Metagenome / Metatranscriptome Family F072449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	80 residues
Representative Sequence	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTP
Number of Associated Samples	114
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.38 %
% of genes near scaffold ends (potentially truncated)	94.21 %
% of genes from short scaffolds (< 2000 bps)	86.78 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.397 % of family members)
Environment Ontology (ENVO)	Unclassified (30.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.843 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.67% β-sheet: 0.00% Coil/Unstructured: 41.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03259	Robl_LC7	60.33
PF00025	Arf	14.05
PF00071	Ras	3.31

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2018	Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family	Signal transduction mechanisms [T]	60.33
COG1100	GTPase SAR1 family domain	General function prediction only [R]	14.05

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	63.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.96 %
Unclassified	root	N/A	4.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	63.64 %
Unclassified	root	N/A	4.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.48 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.83 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	63.64 %
Unclassified	root	N/A	4.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.48 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.13 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.65 %
Lentisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales	0.83 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
unclassified Lentisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → unclassified Lentisphaerales	0.83 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Lentisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → unclassified Lentisphaerales → Lentisphaerales bacterium	0.83 %
Pelobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.65 %
Pelobacter seleniigenes	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter → Pelobacter seleniigenes	0.83 %
Lentisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → unclassified Lentisphaerales → Lentisphaerales bacterium	0.83 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104584288	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300000550\|F24TB_15440240	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	522	Open in IMG/M
3300000881\|JGI10215J12807_1193867	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300000891\|JGI10214J12806_12278720	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300001139\|JGI10220J13317_12061235	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300002121\|C687J26615_10106769	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300002122\|C687J26623_10024768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1583	Open in IMG/M
3300003347\|JGI26128J50194_1005914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	803	Open in IMG/M
3300003349\|JGI26129J50193_1010607	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300003503\|JGI26141J51220_1013407	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300003995\|Ga0055438_10015071	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300004062\|Ga0055500_10065292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300004156\|Ga0062589_100222270	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300004157\|Ga0062590_100539176	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300004281\|Ga0066397_10046984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	765	Open in IMG/M
3300005180\|Ga0066685_10197542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Pelobacter → Pelobacter seleniigenes	1379	Open in IMG/M
3300005280\|Ga0065696_1304891	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	511	Open in IMG/M
3300005290\|Ga0065712_10116807	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1730	Open in IMG/M
3300005406\|Ga0070703_10123647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	942	Open in IMG/M
3300005437\|Ga0070710_11313917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	538	Open in IMG/M
3300005441\|Ga0070700_101014193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	683	Open in IMG/M
3300005445\|Ga0070708_101144197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	728	Open in IMG/M
3300005543\|Ga0070672_100422351	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005921\|Ga0070766_10137170	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1485	Open in IMG/M
3300006049\|Ga0075417_10705179	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006057\|Ga0075026_100108641	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385	Open in IMG/M
3300006237\|Ga0097621_101981969	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006804\|Ga0079221_11299696	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300006806\|Ga0079220_11831385	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	536	Open in IMG/M
3300006880\|Ga0075429_101580749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	570	Open in IMG/M
3300006903\|Ga0075426_10008162	All Organisms → cellular organisms → Bacteria	7471	Open in IMG/M
3300006969\|Ga0075419_10565432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	796	Open in IMG/M
3300009088\|Ga0099830_10848858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	754	Open in IMG/M
3300009098\|Ga0105245_10254118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1708	Open in IMG/M
3300009174\|Ga0105241_10650819	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300009177\|Ga0105248_10092938	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3397	Open in IMG/M
3300009553\|Ga0105249_10590959	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300009553\|Ga0105249_13004613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	542	Open in IMG/M
3300009806\|Ga0105081_1033408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	691	Open in IMG/M
3300010304\|Ga0134088_10194107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	972	Open in IMG/M
3300010358\|Ga0126370_10395397	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300010358\|Ga0126370_11502261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	640	Open in IMG/M
3300010361\|Ga0126378_13215369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300010366\|Ga0126379_12610488	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	603	Open in IMG/M
3300010366\|Ga0126379_13340713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	537	Open in IMG/M
3300010366\|Ga0126379_13358155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	536	Open in IMG/M
3300010371\|Ga0134125_12036889	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	624	Open in IMG/M
3300011120\|Ga0150983_10619621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	600	Open in IMG/M
3300011424\|Ga0137439_1141806	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	554	Open in IMG/M
3300011436\|Ga0137458_1275261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	513	Open in IMG/M
3300011444\|Ga0137463_1114204	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012362\|Ga0137361_10382584	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300012362\|Ga0137361_11176579	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	689	Open in IMG/M
3300012902\|Ga0157291_10377155	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	518	Open in IMG/M
3300012929\|Ga0137404_12207694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	515	Open in IMG/M
3300012955\|Ga0164298_10733097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	698	Open in IMG/M
3300012957\|Ga0164303_10126782	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300012958\|Ga0164299_10440596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	849	Open in IMG/M
3300012960\|Ga0164301_10883450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	692	Open in IMG/M
3300012961\|Ga0164302_11092255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	629	Open in IMG/M
3300012984\|Ga0164309_10628406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	842	Open in IMG/M
3300013307\|Ga0157372_10524968	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300013308\|Ga0157375_10142074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2528	Open in IMG/M
3300014154\|Ga0134075_10436000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	581	Open in IMG/M
3300015170\|Ga0120098_1057451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	562	Open in IMG/M
3300015372\|Ga0132256_103192127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	551	Open in IMG/M
3300015374\|Ga0132255_101971244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	889	Open in IMG/M
3300016319\|Ga0182033_10648869	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300017959\|Ga0187779_10568494	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	756	Open in IMG/M
3300018053\|Ga0184626_10044024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1860	Open in IMG/M
3300019249\|Ga0184648_1073734	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	543	Open in IMG/M
3300019885\|Ga0193747_1009160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2378	Open in IMG/M
3300019997\|Ga0193711_1004321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1767	Open in IMG/M
3300020001\|Ga0193731_1052359	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Lentisphaerales → unclassified Lentisphaerales → Lentisphaerales bacterium	1074	Open in IMG/M
3300020021\|Ga0193726_1118648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1181	Open in IMG/M
3300020062\|Ga0193724_1015780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1603	Open in IMG/M
3300021080\|Ga0210382_10095044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1235	Open in IMG/M
3300021090\|Ga0210377_10447200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	757	Open in IMG/M
3300021178\|Ga0210408_11190351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	582	Open in IMG/M
3300021432\|Ga0210384_11313466	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	628	Open in IMG/M
3300021560\|Ga0126371_11098905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	934	Open in IMG/M
3300022525\|Ga0242656_1004312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1667	Open in IMG/M
3300022726\|Ga0242654_10015292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1783	Open in IMG/M
3300025312\|Ga0209321_10141771	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300025549\|Ga0210094_1086652	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	584	Open in IMG/M
3300025904\|Ga0207647_10197625	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300025918\|Ga0207662_10074356	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2062	Open in IMG/M
3300025922\|Ga0207646_10010797	All Organisms → cellular organisms → Bacteria	8880	Open in IMG/M
3300025922\|Ga0207646_10480582	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300025927\|Ga0207687_10159312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1730	Open in IMG/M
3300025940\|Ga0207691_10260398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1495	Open in IMG/M
3300025944\|Ga0207661_11120489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	724	Open in IMG/M
3300025960\|Ga0207651_10232562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1497	Open in IMG/M
3300025972\|Ga0207668_11817514	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	550	Open in IMG/M
3300026118\|Ga0207675_100475427	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300026351\|Ga0257170_1000794	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300026354\|Ga0257180_1002790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1687	Open in IMG/M
3300026356\|Ga0257150_1063147	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300026374\|Ga0257146_1026391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	943	Open in IMG/M
3300026377\|Ga0257171_1020760	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300026489\|Ga0257160_1034782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	842	Open in IMG/M
3300027187\|Ga0209869_1019037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	772	Open in IMG/M
3300027324\|Ga0209845_1050218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	657	Open in IMG/M
3300027395\|Ga0209996_1001105	All Organisms → cellular organisms → Bacteria	3217	Open in IMG/M
3300027552\|Ga0209982_1001508	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3195	Open in IMG/M
3300027669\|Ga0208981_1035480	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300027671\|Ga0209588_1006500	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3400	Open in IMG/M
3300027875\|Ga0209283_10204206	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300027880\|Ga0209481_10451778	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	661	Open in IMG/M
(restricted) 3300028043\|Ga0233417_10399457	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	633	Open in IMG/M
3300028673\|Ga0257175_1000086	All Organisms → cellular organisms → Bacteria	5057	Open in IMG/M
3300029636\|Ga0222749_10184807	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300029636\|Ga0222749_10326847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	798	Open in IMG/M
3300031421\|Ga0308194_10360066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	520	Open in IMG/M
3300031455\|Ga0307505_10048260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1896	Open in IMG/M
3300031720\|Ga0307469_11778264	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	595	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.21%
Host-Associated	Host-Associated	24.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.46%
Plants	Host-Associated → Plants	24.79%
Aquatic	Environmental → Aquatic	10.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.26%
Sediment	Environmental → Aquatic → Sediment	4.96%
Freshwater	Environmental → Aquatic → Freshwater	3.31%
Marine	Environmental → Aquatic → Marine	2.48%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.28%
Loam	Environmental → Terrestrial → Soil → Loam	14.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.48%
Sand	Environmental → Terrestrial → Soil → Sand	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.48%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.48%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002121	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1	Environmental	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300003347	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003503	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM	Host-Associated	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027187	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028043 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MG	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045842882	3300000364	Soil	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPSSDAGVVAPGTTPVDPVLAAPPGDNGDGR
F24TB_154402401	3300000550	Soil	MPDVNSRASFSDEERHSLVXXXRLCEMIIEANPSDTGALETLKEIYTKLGDRERLGQVMARLATLAGGRPLA
JGI10215J12807_11938671	3300000881	Soil	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADP
JGI10214J12806_122787203	3300000891	Soil	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATA
JGI10220J13317_120612353	3300001139	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVVPTSTRAPA
C687J26615_101067692	3300002121	Soil	MAQTENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTMGGRPSASVAPAPELTAVPAPAPA
C687J26623_100247684	3300002122	Soil	MAQTENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTMGG
JGI26128J50194_10059141	3300003347	Arabidopsis Thaliana Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSAAAG
JGI26129J50193_10106072	3300003349	Arabidopsis Thaliana Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVLATPPGDNGDGRGA
JGI26141J51220_10134072	3300003503	Arabidopsis Thaliana Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVLATPPGDNGDGRGAG
Ga0055438_100150711	3300003995	Natural And Restored Wetlands	MAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEP
Ga0055500_100652921	3300004062	Natural And Restored Wetlands	MAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSAS
Ga0062589_1002222701	3300004156	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEV
Ga0062590_1005391763	3300004157	Soil	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSAS
Ga0066397_100469841	3300004281	Tropical Forest Soil	MAQIENKTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIP
Ga0066685_101975421	3300005180	Soil	MAQASGKASFSAEERQSLMESARLCEMIVEANPSDTGALETLKEIYTKLGDRARLGPVVGRMASLAGGRPAAAGAS
Ga0065696_13048911	3300005280	Switchgrass Rhizosphere Bulk Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTV
Ga0065712_101168071	3300005290	Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPT
Ga0070703_101236473	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPS
Ga0070710_113139172	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0070700_1010141931	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRA
Ga0070708_1011441971	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAQIESKALSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSAS
Ga0070699_1020425711	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTQGSRLTSFSDDERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQIVARLAGLAGGS
Ga0070697_1021385272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MIQHDGPMSPSEDERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLATFAGPSQT
Ga0070672_1004223511	3300005543	Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTST
Ga0070766_101371701	3300005921	Soil	MAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDQENLTRVVARLAGTVGGRPSASVTPPLEPASARPTLPA
Ga0075417_107051792	3300006049	Populus Rhizosphere	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVVTAPAPSPAP
Ga0075026_1001086413	3300006057	Watersheds	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVTAAPIPAVPVPPA
Ga0097621_1019819692	3300006237	Miscanthus Rhizosphere	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEAVAPPIRTAAPVPPATVEMDPGMPG
Ga0079221_112996962	3300006804	Agricultural Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVATPVLDLDAAGS
Ga0079220_118313851	3300006806	Agricultural Soil	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLADRENLARVVARLAGTVGGRPSASITPAAELAAPAP
Ga0075429_1015807491	3300006880	Populus Rhizosphere	MAQIENKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPT
Ga0075426_100081627	3300006903	Populus Rhizosphere	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTP
Ga0075419_105654323	3300006969	Populus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVT
Ga0099830_108488581	3300009088	Vadose Zone Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVAPPIPA
Ga0105245_102541181	3300009098	Miscanthus Rhizosphere	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAP
Ga0105241_106508193	3300009174	Corn Rhizosphere	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPM
Ga0105248_100929385	3300009177	Switchgrass Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVATP
Ga0105249_105909593	3300009553	Switchgrass Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPAPAPVA
Ga0105249_130046131	3300009553	Switchgrass Rhizosphere	MPDVNSKTSFSDEERHSLVESARLCEMIIEANPSDTGALETLKEIYTKLGDRERLGHVMARLATLAGGRPLASGPSTA
Ga0105081_10334081	3300009806	Groundwater Sand	MAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGG
Ga0134088_101941073	3300010304	Grasslands Soil	MAQAGGKASLSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRMASLAGGRPAAAG
Ga0126370_103953971	3300010358	Tropical Forest Soil	MAQSDNKTSLSPDEKRSLSESARLCEMIVEANPSDTGALETLKEIYGKLSDRENLARVVARLAGTVGGRPSASVIASAE
Ga0126370_115022612	3300010358	Tropical Forest Soil	MSPATFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLAGLAAGRPLASGVATGPRPVS
Ga0126378_132153692	3300010361	Tropical Forest Soil	MSDVSSKPSFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLAQVMARLATLPGARPLARGSAAVSRSPQ
Ga0126379_126104882	3300010366	Tropical Forest Soil	MSDVSSKPSFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLAQVMARLATLPGARPLARGS
Ga0126379_133407132	3300010366	Tropical Forest Soil	MAQSDNKTSLSPDEKRSLSESARLCEMIVEANPSDTGALETLKEIYGKLGDRENLARVVARLAGTVGGRPSASVIPSVE
Ga0126379_133581552	3300010366	Tropical Forest Soil	MPDVNSKPSFSDEERHSLVESASLCEMIVEANPSDTGALETLKEIYTKLGDRERLSQVMARLATLAGGRPLASGSAA
Ga0134125_120368891	3300010371	Terrestrial Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRP
Ga0150983_106196213	3300011120	Forest Soil	MAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDHENLTRVVARLAGTVGGRPSASVTPPLEPAP
Ga0137439_11418062	3300011424	Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0137458_12752611	3300011436	Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPMNVGATGR
Ga0137463_11142041	3300011444	Soil	MAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPS
Ga0137361_103825841	3300012362	Vadose Zone Soil	MAQASGKASFSAEERQSLVESAQLCEMIVEANPSDTVTDETLKEIYTKLGDRERLGQVVGRMASLAGGRPAAAG
Ga0137361_111765792	3300012362	Vadose Zone Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGR
Ga0157291_103771551	3300012902	Soil	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIP
Ga0137404_122076941	3300012929	Vadose Zone Soil	MAQASGKASFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRLASLAGGR
Ga0164298_107330971	3300012955	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTPAPAPAPVATPV
Ga0164303_101267821	3300012957	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTRAPAP
Ga0164299_104405963	3300012958	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTRAPAPAPV
Ga0164301_108834502	3300012960	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVVTAPA
Ga0164302_110922552	3300012961	Soil	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPPANSL*
Ga0164309_106284061	3300012984	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPVPEVAAAPIPAAPVPLAPATVELEPGMS
Ga0157378_108351863	3300013297	Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGHVVARLAALAGAGQG
Ga0157372_105249681	3300013307	Corn Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASIIPSAAAGIAPAADPVL
Ga0157375_101420744	3300013308	Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRP
Ga0134075_104360001	3300014154	Grasslands Soil	MAQASGKASFSAEERQSLMESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVGRLASLAGGRPAAAGAS
Ga0120098_10574512	3300015170	Fossill	LAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVVSAPELVAGRSRSSDEMEAL
Ga0132256_1031921272	3300015372	Arabidopsis Rhizosphere	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRGNLSRVVARLAGTVGGRPSASVTP
Ga0132255_1019712443	3300015374	Arabidopsis Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVSTPTPAPAPA
Ga0182033_106488691	3300016319	Soil	MPDVNSKAPFSDEERHSLVESARLCEMIVEANPSDTGALETLKEIYPKLGDRERLSQVRGRLDTLAGGRPL
Ga0187779_105684941	3300017959	Tropical Peatland	MAQIDNKTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYAKLGDRENLGRVVARLAGTVGGRPSASVTPPSEP
Ga0184626_100440241	3300018053	Groundwater Sediment	MAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTV
Ga0184639_103466511	3300018082	Groundwater Sediment	MAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGT
Ga0190273_120659382	3300018920	Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAG
Ga0184648_10737342	3300019249	Groundwater Sediment	MAQIDNKASLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPA
Ga0193747_10091605	3300019885	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAA
Ga0193711_10043214	3300019997	Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVG
Ga0193731_10523593	3300020001	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVPAAAA
Ga0193726_11186483	3300020021	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVPA
Ga0193724_10157804	3300020062	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEPAAAPVP
Ga0210382_100950441	3300021080	Groundwater Sediment	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRPSASVAPAAEHAG
Ga0210377_104472001	3300021090	Groundwater Sediment	MAQTENKTSLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEPAPIAAAAPASPIVELES
Ga0210408_111903512	3300021178	Soil	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVAT
Ga0210384_113134662	3300021432	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAREVAAAPIPAAPAPLPAATVE
Ga0126371_110989053	3300021560	Tropical Forest Soil	MSPATFSDEERQSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVARLGGLAAGRPLASGVATGTRPVSP
Ga0242656_10043121	3300022525	Soil	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEV
Ga0242654_100152924	3300022726	Soil	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVATAPAPPPA
Ga0209321_101417711	3300025312	Soil	MAQKDSKGSMSTEEKHSLEESARLCEMIVEANPSDTGALETLKEIYTKLGDREKLAKIVVRLAGSTGGRPSATV
Ga0210094_10866521	3300025549	Natural And Restored Wetlands	MAPIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAPEPAPGRAPAAEEMEALAASIEVVP
Ga0207647_101976253	3300025904	Corn Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAP
Ga0207662_100743564	3300025918	Switchgrass Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGR
Ga0207646_1001079710	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAQASDKASFSAEERQSLVESARLCEMIVEANPSDTGALETLKEIYTKLGDRERLGQVVRSMASLAGGRPAAAGASIA
Ga0207646_104805823	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPAVVTAPAP
Ga0207687_101593124	3300025927	Miscanthus Rhizosphere	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSA
Ga0207691_102603984	3300025940	Miscanthus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVPTSTRAPA
Ga0207661_111204892	3300025944	Corn Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSA
Ga0207651_102325624	3300025960	Switchgrass Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTAEVST
Ga0207668_118175142	3300025972	Switchgrass Rhizosphere	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRPSAS
Ga0207675_1004754273	3300026118	Switchgrass Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTA
Ga0257170_10007944	3300026351	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGG
Ga0257180_10027901	3300026354	Soil	MAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVA
Ga0257150_10631471	3300026356	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEVAPPIPAVAPISPATVELEPGTPG
Ga0257146_10263913	3300026374	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGGRPSASVTPVPEVAAAPIPAAPA
Ga0257171_10207601	3300026377	Soil	MAQIDNKTSLSSEEKRSLGESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRP
Ga0257160_10347821	3300026489	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLGRVVARLAGTVGGRPSASVTPVPEVAA
Ga0209869_10190372	3300027187	Groundwater Sand	MAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIP
Ga0209845_10502181	3300027324	Groundwater Sand	MAQIESKTLSTEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVIPSDPTPAVAPAPAPAVAELE
Ga0209996_10011051	3300027395	Arabidopsis Thaliana Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSA
Ga0209982_10015084	3300027552	Arabidopsis Thaliana Rhizosphere	MAQIENRTSLSPEEKRSLSESARLCEMIVEANPSDTGALETLKEIYTKLADRDNLARVVARLAGTVGGRPSASVIPSATAGIAPAADPVGIFGSDRPISS
Ga0208981_10354801	3300027669	Forest Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRESLARVVARLAGTVGGRP
Ga0209588_10065001	3300027671	Vadose Zone Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTV
Ga0209283_102042063	3300027875	Vadose Zone Soil	MAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAR
Ga0209481_104517781	3300027880	Populus Rhizosphere	MAQTESKPLSQEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTP
(restricted) Ga0233417_103994571	3300028043	Sediment	MAQIENKTALSSEEKRSLTESARLCEMIVEANPSDTGALETLKEIYGKLGDRENLARVVARLSGTVGGRPSASVAP
Ga0257175_10000865	3300028673	Soil	MAQIDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVAPAREPMTTGAPGRPP
Ga0222749_101848071	3300029636	Soil	MAQIEKTSLSQEEKRSLSESARLCEMIVEANPSDTGALETLKEIYSKLGDQENLTRVVARLAGTVGGRPSASVTPPLEP
Ga0222749_103268472	3300029636	Soil	MAQTESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPTPEVATAPAPP
Ga0308194_103600661	3300031421	Soil	MAQIESKPLSPEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLAGTVGGRPSASVTPAPEP
Ga0307505_100482604	3300031455	Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAPAPEAAPGRAPA
Ga0307469_117782641	3300031720	Hardwood Forest Soil	MAQTDNKTSLSSEEKRSLAESARLCEMIVEANPSDTGALETLKEIYTKLGDRENLARVVARLSGTVGGRPSASVAPAPEAAPGRAPSTEEMETL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters