Metagenome Family F072417

Basic Information
Family ID	F072417
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	70 residues
Representative Sequence	SPKAGHRADDARLRNANVRTAIVLASIAAVFFVGIVVAKFIGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Number of Associated Samples	103
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.18 %
% of genes near scaffold ends (potentially truncated)	30.58 %
% of genes from short scaffolds (< 2000 bps)	80.99 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (72.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (11.570 % of family members)
Environment Ontology (ENVO)	Unclassified (44.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.628 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.98% β-sheet: 0.00% Coil/Unstructured: 34.02%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04442	CtaG_Cox11	42.98
PF00115	COX1	30.58
PF00510	COX3	8.26
PF11137	DUF2909	2.48
PF02104	SURF1	0.83
PF01040	UbiA	0.83
PF13442	Cytochrome_CBB3	0.83
PF00581	Rhodanese	0.83
PF06968	BATS	0.83
PF01850	PIN	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG3175	Cytochrome c oxidase assembly protein Cox11	Posttranslational modification, protein turnover, chaperones [O]	42.98
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	8.26
COG3346	Cytochrome oxidase assembly protein ShyY1	Posttranslational modification, protein turnover, chaperones [O]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.86 %
Unclassified	root	N/A	23.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.73 %
Unclassified	root	N/A	23.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.13 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.90 %
Unclassified	root	N/A	23.14 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	4.13 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	57.85 %
Unclassified	root	N/A	23.14 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	4.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	4.13 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	3.31 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	3.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	4.13 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	3.31 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
asterids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
campanulids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Asterales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Asteraceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Asteroideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Anthemideae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Anthemidinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Tanacetum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.14 %
Tanacetum cinerariifolium	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	4.13 %
Zoogloea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1.65 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH01AFOP6	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	518	Open in IMG/M
3300000559\|F14TC_101031926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	883	Open in IMG/M
3300004079\|Ga0055514_10190473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	579	Open in IMG/M
3300004079\|Ga0055514_10209008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	560	Open in IMG/M
3300005331\|Ga0070670_100037468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	4173	Open in IMG/M
3300005334\|Ga0068869_100032115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3698	Open in IMG/M
3300005347\|Ga0070668_100162731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1811	Open in IMG/M
3300005354\|Ga0070675_100478199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1120	Open in IMG/M
3300005354\|Ga0070675_101771554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	570	Open in IMG/M
3300005355\|Ga0070671_101889251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	531	Open in IMG/M
3300005367\|Ga0070667_100001555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	20577	Open in IMG/M
3300005548\|Ga0070665_100507023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1218	Open in IMG/M
3300005548\|Ga0070665_102095795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	570	Open in IMG/M
3300005578\|Ga0068854_101114057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	704	Open in IMG/M
3300005617\|Ga0068859_101253918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	817	Open in IMG/M
3300005841\|Ga0068863_100013730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7808	Open in IMG/M
3300005841\|Ga0068863_100070626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3302	Open in IMG/M
3300005841\|Ga0068863_101370047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	715	Open in IMG/M
3300005842\|Ga0068858_100289222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1562	Open in IMG/M
3300005843\|Ga0068860_100310322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1546	Open in IMG/M
3300005940\|Ga0073913_10019978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	961	Open in IMG/M
3300006050\|Ga0075028_101093130	Not Available	500	Open in IMG/M
3300006056\|Ga0075163_10999268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	857	Open in IMG/M
3300006056\|Ga0075163_11986278	Not Available	542	Open in IMG/M
3300006057\|Ga0075026_100433434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	745	Open in IMG/M
3300006354\|Ga0075021_10420609	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300006642\|Ga0075521_10047772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1858	Open in IMG/M
3300006871\|Ga0075434_100261699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1749	Open in IMG/M
3300007521\|Ga0105044_10205851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1983	Open in IMG/M
3300007799\|Ga0105049_10078373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3220	Open in IMG/M
3300009032\|Ga0105048_10018278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	10787	Open in IMG/M
3300009092\|Ga0105250_10554445	Not Available	528	Open in IMG/M
3300009094\|Ga0111539_11501515	Not Available	781	Open in IMG/M
3300009100\|Ga0075418_11044824	Not Available	884	Open in IMG/M
3300009131\|Ga0115027_10119306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1556	Open in IMG/M
3300009148\|Ga0105243_10181776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1829	Open in IMG/M
3300009167\|Ga0113563_10356940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1541	Open in IMG/M
3300009527\|Ga0114942_1080480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1049	Open in IMG/M
3300009527\|Ga0114942_1230980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	682	Open in IMG/M
3300009870\|Ga0131092_10576080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	990	Open in IMG/M
3300010051\|Ga0133939_1009250	All Organisms → cellular organisms → Bacteria → Proteobacteria	54007	Open in IMG/M
3300010401\|Ga0134121_12363917	Not Available	571	Open in IMG/M
3300010403\|Ga0134123_10052968	All Organisms → cellular organisms → Bacteria → Proteobacteria	3063	Open in IMG/M
3300011438\|Ga0137451_1160407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	706	Open in IMG/M
3300013296\|Ga0157374_11216799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	775	Open in IMG/M
3300013306\|Ga0163162_11590164	Not Available	745	Open in IMG/M
3300013306\|Ga0163162_12665174	Not Available	575	Open in IMG/M
3300013769\|Ga0119887_1007875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3396	Open in IMG/M
3300014325\|Ga0163163_10342641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1550	Open in IMG/M
3300014498\|Ga0182019_10228463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1215	Open in IMG/M
3300014968\|Ga0157379_10300895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1462	Open in IMG/M
3300014968\|Ga0157379_12130197	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300014969\|Ga0157376_10578737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1115	Open in IMG/M
3300017947\|Ga0187785_10233914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	816	Open in IMG/M
3300018052\|Ga0184638_1035972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1792	Open in IMG/M
3300018072\|Ga0184635_10293020	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300018084\|Ga0184629_10363350	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	762	Open in IMG/M
3300018084\|Ga0184629_10577596	Not Available	576	Open in IMG/M
3300018469\|Ga0190270_11458121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	732	Open in IMG/M
3300018476\|Ga0190274_10560500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1159	Open in IMG/M
3300018481\|Ga0190271_10557105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1262	Open in IMG/M
3300018481\|Ga0190271_11322726	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	841	Open in IMG/M
3300020059\|Ga0193745_1119194	Not Available	550	Open in IMG/M
3300020186\|Ga0163153_10028442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	4276	Open in IMG/M
3300022549\|Ga0212091_10276292	Not Available	686	Open in IMG/M
3300025315\|Ga0207697_10469472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	557	Open in IMG/M
3300025903\|Ga0207680_10067377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	2205	Open in IMG/M
3300025914\|Ga0207671_11116846	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300025923\|Ga0207681_11485835	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300025925\|Ga0207650_10551415	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	966	Open in IMG/M
3300025925\|Ga0207650_10854515	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300025930\|Ga0207701_11138902	Not Available	645	Open in IMG/M
3300025938\|Ga0207704_10801703	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300025940\|Ga0207691_10196608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1757	Open in IMG/M
3300025940\|Ga0207691_10263086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1487	Open in IMG/M
3300025942\|Ga0207689_10245965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1479	Open in IMG/M
3300025960\|Ga0207651_12103719	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300025972\|Ga0207668_10136434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Zoogloea	1880	Open in IMG/M
3300025972\|Ga0207668_10228569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300026035\|Ga0207703_12337310	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300026088\|Ga0207641_10084121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2769	Open in IMG/M
3300026088\|Ga0207641_10121303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2333	Open in IMG/M
3300026088\|Ga0207641_10797708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	934	Open in IMG/M
3300027547\|Ga0209864_1059727	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300027823\|Ga0209490_10103449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2066	Open in IMG/M
3300027850\|Ga0209591_10129487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2156	Open in IMG/M
3300027870\|Ga0209023_10051018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3145	Open in IMG/M
3300027871\|Ga0209397_10105338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	1189	Open in IMG/M
3300027885\|Ga0209450_10136370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1678	Open in IMG/M
3300027885\|Ga0209450_10332876	Not Available	1101	Open in IMG/M
3300027885\|Ga0209450_10345639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1080	Open in IMG/M
3300027894\|Ga0209068_10864371	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300027897\|Ga0209254_10349588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	1113	Open in IMG/M
3300028379\|Ga0268266_10501743	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1159	Open in IMG/M
3300028380\|Ga0268265_10052570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3082	Open in IMG/M
3300028381\|Ga0268264_10576308	Not Available	1107	Open in IMG/M
3300028770\|Ga0302258_1148361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300028814\|Ga0307302_10677782	Not Available	512	Open in IMG/M
3300029984\|Ga0311332_10637857	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300029989\|Ga0311365_10529971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1021	Open in IMG/M
3300030002\|Ga0311350_10539317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1048	Open in IMG/M
3300030294\|Ga0311349_10287757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1551	Open in IMG/M
3300031918\|Ga0311367_11218844	Not Available	746	Open in IMG/M
3300032164\|Ga0315283_10756007	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium	1044	Open in IMG/M
3300032256\|Ga0315271_11789351	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300032420\|Ga0335397_10280995	Not Available	1496	Open in IMG/M
3300032782\|Ga0335082_10030614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	5711	Open in IMG/M
3300032955\|Ga0335076_11003684	Not Available	717	Open in IMG/M
3300033413\|Ga0316603_10927619	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300033418\|Ga0316625_100010708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3187	Open in IMG/M
3300033482\|Ga0316627_102217600	Not Available	574	Open in IMG/M
3300033483\|Ga0316629_10974546	Not Available	664	Open in IMG/M
3300034126\|Ga0370486_008598	Not Available	2230	Open in IMG/M
3300034127\|Ga0370489_0201280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300034150\|Ga0364933_195678	Not Available	531	Open in IMG/M
3300034169\|Ga0370480_0277932	Not Available	564	Open in IMG/M
3300034195\|Ga0370501_0035091	Not Available	1544	Open in IMG/M
3300034354\|Ga0364943_0369382	Not Available	551	Open in IMG/M
3300034691\|Ga0370488_046139	Not Available	1294	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.20%
Host-Associated	Host-Associated	39.67%
Engineered	Engineered	4.13%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	39.67%
Terrestrial	Environmental → Terrestrial	29.75%
Aquatic	Environmental → Aquatic	26.45%
Wastewater	Engineered → Wastewater	4.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	23.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.14%
Freshwater	Environmental → Aquatic → Freshwater	16.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.70%
Sediment	Environmental → Aquatic → Sediment	8.26%
Peat	Environmental → Terrestrial → Peat	4.96%
Marine	Environmental → Aquatic → Marine	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.65%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.65%
Roots	Host-Associated → Plants → Roots	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.83%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.26%
Ice	Environmental → Aquatic → Freshwater → Ice	4.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.13%
Lake	Environmental → Aquatic → Freshwater → Lake	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.65%
Sand	Environmental → Terrestrial → Soil → Sand	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.83%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.83%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.44%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	4.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.96%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.92%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.96%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	4.13%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.48%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.65%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.83%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.83%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	0.83%
Sewage Treatment Plant	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004079	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013769	Sewage treatment plant microbial communities from Vermont, USA - Sand_B	Engineered	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027547	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034691	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072417

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_08629190	2124908008	Soil	MDSELSPKAGQRPDDARLRSANVRTALVLASIAAVFFVGIVVAKFVGDTSTGMAVLGAAVLLFLVVAIGRNLRK
F14TC_1010319262	3300000559	Soil	MPTAPSPKTGPRADDARLRSANVRTAIVLVSIAAVFFVGILVAKFVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0055514_101904732	3300004079	Natural And Restored Wetlands	MGVTMATGDDGKDAAERLKRTNVRTALVLASIAAVFFAGILAAKMLGDPVTGMSVLGVAVLIFLVFAIGRNLKK*
Ga0055514_102090081	3300004079	Natural And Restored Wetlands	MATDVTPAGDPGAPDPRVRRANVRTALVLASIAAVFFLGIVFAKYMGDGSTGMTVLGAGVLLFLVLAIGRNLRK*
Ga0070670_1000374687	3300005331	Switchgrass Rhizosphere	VATQAQQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR*
Ga0068869_1000321152	3300005334	Miscanthus Rhizosphere	MPAAPSPKPGHRADDAQLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0070668_1001627311	3300005347	Switchgrass Rhizosphere	DDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0070675_1004781993	3300005354	Miscanthus Rhizosphere	RRITRSRPRRSSSNVAAQASPKAVDPRVRRANVRTAVVLATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLCLAIGRNLIGGRRR*
Ga0070675_1017715541	3300005354	Miscanthus Rhizosphere	VNAKHTPATSDPRLRTANRRTAFVLASIAVVFFFGIMFARFMGDGDSGMTVLGIAVLLFLGIAIGRNLWKGNKS*
Ga0070671_1018892512	3300005355	Switchgrass Rhizosphere	MMDSPSRMDDTRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNL
Ga0070667_1000015552	3300005367	Switchgrass Rhizosphere	MPAAPSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0070665_1005070233	3300005548	Switchgrass Rhizosphere	VPTPQGQGHQPSRQERLRAANVRTAFVLFTIALVFFFGILFARYMGDGDSGMTVLGVAVLLFLGLAIGRNLIKGRNS*
Ga0070665_1020957952	3300005548	Switchgrass Rhizosphere	VRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0068854_1011140572	3300005578	Corn Rhizosphere	MPAAPSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNL
Ga0068859_1012539182	3300005617	Switchgrass Rhizosphere	MTESPGRLDDARVRTANKRTALVLASIAVVFFLGIVFAKFIGDGESGMTVLGVAVLLFLGLAIGRNLRK*
Ga0068863_1000137303	3300005841	Switchgrass Rhizosphere	MTESPGRVDDARVRTANKRTALVLASIAVVFFLGIVFAKFIGDGESGMTVLGVAVLLFLGLAIGRNLRK*
Ga0068863_1000706265	3300005841	Switchgrass Rhizosphere	VAAQASPKAVDPRVRRANVRTAVVLATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLCLAIGRNLIGGRRR*
Ga0068863_1013700472	3300005841	Switchgrass Rhizosphere	MTDSPSRLDDPRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0068858_1002892222	3300005842	Switchgrass Rhizosphere	MMDSPSRMDDTRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0068860_1003103221	3300005843	Switchgrass Rhizosphere	MMSELSRKPGNRAADPRLRSANVRTAIVLASIAAVFFVGIVVAKFVGDASTGMSVLGAAVLLFLVLAIGRNLRK*
Ga0073913_100199781	3300005940	Sand	MASDSSMHATQRRSNIRTALVLASIAVAFFVGILATRFIGDGQNGITVLGAAVMFFLVIAIGRNLRK*
Ga0075028_1010931302	3300006050	Watersheds	PDARLRSANVRTALVLAAIALVFFLGIMVAKFTGDATTGMTVLGAAVILFLVVAIGRNIRK*
Ga0075163_109992682	3300006056	Wastewater Effluent	VTAKPEPSTSPERVRAANVRTALVLASIAIVFFFGIMFARYMGDGETGITVLGVAVMLFLGLAIGRNLWKGRQS*
Ga0075163_119862781	3300006056	Wastewater Effluent	MAEQGERKDAAERLKRANKRTALVLASIAAVFFAGILAAKLLGDPVTGMSVLGVAVLIFLVFAIGRNLRK*
Ga0075026_1004334342	3300006057	Watersheds	MTTDSSAQSSQRRANVRTALVLASIAIAFFIGILATRFIGDGQNGITVLGAAVMFFLVIAIGRNLRK*
Ga0075021_104206092	3300006354	Watersheds	MSTDLSPVPESRALDARLRRANVRTALVLAAIALVFFLGIVFAKYMGDAASGMAVLGAAVVLFLVVAIGRNLRK*
Ga0075521_100477722	3300006642	Arctic Peat Soil	MSADLTPVPEDRAPDARLRSANVRTALVLAAIALVFFVGIVFAKFTGDAASSMTVLGAAVLLFLVVAIGRNLRK*
Ga0075434_1002616992	3300006871	Populus Rhizosphere	MAEKTDLRAANKRTALVLASIALVFFLGIMFAKYMGDADSGMTVLGAAVLLFLALAIGRSLRK*
Ga0105044_102058512	3300007521	Freshwater	MTTESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGITVLGGAVLLFLILAIGRNLRK*
Ga0105049_100783733	3300007799	Freshwater	MTTESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGINVLGGAVLLFLILAIGRNLRK*
Ga0105048_100182784	3300009032	Freshwater	MTAESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGITVLGGAVLLFLILAIGRNLRK*
Ga0105250_105544452	3300009092	Switchgrass Rhizosphere	LDDARVRTANKRTALVLASIAVVFFLGIVFAKFIGDGESGMTVLGVAVLLFLGLAIGRNLRK*
Ga0111539_115015152	3300009094	Populus Rhizosphere	RVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAPVLLFLVLAIGRNLISGRRR*
Ga0075418_110448241	3300009100	Populus Rhizosphere	SPKAGHRADDARLRNANVRTAIVLASIAAVFFVGIVVAKFIGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0115027_101193063	3300009131	Wetland	MATDMTPARDAAAPAARVRRTNVRTALVLASIAVVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK*
Ga0105243_101817763	3300009148	Miscanthus Rhizosphere	APSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0113563_103569401	3300009167	Freshwater Wetlands	MATDMTPARDAAAPDARVRRTNVRTALVLASIAVVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK*
Ga0114942_10804802	3300009527	Groundwater	MATTPIRDDAGARVRRANVRTALVLASIALVFFIGILAAKFMGDTSTGMTVLGSAVLLFLALAIGRNLRR*
Ga0114942_12309802	3300009527	Groundwater	MTTSTQDTSVQRRANRRTALVLASIALVFFVGILATRFIGDGSTGISVLGGAVLLFLILAIGRNLRR*
Ga0131092_105760802	3300009870	Activated Sludge	MTQRDDLRAANKRTALALASIALVFFLGIVFAKWMGDGDSGMTVLGVAVLLFLVFAVVRSIRK*
Ga0133939_100925039	3300010051	Industrial Wastewater	MTDTKSTPRSPDQRLRTANTRTALVLASIAVVFFFGIMFARYMGDGESGMTVLGIAVLLFLGLAIGRNLWKARKP*
Ga0134121_123639171	3300010401	Terrestrial Soil	MMSELSRKDGNRADPRLRSANVRTAIVLASIAAVFFVGIVVAKFVGDASTGMSVLGAAVLLFLVLAIGRNLRK*
Ga0134123_100529682	3300010403	Terrestrial Soil	MPAAPSPKPGHRADDARLRSANVRTAIVLVSIASVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0137451_11604072	3300011438	Soil	MTTAPAPKAGHRADPARLRSANVRTAIVLASIAAVFFVGIVVAKFVGDTSTGMAVLGAAVLLFLVVAIGRNLRK*
Ga0157374_112167991	3300013296	Miscanthus Rhizosphere	MPAAPSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVASGRNLRK*
Ga0163162_115901641	3300013306	Switchgrass Rhizosphere	MPAAPSPKPGHRADDARLRSANVRTAIVLWSIASVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK*
Ga0163162_126651741	3300013306	Switchgrass Rhizosphere	PRLRATNRRTALVLASIAVVFFFGIMFARFMGDGESGMTVLGIAVLLFLGFAIGRNLWKGNKS*
Ga0119887_10078753	3300013769	Sewage Treatment Plant	MNADGNPVREDGQRDAQLRNANVRTAIVLASIALVFFAGIVFAKFVGDASTGMTVLGAAVLLFLVLAIGRNLRK*
Ga0163163_103426412	3300014325	Switchgrass Rhizosphere	MTNSPSRLDDTRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0182019_102284632	3300014498	Fen	MSADLTPVPEDRAPDARLRSANVRTALVLATIALVFFVGIVFAKFTGDAASSMTVLGAAVLLFLVVAIGRNLRK*
Ga0157379_103008953	3300014968	Switchgrass Rhizosphere	DSPSRMDDSRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0157379_121301971	3300014968	Switchgrass Rhizosphere	SSNVAAQASPKAVDPRVRRANVRTAVVLATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLCLAIGRNLIGGRRR*
Ga0157376_105787372	3300014969	Miscanthus Rhizosphere	MMDSPGRLDDTRLRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK*
Ga0187785_102339142	3300017947	Tropical Peatland	MAQAPDKPEVRSANLRTALLLASIALVFFVGIIFAKLTGDTSTGMTVLGAAVLLFLVLAIGRSLRRK
Ga0184638_10359723	3300018052	Groundwater Sediment	MMSDLSSKAVHGHADARLRSTNVRTAIVLASIAAVFFVGIVVAKLVGDTSTAMSVLGAAVLLFLVLAIGRNLRK
Ga0184635_102930201	3300018072	Groundwater Sediment	MDSDPSPNAGQRAVDTRLRRANVRTALVLASIAAVFFVGIVVAKFIGDTSTGMTVLGAAVLLFLVVAIGR
Ga0184629_103633502	3300018084	Groundwater Sediment	MNSNLSSKTGQRTVDTRLRSANVRTALVLASIAAVFFVGIVVAKFVGDTATGMTVLGAAVLLFLVLAIGRNLRK
Ga0184629_105775962	3300018084	Groundwater Sediment	MDSDLSPNAGQRAADTRLRRANVRTALVLASIAAVFFVGIIASKVMGDPRTGIGVLGGAVLLYLLVAIGRNLRDRR
Ga0190270_114581212	3300018469	Soil	VAAQSPPKTVDPRVRRANVRTAVILASIAVIFFVGIIFAKYVGDASTGMTVLGAAVLLFLALAIGRNLIGGGRR
Ga0190274_105605002	3300018476	Soil	VNAKHTPATSDPRLRAANRRTALVLASIAVVFFFGIMFARFVGDGESGMTVLGIAVLLFLGGAIGRNLWKGNKS
Ga0190271_105571052	3300018481	Soil	MVPPNLRDDAGARVRRANVRTALVLASIALVFFIGILAAKFMGDTSTGMTVLGSAVLLFLALAIGRNLRR
Ga0190271_113227262	3300018481	Soil	VNARNTPATSDPRLRASNRRTALVLASIAVVFFFGIMFARFMGDGESGMTVLGIAVLLFLGFAIGRNLWKGHRS
Ga0193745_11191941	3300020059	Soil	MPTAPSPKTGPRADDARLRSANVRTALVLVSIAAVFFVGILVAKFIGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0163153_100284425	3300020186	Freshwater Microbial Mat	MTTESHDRSEQQRRSNVRTAIVLASVALVFFVGILATRFIGDGRSGITVLGGAVMLFLVLAIGRNLRK
Ga0212091_102762922	3300022549	Groundwater	MATTPIRDDAGARVRRANVRTALVLASIALVFFIGILAAKFMGDTSTGMTVLGSAVLLFLALAIGRNLRR
Ga0222622_101930823	3300022756	Groundwater Sediment	SANVRTAMVLLSIAAVFFVGIVVAKFIGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207697_104694722	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPAAPSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207680_100673774	3300025903	Switchgrass Rhizosphere	MPAAPSPKPGHRADDAQLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207671_111168461	3300025914	Corn Rhizosphere	APSPKPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207662_112483622	3300025918	Switchgrass Rhizosphere	REPEARTAIVLVSIAAVFFVGILVAKFVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207681_114858352	3300025923	Switchgrass Rhizosphere	VATQAPQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFL
Ga0207650_105514151	3300025925	Switchgrass Rhizosphere	VATQAQQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFL
Ga0207650_108545151	3300025925	Switchgrass Rhizosphere	ANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR
Ga0207701_111389021	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR
Ga0207704_108017032	3300025938	Miscanthus Rhizosphere	APSPRPGHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207691_101966081	3300025940	Miscanthus Rhizosphere	GHRADDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0207691_102630862	3300025940	Miscanthus Rhizosphere	VATQAPQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLIGGRRR
Ga0207689_102459651	3300025942	Miscanthus Rhizosphere	NVATQAPQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR
Ga0207651_121037191	3300025960	Switchgrass Rhizosphere	PQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR
Ga0207668_101364341	3300025972	Switchgrass Rhizosphere	DDARLRSANVRTAIVLVSIAAVFFVGILVAKLVGDTSTGMTVLGAAVLLFLVVAIGRNLR
Ga0207668_102285692	3300025972	Switchgrass Rhizosphere	VATQAQQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLVLAIGRNLISGRRR
Ga0207703_123373102	3300026035	Switchgrass Rhizosphere	MDSPSRMDDTRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK
Ga0207641_100841215	3300026088	Switchgrass Rhizosphere	VATQAQQRNADPRVRRANVRTAVILATIALVFFVGIIFAKYVGDASTGMTVLGAAVLLFLCLAIGRNLIGGRRR
Ga0207641_101213032	3300026088	Switchgrass Rhizosphere	MTESPGRLDDARVRTANKRTALVLASIAVVFFLGIVFAKFIGDGESGMTVLGVAVLLFLGLAIGRNLRK
Ga0207641_107977082	3300026088	Switchgrass Rhizosphere	MTDSPSRLDDPRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGVAVLLFLALAIGRNLRK
Ga0209864_10597271	3300027547	Sand	RDRREHQRRSNIRTALVLASIAVAFFVGILATRFIGDGQNGITVLGAAVMFFLVIAIGRNLRK
Ga0209490_101034492	3300027823	Freshwater	MTTESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGINVLGGAVLLFLILAIGRNLRK
Ga0209591_101294873	3300027850	Freshwater	MTTESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGITVLGGAVLLFLILAIGRNLRK
Ga0209023_100510185	3300027870	Freshwater And Sediment	MGVTMATGDDGKDAAERLKRTNVRTALVLASIAAVFFAGILAAKMLGDPVTGMSVLGVAVLIFLVFAIGRNLKK
Ga0209397_101053381	3300027871	Wetland	SSRRRGDSMATDMTPARDAAAPAARVRRTNVRTALVLASIAVVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK
Ga0209450_101363703	3300027885	Freshwater Lake Sediment	VPTKSANARTALVLASVAVVFFFGIMFAKFMGDVSTGMSVLGAAVLLFLLVAIGRNLIRK
Ga0209450_103328762	3300027885	Freshwater Lake Sediment	MTTWPPKAPQQAVPTKSANARTALVLASVAVVFFFGIMFAKFMGDVSTGMSVLGAAVLLFLLVAIGR
Ga0209450_103456392	3300027885	Freshwater Lake Sediment	MATDVTPAGDPGAPDARMRRANVRTALVLASIAVVFFLGIVFAKFMGDGSTGMTVLGAGVLLFLVLAIGRNLRK
Ga0209068_108643711	3300027894	Watersheds	TDLSPVPESRALDARLRRANVRTALVLAAIALVFFLGIVFAKYMGDAASGMAVLGAAVVLFLVVAIGRNLRK
Ga0209254_103495882	3300027897	Freshwater Lake Sediment	MATDVTSARDPGATDARVRRANVRTALVLASIAVVFFLGIVFAKYMGDGSTGMTVLGAGVLLFLVLAIGRNLRK
Ga0268266_105017432	3300028379	Switchgrass Rhizosphere	VPTPQGQGHQPSRQERLRAANVRTAFVLFTIALVFFFGILFARYMGDGDSGMTVLGVAVLLFLGLAIGRNLIKGRNS
Ga0268265_100525701	3300028380	Switchgrass Rhizosphere	RVDARVRTANKRTALVLASIAVVFFLGIVFAKFIGDGESGMTVLGVAVLLFLGLAIGRNLRK
Ga0268264_105763082	3300028381	Switchgrass Rhizosphere	MMDSPSRMDDSRVRTANKRTALVLASIALVFFLGIVFAKFIGDGESGMTVLGAAVLLFLALAIGRNL
Ga0302258_11483612	3300028770	Fen	MAADLSRRDESDAAATRLRSANMRTAIVGDAATGMTVLGAAVLLFLVVAIGRNLRK
Ga0307302_106777821	3300028814	Soil	MTTAPSPKPGHRADGARLRSANVRTALVLASIAAVFFIGIVVAKFIGDTSTGMTVLGAAVLLFLVVAIGRNLRK
Ga0311332_106378572	3300029984	Fen	EAPMAADLSRRDESDAAATRLRSANMRTAFVLAAIAAVFFVGILVAKFVGDAATGMTVLGAAVLLFLVVAIGRNLRK
Ga0311365_105299712	3300029989	Fen	MAADLSRRDESDAAATRLRSANMRTAFVLAAIAAVFFVGILVAKFVGDAATGMTVLGAAVLLFLVVAIGRNLRK
Ga0311350_105393173	3300030002	Fen	LSRRDESDAAATRLRSANMRTAFVLAAIAAVFFVGILVAKFVGDAATGMTVLGAAVLLFLVVAIGRNLRK
Ga0311349_102877571	3300030294	Fen	AATRLRSANMRTAFVLAAIAAVFFVGILVAKFVGDAATGMTVLGAAVLLFLVVAIGRNLR
Ga0311367_112188441	3300031918	Fen	MAVTMAPEPERNAEAQRVRRANVRTALALASIALVFFLGILLAKFLGDASTGMTVLGFAVLLFLVFAIGRNLRK
Ga0315283_107560071	3300032164	Sediment	MATDVTPAGDPGAPDARVRRANVRTALVLASIAVVFFLGIVFAKYMGDGSTGMTVLGAGVLLFLVLAIGRNLRK
Ga0315271_117893512	3300032256	Sediment	PDMAPDSNLQSAQRRANIRTALVLASIAIAFFIGILATRFIGDGQSGITVLGAAVMFFLVIAIGRNLRK
Ga0335397_102809952	3300032420	Freshwater	MTAESHDRSAQLRRSNVRTALVLASVALVFFVGILATRFIGDGQSGITVLGGAVLLFLILAIGRNLRK
Ga0335082_100306143	3300032782	Soil	MPRAPDQQKLRSANLRTAIVLASIALVFFVGIIFAKLTGDTSTGMTVLGAAVLLFLLLAIGRSVRRK
Ga0335076_110036842	3300032955	Soil	MAHKADLRAANRRTALVLASIALVFFFGIVFAKYMGDADSGMTVLGVAVLAFLAFAIVRSIGK
Ga0316603_109276192	3300033413	Soil	TPAGEPGAPDPRVRRANVRTALVLASIALVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK
Ga0316625_1000107083	3300033418	Soil	MATDMTPARDAAAPDARVRRTNVRTALVLASIAVVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK
Ga0316627_1022176001	3300033482	Soil	MTTWPPKAPQQAVPTKSANARTALVLASVAVVFFFGIMFAKFMGDVSTGMSVLGAAVLLFLLVAIGRNLIRK
Ga0316629_109745461	3300033483	Soil	MATDMTPARDAAAPAARVRRTNVRTALVLASIAVVFFLGIVFAKFMGDGSSGMTVLGAGVLLFLVLAIGRNLRK
Ga0370486_008598_303_506	3300034126	Untreated Peat Soil	MASDNTAQSSQRRANVRTALVLASIAVTFFAGILATRFIGDGRNGITVLGAAVMFFLVIAIGRNLRK
Ga0370489_0201280_150_353	3300034127	Untreated Peat Soil	MATDNTAQSSQRRANVRTALVLASIAVTFFAGILATRFIGDGRNGITVLGAAVMFFLVIAIGRNLRK
Ga0364933_195678_3_227	3300034150	Sediment	MESNLSPNAGQRAADPRLRRANVRTALVLASIAAVFFVGIVVAKFVGDTSTGMAVLGAAVLLFLVVAIGRNLRK
Ga0370480_0277932_340_558	3300034169	Untreated Peat Soil	MPTTPAPQPAQDPRTRRANGRTALVLLSVAVVFFFGIVFAKFMGEGSTGMTVLGGGVLLFLLVAIGRNIIRK
Ga0370501_0035091_947_1171	3300034195	Untreated Peat Soil	MSTDLTPVPEDRAPDARLRSANVRTALVLAAIALVFFVGIVFAKFTGDAASSMTVLGAAVLLFLVVAIGRNLRK
Ga0364943_0369382_356_550	3300034354	Sediment	QRAVDARLRRANVRTALVLASIAAVFFVGIVVAKFVGDTSTGMAVLGAAVLLFLVVAIGRNLRK
Ga0370488_046139_9_227	3300034691	Untreated Peat Soil	MPTTPAPQPAQDPRTRRANVRTALVLLSIAVVFFFGIVFAKYMGEGSTGMTVLGAAVLLFLLVAIGRNILRK

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign