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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F072480 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 121 |
| Average Sequence Length | 60 residues |
| Representative Sequence | MTSPEYIRILKLDKIAMKSKTRLEFLEAVKARLQFAKNLGVEGSFPYFVEQAWQIFGDGK |
| Number of Associated Samples | 72 |
| Number of Associated Scaffolds | 121 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 80.83 % |
| % of genes near scaffold ends (potentially truncated) | 21.49 % |
| % of genes from short scaffolds (< 2000 bps) | 87.60 % |
| Associated GOLD sequencing projects | 66 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.78 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (48.760 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (23.140 % of family members) |
| Environment Ontology (ENVO) | Unclassified (23.140 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Unclassified (35.537 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.41% β-sheet: 0.00% Coil/Unstructured: 46.59% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.78 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| f.37.1.1: ABC transporter transmembrane region | d3g60a1 | 3g60 | 0.62296 |
| a.70.2.1: Cas Cmr5-like | d2oeba1 | 2oeb | 0.6226 |
| a.4.9.1: Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | d1e3pa1 | 1e3p | 0.61316 |
| c.52.1.25: Exodeoxyribonuclease V beta chain (RecC), C-terminal domain | d1w36c3 | 1w36 | 0.61108 |
| a.283.1.1: Emsy N terminal (ENT) domain-like | d1uz3a_ | 1uz3 | 0.61099 |
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| Pfam ID | Name | % Frequency in 121 Family Scaffolds |
|---|---|---|
| PF11066 | DUF2867 | 4.13 |
| PF00118 | Cpn60_TCP1 | 2.48 |
| PF13185 | GAF_2 | 2.48 |
| PF11381 | DUF3185 | 1.65 |
| PF14748 | P5CR_dimer | 1.65 |
| PF08734 | GYD | 1.65 |
| PF02405 | MlaE | 0.83 |
| PF08245 | Mur_ligase_M | 0.83 |
| PF00248 | Aldo_ket_red | 0.83 |
| PF04961 | FTCD_C | 0.83 |
| PF07494 | Reg_prop | 0.83 |
| PF14716 | HHH_8 | 0.83 |
| PF13229 | Beta_helix | 0.83 |
| PF07676 | PD40 | 0.83 |
| PF00069 | Pkinase | 0.83 |
| PF07883 | Cupin_2 | 0.83 |
| PF01266 | DAO | 0.83 |
| PF00326 | Peptidase_S9 | 0.83 |
| PF13205 | Big_5 | 0.83 |
| PF01906 | YbjQ_1 | 0.83 |
| PF14346 | DUF4398 | 0.83 |
| PF13860 | FlgD_ig | 0.83 |
| PF04191 | PEMT | 0.83 |
| PF04226 | Transgly_assoc | 0.83 |
| PF05015 | HigB-like_toxin | 0.83 |
| PF05768 | Glrx-like | 0.83 |
| PF07228 | SpoIIE | 0.83 |
| PF17167 | Glyco_hydro_36 | 0.83 |
| PF07221 | GlcNAc_2-epim | 0.83 |
| PF01145 | Band_7 | 0.83 |
| PF00873 | ACR_tran | 0.83 |
| PF00196 | GerE | 0.83 |
| PF01493 | GXGXG | 0.83 |
| PF00072 | Response_reg | 0.83 |
| COG ID | Name | Functional Category | % Frequency in 121 Family Scaffolds |
|---|---|---|---|
| COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 3.31 |
| COG0459 | Chaperonin GroEL (HSP60 family) | Posttranslational modification, protein turnover, chaperones [O] | 2.48 |
| COG4274 | Uncharacterized conserved protein, contains GYD domain | Function unknown [S] | 1.65 |
| COG0393 | Uncharacterized pentameric protein YbjQ, UPF0145 family | Function unknown [S] | 0.83 |
| COG0695 | Glutaredoxin | Posttranslational modification, protein turnover, chaperones [O] | 0.83 |
| COG0767 | Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla | Cell wall/membrane/envelope biogenesis [M] | 0.83 |
| COG2261 | Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family | General function prediction only [R] | 0.83 |
| COG2942 | Mannose or cellobiose epimerase, N-acyl-D-glucosamine 2-epimerase family | Carbohydrate transport and metabolism [G] | 0.83 |
| COG3118 | Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family | Posttranslational modification, protein turnover, chaperones [O] | 0.83 |
| COG3292 | Periplasmic ligand-binding sensor domain | Signal transduction mechanisms [T] | 0.83 |
| COG3404 | Formiminotetrahydrofolate cyclodeaminase | Amino acid transport and metabolism [E] | 0.83 |
| COG3549 | Plasmid maintenance system killer protein | Defense mechanisms [V] | 0.83 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 50.41 % |
| Unclassified | root | N/A | 48.76 % |
| Heliobacterium | genus | Heliobacterium | 0.83 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 23.14% |
| Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 11.57% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 9.09% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 8.26% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 7.44% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 6.61% |
| Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 5.79% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 5.79% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 3.31% |
| Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 2.48% |
| Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment | 2.48% |
| Freshwater | Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater | 2.48% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil | 2.48% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.65% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 1.65% |
| Sediment | Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment | 1.65% |
| Anoxic Zone Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater | 0.83% |
| Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.83% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 0.83% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.83% |
| Active Sludge | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge | 0.83% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000030 | Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Bulk | Environmental | Open in IMG/M |
| 3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
| 3300002961 | Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk | Environmental | Open in IMG/M |
| 3300003432 | Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk | Environmental | Open in IMG/M |
| 3300003541 | Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk | Environmental | Open in IMG/M |
| 3300004155 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 | Environmental | Open in IMG/M |
| 3300004282 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment | Environmental | Open in IMG/M |
| 3300005833 | Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK | Environmental | Open in IMG/M |
| 3300006224 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG | Environmental | Open in IMG/M |
| 3300009009 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 | Environmental | Open in IMG/M |
| 3300009037 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
| 3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
| 3300009082 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 | Environmental | Open in IMG/M |
| 3300009091 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300009111 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 | Environmental | Open in IMG/M |
| 3300009166 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009167 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2) | Environmental | Open in IMG/M |
| 3300009179 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 | Environmental | Open in IMG/M |
| 3300012533 | Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG | Engineered | Open in IMG/M |
| 3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
| 3300012964 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG | Environmental | Open in IMG/M |
| 3300013080 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300013315 | Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B | Engineered | Open in IMG/M |
| 3300014490 | Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG | Environmental | Open in IMG/M |
| 3300014498 | Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG | Environmental | Open in IMG/M |
| 3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300018055 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex | Environmental | Open in IMG/M |
| 3300018070 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1 | Environmental | Open in IMG/M |
| 3300019785 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction) | Environmental | Open in IMG/M |
| 3300021075 | Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20m | Environmental | Open in IMG/M |
| 3300022185 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022516 | Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 30-34 | Environmental | Open in IMG/M |
| 3300026486 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PR6 | Environmental | Open in IMG/M |
| 3300026501 | Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4 | Environmental | Open in IMG/M |
| 3300027731 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027740 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 HiSeq | Environmental | Open in IMG/M |
| 3300027762 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027818 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027871 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027885 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes) | Environmental | Open in IMG/M |
| 3300027896 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes) | Environmental | Open in IMG/M |
| 3300027897 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes) | Environmental | Open in IMG/M |
| 3300027902 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes) | Environmental | Open in IMG/M |
| 3300031726 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300031997 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0 | Environmental | Open in IMG/M |
| 3300032070 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20 | Environmental | Open in IMG/M |
| 3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
| 3300032177 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0 | Environmental | Open in IMG/M |
| 3300032397 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0 | Environmental | Open in IMG/M |
| 3300032401 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0 | Environmental | Open in IMG/M |
| 3300032516 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0 | Environmental | Open in IMG/M |
| 3300032770 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5 | Environmental | Open in IMG/M |
| 3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
| 3300033406 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT | Environmental | Open in IMG/M |
| 3300033408 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT | Environmental | Open in IMG/M |
| 3300033413 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT | Environmental | Open in IMG/M |
| 3300033416 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C | Environmental | Open in IMG/M |
| 3300033418 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A | Environmental | Open in IMG/M |
| 3300033419 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300033434 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b | Environmental | Open in IMG/M |
| 3300033480 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B | Environmental | Open in IMG/M |
| 3300033482 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C | Environmental | Open in IMG/M |
| 3300033483 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A | Environmental | Open in IMG/M |
| 3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
| 3300033487 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A | Environmental | Open in IMG/M |
| 3300033488 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C | Environmental | Open in IMG/M |
| 3300033489 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214 | Environmental | Open in IMG/M |
| 3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
| 3300034070 | Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M | Environmental | Open in IMG/M |
| 3300034128 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| WSSedB1B_0281672 | 3300000030 | Wetland | MTSPDYIRILKLDKIAMKSKTQADYLETAKAREQYAKNLGVGESFPYFVEQAWLIFGDGRQSA* |
| JGIcombinedJ13530_1015050473 | 3300001213 | Wetland | MMTPDYVRILKLDKIALISKTLPEFLQAVKARLQFARNLGVEENFPYFVQQAWLAFGD |
| JGIcombinedJ13530_1015215211 | 3300001213 | Wetland | MVTQLPGRSGKEEAMAPPEYIKILKLDKIALKSKTKLEFLEGAQTRLQYAKNLGVEKSFEFFVEQAWLIFGTGK* |
| JGIcombinedJ13530_1018201852 | 3300001213 | Wetland | MTSPNYIKILKLDKTALKSKTKPDYLEAAEAHRQQARTLGVEESFSYFVDEAWAMFGDGK |
| JGIcombinedJ13530_1051206911 | 3300001213 | Wetland | MISPDYVKILKLDKIAMKSKTELEFLDAAKGRLQFARNLGVEKSFPYFVAQAWSMFGDGT |
| JGIcombinedJ13530_1064959762 | 3300001213 | Wetland | MTSPDYIRILKLDKLAMKSKTYPDFLQAVKGRLQYAKNLGVEGSFTFFVDRAWGLFGDGK |
| JGIcombinedJ13530_1069938561 | 3300001213 | Wetland | MTSPDYIRILKLDRIAMKSKTLPEFLRAAKARLPFAKNLGVEKSFTYFVEHAWLIFGNGK |
| JGIcombinedJ13530_1075004152 | 3300001213 | Wetland | MPPPEYIKLLKLDKIALKSKTKLAFLEAVKPCLPYAKNLGVEESFEFFVEQAWLIFGTGE |
| JGIcombinedJ13530_1103138672 | 3300001213 | Wetland | MISPNYVKILKLDKIAMKSKTQLDFLDAAKGRLQFARNLGVEKSFPYFVAQAWSMFGDGT |
| JGI11641J44799_100124483 | 3300002961 | Wetland | MAAPEYISILKLDKIAMKSKTKRDFLEAAKARLQYAKNLGVEKSFAFFVEQAWREFGDGK |
| JGI20214J51088_100330503 | 3300003432 | Wetland | MTSPDYIRILKLDKIAMKSKTKPDFLETVKACEQFAKNLGVEESFPYFVEQAWLIFGDGM |
| JGI20214J51088_100536273 | 3300003432 | Wetland | MISPEYIKILKLDKIAMKSKTQLDFLEAAKARQQYAKNLGVEGSFQYFVEQAWLLFGNGK |
| JGI20214J51088_104345792 | 3300003432 | Wetland | VRILKLDKIALISKTLPEFLQAVKARLQFARNLGVEENFPYFVQQAWLAFGDGK* |
| JGI20214J51650_111207941 | 3300003541 | Wetland | MMTPDYVRILKLDKIALISKTLPEFLQAVKARLQFARNLGVEENFPYFVQQAWLAFG |
| Ga0066600_101091773 | 3300004155 | Freshwater | MSAPDYVKILKLDKIAMKSKTRLEFLNAVKPRLQYAKNIGVEWSFPFFVERAWGIFGDGL |
| Ga0066600_106427011 | 3300004155 | Freshwater | MATPDYIKILTLDKIALKSKTQEDFLEKVKPRLQFAKNLGVEENFEYFVQQAWRIYGD |
| Ga0066599_1007207122 | 3300004282 | Freshwater | MSAPDYVKILKLDKIAMKSKTRLEFLNAVKPRLQYAKNIGVEGSFPFFVERAWGIFGDGL |
| Ga0074472_103925482 | 3300005833 | Sediment (Intertidal) | MTSPDYIRILKLDKIAMKSKTRLDFLMAVKARLQFAKNLGVEGSFPYLVEQAWLIFGDGE |
| Ga0079037_1002570152 | 3300006224 | Freshwater Wetlands | MPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK |
| Ga0079037_1002989812 | 3300006224 | Freshwater Wetlands | MVAQLPGSQGNDRVMAPPEYIKLLKLDKLALKSKTKLEFLESAQSRLQYAKNLGVEESFEFFVEQAWLIFGTGKS* |
| Ga0079037_1022148562 | 3300006224 | Freshwater Wetlands | MISKLPGLSGREYVMAPPEYIKILKLDKLALKSKTKLEYLESAQSRLQYAKNLGVEESFEFFVEQAW |
| Ga0105105_101321992 | 3300009009 | Freshwater Sediment | MTTPDYVRILKLDEIAMQSKTLSEYLEAVKARLPFARNLRVEGTFSYFVEQAWLVFGDGK |
| Ga0105093_103943711 | 3300009037 | Freshwater Sediment | MTTPDYMKILKLDKVAMKSKTLPEFLQAVKERLQFAKNLGVEATFPYFVQQAWLVYGDGK |
| Ga0105093_104587531 | 3300009037 | Freshwater Sediment | MAPPEYIKILKLDKIALKSKTKLEFLEAVKPRLQFAKNLGVGESFEFFVEQAWLIFGSGK |
| Ga0105106_105051842 | 3300009078 | Freshwater Sediment | VYRQRGLFGRDDLMAPPEYIKILKLDKIALKSKTKLEFLEAVKPRLQYAKNLGVGESFEFFVEQAWLIFGSGK* |
| Ga0105106_106655841 | 3300009078 | Freshwater Sediment | MAPPDYIKILKLDKIALKSKTKLDFLEAVKPRLQFAKNLGVGESFDFFVEQAWLFFGSGK |
| Ga0105099_109918991 | 3300009082 | Freshwater Sediment | MPPGVLRRDDVMAPPDYIKILKLDKIALKSKTKLDFLEAVKPRLQFAKNLGVGESFDFFVEQAWLIFGSGK* |
| Ga0102851_102146462 | 3300009091 | Freshwater Wetlands | MAPPEYIKLLKLDKLALKSKTKLEFLESAQSRLQYAKNLGVEESFEFFVEQAWLIFGTGKS* |
| Ga0102851_117801491 | 3300009091 | Freshwater Wetlands | MTTPDYMKILKLDKVAMKSKTLPEFLQAVKARLPFAKNLGVEATFPYFVQQA |
| Ga0102851_127525672 | 3300009091 | Freshwater Wetlands | MRQRKHMHTPDYIKILKLDKIAMRSKTHSEYVIAVKPRLQYARNLGVEGSFLWFVD |
| Ga0115026_103965572 | 3300009111 | Wetland | MTEGDEDMPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK* |
| Ga0105100_105443852 | 3300009166 | Freshwater Sediment | VYRQRGLFGRDDLMAPPEYIKILKLDKIALKSKTKLDFLEAVKPRLQFAKNLGVGESFDFFVEQAWLIFGSGK* |
| Ga0113563_110077822 | 3300009167 | Freshwater Wetlands | MTEGDEVMPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK* |
| Ga0115028_107755532 | 3300009179 | Wetland | MTTPNYIQILRLDKIAMKSKTLSEYLQAAKARLQFAENLGVDEIFYYFVDEAWLVYGNGIDPGQRR* |
| Ga0138256_114088922 | 3300012533 | Active Sludge | MISPNYIKLLKLDKIALKSKTRADFLHAAQQRLQFARNLGVETSFSFFVDRAWA |
| Ga0153915_103121953 | 3300012931 | Freshwater Wetlands | MTMQHRRSIKREEAMAPPDYMRILKLDKMALKSKTRLDFLEAVKARLQFAKNLGVEGSFPFFVEQAWLLYGDGK* |
| Ga0153915_105597422 | 3300012931 | Freshwater Wetlands | MAPPDYMRILKLDKIALKSKTHMDFLEAVKARLQFAKNLGVEGSFPFFVEQAWLLFGDGT |
| Ga0153915_106511912 | 3300012931 | Freshwater Wetlands | MTSPNYIQILKLDKIAMKSKTHLDFLKAVQGRLQFAKNLGVEESFPYFVEQAWLIFGDGK |
| Ga0153915_107468042 | 3300012931 | Freshwater Wetlands | MQHRRSLKREEAMAPLDYMRILKLDKIALKSKTQRDYHEAVKARLQFAKNLGVEGSFAFFVDQAWLLFGDGK* |
| Ga0153915_110201541 | 3300012931 | Freshwater Wetlands | MPHGSSLKREEAMAPPDYIRILKLDKIALKSKTKRDFLEAVKARLQFAKNLGVEGSFPFFVDQAWLLFGDGK* |
| Ga0153915_121965451 | 3300012931 | Freshwater Wetlands | MKILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEATFPYFVQQAWLVYGDGK* |
| Ga0153916_129836791 | 3300012964 | Freshwater Wetlands | MTTPDYIRILKLDKIAMKSKTHLDFLKAVKARLQYAKNLGVEGSFPYFVEQAWLLFGDGM |
| Ga0153913_12411741 | 3300013080 | Freshwater Wetlands | AMAPPDYIRILKLDKIALKSKTKRDFLEAVKARLQFAKNLGVEGSFPFFVDQAWLLFGDGK* |
| Ga0173609_105066973 | 3300013315 | Sediment | MGTPDYVKILKLDKIAMKSKNRLDFLNAVKPRLQYAKNIGVEGSFPFFVERAWGIFGDGL |
| Ga0173609_107663912 | 3300013315 | Sediment | MTSPDYIRILKLDKLALKSKTYPDFLQAVKGRLQYAKNLGVEGSFPFFVERAWGMFGDGK |
| Ga0182010_100568682 | 3300014490 | Fen | MRTPDYINILKLDRIAMKSKPRPDFLSAVKPRLQYARNLGVEGSFLFFVEGAWGIFGDGK |
| Ga0182010_101745651 | 3300014490 | Fen | SGKNNSGTKHMKTPDYMKLLKLDAIAMKSKTRSDFLEAVKPRIHFARNLGVEGSFAFFVESAWGMFGDGQ* |
| Ga0182019_102370115 | 3300014498 | Fen | MTTPDYVKILKLDELALNANTHSDFLKVVKARLQYARNLGVAESFSFFVDRAWLLFGNGE |
| Ga0182019_103114601 | 3300014498 | Fen | MKTPDYMKLLKLDAIAMKSKTRSDFLEAVKPRIHFARNLGVEGSFAFFVESAWGMFGDGQ |
| Ga0182021_100078786 | 3300014502 | Fen | MRTPDYIKILKLDRIAMKSKTRPDFLSAVKPRLQYARNLGVEGSFLFFVERAWGIFGDGK |
| Ga0182021_101797292 | 3300014502 | Fen | MKTPDYMKLLKLDAIAMKSKTRSDFLEAVKPRIHFARNLGVEGSFAFFVESA* |
| Ga0182021_106587112 | 3300014502 | Fen | MITPDYVRILKLDKLAMKSKSHSAFLEVVKGRLQYARNLGVGGSFPFFVDQAWSIYGNGE |
| Ga0182021_106614751 | 3300014502 | Fen | MAAPEYIKILKLDKIAMKSKTRLDFLEAVKSRAQYAKNLGVEGSFPFFVDQAWQIFGSCE |
| Ga0182021_130929371 | 3300014502 | Fen | DYIRILKLDKIAMKSKTRTIYLEAAKARLQFARNLGVEGSFPYFVEQAWLFFGDGK* |
| Ga0182021_136776881 | 3300014502 | Fen | MITPDYVKILKLDELAMNANTHSDFLKVVKARLQHARNLGVAESFSFFVDRAWLLFGN |
| Ga0184616_100817423 | 3300018055 | Groundwater Sediment | MTTPNYMKILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEATFPYFVQQAWLVYGDGS |
| Ga0184631_101520792 | 3300018070 | Groundwater Sediment | MTTPNYMKILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEATFPYFVQQAWLVYGDGN |
| Ga0182022_10966051 | 3300019785 | Fen | MTTPDYIKILKLDKLAMKSKTRADFRNAVKPRLQYARNLGVGGSFSFFVDRAWLLFGSGK |
| Ga0194063_101541153 | 3300021075 | Anoxic Zone Freshwater | MITPDYIKILKLDKIAMKSKTRLDFLHDAEPRLQFARNLGVQRNFRFFVERAWGMFGDGE |
| Ga0079039_10400641 | 3300022185 | Freshwater Wetlands | KIAMKSKTLPEFLLAVKARLQFARNLGVEGDFPYFVQQAWLSFGDGL |
| Ga0224542_10293251 | 3300022516 | Soil | MTSPDYIRILKLDKIAMKSKTRTIYLEAAKARLQFARNLGVEGSFPYFVEQAWLI |
| Ga0256820_10241172 | 3300026486 | Sediment | RILKLDKIAMKSKTKVEFLEAVKLRLQYAKNLGVEGSFSYFVEQAWLIFGDGK |
| Ga0256806_10895571 | 3300026501 | Sediment | MMAPPEYIRILKLDKIAMKSKTKVEFLEAVKLRLQYAKNLGVEGSFSYFVEQAWLIFGDG |
| Ga0256806_11153011 | 3300026501 | Sediment | MAPPEYIHILKLDKLAMKSKTKREFLEAVKSRLQFAKNLGVEESFSYFVEQAWLLYG |
| Ga0209592_10038542 | 3300027731 | Freshwater Sediment | MTTPDYVRILKLDKIAMKSETLAEFLQAVKARLQFAKNLGVDGTFPYFVQQAWLVFGDGA |
| Ga0214474_12885952 | 3300027740 | Soil | MRQRKHVHTPDYIKILKLDKIAMRSKTHSEYVIAVKPRLQYARNLGVEGSFLWFVDRAWAGFGDGL |
| Ga0209288_102857361 | 3300027762 | Freshwater Sediment | MVTPDYIRILKLDKIAMKSKTLQEYHEAVKARLPFARNLRVEGNFAYFVEQAWLVFGNGH |
| Ga0209706_103047562 | 3300027818 | Freshwater Sediment | MAPPDYIKILKLDKIALKSKTKLDFLEAVKPRLQFAKNLGVGESFDFFVEQAWLIFGSGK |
| Ga0209397_105427451 | 3300027871 | Wetland | DMPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTG |
| Ga0209450_100760743 | 3300027885 | Freshwater Lake Sediment | MTSPDYIQILKLDKIAMKSKTHLDFLEAVKARLQYAKNLGVEGSFPFFVERAWWFFGDGK |
| Ga0209450_103466622 | 3300027885 | Freshwater Lake Sediment | MTSPDYITILKLDKIAMKSKTYSDFLQAVQGRLQYAKNLGVEGSFSFFVERAWGMFGDGK |
| Ga0209777_102224563 | 3300027896 | Freshwater Lake Sediment | MKSPDYVRILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEGTFPYFVQQAWLIFGDGK |
| Ga0209777_108158612 | 3300027896 | Freshwater Lake Sediment | MVSPEYIRILKLDKLAMKSKTRLDFLEAAKARLQYAKNLGVEGSFPYFVEQAWQIFGDGK |
| Ga0209254_105331411 | 3300027897 | Freshwater Lake Sediment | MAPPEYIKLLKLDKIALKSETKLDFLEAVKPRLQFAKNLGVEESFEFFVEQAWLIFGTGK |
| Ga0209254_110168621 | 3300027897 | Freshwater Lake Sediment | MSTPDYIKILKLDKIAMKSKTRLEFLNAVKPRLQYAKNIGVEGSFPFFVERAWGIFGDGL |
| Ga0209048_101350892 | 3300027902 | Freshwater Lake Sediment | MISPDYVRILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEGTFPYFVQQAWLIFGDGK |
| Ga0302321_1006032892 | 3300031726 | Fen | MTTPDYVKILKLDKLAMKSKTHADYLKVVKKRLQYARNLGVEGSFSFFVDRAWVNFGSGM |
| Ga0315290_104007761 | 3300031834 | Sediment | MTSPDYISILKLDKIAMKSKSYSDFLQAVKGRLQYAKNLGVEGSFSFFVDRAWGIFGDGK |
| Ga0315278_100832082 | 3300031997 | Sediment | MTSPDYIQILKLDKIAMKSKTHLDFLEAVKARLQYAKNLGVEGSFPFFVERAWWFFGDGT |
| Ga0315279_103141532 | 3300032070 | Sediment | MITPDYIRILKLDRIALKSKTLPEYLQAVKARLQFARNLGVEGTFSYFVERAWLVFGDGK |
| Ga0315283_122723731 | 3300032164 | Sediment | MTSPDYIRILKLDKLALKSKTYPDFLQAVKGRLQYAKNLGVEGSFPFFVERAWGIFGDGK |
| Ga0315276_108852052 | 3300032177 | Sediment | MAPPEYIKILKLDKIALKSKTKPDFLEAVKPRLQFAKNLGVEESFEFFVEQAWLIFGTGK |
| Ga0315287_106348553 | 3300032397 | Sediment | NYIQILKLDKIAMKSKTQLDFLKAVKARLQFAKNLGVEGSFPYFVEQAWLIFGDGK |
| Ga0315275_102551694 | 3300032401 | Sediment | MTSPNYIQILKLDKIAMKSKTQLDFLKAVKARLQFAKNLGVEGSFPYFVEQAWLIFGDGK |
| Ga0315273_105388541 | 3300032516 | Sediment | MKTPDYVLILKLDKIAMKSKTQLDFLEAVKARQPFAKNLGVEGSFPFFVEQAWLIYGDGK |
| Ga0335085_104395852 | 3300032770 | Soil | MTSPDYIKILKLDKIAMKSRTRMIYLDAAKARLQFARNLGVEWSFPYFVEQAWLIFGDGK |
| Ga0335070_103571202 | 3300032829 | Soil | LTTPDYIKILKLDKLAMKAKTHSEYLVAVKERLQYAKNVGVEKNFTFFVERAWLLFGTKE |
| Ga0316604_100691182 | 3300033406 | Soil | MTTPNYIQILRLDKIAMKSKTLSEYLQAAKARLQFAENLGVDEIFYYFVDEAWLVYGNGIDPGQRR |
| Ga0316604_105930052 | 3300033406 | Soil | MMAPPEYIKILKLDKIALKSKTKPDFLEAVKPRLQYAKNLGVGESFEFFVEQAWLIFGTG |
| Ga0316605_105987062 | 3300033408 | Soil | MAPPEYIKLLKLDKLALKSKTKLEFLESAQSRLQYAKNLGVEESFEFFVEQAWLIFGTGK |
| Ga0316605_106207581 | 3300033408 | Soil | DYIRILKLDKIAMKSKTRLEFLEAVKSRLQFARNLGVEEDFPYFVEQAWLIFGDGR |
| Ga0316605_107139772 | 3300033408 | Soil | MTTPDYMKILKLDKVAMKSKTLPEFLQAVKARLQFAKNLGVEATFPYFVQQAWLVYGDGK |
| Ga0316603_110399302 | 3300033413 | Soil | PDYVKILKLDKIAMKSKTRLEFLNAVKPRLQYAKNIGVEGSFPFFVERAWGIFGDGL |
| Ga0316622_1004007902 | 3300033416 | Soil | MAPPEYIKLLKLDKLALKSKTKLEFLESAQSRLQYAKNLGVEESFEFFVEQAWLIF |
| Ga0316622_1027112521 | 3300033416 | Soil | MTSPDYIRILKLDRIAMKSKTLPEFLRAAKARRQFAKNLGVEKSFSYFVEHAWLIFGNGK |
| Ga0316622_1030585552 | 3300033416 | Soil | MIEGDEDMPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK |
| Ga0316625_1004880811 | 3300033418 | Soil | RRWMTEGDEVMAPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK |
| Ga0316625_1014348952 | 3300033418 | Soil | MSTPDYVKILKLDKIAMKSKTRLEFLNAVKPRLQYAKNIGVEGSFPFFVERAWGIFGDGL |
| Ga0316601_1026894581 | 3300033419 | Soil | MISPDYIRILKLDKIAMKSKTRLEFLEAVKSRLQFARNLGVEEDFPYFVEQAWLIFGDGR |
| Ga0326726_1000170112 | 3300033433 | Peat Soil | MTPPEYIRILKLDKIAMRSKTKLDFLEAVKARLQFAKNLGVEGSFAFFVEQAWLLFGDGK |
| Ga0326726_100411562 | 3300033433 | Peat Soil | MKESEEAMTSPDYIKILKLDKIAMKSKTHMAYLDAAKARLQFARNLGVEGSFPYFVEQAWLMFGDGT |
| Ga0316613_109018841 | 3300033434 | Soil | MISKLPGLSGREYVMAPPEYIKILKLDKLALKSKTKLEYLESAQSRLQYAKNLGVEESFEFFVEQAWLIFGTGK |
| Ga0316620_103808432 | 3300033480 | Soil | MATPDYIRILKLDKIALKSKTQADFLEAAKARLQYAKNLGVGESFRFLVERAWRIFGDGK |
| Ga0316620_105245853 | 3300033480 | Soil | MAPPDYMRILKLDKMALKSKTRLDFLEAVKARLQFAKNLGVEGSFPFFVEQAWLLYGDGK |
| Ga0316620_109630373 | 3300033480 | Soil | MITPDYVKILKLDKLALSSATHSDFLKVVKGRLQYARNLGVEGSFPFFVDRAWSVFGNGE |
| Ga0316620_114748381 | 3300033480 | Soil | MTTPNYIQILKLDKIAMKSKTLPEYLQAAKERLHYAENLGVEGIFYYFVDQAWLRFGNGK |
| Ga0316620_122176852 | 3300033480 | Soil | DKIAMKSKTLSEYLQASKARLPFAKNMGLEETFFYFVDQAWLVFGDGK |
| Ga0316627_1008303602 | 3300033482 | Soil | MTEGDEDMPPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK |
| Ga0316627_1010065682 | 3300033482 | Soil | MTTPNYIQILRLDKIAMKSKTLSEYLQAAKARLQFAENLGVDEIFYYFVDEAWL |
| Ga0316629_117110021 | 3300033483 | Soil | MAPPEYIKLLKLDKLALKSKTKLEYLESAQSRLQYAKNLGVEESFEFFVEQAWLIFGTGK |
| Ga0316624_109504242 | 3300033486 | Soil | MGIKREEKMSTPNYIRTLKLDKIAMKSKTLSEYLQASKARLPFAKNMGLEETFFYFVDQAWLVFGDGK |
| Ga0316624_109946041 | 3300033486 | Soil | MVTPDYVKILKLDKLAMKSKTHSEFLGLVKDRLQYARNLGVEKSFPYFVDRAWVLFGDGK |
| Ga0316630_122357911 | 3300033487 | Soil | MTEGDEVMAPPEYIKILKLDKLAMKSQTKLEFFEAAMPRLQFAKNLGVEESFSFFLDQAWLLFGTGK |
| Ga0316621_113610841 | 3300033488 | Soil | MAPPEYIKLLKLDKLALKSKTKLEFLESAQSRLQYAKNLGVEESFEFFVEQAW |
| Ga0299912_102371302 | 3300033489 | Soil | MITPDYIRILKLDKIALKSKTLPEFLQAVKARLQFAKNLGVEGDFPYFVQQAWLSFGDGL |
| Ga0299912_103348012 | 3300033489 | Soil | MHTPDYIKILKLDKIAMKSRTHSEYVIAVKPRLQYARNLGVEGSFLWFVDRAWAGFGDGL |
| Ga0316628_1009826643 | 3300033513 | Soil | MAPPDYMRILKLDKMALKSKTRLDFLEAVKARLQFARNLGVEGSFPFFVEQAWLLYGDGK |
| Ga0334822_000130_9868_10050 | 3300034070 | Soil | MTSPEYIRILKLDKIAMKSKTRLEFLEAVKARLQFAKNLGVEGSFPYFVEQAWQIFGDGK |
| Ga0334822_048907_740_919 | 3300034070 | Soil | RTPDYIKILKLDRIAMKSKTRPDFLSAVKPRLQYARNLGVEGSFLFFVERAWGIFGDGK |
| Ga0334822_056385_618_800 | 3300034070 | Soil | MTSPDYIRILKLDKIAMKSKTRTIYLEAAKARLQFARNLGVEGSFPYFVEQAWLIFGDGK |
| Ga0370490_0000013_76401_76583 | 3300034128 | Untreated Peat Soil | LKTPDYIKILKLDRIAMRSKTRPDYIRAVKPRLQYARNLGVEGNFDFFVDRAWGIFGDGS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |