Metagenome / Metatranscriptome Family F072477

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072477
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	102 residues
Representative Sequence	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Number of Associated Samples	80
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	65.29 %
% of genes near scaffold ends (potentially truncated)	32.23 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.413 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (25.620 % of family members)
Environment Ontology (ENVO)	Unclassified (70.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (49.587 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 43.85% β-sheet: 0.00% Coil/Unstructured: 56.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF10865	DUF2703	2.48
PF00245	Alk_phosphatase	2.48
PF06348	DUF1059	2.48
PF05534	HicB	1.65
PF03928	HbpS-like	1.65
PF13590	DUF4136	0.83
PF04073	tRNA_edit	0.83
PF00384	Molybdopterin	0.83
PF03741	TerC	0.83
PF00239	Resolvase	0.83
PF16113	ECH_2	0.83
PF06271	RDD	0.83
PF00378	ECH_1	0.83
PF02954	HTH_8	0.83
PF07670	Gate	0.83
PF01575	MaoC_dehydratas	0.83
PF00708	Acylphosphatase	0.83
PF13426	PAS_9	0.83
PF01541	GIY-YIG	0.83
PF00072	Response_reg	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1785	Alkaline phosphatase	Inorganic ion transport and metabolism [P]	2.48
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	1.65
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	1.65
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.83
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
All Organisms	root	All Organisms	49.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
cellular organisms	root	All Organisms → cellular organisms	49.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	14.05 %
candidate division Zixibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria	7.44 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14.05 %
unclassified candidate division Zixibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria	7.44 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.83 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.26 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	7.44 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.83 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.83 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	7.44 %
Deltaproteobacteria bacterium GWA2_54_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	5.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.65 %
Cyanobacteria bacterium UBA9971	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA9971	0.83 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.83 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	0.83 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	7.44 %
Deltaproteobacteria bacterium GWA2_54_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	5.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.65 %
Geomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas	0.83 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	0.83 %
Cyanobacteria bacterium UBA9971	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA9971	0.83 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	7.44 %
Deltaproteobacteria bacterium GWA2_54_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	5.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.65 %
Oscillospiraceae bacterium CM	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium CM	0.83 %
unclassified Geomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas → unclassified Geomonas	0.83 %
Cyanobacteria bacterium UBA9971	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA9971	0.83 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
candidate division Zixibacteria bacterium RBG_16_53_22	species	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	7.44 %
Deltaproteobacteria bacterium GWA2_54_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	5.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.65 %
Geomonas sp. Red32	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas → unclassified Geomonas → Geomonas sp. Red32	0.83 %
Oscillospiraceae bacterium CM	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium CM	0.83 %
Cyanobacteria bacterium UBA9971	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA9971	0.83 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_100333105	Not Available	676	Open in IMG/M
3300003994\|Ga0055435_10071155	Not Available	877	Open in IMG/M
3300005204\|Ga0068997_10062051	Not Available	743	Open in IMG/M
3300005213\|Ga0068998_10034914	Not Available	928	Open in IMG/M
3300006224\|Ga0079037_101062008	Not Available	803	Open in IMG/M
3300006224\|Ga0079037_102389398	Not Available	527	Open in IMG/M
3300006930\|Ga0079303_10027423	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300009029\|Ga0066793_10367148	Not Available	828	Open in IMG/M
3300009053\|Ga0105095_10270447	Not Available	933	Open in IMG/M
3300009087\|Ga0105107_10518669	Not Available	830	Open in IMG/M
3300009091\|Ga0102851_10350577	Not Available	1466	Open in IMG/M
3300009091\|Ga0102851_10596552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1153	Open in IMG/M
3300009091\|Ga0102851_11087574	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	874	Open in IMG/M
3300009091\|Ga0102851_11304148	Not Available	803	Open in IMG/M
3300009111\|Ga0115026_11129783	Not Available	634	Open in IMG/M
3300009111\|Ga0115026_11844830	Not Available	513	Open in IMG/M
3300009131\|Ga0115027_10108319	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300009131\|Ga0115027_10708301	Not Available	756	Open in IMG/M
3300009166\|Ga0105100_10046415	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2521	Open in IMG/M
3300009167\|Ga0113563_10190431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geomonas → unclassified Geomonas → Geomonas sp. Red32	2027	Open in IMG/M
3300009167\|Ga0113563_10459494	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300009167\|Ga0113563_10566111	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1252	Open in IMG/M
3300009179\|Ga0115028_10762290	Not Available	748	Open in IMG/M
3300011402\|Ga0137356_1021291	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300011427\|Ga0137448_1037329	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300011435\|Ga0137426_1001076	All Organisms → cellular organisms → Bacteria → Proteobacteria	6017	Open in IMG/M
3300012157\|Ga0137353_1059305	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300012157\|Ga0137353_1095820	Not Available	553	Open in IMG/M
3300012161\|Ga0137336_1050380	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300012166\|Ga0137350_1001487	All Organisms → cellular organisms → Bacteria	3747	Open in IMG/M
3300012168\|Ga0137357_1085517	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012172\|Ga0137320_1144592	Not Available	504	Open in IMG/M
3300012175\|Ga0137321_1008181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1998	Open in IMG/M
3300012228\|Ga0137459_1005146	All Organisms → cellular organisms → Bacteria	3690	Open in IMG/M
3300014271\|Ga0075326_1018768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	1693	Open in IMG/M
3300014321\|Ga0075353_1024561	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1117	Open in IMG/M
3300014324\|Ga0075352_1021464	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	1352	Open in IMG/M
3300014861\|Ga0180061_1007693	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300014864\|Ga0180068_1092665	Not Available	507	Open in IMG/M
3300014865\|Ga0180078_1038114	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	779	Open in IMG/M
3300014872\|Ga0180087_1099890	Not Available	556	Open in IMG/M
3300014872\|Ga0180087_1117140	Not Available	509	Open in IMG/M
3300014874\|Ga0180084_1097150	Not Available	614	Open in IMG/M
3300014875\|Ga0180083_1036814	Not Available	977	Open in IMG/M
3300014877\|Ga0180074_1099747	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300014883\|Ga0180086_1024409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1369	Open in IMG/M
3300014883\|Ga0180086_1046727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1035	Open in IMG/M
3300014884\|Ga0180104_1015836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	1817	Open in IMG/M
3300014884\|Ga0180104_1205788	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300014884\|Ga0180104_1234151	Not Available	547	Open in IMG/M
3300014885\|Ga0180063_1146938	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014885\|Ga0180063_1188188	Not Available	662	Open in IMG/M
3300015253\|Ga0180081_1080598	Not Available	586	Open in IMG/M
3300015255\|Ga0180077_1095230	Not Available	625	Open in IMG/M
3300015258\|Ga0180093_1025617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1240	Open in IMG/M
3300015259\|Ga0180085_1051580	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300015259\|Ga0180085_1265041	Not Available	502	Open in IMG/M
3300018059\|Ga0184615_10009781	All Organisms → cellular organisms → Bacteria → Proteobacteria	5208	Open in IMG/M
3300018084\|Ga0184629_10041453	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300019208\|Ga0180110_1000135	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300019208\|Ga0180110_1128518	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300019212\|Ga0180106_1019715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	744	Open in IMG/M
3300019228\|Ga0180119_1124528	Not Available	1236	Open in IMG/M
3300019229\|Ga0180116_1107455	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300019229\|Ga0180116_1224177	Not Available	596	Open in IMG/M
3300019229\|Ga0180116_1258754	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	723	Open in IMG/M
3300019229\|Ga0180116_1321121	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300019232\|Ga0180114_1184555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	735	Open in IMG/M
3300019238\|Ga0180112_1244879	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300019248\|Ga0180117_1000115	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300019248\|Ga0180117_1072808	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300019257\|Ga0180115_1015708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	711	Open in IMG/M
3300019257\|Ga0180115_1145204	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300019257\|Ga0180115_1303748	Not Available	515	Open in IMG/M
3300020063\|Ga0180118_1204805	Not Available	700	Open in IMG/M
3300020063\|Ga0180118_1401156	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300020065\|Ga0180113_1253555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium GWA2_54_12	768	Open in IMG/M
3300020065\|Ga0180113_1350238	Not Available	622	Open in IMG/M
3300020065\|Ga0180113_1358295	Not Available	711	Open in IMG/M
3300020066\|Ga0180108_1192153	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300020067\|Ga0180109_1129568	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300020068\|Ga0184649_1128191	Not Available	653	Open in IMG/M
3300020068\|Ga0184649_1293008	Not Available	564	Open in IMG/M
3300024056\|Ga0124853_1076915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium CM	1419	Open in IMG/M
3300027715\|Ga0208665_10013341	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	2066	Open in IMG/M
3300027715\|Ga0208665_10069258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA9971	1056	Open in IMG/M
3300027731\|Ga0209592_1142179	Not Available	863	Open in IMG/M
3300027871\|Ga0209397_10169142	Not Available	985	Open in IMG/M
3300027890\|Ga0209496_10656134	Not Available	571	Open in IMG/M
3300027890\|Ga0209496_10693153	Not Available	557	Open in IMG/M
3300031949\|Ga0214473_10368012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1628	Open in IMG/M
3300033406\|Ga0316604_10019233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	3581	Open in IMG/M
3300033406\|Ga0316604_10187954	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300033408\|Ga0316605_10446326	Not Available	1179	Open in IMG/M
3300033408\|Ga0316605_10698830	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300033408\|Ga0316605_10971195	Not Available	814	Open in IMG/M
3300033408\|Ga0316605_11523000	Not Available	649	Open in IMG/M
3300033413\|Ga0316603_10171648	Not Available	1818	Open in IMG/M
3300033413\|Ga0316603_11549116	Not Available	628	Open in IMG/M
3300033414\|Ga0316619_10381828	Not Available	1109	Open in IMG/M
3300033414\|Ga0316619_11383821	Not Available	627	Open in IMG/M
3300033416\|Ga0316622_101311110	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	846	Open in IMG/M
3300033416\|Ga0316622_101723352	Not Available	730	Open in IMG/M
3300033419\|Ga0316601_100181763	Not Available	1824	Open in IMG/M
3300033419\|Ga0316601_102465019	Not Available	523	Open in IMG/M
3300033434\|Ga0316613_10130663	Not Available	1566	Open in IMG/M
3300033434\|Ga0316613_10353879	Not Available	980	Open in IMG/M
3300033480\|Ga0316620_10491309	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300033483\|Ga0316629_10982275	Not Available	662	Open in IMG/M
3300033483\|Ga0316629_11659915	Not Available	525	Open in IMG/M
3300033485\|Ga0316626_10718162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	871	Open in IMG/M
3300033485\|Ga0316626_11663862	Not Available	576	Open in IMG/M
3300033487\|Ga0316630_10802626	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	807	Open in IMG/M
3300033488\|Ga0316621_11182945	Not Available	577	Open in IMG/M
3300033493\|Ga0316631_10522582	Not Available	502	Open in IMG/M
3300033513\|Ga0316628_100244839	All Organisms → cellular organisms → Bacteria → FCB group → candidate division Zixibacteria → unclassified candidate division Zixibacteria → candidate division Zixibacteria bacterium RBG_16_53_22	2191	Open in IMG/M
3300033521\|Ga0316616_104668300	Not Available	515	Open in IMG/M
3300033557\|Ga0316617_100454870	Not Available	1148	Open in IMG/M
3300033557\|Ga0316617_101451395	Not Available	690	Open in IMG/M
3300033557\|Ga0316617_102840478	Not Available	505	Open in IMG/M
3300034165\|Ga0364942_0284370	Not Available	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	68.59%
Terrestrial	Environmental → Terrestrial	31.41%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	38.02%
Soil	Environmental → Terrestrial → Soil	28.10%
Sediment	Environmental → Aquatic → Sediment	27.27%
Marine	Environmental → Aquatic → Marine	3.31%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.48%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	29.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	27.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.26%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.31%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	29.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	27.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	26.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.26%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.48%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	25.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	23.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	19.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	8.26%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	6.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.31%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300012157	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012168	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014864	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231A'_16_10D	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014883	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015255	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10D	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015259	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10D	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1003331051	3300001213	Wetland	IGFGIAQAAGMHSEQPVLSFVDQEVTRVANSSAEEKQLAAEGKEFVPEGNWAGTDWQGREPVETGAIPAPVLEESWMQDYGND*
Ga0055435_100711552	3300003994	Natural And Restored Wetlands	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND*
Ga0068997_100620512	3300005204	Natural And Restored Wetlands	MKTSMVGIVSAAILMILASVGFGIAQAAGTHYEQPVLSFEDQEATQVATSAPDDMKLMSAGREFVPEDNWSGTDWHTRGPVDTGAIPEAAFEESWMKDYGND*
Ga0068998_100349141	3300005213	Natural And Restored Wetlands	MKTSMVGIVSAAILMILASVGFGIAQAAGTHYEQPVLSFEDQEATQVATSAPDDMKLMSAGREFVPEDNWSGTDWQTRGPVDTGAIPEAAFEESWMKDYGND*
Ga0079037_1010620081	3300006224	Freshwater Wetlands	MKTSTIGTVSAAILTVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVESHSLDRLGPT
Ga0079037_1023893981	3300006224	Freshwater Wetlands	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEGQEATQAATSIADDMRVASADQEFVPEDNFSSTDWQARGPAETGAIPGVVFEGSWMKEYGND*
Ga0079303_100274231	3300006930	Deep Subsurface	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND*
Ga0066793_103671481	3300009029	Prmafrost Soil	MKTSNIGMVAVAILLVLTGIGFGIAQAGGDQLDNRAWTLEKWISEYPNDEAATLAADDIQLSSADQEFVPEDNWSGTDWQTRGPVETRAIPGAAVEESWMKDYGND*
Ga0105095_102704471	3300009053	Freshwater Sediment	MKISNLGMVAVAILLLLTGIGFGIAQAGGTHSEQPVVSFEDQEIPQVAKSPADDMQLTSAGQEFIPEDNWSGTDWQTAGPVETGAIPGAVFEESWMKDYGND*
Ga0105107_105186692	3300009087	Freshwater Sediment	MRGRKMKTYTVGSVSAAILMVVAGVGVGIAQAEGEIPQAANSSASDMRLTSTGHEFVPEDNYSGTDWQTRGPVETGAIPGAAIEESWMKDYGND*
Ga0102851_103505772	3300009091	Freshwater Wetlands	MKTSTIGTVSAAILTVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVESHSLDRLGPTMEIDGVTYHYNIDTP*
Ga0102851_105965521	3300009091	Freshwater Wetlands	MKTSTIWIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEETWMKDYGND*
Ga0102851_110875741	3300009091	Freshwater Wetlands	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND*
Ga0102851_113041481	3300009091	Freshwater Wetlands	MKTSTIGIVSAAFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQAATSAADDIQLSSANQEFVPEDNWSGTDWQTRGPVETGGIPGAAVEESWMKDYGND*
Ga0115026_111297831	3300009111	Wetland	MEGKKMKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGTGAIPEAAFEESWIKDYGND*
Ga0115026_118448301	3300009111	Wetland	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEETWMKDYGND*
Ga0115027_101083191	3300009131	Wetland	PIEGGEKMKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEGQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND*
Ga0115027_107083012	3300009131	Wetland	MEGKKMKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGTGAIPEAALEESWMKDYGND*
Ga0105100_100464153	3300009166	Freshwater Sediment	MKTSNVGIVAVAILLGLTGIGFGIAQAAGTHSEQPVLSFEDQEATQGASSSAEGMQLASGDQEFVPEGNWSGTDWQARGPVETGAIPVTGPEESWMKDYGND*
Ga0113563_101904311	3300009167	Freshwater Wetlands	MKTSTIGIVSAAFLMVVVGVGFGIAQAGGNLLDNRAWTLEKWISEYPNDEVAKSAAGDIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0113563_104594942	3300009167	Freshwater Wetlands	MKTSTIGIVSAAVLMVVAGVGFGIAQAAGIHSDQPVLSFEDQEAAQAATSATDDIQLASTGKEFVPEDNYSGTDWQMREPVETGAIPGAAVEESWMKDYGND*
Ga0113563_105661113	3300009167	Freshwater Wetlands	MKTSTVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDTRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND*
Ga0115028_107622901	3300009179	Wetland	MKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGTGAIPEAALEESWMKDYGND*
Ga0137356_10212912	3300011402	Soil	MKTSTIGIVSVAVLMVVAGVGFGIAQATGIHSEQPVLSFEDQEAAQVATSAADDIQLSSSGQEFVPEDNWSGIDWQARGPVETGAVPGAAVEESWMKDYGND*
Ga0137448_10373291	3300011427	Soil	MKTSKVGAVAVAILLVVAGIGFGIAQAAGTHTEQPVLSFEDQEAIQIAISPTDDMQLASYGEEFVPEGNWSGSDWQTRGPVETGAIPVTVFEDHWMKDYGND*
Ga0137426_10010761	3300011435	Soil	MKTSTIGIVSVAVLMVVAGVGFGIAQATGIHSEQPVLSFEDQEAAQVATSAADDIQLSSSGQEFVPEDNWSGIDWQARGPVETGAVRVAAVEESWMKDYGND*
Ga0137353_10593051	3300012157	Soil	MKTSTIGIVSVAILMVVAGVGSGIAQATGIHSEQPVLSFEDQEAAQVATSAADDIQLSSSGQEFVPEDNWSGIDWQARGPVETGAVPGAAVEESWMKDYGND*
Ga0137353_10958202	3300012157	Soil	MKSSTIGIVSAAILMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGKD*
Ga0137336_10503801	3300012161	Soil	MKTSTVGIVAALFLMIVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQAATSGEDDIQLSSAGQDFVPEDNWSGSDWQTRGPVETGASPGATVEESWMKDYGSD*
Ga0137350_10014875	3300012166	Soil	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSSGQEFVPEDNWSGIDWQARGPVETGAVPGAAVEESWMKDYGND*
Ga0137357_10855172	3300012168	Soil	MVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVATSSADDIQLSSAGQDFVPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0137320_11445921	3300012172	Soil	MVVTGVGFGIAQATGIHSEQPVLSFEDQEAAQVATSAADAIQLSSAGQDFVPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0137321_10081812	3300012175	Soil	MKTSTVGIVAALFLMFVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVATSAADDIQLSSAGQDFVPEDNWSGSDWQTRGPVETGAIPGAA
Ga0137459_10051463	3300012228	Soil	MKTTTIGIVAATCFMVVAGVGFGIAQATGTHSEQPVSRFEDQEAAQVATSAADDIQLSSAGKEFVPEDNWSGTDWQARGPVETGAIPGAAVEESWMKDYGND*
Ga0075326_10187683	3300014271	Natural And Restored Wetlands	MKSSTVGIVAALFLIVVAGVGFGIAQAGGTHSEQPVLRFEDQGATQVAPSAADGIQLASTDQELVPEDNYSGTDWQMREPVETGAIPGAAVEASWMKEYGND*
Ga0075353_10245611	3300014321	Natural And Restored Wetlands	MKTSMVGVVSAAILMILASVGFGIAQAAGTHYEQPVLSFEDQEATQVATSAPDDMKRTSAGQEFVPEENWSGTDWQTRGPVDTGAIPEAAFEESWMKDYGND*
Ga0075352_10214642	3300014324	Natural And Restored Wetlands	MKTSMVGVVSAAILMILASVGFGIAQAAGTHYEQPVLSFEDQEATQVATSAPDDMKLMSAGREFVPEDNWSGTDWQTRGPVDTGAIPEAAFEESWMKDYGND*
Ga0180061_10076932	3300014861	Soil	MKTSTVGIVAALFLMFVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVATSAADDIQLSSAGKDFVPEDNWSGIDWQARGPVETGAVPGAAVEESWMKDYGSD*
Ga0180068_10926651	3300014864	Soil	DKMKTSTIGIVSAAILMVVAGVGSGTAQATGIHSEQPVLSFEDQEATQLETSAADDIQLSSSGQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0180078_10381142	3300014865	Soil	WGRRGGKVKTSTVGIVAALFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSLANDIQLASAGKEFVPEDNWSGTDWQARGPVETGAIPGAAVEESWMKDYGND*
Ga0180087_10998901	3300014872	Soil	MKTSTVGIVAALFLMIVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQAATSGADDIQLSSAGQDFVPEDNWSGSDWQTRGPVETGAIPGATVEESWMKDYGSD*
Ga0180087_11171401	3300014872	Soil	MKISTIGIVSAVILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADGIQLASAAQEFVPEGNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0180084_10971502	3300014874	Soil	MDPGDSAWGRRGDKMKTSTIGIVAAAFLMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADDIQLASAGKEFVPEDNWSGTDWQARGPVETGAIPGVAVEESWMKDYGND
Ga0180083_10368141	3300014875	Soil	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAAKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0180074_10997471	3300014877	Soil	KTSTIGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQVATSAADDIQLSSSGQEFVPEDNWSGTDWQMRGPVETGAIPGAAVEESWMKDYGND*
Ga0180086_10244093	3300014883	Soil	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQMATSAADDIQLSSAAKEFVPEDNWSGTDWQTRGPVEAGAIPGAAVEESWMKDYGND*
Ga0180086_10467271	3300014883	Soil	MKTSTIGIVAAAFLMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADGILLASTDQEFVPEDNYSGTDWQMREPVETGAIPGAAVEESWMKDYGND*
Ga0180104_10158361	3300014884	Soil	MKTSTVGIVAALFLMVVAGVGFGIAQAAGTHSEQPVLNFEDQEGAQAATSAADDIQLSSANQEFVPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKEYGND*
Ga0180104_12057882	3300014884	Soil	DKMKTSSVGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQAATSAADDIQLASTGQVFVPEDNYSGTDWQMREPVGTGAIPGAAVEESWMKDYGND*
Ga0180104_12341512	3300014884	Soil	LLVVTGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSSANDIQLASADQEFVPEDNWSGTDWQTRGPVETGAIPGAVFEESWMNDYGND*
Ga0180063_11469381	3300014885	Soil	MKTSSVGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQAATSAAGDIQLASTGQEFVPEDNYSGTDWQMREPVGTGAIPGAAVEESWMKDYGND*
Ga0180063_11881881	3300014885	Soil	MKISTIGIVSAAILMVVAGVGFGIAQAGGDQLDNRAWSLEKWISDYPNDEVAMSAADGIQLASADQEFIPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0180081_10805981	3300015253	Soil	MKNSTVGIVSAAFLMVVVGVGFGIEQAGGDQLDNRAWTLEKWISEYPNDEVATSATDGIQLASADQEFAPEDNWSGTDWQTRGPVETGVIPGAAVEESWMKDYGND*
Ga0180077_10952301	3300015255	Soil	MKTSTIGIVSVAILMVVAGVGSGIAQPTGIHSDQPVLSFEDQEATQMATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND*
Ga0180093_10256171	3300015258	Soil	MKTSTVGIVAAVFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVATSAADDIQLSSSGQEFVPEDNWSGIDWQARGPVETGAVPGAAVEESWMKDYGND*
Ga0180085_10515802	3300015259	Soil	MKTSSVGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQAATSAAGDIQLASTGQEFVPEDNWSGSDWQTRGPVETGAVPGAAVEESWMKDYGND*
Ga0180085_12650411	3300015259	Soil	MKTSTIGIVAAAFLMVVAGVGFGIAQAGGDQLDNRAGTLEKWISEYPNDEVATSEADGIQLASTDQEFIPEDNYSGTDWQMREPVESGAIPGAAVEESWMKDYGND*
Ga0184615_100097813	3300018059	Groundwater Sediment	MKTSKVGVVAVAVLLVVSGIGFGIAQAAGTHTEQPVLSFEDQEATQVAISPTDDMQLASYGEEFIPEDNWSGTDWQTRGPVETGAIPETAFGEHWMKDYGND
Ga0184629_100414532	3300018084	Groundwater Sediment	MKTSTVGIVSAAILMVVAGVGFGIAQAGEPQTIGESMEWQSPQAAKSPADDMQLTSAGQEFVPEDNWSGTDWQTRGPVETGAIPGAVFEESWMKDYGND
Ga0180110_10001351	3300019208	Groundwater Sediment	MKTSTVGIVAAAILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYSNDEVATSAADDIQLASAGQEFVPEDNWSGTDWQARGPVETGAIPGAAVEESWMKDYGND
Ga0180110_11285181	3300019208	Groundwater Sediment	MKTSTIGIVAATCFMVVAGVGFGIAQATGTHSEQPVSRFEDQVAAQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180106_10197152	3300019212	Groundwater Sediment	MKTSTIGIVAATFFLVVAGVGFGIAHAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGQEFVPEDNWSGTDWQARGPVETGAIPGAAVEESWMKDYGND
Ga0180119_11245281	3300019228	Groundwater Sediment	MKISTIGIVSAVILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADGIQLASAAQEFVPEGNWSGTDWQTRGPVETGAIPGAAVEESWMKDY
Ga0180116_11074551	3300019229	Groundwater Sediment	RKGDKMKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180116_12241771	3300019229	Groundwater Sediment	MKTSTVGIVATVFLMVVAGVGFGIAQATGTHSEQPVLSFEDQEATQVATSAADDIQLSSSGQEFVPEDNWSGTDWQARGPVETGAIPGGAVEESWMKDYGND
Ga0180116_12587542	3300019229	Groundwater Sediment	GVGFGIAQAAGTHSEQPVLSFEDQEAAQVASSAADDIQLSSAGQDFIPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180116_13211211	3300019229	Groundwater Sediment	RKGDKMKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQESTQVATSAADDIQLSSAAKEFVPEDNWSGTDWQTRGPVEAGAIPGAAVEESWMKDYGND
Ga0180114_11845551	3300019232	Groundwater Sediment	PTDPGDSSWGRRGDKMKTSTIGIVSAAILMVVAGVGSGIAQATGIHSEQPVLSFEDQEAAQVATSAVDDIQLSSAGQDFVPEDNWSGSDWQGRGPVETGAVPGAAVEESWMKDYGND
Ga0180112_12448791	3300019238	Groundwater Sediment	VGFGIAQAAGTHSEQPVLSFEDQEAAQVASSAADDIQLSSAGQDFIPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180117_10001152	3300019248	Groundwater Sediment	MKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180117_10728082	3300019248	Groundwater Sediment	RLILGEGEEKMKISTIGIVSAAILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYSSDEVATSAADGIQLASADQELVPEDNWSGTDWQTRGPVEAGAIPGATVEESWMKDYGND
Ga0180115_10157081	3300019257	Groundwater Sediment	MKTSKVGIVAVAILLVVTGIGFGIAQAGGNHSEQPVLSFEDQEATQMATSAADDIQLSSAGKEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180115_11452041	3300019257	Groundwater Sediment	MKTSTVGIVATVFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVASSAADDIQLSSAGQDFIPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180115_13037481	3300019257	Groundwater Sediment	DPGDSSWGRKGDKMKTSTIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEATQVATSAADDIQLSSAAKEFVPEDNWSGTDWQTRGPVEAGAIPGAAVEESWMKDYGND
Ga0180118_12048052	3300020063	Groundwater Sediment	MKTSTIGIVSAAFLLVVAGVGFGIAQAEGDQLDNRAMTLEKWISEYPNDEVPTSAADDIQLASTDKEFVPEDNYSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180118_14011562	3300020063	Groundwater Sediment	SNLNDGPGRLVLGKEGGKMKTSTIGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQAATSAADDIQLASTGQVFVPEDNYSGTDWQMREPVETGAIPGAAVEESWMKDYGND
Ga0180113_12535551	3300020065	Groundwater Sediment	EGEMKTPNVGIVAVAILLAVTGIGFGIAQAGGTHSEQPVLSFEDQEAAQVASSAADDIQLSSAGQDFIPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180113_13502382	3300020065	Groundwater Sediment	FGIAQAGGDQLDNRAWTLEKWISEYPNDGVATSAADGIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180113_13582953	3300020065	Groundwater Sediment	STIWIVSAAILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADGIQLASAAQEFVPEGNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180108_11921532	3300020066	Groundwater Sediment	MKTSTVGIVAAVFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQVATSAADDIQLSSAGPDFVPEDNWSGSDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0180109_11295682	3300020067	Groundwater Sediment	STIGIVSVAVLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQAATSAADDIQLASAGQDFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMNDYGND
Ga0184649_11281912	3300020068	Groundwater Sediment	MKTSTVGLVLAAILMVVAGVGFGIAQAGGDQLDNRAWTLEKWISEYPNDEVATSAADGILLASTDQEFVPEDYYSGTDWQMREPVETGAIPGAAVEESWMKDYGND
Ga0184649_12930082	3300020068	Groundwater Sediment	MKTSKVGVVAVAVLLVVSGIGFGIAQAAGTHTEQPVLSFEDQEATQVAISPTDDMQLASYGEEFIPEDNWTGTDWQTRGPVETGAIPETAFGEHWMKDYGND
Ga0124853_10769153	3300024056	Freshwater Wetlands	MKTSTVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDTRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0208665_100133412	3300027715	Deep Subsurface	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0208665_100692581	3300027715	Deep Subsurface	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0209592_11421792	3300027731	Freshwater Sediment	MKISNLGMVAVAILLLLTGIGFGIAQAGGTHSEQPVVSFEDQEIPQVAKSPADDMQLTSAGQEFIPEDNWSGTDWQTAGPVETGAIPGAVFEESWMKDYGND
Ga0209397_101691421	3300027871	Wetland	MKTSMVGVVSSAILMILASIGFGIAQAAGTHSEQPVLSFEGQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0209496_106561341	3300027890	Wetland	MKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGTGAIPEAALEESWMKDYGND
Ga0209496_106931531	3300027890	Wetland	IGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0214473_103680123	3300031949	Soil	MKTYNVGIVAVAILLGLTGIGFGIAQAAGTHSEQPVLSFEDQEATQGATSPAEDMQLASGGQEFVPEGNWSGTDWQARGPVETGAIPVTGPEESWMKDYGND
Ga0316604_100192332	3300033406	Soil	MKTSTIGTVSAAILTVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVESHSLDRLGPTMEIDGVTYHYNIDT
Ga0316604_101879542	3300033406	Soil	MKTSTIGIVSAAVLMVVAGVGFGIAQAAGIHSEQPVLSFEDQEAAQAATSAADDIQLASTGQEFVPEDNYSGTDWQMREPVETGAIPGAAVEESWMKDYGND
Ga0316605_104463262	3300033408	Soil	MKTSTIGIVSAAFLMVVVGVGFGIAQAGGDLLDNRAWTLEKWISEYPNDEVATSAAGDIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316605_106988301	3300033408	Soil	MKMPMVGIVAVAILVVVAGIGFGIAQAAGIHSEQPVLSFVDQEATRVANSSAEEKQLAAKGKEFVPEGNWAGTDWQVREPVDTGAIPAPVLEESWMKDYGND
Ga0316605_109711951	3300033408	Soil	MKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGTGAIPEAALAESWMKDYGND
Ga0316605_115230001	3300033408	Soil	MKTATIGIVSAAFLMVVVGVGFGIAQAGGDLLDNRAWTLENWISEYPNDEVATSAADGIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316603_101716482	3300033413	Soil	MKTSTIGIVSAAFLMVVVGVGFGIAQAGGDLLDNRAWTLEKWISEYPNDEVAKSAAGDIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316603_115491162	3300033413	Soil	FLMVVVGVGFGIAQAGGDLLDNRAWTLENWISEYPNDEVATSAADGIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316619_103818281	3300033414	Soil	MKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISRVGNSPADEMVLVSAGQEFVPEDNWSGTDWQTREPVGAGAIPEAALEESWMKDYGND
Ga0316619_113838211	3300033414	Soil	KTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0316622_1013111102	3300033416	Soil	GEKMKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDTRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0316622_1017233521	3300033416	Soil	MKTSTIGTVSAAILVVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVES
Ga0316601_1001817631	3300033419	Soil	MKTSTIGTVSAAILTVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMG
Ga0316601_1024650191	3300033419	Soil	MKTSTIGIVSAAFLMVVAGVGFGIAQAAGTHSEQPVLSFEDQEAAQAATSAADDIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMK
Ga0316613_101306633	3300033434	Soil	MKTSTIGIVSAAFLMVVVGVGFGIAQAGGDLLDNRAWTLEKWISEYPNDEVATSAAGDIRLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316613_103538791	3300033434	Soil	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKGYGND
Ga0316620_104913092	3300033480	Soil	MKTFTVGIISAAILMVVAGVGFGIARAEGTHSEQPVFSFEDQEFPQVASSPADDMQQTSAGKEFVPEDNWSGTDWQTRGPVETGAIPTTDFEEPWMKDYGND
Ga0316629_109822751	3300033483	Soil	MKTSNVGILTVAILLVVTGIGFGIAQAGGTHSEQPVLSFEDQEISQVANSPADEMVMVSAGQEFVPEDNWSGTDWQTREPVGTGAI
Ga0316629_116599152	3300033483	Soil	MKTSTIGTVSAAILTVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVESHSLDRLGPTMEIDGVTYH
Ga0316626_107181622	3300033485	Soil	MKTATIGIVSAAFLMVVVGVGFGIAQAGGDLLDNRAWTLEKWISEYPNDEVATSAAGDIQLSSANQEFVPEDNWSGTDWQTRGPVETGAIPGAAVEESWMKDYGND
Ga0316626_116638622	3300033485	Soil	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSYEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0316630_108026262	3300033487	Soil	ILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0316621_111829452	3300033488	Soil	GGEKMKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKGYGND
Ga0316631_105225822	3300033493	Soil	LMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDTRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0316628_1002448393	3300033513	Soil	MKTSTVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKEYGND
Ga0316616_1046683001	3300033521	Soil	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGN
Ga0316617_1004548701	3300033557	Soil	MKTSMVGVVSAAILMILASIGFGIAQAAGTHSEQPVLRFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEES
Ga0316617_1014513951	3300033557	Soil	AILMILASIGFGIAQAAGTHSEQPVLSFEDQEATQAATSTADDMRVASADQEFVPEDNFSGTDWQARGPAETGAIPGVVFEGSWMKEYGND
Ga0316617_1028404781	3300033557	Soil	MKTSTIGTVSAAILVVVAVVGFGIAQAAGTHSEQPVSSFEDQEATEVATSAADDVKLTSAGQEFVPEGNWSGTDWQTRGPVDTGAMPEMGSGSSVESHSLDRLGPTMEIDGVTYHYNIDT
Ga0364942_0284370_32_340	3300034165	Sediment	MKTSMVGVVSAAILMILASVGFGIAQAAGTHSEQPVLSFEDQEATQAATSAADDMRLASADQEFVPEDNFSGTDWQTRGPVETGAIPGAVFEESWMKDYGND

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072477

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences