVAAVVSGVLALSAS
Ga0315912_101088953	3300032157	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSGVLSLSAG
Ga0315912_101462313	3300032157	Soil	MTARVLSRRLARPAAKVLGRPRELFGESLPELLLVTAVVAAVISALFTLNGAS
Ga0315912_103721403	3300032157	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVSAVVAAVVSGVLALNGAG
Ga0307470_104186192	3300032174	Hardwood Forest Soil	MKARVIFGRRFSRPAAKVLARPRELFGESIPELLLVTAVVAAVISAVLALNGAG
Ga0310896_106165381	3300032211	Soil	MSARLILGRRLSRPAAKALARPRELFGESIPELLLVTAVVAAVVSG
Ga0364931_0253816_16_180	3300034176	Sediment	MTTRVTRGRRPARPATDVLAGPRELFGESLPELLLFAAVVAAVVSAVLALNGAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072499

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences