NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F072423

Metagenome Family F072423

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F072423
Family Type Metagenome
Number of Sequences 121
Average Sequence Length 40 residues
Representative Sequence LDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI
Number of Associated Samples 101
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.17 %
% of genes from short scaffolds (< 2000 bps) 85.95 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.909 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(24.793 % of family members)
Environment Ontology (ENVO) Unclassified
(79.339 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.777 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF00462Glutaredoxin 58.68
PF01641SelR 23.14
PF00850Hist_deacetyl 5.79
PF028262-Hacid_dh_C 4.96
PF04773FecR 1.65
PF11924IAT_beta 1.65
PF07350DUF1479 1.65
PF01810LysE 0.83
PF01266DAO 0.83
PF01738DLH 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 23.14
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 11.57


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.91 %
UnclassifiedrootN/A9.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001349|JGI20160J14292_10026580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3096Open in IMG/M
3300001964|GOS2234_1058546All Organisms → cellular organisms → Bacteria → Proteobacteria527Open in IMG/M
3300002033|GOS24894_10305701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1689Open in IMG/M
3300002040|GOScombined01_104886822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria843Open in IMG/M
3300004279|Ga0066605_10362582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter524Open in IMG/M
3300005239|Ga0073579_1679781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1418Open in IMG/M
3300005510|Ga0066825_10119092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria965Open in IMG/M
3300005838|Ga0008649_10363437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter532Open in IMG/M
3300005931|Ga0075119_1041444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1202Open in IMG/M
3300005941|Ga0070743_10097924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique986Open in IMG/M
3300005942|Ga0070742_10024216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1619Open in IMG/M
3300005971|Ga0066370_10053158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1274Open in IMG/M
3300006027|Ga0075462_10250698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter524Open in IMG/M
3300006337|Ga0068495_1063115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter711Open in IMG/M
3300007681|Ga0102824_1189406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter542Open in IMG/M
3300007962|Ga0102907_1148941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter603Open in IMG/M
3300009058|Ga0102854_1242617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter517Open in IMG/M
3300009071|Ga0115566_10039685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3278Open in IMG/M
3300009071|Ga0115566_10559581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter644Open in IMG/M
3300009071|Ga0115566_10720315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter552Open in IMG/M
3300009077|Ga0115552_1361002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter575Open in IMG/M
3300009172|Ga0114995_10047415All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2463Open in IMG/M
3300009172|Ga0114995_10204757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1095Open in IMG/M
3300009172|Ga0114995_10805676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter515Open in IMG/M
3300009420|Ga0114994_10354450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique974Open in IMG/M
3300009420|Ga0114994_10446149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter855Open in IMG/M
3300009422|Ga0114998_10166039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1058Open in IMG/M
3300009425|Ga0114997_10058656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2448Open in IMG/M
3300009425|Ga0114997_10191880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1181Open in IMG/M
3300009425|Ga0114997_10344910All Organisms → cellular organisms → Bacteria → Proteobacteria814Open in IMG/M
3300009425|Ga0114997_10504310All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter644Open in IMG/M
3300009447|Ga0115560_1049671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1861Open in IMG/M
3300009481|Ga0114932_10517981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria701Open in IMG/M
3300009498|Ga0115568_10049112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2234Open in IMG/M
3300009498|Ga0115568_10211652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter889Open in IMG/M
3300009512|Ga0115003_10881841Not Available520Open in IMG/M
3300009526|Ga0115004_10302542All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium949Open in IMG/M
3300009705|Ga0115000_10129594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1687Open in IMG/M
3300010300|Ga0129351_1030403All Organisms → cellular organisms → Bacteria → Proteobacteria2236Open in IMG/M
3300010883|Ga0133547_10615283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2168Open in IMG/M
3300010883|Ga0133547_10894205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1731Open in IMG/M
3300012919|Ga0160422_10112870All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1608Open in IMG/M
3300012919|Ga0160422_10191315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1236Open in IMG/M
3300012928|Ga0163110_11202757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300012954|Ga0163111_10623598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1009Open in IMG/M
3300012954|Ga0163111_10928291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria836Open in IMG/M
3300012954|Ga0163111_11564549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique654Open in IMG/M
3300017697|Ga0180120_10058337All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300017717|Ga0181404_1016526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1919Open in IMG/M
3300017734|Ga0187222_1026793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1386Open in IMG/M
3300017740|Ga0181418_1102060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique695Open in IMG/M
3300017756|Ga0181382_1196239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique511Open in IMG/M
3300017770|Ga0187217_1029325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1951Open in IMG/M
3300017783|Ga0181379_1032823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2052Open in IMG/M
3300018428|Ga0181568_10275470All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1377Open in IMG/M
3300020251|Ga0211700_1037107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique526Open in IMG/M
3300020312|Ga0211542_1087422Not Available543Open in IMG/M
3300020362|Ga0211488_10207887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter526Open in IMG/M
3300020371|Ga0211500_1069656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1069Open in IMG/M
3300020391|Ga0211675_10144695All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1063Open in IMG/M
3300020391|Ga0211675_10446786Not Available528Open in IMG/M
3300020396|Ga0211687_10241540All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique722Open in IMG/M
3300020401|Ga0211617_10133047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1038Open in IMG/M
3300020403|Ga0211532_10413197Not Available502Open in IMG/M
3300020404|Ga0211659_10261777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter766Open in IMG/M
3300020405|Ga0211496_10393907Not Available516Open in IMG/M
3300020417|Ga0211528_10312112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria588Open in IMG/M
3300020424|Ga0211620_10034276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2210Open in IMG/M
3300020424|Ga0211620_10480456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique523Open in IMG/M
3300020442|Ga0211559_10091494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1469Open in IMG/M
3300020442|Ga0211559_10292472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique760Open in IMG/M
3300020446|Ga0211574_10272517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria732Open in IMG/M
3300020454|Ga0211548_10615015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique530Open in IMG/M
3300020455|Ga0211664_10561442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique518Open in IMG/M
3300020460|Ga0211486_10530696All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique500Open in IMG/M
3300020461|Ga0211535_10035347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2072Open in IMG/M
3300020463|Ga0211676_10147925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1481Open in IMG/M
3300020465|Ga0211640_10538039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria634Open in IMG/M
3300020469|Ga0211577_10153422All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1550Open in IMG/M
3300020470|Ga0211543_10084545All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1633Open in IMG/M
3300020595|Ga0206126_10062364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1963Open in IMG/M
3300021375|Ga0213869_10351083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique615Open in IMG/M
3300021375|Ga0213869_10452906All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300021378|Ga0213861_10125757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1489Open in IMG/M
3300021378|Ga0213861_10401516All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique673Open in IMG/M
3300023178|Ga0255759_10295957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1020Open in IMG/M
3300023245|Ga0222655_1031556All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300023294|Ga0222670_1027120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1001Open in IMG/M
(restricted) 3300024260|Ga0233441_1126329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique837Open in IMG/M
(restricted) 3300024327|Ga0233434_1300593All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter543Open in IMG/M
(restricted) 3300024336|Ga0233447_1009995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4464Open in IMG/M
3300025636|Ga0209136_1092712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique890Open in IMG/M
3300025667|Ga0209043_1069090All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique999Open in IMG/M
3300025685|Ga0209095_1197760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300025688|Ga0209140_1080237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1043Open in IMG/M
3300025699|Ga0209715_1166244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter725Open in IMG/M
3300025803|Ga0208425_1036783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1252Open in IMG/M
3300025830|Ga0209832_1071964All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1162Open in IMG/M
3300025880|Ga0209534_10448220Not Available544Open in IMG/M
3300025890|Ga0209631_10229876All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique936Open in IMG/M
3300025892|Ga0209630_10071276All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1973Open in IMG/M
3300026085|Ga0208880_1008595All Organisms → cellular organisms → Bacteria → Proteobacteria2082Open in IMG/M
3300027687|Ga0209710_1033119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2518Open in IMG/M
3300027704|Ga0209816_1111225All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium1046Open in IMG/M
3300027752|Ga0209192_10192775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique781Open in IMG/M
3300027774|Ga0209433_10058199All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1389Open in IMG/M
3300027779|Ga0209709_10021956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4150Open in IMG/M
3300027779|Ga0209709_10070282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1934Open in IMG/M
3300027791|Ga0209830_10030934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2995Open in IMG/M
3300027801|Ga0209091_10024812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3760Open in IMG/M
3300027813|Ga0209090_10270157All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique853Open in IMG/M
3300027839|Ga0209403_10544932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique576Open in IMG/M
3300031519|Ga0307488_10118312All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1902Open in IMG/M
3300031519|Ga0307488_10371020All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique895Open in IMG/M
3300031627|Ga0302118_10055511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2013Open in IMG/M
3300031630|Ga0308004_10323735Not Available589Open in IMG/M
3300031644|Ga0308001_10308580Not Available593Open in IMG/M
3300031659|Ga0307986_10413778Not Available535Open in IMG/M
3300031775|Ga0315326_10931847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique534Open in IMG/M
3300032073|Ga0315315_11305782Not Available637Open in IMG/M
3300032360|Ga0315334_11701810Not Available537Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine24.79%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine22.31%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine8.26%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.96%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.13%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater3.31%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.31%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine3.31%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.48%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.48%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.48%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.48%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater1.65%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.65%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.65%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.65%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.65%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.65%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.65%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.83%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.83%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.83%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.83%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001964Marine microbial communities from Rosario Bank, Honduras - GS018EnvironmentalOpen in IMG/M
3300002033Marine microbial communities from the Sargasso Sea - GS000a &bEnvironmentalOpen in IMG/M
3300002040GS000c - Sargasso Station 3EnvironmentalOpen in IMG/M
3300004279Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10mEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300005838Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNAEnvironmentalOpen in IMG/M
3300005931Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300005942Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757EnvironmentalOpen in IMG/M
3300005971Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_AEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006337Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025mEnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300007962Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02EnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017734Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020251Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555940-ERR599040)EnvironmentalOpen in IMG/M
3300020312Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977)EnvironmentalOpen in IMG/M
3300020362Marine microbial communities from Tara Oceans - TARA_A100001234 (ERX556035-ERR599049)EnvironmentalOpen in IMG/M
3300020371Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991)EnvironmentalOpen in IMG/M
3300020391Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300020401Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020405Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)EnvironmentalOpen in IMG/M
3300020417Marine microbial communities from Tara Oceans - TARA_B100000073 (ERX556034-ERR599082)EnvironmentalOpen in IMG/M
3300020424Marine microbial communities from Tara Oceans - TARA_B100000242 (ERX556056-ERR599138)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020454Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)EnvironmentalOpen in IMG/M
3300020455Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)EnvironmentalOpen in IMG/M
3300020460Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)EnvironmentalOpen in IMG/M
3300020461Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)EnvironmentalOpen in IMG/M
3300020463Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)EnvironmentalOpen in IMG/M
3300020465Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300020595Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300023245Saline water microbial communities from Ace Lake, Antarctica - #423EnvironmentalOpen in IMG/M
3300023294Saline water microbial communities from Ace Lake, Antarctica - #732EnvironmentalOpen in IMG/M
3300024260 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_135_MGEnvironmentalOpen in IMG/M
3300024327 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_120_MGEnvironmentalOpen in IMG/M
3300024336 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_135_MGEnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025667Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025685Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes)EnvironmentalOpen in IMG/M
3300025688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025880Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026085Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027704Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027774Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI20160J14292_1002658013300001349Pelagic MarineDLLNLLHSDYGEKELIKKVSSIEKNLNTLEKKLLVKLKRMTIYK*
GOS2234_105854633300001964MarineIMEKKGSMKKVLNIERNLNTLENKYLVKLKKVIIYSL*
GOS24894_1030570113300002033MarineDHSNPPHLDYGEKGFMKKVSNIERNLNTLENKYLVKLKKMIIYSL
GOScombined01_10488682213300002040MarineHHLDHGEKGFMKKVSNIEKNLNTLENKYLVKLKKVIIYSL*
Ga0066605_1036258213300004279MarineLFLLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0073579_167978143300005239MarineMRRSVKPLRLDYGEKELIKKVLNTEKNLNILEKKLLVKLKRMIIYKL*
Ga0066825_1011909213300005510MarineHLDYGEKEFTKKVLNTEKNLNTLENKYLVKLKKMIIYNL*
Ga0008649_1036343733300005838MarineLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*NQ*
Ga0075119_104144413300005931Saline LakeLLDYGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0070743_1009792443300005941EstuarineGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0070742_1002421643300005942EstuarineSLFLLDCGEKELIKKVLSTKKSSNILEKKLLVKLKRMIIYNP*
Ga0066370_1005315813300005971MarineLNHPHLDYGEKEFTKKVLNTEKNLNTLENKYLVKLKKMIIYNL*
Ga0075462_1025069813300006027AqueousLLRLDYGEKELIKKVLNTEKNLNILEKKLLVKLKRMIIYKI*
Ga0068495_106311513300006337MarinePLDCGEKELIKKVLNIEKSLNILENKYLVKLKKVTIYNS*
Ga0102824_118940613300007681EstuarineLLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0102907_114894133300007962EstuarineLDYGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0102854_124261733300009058EstuarineLDYGEKELIKKVLNTEKNLNILEKKLLVKLKRMIIYKS*
Ga0115566_1003968573300009071Pelagic MarineCGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN*
Ga0115566_1055958133300009071Pelagic MarineDYGEKELIKKALNIKKNLNTQEKKLLVKLERMIIYKL*
Ga0115566_1072031513300009071Pelagic MarineNLLRLDYGEKELIKKVLNTEKNLNILEKKLLVKLKRMIIYRI*
Ga0115552_136100213300009077Pelagic MarineNLLRLDYGEKELIKKVLNTEKNLNILEKKLLVKLKRMIIYKI*
Ga0114995_1004741513300009172MarineNQYHLDCGEKELIKKVLNTEKSLNILEKKLLVKLKRMIIYKV*
Ga0114995_1020475713300009172MarineNQYHLDCGEKELIKKVLNTEKSLNILEKKLLVKLKRMIIYKK*
Ga0114995_1080567613300009172MarineSLYLLDCGEKELIKKALNIKRNSSIQEKKLLVKLKRMIIYKS*
Ga0114994_1035445043300009420MarineFLLDCGEKELIKKVSSIKKNLNTLEKKLLVKSKRMIIYKL*
Ga0114994_1044614933300009420MarineFLLDCGEKELIKKVLNTKKSLNIQEKKLLAKLKRMIIYKA*
Ga0114998_1016603913300009422MarineLLDCGEKELIKKVLSIKRNLSIQEKKLLVKLKRMIIYNS*
Ga0114997_1005865653300009425MarineDCGEKELIKKVLNTKKSSNIQEKKLLAKLKRMIIYKP*
Ga0114997_1019188013300009425MarineLFLLDCGEKELIKKVLSTKKSSNIQEKKLLVKLKRMIIYKL*
Ga0114997_1034491043300009425MarineCGEKELIKKASNTEKSLNTLEKKLLAKLKRMIIYKI*
Ga0114997_1050431033300009425MarineFLLDCGEKELIKKVLSTKKSSNIQEKKLLVKLKRMIIYRS*
Ga0115560_104967113300009447Pelagic MarineCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI*
Ga0114932_1051798113300009481Deep SubsurfaceELSNLPLSDYGEKEFTKKVLNIEKNLNIQENKLLVKLKKVIIFKK*
Ga0115568_1004911253300009498Pelagic MarineGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN*
Ga0115568_1021165233300009498Pelagic MarineGEKELIKKVSSIEKNLNTLEKKLLVKLKRMTIYKL*
Ga0115003_1088184133300009512MarineDCGEKELIKKVLNTKKSSNIQEKKLLVKLKRMIIYKS*
Ga0115004_1030254233300009526MarineFLLDCGEKELIKKVLNTKKSSNIQEKKLLAKLKRMIIYES*
Ga0115000_1012959453300009705MarineLLDCGEKELIKKASNTEKSLNTLEKKLLAKLKRMIIYKI*
Ga0129351_103040353300010300Freshwater To Marine Saline GradientEKEFIKKVLNIEKNLNTQEKKLLVKLKKVIIPNL*
Ga0133547_1061528313300010883MarineSLFLLGCGEKELIKKVLNTKKSSNIQGKKLLVKLKRMIIYNS*
Ga0133547_1089420563300010883MarineLLDCGEKELIKKVLNIKKNLNIPGKKLLAKLKRMIIYRI*
Ga0160422_1011287053300012919SeawaterPHLDYGEKEFMKKVSNIEKNLNILENKCLVKLKKVITYNS*
Ga0160422_1019131533300012919SeawaterGEKEFIKKVSNTEKNLNIQENKLLVKLKKVIICNL*
Ga0163110_1120275713300012928Surface SeawaterDRLNHLHLDYGEKEFTKKVLNIEKNLNFLENKCLVKLKKVIIYNL*
Ga0163111_1062359813300012954Surface SeawaterEKEFMKKVLNIEKNLNILENKYLVKLKKMIIYNL*
Ga0163111_1092829143300012954Surface SeawaterHLDCGEKEFMKKVLNIEKNLNILEKNYLVKLKKVIIYN*
Ga0163111_1156454913300012954Surface SeawaterDYGEKEFMKKVLNIEKNLNTLENKCLVKLEKVIIYNL*
Ga0180120_1005833743300017697Freshwater To Marine Saline GradientLLDYGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKIXKQ
Ga0181404_101652653300017717SeawaterLSNHLLLDCGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN
Ga0187222_102679313300017734SeawaterEDHLNHLHLDYGEKEFTKKVLNIEKNLNFLENKCLVK
Ga0181418_110206033300017740SeawaterYGEKELIKKVLNIKKSSNIQEKKLLVKLKRMIIYKSXNQ
Ga0181382_119623913300017756SeawaterLDYGEKEFMKKALNIEKNLNTLEKLYLVKLKKVITYNVXKK
Ga0187217_102932543300017770SeawaterDYGEKELIKKVSSIEKNLNTLEKKLLVKLKRMTIYNIXNQ
Ga0181379_103282363300017783SeawaterCGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN
Ga0181568_1027547033300018428Salt MarshMSSKLXEEILNHLHLDYGEKEFMKKVSNIGKNLNTLENKCLVKLKKVIIYNL
Ga0211700_103710713300020251MarineLDYGEKEFMKKVSNIEKNLNTLENKYLVKLKKVIIYNL
Ga0211542_108742223300020312MarineENLSNHHHLDYGEKEFIKKVLNTEKNLNIQENKLLVK
Ga0211488_1020788733300020362MarineGEKEFMKKVLNIEKNLNIQENKYLVKLKKVIIYKL
Ga0211500_106965633300020371MarineSNHPHLDYGEKGFMKKVLNIEKNLNTLENKYLVKLKKVIIYSL
Ga0211675_1014469543300020391MarineHLDYGEKELIKKVSNIEKSLNILENKLLVKLKKVITYNL
Ga0211675_1044678633300020391MarineNHPHLDFGGKELIKKVLNIKKNLNTHGNKLLVKLKKVIIFKEXKM
Ga0211687_1024154013300020396MarineLDCGEKELIKKVLNTKKNLNIQEKKLLVKLKRMIIYNT
Ga0211617_1013304743300020401MarineYGEKEFTKKVLNIEKNLNFLENKCLVKLKKVIIYNL
Ga0211532_1041319713300020403MarineEDLLNHPHLDYGEKEFTKKALNIEKNLNILENKYLVKLKKMIICKS
Ga0211659_1026177733300020404MarineLGCGENELIRKVLNIEKNLNTRENKLLVKLKRMIIYKL
Ga0211496_1039390733300020405MarineLGYGEKEFMKKASNIEKSLNTLEKLYLVKLKKVIIYKL
Ga0211528_1031211213300020417MarineHLNHLHLDYGEKEFTKKVSNIEKNLNILENKCLVKLKKVIIYNS
Ga0211620_1003427633300020424MarinePHLDYGEKEFIKKVSNTEKNLSIQENKYLVKLKKAIIYKL
Ga0211620_1048045633300020424MarineHLDYGEKEFIKKVSNTEKNLNIQEKKLLVKLKKVITCK
Ga0211559_1009149413300020442MarineDYGEKEFMKKVSNIGKNLNTLENKCLVKLKKVIIYNL
Ga0211559_1029247213300020442MarineDYGEKEFMKKVSNIGKNLNTLENKCLVKLKKVIIYNS
Ga0211574_1027251713300020446MarineLLNHPHLDYGEKEFTKKVLNTEKNLNTLENKYLVKLKKMIIYNL
Ga0211548_1061501513300020454MarineDHSNPPHLDYGEKEFMKKVSNIEKNLNTLENKYLVKLKKVIIYSL
Ga0211664_1056144233300020455MarineHLDYGEKEFMKKALNIEKNLNTLEKLYLVKLKKVITYNV
Ga0211486_1053069633300020460MarineHPHLDYGEKEFMKKVSNIEKNLNILENKCLVKLKKVITYNS
Ga0211535_1003534733300020461MarineLSNHPHLDYGEKEFIKKVSNTEKNLSIQENKYLVKLKKAIIYKL
Ga0211676_1014792543300020463MarineYGEKELIKKVSNIEKSLNILENKLLLKLKKVIIYNK
Ga0211640_1053803913300020465MarineNHHLLDYGEKEFMKKVLNIEKNLNTLEKLYLVKLKKVIIYKE
Ga0211577_1015342243300020469MarineEDLLNQLLLDYGEKELTKKVLNTEKNLNTLEKKLLVKLKKVTTYSL
Ga0211543_1008454533300020470MarineSPPHLDCGEKEFTKKVLNIEKNLNILENKFLVKLKKVIIYRL
Ga0206126_1006236453300020595SeawaterFLLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI
Ga0213869_1035108313300021375SeawaterFLLDCGEKELIKKVLNIGKNLNTLEKKLLVKLKRMIIYKI
Ga0213869_1045290633300021375SeawaterLLLDYGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN
Ga0213861_1012575713300021378SeawaterNHLLLDCGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISN
Ga0213861_1040151633300021378SeawaterNLLRLDYGEKELTKKVLNTEKNLNILEKKLLVKLKRMIIYKT
Ga0255759_1029595743300023178Salt MarshLHSDYGEKEFMKKVSNIGKNLNTLENKCLVKLKKVIIYNL
Ga0222655_103155643300023245Saline WaterLFLLDCGEKELIKKVLNTKKSSNIQEKKLLAKLKRTIIYKI
Ga0222670_102712033300023294Saline WaterLDCGEKELIKKVLNTKKSSNIQEKKLLAKLKRMIIYKS
(restricted) Ga0233441_112632943300024260SeawaterLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI
(restricted) Ga0233434_130059333300024327SeawaterDCGEKELIKKVLSIKRNLSIQEKKLLVKLKRMIIYNL
(restricted) Ga0233447_100999573300024336SeawaterDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI
Ga0209136_109271213300025636MarineLDYGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKI
Ga0209043_106909043300025667MarineLLDYGEKELIKKALNIKKNLNTLEKKLLVKLKRMIIYKIXNQ
Ga0209095_119776033300025685Pelagic MarineLLLDYGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISNL
Ga0209140_108023743300025688MarineFLLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMIIYKIXNQ
Ga0209715_116624413300025699Pelagic MarineLFLLDCGEKELIKKALNIKKNLNTQEKKLLVKLERMIIYKLXNQ
Ga0208425_103678313300025803AqueousLDCGEKELTKKVLNTEKNLNILEKKLLVKLKRMIIYKL
Ga0209832_107196453300025830Pelagic MarineDYGEKEFIKKVLNIEKNLNTQENKLLVKLKKVIISNL
Ga0209534_1044822033300025880Pelagic MarineFLLDCGEKELTKKVLSTKKSSNILEKKLLVKLERMIIYNP
Ga0209631_1022987643300025890Pelagic MarineEKGLIKKVLNTKKSSNIQEKKLLVKLKRMIIYKSXNQ
Ga0209630_1007127613300025892Pelagic MarineGEKELIKKVLNIEKNLNTLEKKLLAKLKRMIIYKL
Ga0208880_100859513300026085MarineEHLNLHLLDCGGKEFMKKVLNIEKNLNIQENKYLVKLKKVIIYKL
Ga0209710_103311953300027687MarineCLLDCGEKELIKKASNTEKSLNTLEKKLLAKLKRMIIYKI
Ga0209816_111122533300027704MarineDCGEKELTKKVLNIRRSLNILEKKLLVKLKRMIIYRLXKQ
Ga0209192_1019277513300027752MarineLYLLDCGEKELIKKALNIKRNSSIQEKKLLVKLKRMIIYKSXNQ
Ga0209433_1005819943300027774MarineNLSNHPHLDYGEKEFIKKVSNTEKNLNIQENKLLVK
Ga0209709_1002195673300027779MarineLDCGEKELIKKVLNTKKSSNIQEKKLLAKLKRMIIYKP
Ga0209709_1007028253300027779MarineCGEKELIKKASNTEKSLNTLEKKLLAKLKRMIIYKI
Ga0209830_1003093413300027791MarineLLDCGERELIKKVLNTEKSLNIPEKKLLAKLKRMIIYNS
Ga0209091_1002481213300027801MarineLGCGEKGLIKKVLNIEKNLNILEKKLLVKLKRMIIYKI
Ga0209090_1027015733300027813MarineLFLLDCGEKELIKKVLNTKKSLNIQEKKLLAKLKRMIIYKA
Ga0209403_1054493233300027839MarineCGEKELIKKVLNIEKSLNTPEKKLLVKLKRMIIYKI
Ga0307488_1011831253300031519Sackhole BrineLLDCGEKELIKKALSIKRNSSIQEKKLLVKLKRMIIYNP
Ga0307488_1037102043300031519Sackhole BrineGEKELIKKALSIKRNLSIQEKKLLVKLKRMIIYNSXNQ
Ga0302118_1005551113300031627MarineFLLGCGEKGLIKKVLNIEKNLNILEKKLLVKLKRMIIYKI
Ga0308004_1032373513300031630MarineLDCGEKELIKKVLNIERNLNILEKKLLVKLKRMIIYNSXKL
Ga0308001_1030858013300031644MarineCGERELIKKVLNIERNLNILEKKLLVKLKRMIIYNSXKL
Ga0307986_1041377833300031659MarineCGEKELIKKVLNTKKNLNILGKKLLVKLKRMTIYK
Ga0315326_1093184733300031775SeawaterKELIKKVLNIEKNLNIPEKKLVVKLKKMIIYNPXKM
Ga0315315_1130578233300032073SeawaterLNLLLLDCGEKELIKKVLNIEKNLNTLEKKLLVKLKRMTIYNI
Ga0315334_1170181033300032360SeawaterFFLDCGEKELIKKALNIEKNLNTPEKKYLVKLKRMTIYKL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.