Metagenome / Metatranscriptome Family F072468

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072468
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	68 residues
Representative Sequence	FNFMQSQQAGFSGTALAAFGAADSGVPATVVAPSLLFDDVEVHGARGEPERLPLVPPPPMN
Number of Associated Samples	105
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	98.35 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.752 % of family members)
Environment Ontology (ENVO)	Unclassified (31.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.98% β-sheet: 0.00% Coil/Unstructured: 82.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01545	Cation_efflux	28.10
PF01641	SelR	17.36
PF16916	ZT_dimer	7.44
PF01433	Peptidase_M1	6.61
PF05988	DUF899	2.48
PF08240	ADH_N	1.65
PF04909	Amidohydro_2	1.65
PF08327	AHSA1	1.65
PF04255	DUF433	0.83
PF07040	DUF1326	0.83
PF12840	HTH_20	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	28.10
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	28.10
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	28.10
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	17.36
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	6.61
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.48
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.83
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.80 %
Unclassified	root	N/A	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.18 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.40 %
Unclassified	root	N/A	1.65 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.40 %
Unclassified	root	N/A	1.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.83 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.40 %
Unclassified	root	N/A	1.65 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.83 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.65 %
Unclassified	root	N/A	1.65 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.83 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.83 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	17.36 %
Unclassified	root	N/A	1.65 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.83 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.83 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.83 %
Acidobacteria bacterium 13_1_20CM_2_60_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10079785	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300002245\|JGIcombinedJ26739_100751484	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300003352\|JGI26345J50200_1019348	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300004092\|Ga0062389_102738217	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005174\|Ga0066680_10410371	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300005177\|Ga0066690_10274231	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005177\|Ga0066690_11028214	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005454\|Ga0066687_10782755	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005526\|Ga0073909_10472660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	602	Open in IMG/M
3300005541\|Ga0070733_10450530	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005554\|Ga0066661_10476847	All Organisms → cellular organisms → Bacteria → Acidobacteria	758	Open in IMG/M
3300005560\|Ga0066670_10224622	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300005602\|Ga0070762_11140114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_60_10	538	Open in IMG/M
3300005610\|Ga0070763_10718526	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005610\|Ga0070763_10783023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	563	Open in IMG/M
3300006046\|Ga0066652_101645829	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300006162\|Ga0075030_100148079	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300006237\|Ga0097621_100400065	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300006354\|Ga0075021_10316639	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300006954\|Ga0079219_11003737	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300007258\|Ga0099793_10015674	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300007258\|Ga0099793_10048254	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300007265\|Ga0099794_10593168	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009143\|Ga0099792_11217918	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009523\|Ga0116221_1082973	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300009548\|Ga0116107_1115994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300010048\|Ga0126373_12629587	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010159\|Ga0099796_10282975	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300010303\|Ga0134082_10030378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2028	Open in IMG/M
3300010303\|Ga0134082_10255061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300010376\|Ga0126381_102728936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300010376\|Ga0126381_104088441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010379\|Ga0136449_100557938	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300012019\|Ga0120139_1155713	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012096\|Ga0137389_10666870	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300012189\|Ga0137388_10176537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1911	Open in IMG/M
3300012200\|Ga0137382_10962931	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012201\|Ga0137365_11263466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300012202\|Ga0137363_10014438	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5154	Open in IMG/M
3300012202\|Ga0137363_11182239	Not Available	651	Open in IMG/M
3300012205\|Ga0137362_10969607	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300012206\|Ga0137380_10295481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300012207\|Ga0137381_10362098	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300012207\|Ga0137381_11493105	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012209\|Ga0137379_10682964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300012209\|Ga0137379_11811960	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300012209\|Ga0137379_11816068	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300012210\|Ga0137378_10723504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300012211\|Ga0137377_10582533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300012349\|Ga0137387_10189044	All Organisms → cellular organisms → Bacteria → Proteobacteria	1477	Open in IMG/M
3300012351\|Ga0137386_11310710	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012357\|Ga0137384_10397439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300012359\|Ga0137385_10104678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2507	Open in IMG/M
3300012359\|Ga0137385_10443183	All Organisms → cellular organisms → Bacteria → Acidobacteria	1103	Open in IMG/M
3300012361\|Ga0137360_10555775	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012683\|Ga0137398_10252448	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300012685\|Ga0137397_11014441	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012917\|Ga0137395_10522898	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012917\|Ga0137395_10645133	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300012923\|Ga0137359_10130742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2232	Open in IMG/M
3300012923\|Ga0137359_11392349	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300012925\|Ga0137419_11762529	Not Available	529	Open in IMG/M
3300012930\|Ga0137407_10336700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1387	Open in IMG/M
3300014200\|Ga0181526_10816898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	587	Open in IMG/M
3300015241\|Ga0137418_10067421	All Organisms → cellular organisms → Bacteria	3265	Open in IMG/M
3300015359\|Ga0134085_10364210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300016294\|Ga0182041_10099423	All Organisms → cellular organisms → Bacteria	2133	Open in IMG/M
3300017927\|Ga0187824_10193285	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300017942\|Ga0187808_10549838	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300017955\|Ga0187817_10275325	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300017955\|Ga0187817_10706850	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300017972\|Ga0187781_10147667	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300017975\|Ga0187782_11612720	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300018035\|Ga0187875_10458688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300018040\|Ga0187862_10234106	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1188	Open in IMG/M
3300018062\|Ga0187784_10129633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2060	Open in IMG/M
3300018086\|Ga0187769_10025046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3998	Open in IMG/M
3300018088\|Ga0187771_10120668	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300018088\|Ga0187771_10399796	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300018088\|Ga0187771_10798318	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300020199\|Ga0179592_10087546	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300020579\|Ga0210407_10006853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8674	Open in IMG/M
3300020581\|Ga0210399_10030640	All Organisms → cellular organisms → Bacteria	4294	Open in IMG/M
3300020583\|Ga0210401_10297895	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300020583\|Ga0210401_10664253	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300021088\|Ga0210404_10402820	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300021170\|Ga0210400_11001274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300021181\|Ga0210388_11055906	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300021363\|Ga0193699_10280700	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300021474\|Ga0210390_10202744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1677	Open in IMG/M
3300021478\|Ga0210402_10808986	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021559\|Ga0210409_10061650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3503	Open in IMG/M
3300022529\|Ga0242668_1067769	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300025319\|Ga0209520_10165554	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300025916\|Ga0207663_11411654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300026312\|Ga0209153_1052113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1453	Open in IMG/M
3300026361\|Ga0257176_1002846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1777	Open in IMG/M
3300027535\|Ga0209734_1038946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	892	Open in IMG/M
3300027605\|Ga0209329_1055424	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300027663\|Ga0208990_1010622	All Organisms → cellular organisms → Bacteria	3068	Open in IMG/M
3300027667\|Ga0209009_1104604	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300027821\|Ga0209811_10047301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1463	Open in IMG/M
3300027867\|Ga0209167_10368767	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300027894\|Ga0209068_10598897	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300028047\|Ga0209526_10144998	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300028792\|Ga0307504_10129425	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300028906\|Ga0308309_10261252	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300030058\|Ga0302179_10556227	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300031028\|Ga0302180_10429149	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300031231\|Ga0170824_119074408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1729	Open in IMG/M
3300031234\|Ga0302325_13012062	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300031715\|Ga0307476_10274810	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300031764\|Ga0318535_10217565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031778\|Ga0318498_10152467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300031795\|Ga0318557_10400511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300031942\|Ga0310916_10871868	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031962\|Ga0307479_10930013	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300032180\|Ga0307471_101271424	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300032783\|Ga0335079_11910721	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300032828\|Ga0335080_10123056	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300034177\|Ga0364932_0214448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.43%
Aquatic	Environmental → Aquatic	10.74%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.12%
Freshwater	Environmental → Aquatic → Freshwater	8.26%
Sediment	Environmental → Aquatic → Sediment	2.48%
Peat	Environmental → Terrestrial → Peat	2.48%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.59%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.13%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100797851	3300000567	Peatlands Soil	NDQTLFSFAQNQSAGFNGTALQPFGSSEGGVPSTVISPSLLFDEIEVRGPRSEPERLPLVPAPPLD*
JGIcombinedJ26739_1007514842	3300002245	Forest Soil	QNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSAKGSL*
JGI26345J50200_10193482	3300003352	Bog Forest Soil	AGFAGTALSAFGSAQNGLPASVVAPSLLFEELEVRGARGEPKRLPLLPAPQMAVQTAAK*
Ga0062389_1027382172	3300004092	Bog Forest Soil	MLRGFNIRALRAIAGIGNDFTPFQYMQSQQFGFAATALSAFGGAQGGLPTSLVAPSLLFEDVDVRGARGEPRRAPRLPPPALN*
Ga0066680_104103711	3300005174	Soil	ALRNLAGIGNDTFVFNYMQSQINGFAGTALGAFGSAQSQYGLPASVVAPSLLFAELEVRGARGEAKRLPLLPPPPMSPAK*
Ga0066690_102742311	3300005177	Soil	GFAGTALSAFGSAQPGASLPASVVAPSLLFDEVEVRGERAEAKRLALLPPPPMTAAK*
Ga0066690_110282142	3300005177	Soil	DSFVYNYMQTQANGFAGTALSAFGSAQAGLPASVVAPSLLFDEVEVRGERAEAKRLPLLPPPPMTASK*
Ga0066687_107827551	3300005454	Soil	NGFAGTALSAFGSAQPGACLPASLVAPALLFDEVEVRGERGEAKRLPLLPPPPLTASK*
Ga0073909_104726602	3300005526	Surface Soil	QQAGFAGTALAAYGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPQVPAPPMN*
Ga0070733_104505302	3300005541	Surface Soil	ATAFDFMQSQQAGFAGTALAAFGSADSGVPSTVVAPSLLLSDVELHGARGEPERLPLVPPPPIN*
Ga0066661_104768472	3300005554	Soil	VFNYMQSQNTGFVGTALGAFGSAQLGGLPASVVAPSLLFEELEVRGARGEAKRLPLLPPPPLSPAK*
Ga0066670_102246222	3300005560	Soil	GNDDFVFHYMQSQSNGFAGTALSAFGSAQPGASLPASVVAPSLLFDEVEVRGERAEAKRLALLPPPPMTAAK*
Ga0070762_111401142	3300005602	Soil	NDNFVYNYMQSQIAGFSGTALGAYGSAQGGLPASVVAPSLLFEELEVRGARGEPKRLPLLPAPSLSAAK*
Ga0070763_107185262	3300005610	Soil	GSDPALFSFAQNQIEGFGGTALAAFGSADGGVPSAVVAPSLLFDDVEVHGPRGEPERMPLVSPPPLD*
Ga0070763_107830231	3300005610	Soil	IAGFSGTALGAFGAASGNGGLPASMVAPSLLFEELEVRGARGEPKRLPLLPAPPLNAAK*
Ga0066652_1016458291	3300006046	Soil	YMQSQANGFAGTALSAFGSAQVGLPASVVAPSLLFDEVEVRGERGEAKRLPLLPPPPMTASK*
Ga0075030_1001480791	3300006162	Watersheds	FMQSQQAGFSGTALAAFGSADAGVPATVIAPSLLFEDVEVHGARGEPERLPLVPPPPMN*
Ga0097621_1004000651	3300006237	Miscanthus Rhizosphere	TRVLRNVTAIGNDPYVFNYMQTQVAGFAGTALGTFGSAQNGLPSSVVAPSLLFEELDVRGARGEPKRPPLLPAPALTAK*
Ga0075021_103166391	3300006354	Watersheds	FDFMQSQQAGFAGTALAAFGSSDSGVPSTVVAPSLLLEDVEVHGARGEPERLPLVPPPPIN*
Ga0079219_110037371	3300006954	Agricultural Soil	QSQANGFAGTALSAFGSAQVGLPASVVAPSLLFEEVEVRGERGEAKRLPLLPPPPMTASK
Ga0099793_100156743	3300007258	Vadose Zone Soil	RAIRNIAGVGSDATPFNFTQSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0099793_100482544	3300007258	Vadose Zone Soil	QSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0099794_105931682	3300007265	Vadose Zone Soil	IAGVGSDATPFNFTQSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0099792_112179181	3300009143	Vadose Zone Soil	GTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0116221_10829732	3300009523	Peatlands Soil	QTLFSFAQNQSAGFNGTALQPFGSSEGGVPSTVISPSLLFDEIEVRGPRSEPERLPLVPAPPLD*
Ga0116107_11159942	3300009548	Peatland	GLNVRALRNIAGIGDDPAAFTYMESQAAGFTGTALGAFGSAQGGGIPATVVAPSLLFDELEVRGARGEPKRLPLLPAPELTARN*
Ga0126373_126295872	3300010048	Tropical Forest Soil	ITGFGPRMLRNIDAIGDDGSVFNYMQNQTQGVAGTALAAFGSAQSGLPASMVAPSLFFEEIDLRGARGEPKRLPLLAEPPMSPQAPAADKGRK*
Ga0099796_102829752	3300010159	Vadose Zone Soil	LRAMRNIAGIGNDATPFNFTESQQTGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPIN*
Ga0134082_100303784	3300010303	Grasslands Soil	SFVFNYMQSQNAGFAGTALAAFGSARSGLPASVVAPSLLFDELEVRGARGEAKRLPLLPPPPMSATK*
Ga0134082_102550612	3300010303	Grasslands Soil	IGRDNFVYNYMQSQANGFAGTALSAFGSAQVGLPASVVAPSLFFEEVEVRGERAEAKRLPLLPPPPMTASK*
Ga0126381_1027289362	3300010376	Tropical Forest Soil	FNYMQNETAGVAGTSLAAFGAAQNGLPAPVVAPSLLFEEVEVRGARGEPKRLPLLPEPPMSASVKGAQ*
Ga0126381_1040884411	3300010376	Tropical Forest Soil	GVAGTSLAAFGAAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSASVKASL*
Ga0136449_1005579382	3300010379	Peatlands Soil	QVVGVSGTALGVFGTAQGGLPASVVGPSLLFEEVEVRGARGEPKRLPLLPEPPMTPRTTN
Ga0120139_11557131	3300012019	Permafrost	LTLRAVRNIAAVGNDATPFDFMQSQQAGFAGTALAAFGSADSGVPSTAIAPSLLLNDVEVRGARGEPERLPLVPPPPIN*
Ga0137389_106668702	3300012096	Vadose Zone Soil	SRALRNLAGIGNDNFVFDYMQSQDNGFAGTALAAFGSARLGLPASVVAPSLLFEELEVRGARGEAKRLPLLPPPPMSSAK*
Ga0137388_101765374	3300012189	Vadose Zone Soil	SMRNIAGIGSDSTPFNFTQSQQAGFAGTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137382_109629311	3300012200	Vadose Zone Soil	QAGFAGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137365_112634662	3300012201	Vadose Zone Soil	VQSQGNFAGTAFSAFGSAQVGLPASIVAPSLLFDEVEARGERAEAKRLALLPPPPMTAAK
Ga0137363_100144385	3300012202	Vadose Zone Soil	GNDSFVYNYMQSQADGFAGTALGAFGSAQSQSGLPASLVAPSLLFEELEVRGARGEAKRLPLLPPPPMGVTK*
Ga0137363_111822391	3300012202	Vadose Zone Soil	GIGNDSVVFNYMQNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSARGSL*
Ga0137362_109696072	3300012205	Vadose Zone Soil	FSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGGPERLPLVPPPPMN*
Ga0137380_102954813	3300012206	Vadose Zone Soil	NSTPFNFTQSQQAGFAGTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137381_103620983	3300012207	Vadose Zone Soil	PFNFTQSQQAGFAGTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137381_114931052	3300012207	Vadose Zone Soil	GNDSFVYNYMQSQADGFAGTALGAFGSAQSQSGLPASLVAPSLLFEELEVRGARGEAKRLPLLPPPPMSVTK*
Ga0137379_106829642	3300012209	Vadose Zone Soil	FNHVQSQGNFAGTAFSAFGSAQVGLPASIVAPSLLFDEVEARGERAEAKRLALLPPPPMTAAK*
Ga0137379_118119601	3300012209	Vadose Zone Soil	VYNYMQSQINGFAGTALGAFGSAQNQNGLPASVVAPSLLFDELEVRGARGEAKRLPLLPPPPMSPAK*
Ga0137379_118160681	3300012209	Vadose Zone Soil	VYNYMQSQINGFAGTALGAFGSAQNQNGLPASVVAPSLLFEELEVRGARGEAKRLPLLPPPPMSPAK*
Ga0137378_107235041	3300012210	Vadose Zone Soil	SQQAGFAGTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137377_105825333	3300012211	Vadose Zone Soil	IGLNSRALRNLAGIGNDSFVYNYMQSQINGFAGTALGAFGSATSGLGLPASLVAPALLFEELEVRGARGEAKRLPLLPPPPMSATK*
Ga0137387_101890441	3300012349	Vadose Zone Soil	NYMQSQMNGFAGTALGAFGSAQLGGLPASVVAPSLLFEELEVRGARGEAKRLPLLPPPPMSATK*
Ga0137386_113107101	3300012351	Vadose Zone Soil	NDDFVFNHVQSQANGFAGTAFSAFGSAQTGLPAAIVAPSLLFDEVEVRGERAEAKRLALLPPPPMTAAK*
Ga0137384_103974391	3300012357	Vadose Zone Soil	TAFNFMQSQQTGISGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPIN*
Ga0137385_101046783	3300012359	Vadose Zone Soil	NQTAGVAGTALAAFGTAQNGLPASIVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSAKGSL*
Ga0137385_104431831	3300012359	Vadose Zone Soil	YMQSQINGFAGTALGAFGSAQNQNGLPASVVAPSLLFEELEVRGARGEAKRLPLLPPPPMSPAK*
Ga0137360_105557752	3300012361	Vadose Zone Soil	RGAKLAGLTLRAMRNIAGVGSDAAPFNFTQSQQAGFAGTALAAYGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPQVPAPPMN*
Ga0137398_102524481	3300012683	Vadose Zone Soil	IAGVGNDATPFNFTQSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLGPPPPMN*
Ga0137397_110144412	3300012685	Vadose Zone Soil	FNYMQNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSARGSL*
Ga0137395_105228982	3300012917	Vadose Zone Soil	QAGFSGTALAAFGSSDSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137395_106451332	3300012917	Vadose Zone Soil	AGIGNDSFVFNYMQSQDNGFAGTALAAFGSARLGLPASLVAPSLLFDELEVRGARGEAKRLPLLPPPPMSPAR*
Ga0137359_101307421	3300012923	Vadose Zone Soil	SQQAGFAGTALAAYGSADSGVPATVIAPSLLFDDVEVRGARGEPERLPQVPAPPMN*
Ga0137359_113923491	3300012923	Vadose Zone Soil	IGNDSYVFNYMQTQVAGFAGTALGTFGSSQNGLPASVVAPSLLFEELDVRGARGEPKRLPLLPAPALTAK*
Ga0137419_117625291	3300012925	Vadose Zone Soil	FTQSQQAGFAGTALAAFGSADSGVPATVIAPSLLFNDVEVHGARGEPERLPLVPPPPMN*
Ga0137407_103367003	3300012930	Vadose Zone Soil	GNDSAVFNYMQNQTTGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSARGSL*
Ga0181526_108168982	3300014200	Bog	FNFMQSQQAGFSGTALAAFGAADSGVPATVVAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0137418_100674216	3300015241	Vadose Zone Soil	GTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN*
Ga0134085_103642102	3300015359	Grasslands Soil	VYNYMQSQADGFAGTALGAFGSAQSQSGLPASLVAPSLLFEELEVRGARGEAKRLPLLPPPPMGVTK*
Ga0182041_100994232	3300016294	Soil	YNFMENQTQGVAGTALGAFGSAQPSQAGLPASVVAPSLLFEEVEFRGARGEPKRLPLVPEPPMSAAPAR
Ga0187824_101932852	3300017927	Freshwater Sediment	VRAIRNISAVGNDATAFDFMNSQQAGFAGTALAAFGAADSGVPSTVIAPSILLDDVEVRGARGEPERLPLVPPPPIN
Ga0187808_105498381	3300017942	Freshwater Sediment	LNTRALRNLAGIGNDSFVDNYMLSQVTGFVGTSLGAFGSASSGLPASIVAPSLFFEELEVRGARGEAKRLPLMPPPPMSAAR
Ga0187817_102753251	3300017955	Freshwater Sediment	IGNDFTPFQYMQSQQFGFASTALSAFGGAQGGLPTSLVAPSLLFEDVDVRGARGEPRRAPRLTPPALN
Ga0187817_107068502	3300017955	Freshwater Sediment	RSIAAIGNDYTPFNYMQSQQFGFASTALSAFGGAQGGLPTSVVAPSLLFEDVDVRGARGEPRRAPLLAPPPFN
Ga0187781_101476672	3300017972	Tropical Peatland	GNDFTPFNYMQSQQFGFAATALSAFGGAQGGLPTSVVAPSLLFEDVDVRGARGEPRRAPLLAPPPLN
Ga0187782_116127201	3300017975	Tropical Peatland	VYNFMLNETVGVSGTSLGAFGTAQNGLPASSVAPSLLFEEVEVRGARGEPKRLPLLPEPPMTARQGK
Ga0187875_104586881	3300018035	Peatland	MQSQVVGVSGTALGSFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKRLPLIPEPPLNSKANN
Ga0187862_102341062	3300018040	Peatland	AAFTYMESQAAGFTGTALGAFGSAQGGGIPATVVAPSLLFDELEVRGARGEPKRLPLLPAPELTARN
Ga0187784_101296331	3300018062	Tropical Peatland	VAGIGNDFTPFNYMQSQQFGFAATALSAFGGAQGGLPTSVVAPSLLFEDVDVRGARGEPRRAPLLAPPPLN
Ga0187769_100250461	3300018086	Tropical Peatland	IGDDLTLFSFAQNQTAGFSGTALQPFGSSEGGVPSTVVSPSLLFDEIEVRGPRSEPERLPLVPAPPLD
Ga0187771_101206681	3300018088	Tropical Peatland	TLKDLRNLLGIGDDLTLFSFAQNQTAGFSGTALQPFGSSEGGVPSTVVSPSLLFDEIEVRGPRSEPERLPLVPAPPLD
Ga0187771_103997961	3300018088	Tropical Peatland	GIGNDFTPFNYMQSQQFGFAATALSAFGSVQGGLPTAVIAPSLLFEDVEVRGARGEPRRAPLLPPPPLN
Ga0187771_107983182	3300018088	Tropical Peatland	GIGSDSGVFNYMQSQQFGFAGTALSAFGSVQGGLPTSLVAPSLLLEDVDVRGARGEPHRAPLLPPPPFH
Ga0179592_100875462	3300020199	Vadose Zone Soil	AGLTLRAIRNIAGVGNDATPFNFTQSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN
Ga0210407_100068536	3300020579	Soil	GLNTRMLRNLGGIGNDDFVYNYMQSQESGFAGTAFGAFGSARLGLPASLVAPSLLFDDLEVRGARGEPKRLPLLPAPSMTAD
Ga0210399_100306404	3300020581	Soil	DNVVFNYMQNQTAGVAGTALAGFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSAKGSL
Ga0210401_102978953	3300020583	Soil	GVGNDSVVFNYMQNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSAKGSL
Ga0210401_106642531	3300020583	Soil	NYMQSQESGFAGTAFGAFGSARLGLPASLVAPSLLFDDLEVRGARGEPKRLPLLPAPSMTAD
Ga0210404_104028202	3300021088	Soil	IRNIAAVGNDATAFDFMNSQQAGFAGTALAAFGAADSGVPSTVIAPSILLDDVEVRGARGEPERLPLVPPPPIN
Ga0210400_110012742	3300021170	Soil	QSQMNGFAGTALGAFGSAQSQSGLPASMVAPSLLFEELEVRGARGEAKRLPLLPPPPMSATK
Ga0210388_110559062	3300021181	Soil	NYMQSQIAGFSGTALGAFGAASGNGGLPASMVAPSLLFEELEVRGARGEPKRLPLLPAPPLNAAK
Ga0193699_102807001	3300021363	Soil	GTALAAYGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPQVPAPPMN
Ga0210390_102027443	3300021474	Soil	IIGLNTRMLRNLGGIGNDDFVYNYMQSQESGFAGTAFGAFGSARLGLPASLVAPSLLFDDLEVRGARGEPKRLPLLPAPSMTAD
Ga0210402_108089862	3300021478	Soil	AIGNDGAAFNYMQNQTAGVAGTALAAFGTAQNGLPCSVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMTAKGSL
Ga0210409_100616503	3300021559	Soil	IGNDSMAFNYMQNQTAGVSGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMTAKGSL
Ga0242668_10677692	3300022529	Soil	GNDQTAFDYMQSQQAGFAGTALAAFGSADSGVPSTVIAPSILLNDVEVRGARGEPERLPLVPPPPIN
Ga0209520_101655541	3300025319	Soil	ATVFTFMQNQQVGLSGTALAAFGSAQGGLPTSVVAPSLLFDEVEVRGPRGGLRRTPLLPAPSLE
Ga0207663_114116542	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DYFVYNYMQSQIAGFSGTALGAFGAASGNAGLPASMVAPSLLFEELEVRGARGEPKRLPLLPAPPLNAAK
Ga0209153_10521132	3300026312	Soil	GNDSFVFNYMQSQNAGFAGTALAAFGSARSGLPASVVAPSLLFDELEVRGARGEAKRLPLLPPPPMSATK
Ga0257176_10028462	3300026361	Soil	NIAGVGSDATPFNFTQSQQAGFAGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN
Ga0209734_10389463	3300027535	Forest Soil	LSSDATPFNFTQSQRTGFAGTALAAFGTADSGVPATVIAPSLLFDDVEVHGARGE
Ga0209329_10554241	3300027605	Forest Soil	ARISGFGSRMLRNIEGIGNDSAVFNYMQNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFGEVEVRGARGEPKHLPLLPEPPMSAKGSL
Ga0208990_10106223	3300027663	Forest Soil	IRNIAGVGSDATPFNFTQSQRAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN
Ga0209009_11046041	3300027667	Forest Soil	GFAGTALAAFGSADSGVPSTVIAPSLLLNDVEVHGARGEPERLPLVPPPPIQ
Ga0209811_100473011	3300027821	Surface Soil	IGNDPYVFNYMQTQVAGFAGTALGTFGSAQNGLPSSVVAPSLLFEELDVRGARGEPKRPPLLPAPALTAK
Ga0209167_103687671	3300027867	Surface Soil	ATAFDFMQSQQAGFAGTALAAFGSADSGVPSTVVAPSLLLSDVELHGARGEPERLPLVPPPPIN
Ga0209068_105988972	3300027894	Watersheds	LTLRAVRNISAIGNDATAFDFMQSQQAGFAGTALAAFGSSDSGVPSTVVAPSLLLEDVEVHGARGEPERLPLVPPPPIN
Ga0209526_101449982	3300028047	Forest Soil	LSSDATPFNFTQSQRTGFAGTALAAFGTADSGVPATVIAPSLLFDDVEVHGARGEPQHLPLVPPPPMN
Ga0307504_101294252	3300028792	Soil	TAFDFMQSQQAGFAGTALAAFGSADSGVPSTVVAPSLLLNDVEVHGARGEPERLPLVPPPPIQ
Ga0308309_102612521	3300028906	Soil	GTALAAFGSDDGGVPSAVVAPSLLFDDVEVHGPRGEPERMPLVSPPPLD
Ga0302179_105562271	3300030058	Palsa	TLRAMRNIAGIGNDAAAFNFTESQQTGFAGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPIN
Ga0302180_104291491	3300031028	Palsa	QVAGFAGTALAAFGSAQNGLPASVVAPSLLFDELEVRGARGEPKRLPLLDPPQLAQVQ
Ga0170824_1190744081	3300031231	Forest Soil	RNIEAIGNDGAVFNYMQNQTAGVAGTALAAFGTAQNGLPCSVVAPSLLFEEIEVRGARGEPKHLPLLPEPPMTAKGSL
Ga0302325_130120621	3300031234	Palsa	AAFNFTESQQAGFSGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPIN
Ga0307476_102748102	3300031715	Hardwood Forest Soil	HLAGLTVRAIRNIAAIGNDQTAFDYMQSQQAGFAGTALAAFGSADSGVPSTVIAPSILLNDVEVRGARGEPERLPLVPPPPIN
Ga0318535_102175651	3300031764	Soil	IANDDFVFNHVQSQANGFAGTAFSAFGSAQLGLPASIVAPSLLFDEVEIRGERAEAKRLALLPPPPMTAAK
Ga0318498_101524671	3300031778	Soil	VQSQANGFAGTAFSAFGSAQLGLPASIVAPSLLFDEVEIRGERAEAKRLALLPPPPMTAA
Ga0318557_104005111	3300031795	Soil	DDFVFNYMQSQQDGFASTALSTFGSAQVGLPASVVAPSLLFDEVEVRGERAEAKRLPLLPPPPMSAAK
Ga0310916_108718681	3300031942	Soil	TQGVAGTALGAFGSAQPSQAGLPASVVAPSLLFEEVEFRGARGEPKRLPLVPESPMSAAPAR
Ga0307479_109300131	3300031962	Hardwood Forest Soil	DGAVFNYMQNQTAGVAGTALAAFGTAQNGLPASVVAPSLLFEEVEVRGARGEPKHLPLLPEPPMSAKGSL
Ga0307471_1012714241	3300032180	Hardwood Forest Soil	NITQSQKAGFAGTALAAFGSADSGVPATVIAPSLLFDDVEVHGARGEPERLPLVPPPPMN
Ga0335079_119107212	3300032783	Soil	MRGAMLRGLNLRALRAIAGIGNDFAPYNYMQSQQFGFAATALSAFGGAQGGLPTSVVAPSLLFEDVDVRGARGEPRRAPLLPPPPFN
Ga0335080_101230562	3300032828	Soil	QSQQVGFAATALSAFGSVQGGLPTSVVAPSLLFEDVDVRGARGEPRRAPLLPPPPMN
Ga0364932_0214448_508_729	3300034177	Sediment	AGIGNDATVFTYMQSQVTGLAGTALAAFGSAQGGAPTSVVAPSLLFDEVEVRGARGEPKRLPLVPAPQLTAGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072468

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences