Metagenome / Metatranscriptome Family F072435

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072435
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	69 residues
Representative Sequence	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTF
Number of Associated Samples	58
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	57.85 %
% of genes near scaffold ends (potentially truncated)	19.83 %
% of genes from short scaffolds (< 2000 bps)	85.95 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.413 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (46.281 % of family members)
Environment Ontology (ENVO)	Unclassified (94.215 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.298 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.49% β-sheet: 4.12% Coil/Unstructured: 79.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03592	Terminase_2	0.83
PF00330	Aconitase	0.83
PF01106	NifU	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0694	Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
All Organisms	root	All Organisms	49.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
Viruses	superkingdom	All Organisms → Viruses	42.98 %
cellular organisms	root	All Organisms → cellular organisms	6.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	40.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.48 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.48 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.48 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.65 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.65 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.65 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
Autographiviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae	1.65 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
Chosvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus	1.65 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
Chosvirus KM23C739	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus → Chosvirus KM23C739	1.65 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	1.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	1.65 %
Chosvirus KM23C739	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus → Chosvirus KM23C739	1.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.41 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	40.50 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2.48 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	1.65 %
Chosvirus KM23C739	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus → Chosvirus KM23C739	1.65 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001731\|JGI24514J20073_1005933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1540	Open in IMG/M
3300001731\|JGI24514J20073_1023856	All Organisms → Viruses → environmental samples → uncultured virus	536	Open in IMG/M
3300001735\|JGI24520J20079_1009218	Not Available	570	Open in IMG/M
3300001743\|JGI24515J20084_1008067	Not Available	959	Open in IMG/M
3300001743\|JGI24515J20084_1016117	All Organisms → Viruses → environmental samples → uncultured virus	671	Open in IMG/M
3300002511\|JGI25131J35506_1003038	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300002511\|JGI25131J35506_1022548	All Organisms → Viruses → environmental samples → uncultured virus	868	Open in IMG/M
3300002511\|JGI25131J35506_1023498	Not Available	849	Open in IMG/M
3300002511\|JGI25131J35506_1032309	Not Available	720	Open in IMG/M
3300002511\|JGI25131J35506_1040811	All Organisms → Viruses → environmental samples → uncultured virus	642	Open in IMG/M
3300002511\|JGI25131J35506_1056926	All Organisms → Viruses → environmental samples → uncultured virus	543	Open in IMG/M
3300002760\|JGI25136J39404_1007843	Not Available	1873	Open in IMG/M
3300002760\|JGI25136J39404_1014390	Not Available	1420	Open in IMG/M
3300002760\|JGI25136J39404_1014886	All Organisms → Viruses → environmental samples → uncultured virus	1397	Open in IMG/M
3300002760\|JGI25136J39404_1019329	Not Available	1232	Open in IMG/M
3300002760\|JGI25136J39404_1060893	All Organisms → Viruses → environmental samples → uncultured virus	702	Open in IMG/M
3300002760\|JGI25136J39404_1090853	All Organisms → Viruses → environmental samples → uncultured virus	574	Open in IMG/M
3300006308\|Ga0068470_1558754	All Organisms → Viruses → environmental samples → uncultured virus	797	Open in IMG/M
3300006310\|Ga0068471_1368463	Not Available	1273	Open in IMG/M
3300006310\|Ga0068471_1429803	Not Available	2291	Open in IMG/M
3300006310\|Ga0068471_1646561	Not Available	1372	Open in IMG/M
3300006310\|Ga0068471_1646679	Not Available	1035	Open in IMG/M
3300006310\|Ga0068471_1646809	Not Available	1533	Open in IMG/M
3300006324\|Ga0068476_1156316	Not Available	952	Open in IMG/M
3300006325\|Ga0068501_1326816	Not Available	799	Open in IMG/M
3300006336\|Ga0068502_1011935	All Organisms → Viruses → environmental samples → uncultured virus	541	Open in IMG/M
3300006336\|Ga0068502_1170030	Not Available	2713	Open in IMG/M
3300006336\|Ga0068502_1239933	All Organisms → cellular organisms → Archaea	1352	Open in IMG/M
3300006340\|Ga0068503_10367420	All Organisms → Viruses → environmental samples → uncultured virus	1885	Open in IMG/M
3300006340\|Ga0068503_10454154	All Organisms → Viruses → environmental samples → uncultured virus	1042	Open in IMG/M
3300006340\|Ga0068503_10518722	Not Available	991	Open in IMG/M
3300006340\|Ga0068503_10778133	Not Available	865	Open in IMG/M
3300006738\|Ga0098035_1101469	Not Available	1002	Open in IMG/M
3300006753\|Ga0098039_1294232	Not Available	543	Open in IMG/M
3300006754\|Ga0098044_1221784	Not Available	739	Open in IMG/M
3300006754\|Ga0098044_1323540	All Organisms → Viruses → environmental samples → uncultured virus	587	Open in IMG/M
3300006789\|Ga0098054_1107471	All Organisms → Viruses → environmental samples → uncultured virus	1043	Open in IMG/M
3300006928\|Ga0098041_1268807	All Organisms → Viruses → environmental samples → uncultured virus	543	Open in IMG/M
3300007758\|Ga0105668_1115071	Not Available	764	Open in IMG/M
3300008050\|Ga0098052_1026682	Not Available	2672	Open in IMG/M
3300008050\|Ga0098052_1285124	Not Available	626	Open in IMG/M
3300008050\|Ga0098052_1310965	Not Available	594	Open in IMG/M
3300008050\|Ga0098052_1401457	All Organisms → Viruses → environmental samples → uncultured virus	509	Open in IMG/M
3300008216\|Ga0114898_1005364	Not Available	5679	Open in IMG/M
3300008216\|Ga0114898_1038386	Not Available	1570	Open in IMG/M
3300008216\|Ga0114898_1074270	Not Available	1046	Open in IMG/M
3300008217\|Ga0114899_1124850	All Organisms → Viruses → environmental samples → uncultured virus	852	Open in IMG/M
3300008217\|Ga0114899_1129810	Not Available	831	Open in IMG/M
3300008217\|Ga0114899_1284136	All Organisms → Viruses → environmental samples → uncultured virus	501	Open in IMG/M
3300008219\|Ga0114905_1102198	All Organisms → Viruses → environmental samples → uncultured virus	993	Open in IMG/M
3300008219\|Ga0114905_1134949	Not Available	833	Open in IMG/M
3300008219\|Ga0114905_1258407	All Organisms → Viruses → environmental samples → uncultured virus	546	Open in IMG/M
3300009409\|Ga0114993_11135529	All Organisms → Viruses → environmental samples → uncultured virus	552	Open in IMG/M
3300009412\|Ga0114903_1043809	All Organisms → Viruses → environmental samples → uncultured virus	1066	Open in IMG/M
3300009412\|Ga0114903_1145432	All Organisms → Viruses → environmental samples → uncultured virus	518	Open in IMG/M
3300009413\|Ga0114902_1158306	Not Available	569	Open in IMG/M
3300009413\|Ga0114902_1179583	All Organisms → Viruses → environmental samples → uncultured virus	522	Open in IMG/M
3300009488\|Ga0114925_11211986	Not Available	554	Open in IMG/M
3300009602\|Ga0114900_1083486	Not Available	902	Open in IMG/M
3300009604\|Ga0114901_1092472	Not Available	966	Open in IMG/M
3300009613\|Ga0105228_115787	All Organisms → Viruses → environmental samples → uncultured virus	728	Open in IMG/M
3300009619\|Ga0105236_1038298	All Organisms → Viruses → environmental samples → uncultured virus	610	Open in IMG/M
3300010153\|Ga0098059_1268816	All Organisms → Viruses → environmental samples → uncultured virus	655	Open in IMG/M
3300017775\|Ga0181432_1232617	All Organisms → Viruses → environmental samples → uncultured virus	580	Open in IMG/M
3300021442\|Ga0206685_10225504	All Organisms → Viruses → environmental samples → uncultured virus	632	Open in IMG/M
3300021791\|Ga0226832_10012010	All Organisms → Viruses → environmental samples → uncultured virus	2779	Open in IMG/M
3300021791\|Ga0226832_10042681	All Organisms → Viruses → environmental samples → uncultured virus	1548	Open in IMG/M
3300021791\|Ga0226832_10068122	All Organisms → Viruses → environmental samples → uncultured virus	1255	Open in IMG/M
3300021791\|Ga0226832_10202391	All Organisms → Viruses → environmental samples → uncultured virus	776	Open in IMG/M
3300025043\|Ga0207907_104673	All Organisms → Viruses → environmental samples → uncultured virus	1379	Open in IMG/M
3300025045\|Ga0207901_1037127	All Organisms → Viruses → environmental samples → uncultured virus	656	Open in IMG/M
3300025046\|Ga0207902_1026681	Not Available	696	Open in IMG/M
3300025049\|Ga0207898_1006645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus → Chosvirus KM23C739	1381	Open in IMG/M
3300025049\|Ga0207898_1012786	Not Available	1043	Open in IMG/M
3300025069\|Ga0207887_1013446	All Organisms → Viruses → environmental samples → uncultured virus	1275	Open in IMG/M
3300025069\|Ga0207887_1042498	All Organisms → Viruses → environmental samples → uncultured virus	738	Open in IMG/M
3300025112\|Ga0209349_1190679	All Organisms → Viruses → environmental samples → uncultured virus	528	Open in IMG/M
3300025125\|Ga0209644_1005795	Not Available	2482	Open in IMG/M
3300025125\|Ga0209644_1009399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2020	Open in IMG/M
3300025125\|Ga0209644_1010542	All Organisms → Viruses → environmental samples → uncultured virus	1921	Open in IMG/M
3300025125\|Ga0209644_1041734	Not Available	1039	Open in IMG/M
3300025125\|Ga0209644_1045175	Not Available	1002	Open in IMG/M
3300025125\|Ga0209644_1056068	All Organisms → Viruses → environmental samples → uncultured virus	906	Open in IMG/M
3300025125\|Ga0209644_1119211	Not Available	628	Open in IMG/M
3300025125\|Ga0209644_1169474	Not Available	520	Open in IMG/M
3300025128\|Ga0208919_1042336	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1594	Open in IMG/M
3300025131\|Ga0209128_1145718	Not Available	713	Open in IMG/M
3300025251\|Ga0208182_1004506	Not Available	4751	Open in IMG/M
3300025251\|Ga0208182_1098883	All Organisms → Viruses → environmental samples → uncultured virus	526	Open in IMG/M
3300025264\|Ga0208029_1002970	Not Available	6208	Open in IMG/M
3300025264\|Ga0208029_1004985	Not Available	4293	Open in IMG/M
3300025264\|Ga0208029_1007960	Not Available	3141	Open in IMG/M
3300025267\|Ga0208179_1053414	Not Available	902	Open in IMG/M
3300025267\|Ga0208179_1114603	Not Available	517	Open in IMG/M
3300025280\|Ga0208449_1005281	Not Available	5219	Open in IMG/M
3300025282\|Ga0208030_1017532	Not Available	2438	Open in IMG/M
3300025286\|Ga0208315_1012309	Not Available	2931	Open in IMG/M
3300025286\|Ga0208315_1027159	Not Available	1701	Open in IMG/M
3300025873\|Ga0209757_10017734	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300025873\|Ga0209757_10028237	Not Available	1589	Open in IMG/M
3300025873\|Ga0209757_10030077	Not Available	1545	Open in IMG/M
3300025873\|Ga0209757_10043940	All Organisms → Viruses → environmental samples → uncultured virus	1301	Open in IMG/M
3300025873\|Ga0209757_10128679	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Chosvirus → Chosvirus KM23C739	786	Open in IMG/M
3300025873\|Ga0209757_10246496	All Organisms → Viruses → environmental samples → uncultured virus	567	Open in IMG/M
3300025873\|Ga0209757_10248903	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	564	Open in IMG/M
3300025873\|Ga0209757_10295418	Not Available	516	Open in IMG/M
3300026113\|Ga0208453_115593	All Organisms → Viruses → environmental samples → uncultured virus	504	Open in IMG/M
3300026115\|Ga0208560_1033035	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	514	Open in IMG/M
3300031606\|Ga0302119_10031950	Not Available	2224	Open in IMG/M
3300032360\|Ga0315334_11042598	All Organisms → Viruses → environmental samples → uncultured virus	708	Open in IMG/M
3300032820\|Ga0310342_100170229	All Organisms → Viruses → environmental samples → uncultured virus	2160	Open in IMG/M
3300032820\|Ga0310342_100249977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1838	Open in IMG/M
3300032820\|Ga0310342_103360915	Not Available	529	Open in IMG/M
3300033742\|Ga0314858_129203	All Organisms → Viruses → environmental samples → uncultured virus	647	Open in IMG/M
3300034629\|Ga0326756_033375	All Organisms → Viruses → environmental samples → uncultured virus	623	Open in IMG/M
3300034629\|Ga0326756_036452	Not Available	599	Open in IMG/M
3300034629\|Ga0326756_048165	Not Available	528	Open in IMG/M
3300034654\|Ga0326741_031571	Not Available	921	Open in IMG/M
3300034654\|Ga0326741_063313	Not Available	617	Open in IMG/M
3300034654\|Ga0326741_074053	Not Available	563	Open in IMG/M
3300034656\|Ga0326748_055065	All Organisms → Viruses → environmental samples → uncultured virus	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	87.60%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.79%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	3.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.65%
Coastal	Environmental → Aquatic → Marine → Coastal	0.83%
Strait	Environmental → Aquatic → Marine → Strait	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	73.55%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	13.22%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	3.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.65%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	46.28%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	21.49%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	12.40%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	5.79%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	3.31%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	3.31%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.48%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.65%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.83%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.83%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.83%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001731	Marine viral communities from the Pacific Ocean - LP-37	Environmental	Open in IMG/M
3300001735	Marine viral communities from the Pacific Ocean - LP-45	Environmental	Open in IMG/M
3300001743	Marine viral communities from the Pacific Ocean - LP-38	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009412	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009602	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009613	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250	Environmental	Open in IMG/M
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300025043	Marine viral communities from the Subarctic Pacific Ocean - LP-52 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental	Open in IMG/M
3300025049	Marine viral communities from the Pacific Ocean - LP-55 (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025286	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026113	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034656	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24514J20073_10059332	3300001731	Marine	MSKQFTIEVKHASQAQLLTIASELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
JGI24514J20073_10238561	3300001731	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHAWTKFGPRITINKKKLQALELRVPRHKPQAASRKRHNMNTFV*
JGI24520J20079_10092182	3300001735	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPKITINNKKLQALELRVPXHKPQAASRKRHNMNTFV*
JGI24515J20084_10080672	3300001743	Marine	MSKQFTIEVKHASQAQLLTIASELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
JGI24515J20084_10161171	3300001743	Marine	MKKFTIEVKHASPAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPSHKRQAASRKKVVHNRPYA*
JGI25131J35506_10030387	3300002511	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
JGI25131J35506_10225483	3300002511	Marine	MKQFTIEVSHASQAQISTIASELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
JGI25131J35506_10234984	3300002511	Marine	MKQFTIEVKHASQAQLSTIASELKLMSHNWQKFGPRITINNKKLQALELRVPRHKPQAASRKRHNMN
JGI25131J35506_10323094	3300002511	Marine	MKXFTXEVXXASXQAQLSTIASELKVMSHNWQKFGPRITINNKKLQALELRVPRHKPQAS
JGI25131J35506_10408112	3300002511	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPRHKPQASSRKKVVHNRPYA*
JGI25131J35506_10569261	3300002511	Marine	MKQFTIEVKHASGPQLQTIAAELRIMSHGWAKFGPRITINSKKLQALELRVPRGKPQAAS
JGI25136J39404_10078433	3300002760	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWKRFGARITINKKKLQALELRVPRHKPQAASRKRHNMNTFV*
JGI25136J39404_10143903	3300002760	Marine	MSKKFTIEVKHASGPQLQTIAAELKIMSHEWSRFGPRITIDNKKLQALELRVPSHKRQASSSKRHNIARFI*
JGI25136J39404_10148861	3300002760	Marine	MKQFTIEVAHASGPQLQTIAAELKIMSHGWAKFGPRITINSKKLQALELRVPRGKPQAASHKRHNMARFI*
JGI25136J39404_10193293	3300002760	Marine	VKQFTIEVSHASPAQLSTIASELKLMSHNWQKFGPKITINNKKLQALELRVPSHKRQAASDTI*
JGI25136J39404_10608931	3300002760	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRLQASSRKRHNMARFV*
JGI25136J39404_10908532	3300002760	Marine	MKQFTIEVSHASGPQLQTIAAELKIMSHSWTKFGPRITINNKKLQALELRDXKAQAASY
Ga0068470_15587542	3300006308	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAPSRKRHNMARFI*
Ga0068471_13684633	3300006310	Marine	MKQFTIEVQHASQAQLLTIAAELKLMSHGWTKFGPRITINNKKLQALELRIPSHKRAQASSHKLATIRK*
Ga0068471_14298032	3300006310	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAASPKRHSLTTFR*
Ga0068471_16465613	3300006310	Marine	MKQFTIEVSNASGPQLATIALELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAPSRKRHNMARFI*
Ga0068471_16466792	3300006310	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPYA*
Ga0068471_16468093	3300006310	Marine	MSKKFTIEVKHASGPQLQTIAAELKIMSHGWSRFGPRITIDNKKLQALELRVPSHKRQASSSKRHNIARFI*
Ga0068476_11563163	3300006324	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWTKFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPNA*
Ga0068501_13268163	3300006325	Marine	MILFTIVVKHASQAQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPSHKRQVASDTI*
Ga0068502_10119353	3300006336	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
Ga0068502_11700303	3300006336	Marine	MKKFTIEVSHATSPQLATIALELKIMSNGWARHGPRITINKKKLEALELRVPSHKRPQAPSRKRHNMARFI*
Ga0068502_12399332	3300006336	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHNWKRFGARITINNKKLQALELRVPRHKPQASSRKRHSMNTFQ*
Ga0068503_103674205	3300006340	Marine	MKQFTIEVQHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPRHKRPQAASPKR
Ga0068503_104541542	3300006340	Marine	MKQFTIEVKHASGPQLQTIAAELKIMSHNWTKFGPRITINNKKLQALELRVPRGKPQASSHKRHKLTMFI*
Ga0068503_105187222	3300006340	Marine	MGLTMSKKFTIEVKHASGPQLQTIAAELKIMSHEWSRFGPRITIDNKKLQALELRVPSHKRQASSSKRHNIARFI*
Ga0068503_107781333	3300006340	Marine	VKQFTIEVSHASQAQLSTIASELKLMSHNWQKFGARITINNKKLQALELRVPSHKRQAASVTK*
Ga0098035_11014693	3300006738	Marine	MKQFTIEVKHASQAQLLTIASELKLMSHNWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
Ga0098039_12942322	3300006753	Marine	MKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRITINNKKLQALELRVPSHKREATSHKRHNLTRFI*
Ga0098044_12217842	3300006754	Marine	MKQFTIEVKHASQAQLLTIASELKLMSHNWKRFGARITINNKKLQALELRVPRHKPQA
Ga0098044_13235403	3300006754	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
Ga0098054_11074712	3300006789	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTNFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
Ga0098041_12688072	3300006928	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
Ga0105668_11150713	3300007758	Background Seawater	MKQFTIEVSHASPAQLSTIASELKLMSHNWQKFGARITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
Ga0098052_10266823	3300008050	Marine	MKQFTIEVSHASQAQLSTIASELKVMSHNWTRFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
Ga0098052_12851242	3300008050	Marine	MKQFTIEVKHASGPQLQTIAAELKIMSHGWAKFGPRITINNKKLQALELRVPSHKRQAASRKRHKLTMFI*
Ga0098052_13109652	3300008050	Marine	MKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQASSSKRHKLTMFI*
Ga0098052_14014573	3300008050	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRKKVVHN
Ga0114898_10053648	3300008216	Deep Ocean	MKKFTIEISHASPGQLLTIAAELKIMSHSWQKFGPRITIDNKKLQALELRVPSHKRQASSLTRP*
Ga0114898_10383864	3300008216	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLEALELRVPSHKRQASSRKRHNMTKFI*
Ga0114898_10742703	3300008216	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMGHSWKRFGARITINNKKLQALELRVPRHKPQASSRK*
Ga0114899_11248503	3300008217	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV*
Ga0114899_11298102	3300008217	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLEALELRVPSHKRQASSRKRHNMTRFI*
Ga0114899_12841361	3300008217	Deep Ocean	MKKFTIEVSHASPGQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPYA*
Ga0114905_11021983	3300008219	Deep Ocean	MKQFTIEVSHASGAQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQASSRKRHNMAMFR*
Ga0114905_11349493	3300008219	Deep Ocean	MKQFKIEVSHASPGQLQTIAAELKIMSHGWQKFGPRITINNKKLQALELHVPSHKRQAASHKRHNLTRFI*
Ga0114905_12584071	3300008219	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLEALELRVPSHKRQASSRKRHNMTRFI**
Ga0114993_111355291	3300009409	Marine	MKKFTIEVSHASGPQLATIAAELKIMSHSWAKHGPRITINGSKLQALELRVPSTKRLQAASRKLHN
Ga0114903_10438093	3300009412	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLEALELRVPSHKRQASSRKRHNMTKLFDRMKL*
Ga0114903_11454322	3300009412	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELRIMSHAWTKFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPYA*
Ga0114902_11583062	3300009413	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMGHNWKRFGARITINNKKLQALELRVPRHKPQASSRKRHNMNTFV*
Ga0114902_11795832	3300009413	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELKIMSNGWAKFGPRIMINGHKLQALELRIPSHKRPQASSRKRHSLTTFK*
Ga0114925_112119861	3300009488	Deep Subsurface	QLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQASSRKRHNMARFI*
Ga0114900_10834863	3300009602	Deep Ocean	QFTIEVKHASKPQLQTIAAELKIMSHGWQKFGPRITINGHKLQALELRIPSHKRPQASSRKRHSLTTFK*
Ga0114901_10924722	3300009604	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMGHSWKRFGARITINNKKLQALELRVPRHKLQASSRK*
Ga0105228_1157873	3300009613	Marine Oceanic	MKQFTIEVSNASGPQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQASSRKRHNMARFI*
Ga0105236_10382982	3300009619	Marine Oceanic	MKQFTIEVKHASQAQLLSIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQASSRKRHNMARFI*
Ga0098059_12688163	3300010153	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTF
Ga0181432_12326171	3300017775	Seawater	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFG
Ga0206685_102255043	3300021442	Seawater	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAASPKRHSLTTFR
Ga0226832_100120105	3300021791	Hydrothermal Vent Fluids	MKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQAPSRKRHNMTMFR
Ga0226832_100426812	3300021791	Hydrothermal Vent Fluids	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPRHKPQASSRKKVVHNRPNA
Ga0226832_100681223	3300021791	Hydrothermal Vent Fluids	MKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQAASSKRHKLTMFI
Ga0226832_102023912	3300021791	Hydrothermal Vent Fluids	MKQFTIEVSHASGAQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQASSRKRH
Ga0207907_1046733	3300025043	Marine	MKKFTIEIKHASEAQLLTIAAELKIMSHGWAKFGPRILINGHKLQALELRVPRHKQQAASAKRHNITAFV
Ga0207901_10371271	3300025045	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRK
Ga0207902_10266812	3300025046	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPKITINNKKLQALELRVPRHKPQASSRKRHNMNTFV
Ga0207898_10066455	3300025049	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTRFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV
Ga0207898_10127862	3300025049	Marine	MKQFTIEVKHASGPQLQTIAAELKIMSHNWTKFGPRITINNKKLQALELRVPRGKPQASSHKRHKLTMFI
Ga0207887_10134463	3300025069	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRKRHSINTFV
Ga0207887_10424981	3300025069	Marine	MKKFTIEVKHASPAQLLTIAAELKLMSHSWTRFGPRITINNKKLQALELRVPSHKRQAASRKKVVHNRPYA
Ga0209349_11906791	3300025112	Marine	MKQFTIEVKHASEPQLQTIAAELKIMSHGWQKFGPRITINGSKLQALELRVPSHKRPQAPSRK
Ga0209644_10057953	3300025125	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRKRHNMNTFV
Ga0209644_10093995	3300025125	Marine	MKQFTIEVSHASQAQLLTIAAELKLMSHNWQKFGARITINNKKLQALELRVPRHKPQATSRKRHNMNTFV
Ga0209644_10105425	3300025125	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPRHKPQASSRKKVVHNRPYA
Ga0209644_10417343	3300025125	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLQALELRVPRHKPQASSRKRHNMNTFV
Ga0209644_10451753	3300025125	Marine	MKQFTIEVKHASGPQLQTIAAELKIMSHNWTKFGPRITINSKKLQALELRVPRHKPQASSRKRHNITAFI
Ga0209644_10560681	3300025125	Marine	MKQFTIEVKHASQAQLQTIAAELKLMSHNWTKFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV
Ga0209644_11192112	3300025125	Marine	SQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRLQASSRKRHNMARFV
Ga0209644_11694741	3300025125	Marine	VKQFTIEVKHASQAQLLTIAAELKLMGHNWKRFGARITINKKKLQALELRVPRHKPQAASRKRHNMNT
Ga0208919_10423364	3300025128	Marine	MKQFTIEVKHASQAQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTF
Ga0209128_11457182	3300025131	Marine	MGEGKFFRLMKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRIRINGDKLQALELRVPSHKRPQAASSKRHKLTMFI
Ga0208182_100450611	3300025251	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV
Ga0208182_10988832	3300025251	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELKLMGHNWTRFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPYA
Ga0208029_100297012	3300025264	Deep Ocean	MKKFTIEISHASPGQLLTIAAELKIMSHSWQKFGPRITIDNKKLQALELRVPSHKRQASSLTRP
Ga0208029_10049852	3300025264	Deep Ocean	MKKFTIEVSHASPGQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQAASRKKVVHNRPYA
Ga0208029_10079606	3300025264	Deep Ocean	MKQFKIEVSHASPGQLQTIAAELKIMSHGWQKFGPRITINNKKLQALELHVPSHKRQAASHKRHNLTRFI
Ga0208179_10534143	3300025267	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMGHSWKRFGARITINNKKLQALELRVPRHKPQASSRK
Ga0208179_11146031	3300025267	Deep Ocean	FKIEVSHASPGQLQTIAAELKIMSHGWQKFGPRITINNKKLQALELHVPSHKRQAASHKRHNLTRFI
Ga0208449_10052816	3300025280	Deep Ocean	MKQFTIEVKHASKPQLQTIAAELKIMSHGWQKFGPRITINGSKLQALELRVPSHKRPQASSRKRHNMARFI
Ga0208030_10175325	3300025282	Deep Ocean	MKQFTIEVKHASQAQLLTIAAELKLMSHSWTKFGPRITINKKKLEALELRVPSHKRQASSRKRHNMTKFI
Ga0208315_10123091	3300025286	Deep Ocean	MKKFTIDVSHASPGQLLTIAAELKIMSNGWAKFGPRIMINGHKLQALELRIPSHKRPQASSRKRHSLTTFK
Ga0208315_10271594	3300025286	Deep Ocean	MKQFRIEVSHASPGQLQTIAAELKIMSHGWQKFGPRITINNKKLQALELHVPSHKRQAASHKRHNLTRFI
Ga0209757_100177341	3300025873	Marine	MKQFTIEVKHASQAQLSTIASELKLMSHNWQKFGPRITINNKKLQALELRVPRHKPQASS
Ga0209757_100282375	3300025873	Marine	MSKKFTIEVKHASGPQLQTIAAELKIMSHEWSRFGPRITIDNKKLQALELRVPSHKRQASSSKRHNIARFI
Ga0209757_100300773	3300025873	Marine	MKQFTIEVSHASGPQLQTIAAELKIMSHGWQKFGPRITIDNKKLQALELRIPRGKPQASSHKRHNLTRFI
Ga0209757_100439403	3300025873	Marine	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRLQASSRKRHNMARFV
Ga0209757_101286793	3300025873	Marine	MKQFTIEVKHASQAQLQTIAAELKLMSHSWTRFGPRITINKKKLQALELRVPRHKPQASSRK
Ga0209757_102464962	3300025873	Marine	MKQFTIEVAHASGPQLQTIAAELKIMSHGWAKFGPRITINSQKLQALELRVPRGKPQAASHKRHKLTMFI
Ga0209757_102489032	3300025873	Marine	MKKFTIEVGHASQAQLLTIAAELKIMSHGWTKYGPRILINGQKLQALELRVPSHKRQATSHKRHNIARFI
Ga0209757_102954182	3300025873	Marine	MKQFTIEVKHASQAQLLTIASELKVMSHSWKRFGARITINNKKLQALELRVPRHKPQAASRKKVVHNRP
Ga0208453_1155932	3300026113	Marine Oceanic	MKQFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQASSRKRHNMARFI
Ga0208560_10330351	3300026115	Marine Oceanic	EVSNASGPQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQASSRKRHNMARFI
Ga0302119_100319502	3300031606	Marine	MVSSTTTKRKKMKKFTIEVSHASGPQLATIAAELKIMSHSWAKHGPRITINGSKLQALELRVPSTKRLQAASRKLHNVNTFR
Ga0315334_110425981	3300032360	Seawater	MKKFTIEVKHASQAQLLTIAAELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAASPKRHSLTTFR
Ga0310342_1001702292	3300032820	Seawater	MKQFTIEVSNASGPQLATIALELKLMSHGWTKFGPRITINKKKLEALELRVPSHKRPQAPSRKRHNMARFI
Ga0310342_1002499772	3300032820	Seawater	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQASSRKKVVHNRPNA
Ga0310342_1033609152	3300032820	Seawater	MKQFTIEVQHASQAQLLTIAAELKLMSHGWTKFGPRITINNKKLQALELRIPSHKRAQASSHKLATIRK
Ga0314858_129203_52_267	3300033742	Sea-Ice Brine	MKKFTIEVSHASGPQLATIAAELKIMSHSWAKHGPRILIDNKKLQALELRVPSTKRLQAASRKLHNVNTFR
Ga0326756_033375_379_591	3300034629	Filtered Seawater	MKKFTIEVKHASEAQLLTIAAELKIMSHGWAKFGPRILINGHKLQALELRVPRHKQQAASAKRHNITAFV
Ga0326756_036452_1_204	3300034629	Filtered Seawater	MKQFTIEVSHASQAQISTIASELKVMSHNWKRFGARITINNKKLQALELRVPRHKPQASSRKRHNMNT
Ga0326756_048165_288_500	3300034629	Filtered Seawater	MKQFTIEVKHASQAQLLTIAAELKLMGHNWKRFGPRITINNKKLQALELRVPRHKPQAASRKRHNMNTFV
Ga0326741_031571_751_921	3300034654	Filtered Seawater	MKQFTIEVKHASQAQLLTIAAELKLMGHNWKRFGPRITINNKKLQALELRVPRHKPQ
Ga0326741_063313_190_399	3300034654	Filtered Seawater	MKQFTIEVKHASQAQLLTIAAELKLMSHAWTRFGPRITINKKKLEALELRVPSHKRPQAPSRKRLIVTL
Ga0326741_074053_214_429	3300034654	Filtered Seawater	MKKFTIEVAHASQAQLLTIAAELKLMSHSWTKFGPRITIDNKKLQALELRIPGSRKQQASSRKRHKLAMFT
Ga0326748_055065_133_348	3300034656	Filtered Seawater	MKQFTIEVKHASQAQLLTIAAELKLMGHSWTKFGPRITINNKKLQALELRVPRHKPQATSRKKVVHNRPNA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072435

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences