Metagenome / Metatranscriptome Family F072385

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072385
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	75 residues
Representative Sequence	VLGKNLRENDPKILQETYDFWLKVFPRVPTPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Number of Associated Samples	109
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	94.21 %
% of genes from short scaffolds (< 2000 bps)	90.08 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.876 % of family members)
Environment Ontology (ENVO)	Unclassified (31.405 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13343	SBP_bac_6	29.75
PF09084	NMT1	7.44
PF04392	ABC_sub_bind	1.65
PF13379	NMT1_2	1.65
PF01977	UbiD	0.83
PF01244	Peptidase_M19	0.83
PF02371	Transposase_20	0.83
PF06912	DUF1275	0.83
PF01315	Ald_Xan_dh_C	0.83
PF05685	Uma2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.44
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.44
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.65
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.83
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	0.83
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	74.38 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	68.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	68.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	68.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	68.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1054585	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300000955\|JGI1027J12803_100886443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	957	Open in IMG/M
3300000955\|JGI1027J12803_102832844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1356	Open in IMG/M
3300000956\|JGI10216J12902_107006037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300004114\|Ga0062593_101383134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300005293\|Ga0065715_10468037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	809	Open in IMG/M
3300005330\|Ga0070690_101672037	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300005335\|Ga0070666_10768809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300005406\|Ga0070703_10390941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300005434\|Ga0070709_11447826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300005454\|Ga0066687_10034251	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300005455\|Ga0070663_100594345	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300005530\|Ga0070679_101910442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005536\|Ga0070697_101085590	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005549\|Ga0070704_100868150	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300005549\|Ga0070704_101684879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300005614\|Ga0068856_102536288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300005713\|Ga0066905_101359344	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005719\|Ga0068861_100744268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	915	Open in IMG/M
3300006049\|Ga0075417_10000885	All Organisms → cellular organisms → Bacteria	7576	Open in IMG/M
3300006049\|Ga0075417_10519795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	599	Open in IMG/M
3300006358\|Ga0068871_102206717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300006791\|Ga0066653_10601318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300006796\|Ga0066665_10342843	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300006804\|Ga0079221_11490201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300006844\|Ga0075428_101001736	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	884	Open in IMG/M
3300006844\|Ga0075428_101349765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300006854\|Ga0075425_101776213	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
3300006871\|Ga0075434_100031665	All Organisms → cellular organisms → Bacteria	5214	Open in IMG/M
3300006871\|Ga0075434_100071326	All Organisms → cellular organisms → Bacteria	3465	Open in IMG/M
3300006914\|Ga0075436_100924312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	653	Open in IMG/M
3300009012\|Ga0066710_103909941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300009031\|Ga0103682_10441387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300009089\|Ga0099828_12020005	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009093\|Ga0105240_11475976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300009147\|Ga0114129_10560239	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300009156\|Ga0111538_10004696	All Organisms → cellular organisms → Bacteria	18868	Open in IMG/M
3300009156\|Ga0111538_10163954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2823	Open in IMG/M
3300009157\|Ga0105092_10520255	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009162\|Ga0075423_11297756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300009792\|Ga0126374_11172183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300009792\|Ga0126374_11666608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300010047\|Ga0126382_11895454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300010048\|Ga0126373_11811561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300010325\|Ga0134064_10009610	All Organisms → cellular organisms → Bacteria → Proteobacteria	2572	Open in IMG/M
3300010333\|Ga0134080_10049450	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300010358\|Ga0126370_10820041	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300010360\|Ga0126372_11294830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	757	Open in IMG/M
3300010362\|Ga0126377_13002403	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300010366\|Ga0126379_11022172	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300010366\|Ga0126379_12476686	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300010376\|Ga0126381_103586344	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010398\|Ga0126383_13216712	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010399\|Ga0134127_11328952	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300012122\|Ga0137332_1038245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300012179\|Ga0137334_1092694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	677	Open in IMG/M
3300012202\|Ga0137363_11137686	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300012204\|Ga0137374_10016252	All Organisms → cellular organisms → Bacteria → Proteobacteria	8551	Open in IMG/M
3300012205\|Ga0137362_10293920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1406	Open in IMG/M
3300012210\|Ga0137378_10120303	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2423	Open in IMG/M
3300012349\|Ga0137387_10627950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	778	Open in IMG/M
3300012354\|Ga0137366_11143056	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300012497\|Ga0157319_1021140	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300012532\|Ga0137373_10375928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1109	Open in IMG/M
3300012908\|Ga0157286_10480593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300012948\|Ga0126375_10670669	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012957\|Ga0164303_10998312	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300012971\|Ga0126369_10764791	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300013100\|Ga0157373_10462129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	914	Open in IMG/M
3300013308\|Ga0157375_12532192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300014325\|Ga0163163_13216895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	509	Open in IMG/M
3300014878\|Ga0180065_1107673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300014969\|Ga0157376_10246754	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300015201\|Ga0173478_10428075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300015242\|Ga0137412_10922707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300017792\|Ga0163161_11863828	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300017944\|Ga0187786_10187464	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300018032\|Ga0187788_10183912	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300018068\|Ga0184636_1329164	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	535	Open in IMG/M
3300018072\|Ga0184635_10046634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300018074\|Ga0184640_10314423	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300018084\|Ga0184629_10243706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	938	Open in IMG/M
3300018084\|Ga0184629_10473127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300018084\|Ga0184629_10715945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300018431\|Ga0066655_10883318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300018481\|Ga0190271_12407132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300019360\|Ga0187894_10473897	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300019881\|Ga0193707_1054309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1271	Open in IMG/M
3300021088\|Ga0210404_10918695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300022756\|Ga0222622_10956842	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300025155\|Ga0209320_10135608	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1105	Open in IMG/M
3300025315\|Ga0207697_10182193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	921	Open in IMG/M
3300025796\|Ga0210113_1070209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300025893\|Ga0207682_10437245	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	619	Open in IMG/M
3300025914\|Ga0207671_11043841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300025916\|Ga0207663_10902869	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300025919\|Ga0207657_10879972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300025923\|Ga0207681_10613880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	899	Open in IMG/M
3300025926\|Ga0207659_11176967	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300025934\|Ga0207686_10172397	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300025936\|Ga0207670_10228502	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300026536\|Ga0209058_1062224	All Organisms → cellular organisms → Bacteria → Proteobacteria	2050	Open in IMG/M
3300027873\|Ga0209814_10021905	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2597	Open in IMG/M
3300027880\|Ga0209481_10289889	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300027880\|Ga0209481_10762997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300027907\|Ga0207428_10210096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1462	Open in IMG/M
3300027909\|Ga0209382_10386167	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300027909\|Ga0209382_11409700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300031198\|Ga0307500_10245711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300031716\|Ga0310813_12386626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300031890\|Ga0306925_10693978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1066	Open in IMG/M
3300031941\|Ga0310912_10249496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1366	Open in IMG/M
3300031945\|Ga0310913_11220448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300032013\|Ga0310906_10367970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300032059\|Ga0318533_10626773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	789	Open in IMG/M
3300032174\|Ga0307470_10614147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	815	Open in IMG/M
3300032211\|Ga0310896_10323507	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	804	Open in IMG/M
3300032421\|Ga0310812_10110276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1140	Open in IMG/M
3300032828\|Ga0335080_11252538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300034151\|Ga0364935_0014251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2070	Open in IMG/M
3300034417\|Ga0364941_077788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.59%
Host-Associated	Host-Associated	31.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.85%
Plants	Host-Associated → Plants	31.41%
Aquatic	Environmental → Aquatic	10.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.79%
Sediment	Environmental → Aquatic → Sediment	8.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Roots	Host-Associated → Plants → Roots	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Cave	Environmental → Terrestrial → Cave	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.26%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Chlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009031	Microbial communities from groundwater in Rifle, Colorado, USA - 3D_0.1um	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012122	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT200_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10545852	3300000837	Forest Soil	RETDPKILQKTYDFWLKVFPKVPYPGPEDATVFLDFMQVKEPRDWKDFVDTSLMDEIEREGFLSSVYK*
JGI1027J12803_1008864431	3300000955	Soil	TDRDFGSKVLGKNLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMQVKEQRDWKDFVDTSLMEELEREGFLTAVYR*
JGI1027J12803_1028328441	3300000955	Soil	TDRDFGSKVLGKNLRETDPKILQETYDFWLKVFPKVPHPGPEDATVFLEFMQVKEHRDWKDFVDTSLMDELEREGFVAAVYR*
JGI10216J12902_1070060372	3300000956	Soil	LQETYDFWLKVFPRIPNPGPEDATVFLEFMQIKEQRDWKEFVDTSVMDELDREGFIAGVYK*
Ga0062593_1013831342	3300004114	Soil	RVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK*
Ga0065715_104680371	3300005293	Miscanthus Rhizosphere	EFGARVLGKNLRETDPKILQETYDFWLKVFPRVPHPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK*
Ga0070690_1016720371	3300005330	Switchgrass Rhizosphere	RVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEHRDWRDFVDTSVMDELQQEGFLNSVYK*
Ga0070666_107688091	3300005335	Switchgrass Rhizosphere	ARFRTDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0070703_103909412	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	YDFWLKVFPRVPHPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK*
Ga0070709_114478262	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LGQNLRETDPKILQETYDFWLKVFPKIPNPGPEDATVFLEFMQVKEQRDWKDFVDPSLMEELERDGFLSSVYK*
Ga0066687_100342513	3300005454	Soil	ETDPKILQDIYDFWLKVFPKVPYPGPEDATVFLEFMQVKESRNWKDFVDTSLMEELEREGFLASVYK*
Ga0070663_1005943451	3300005455	Corn Rhizosphere	FMRAFVAGLARFRTDREFGARLLGKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK*
Ga0070679_1019104421	3300005530	Corn Rhizosphere	RETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK*
Ga0070697_1010855902	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AFIAGLARFRTDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0070704_1008681502	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EFGARVLGKNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK*
Ga0070704_1016848791	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0068856_1025362881	3300005614	Corn Rhizosphere	LQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK*
Ga0066905_1013593441	3300005713	Tropical Forest Soil	FLKGLVAGLARFRTDREFGVKVLGQNLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLDFMQVKESRDWKDFVDISLMDEIEREGFLSSVYR*
Ga0068861_1007442681	3300005719	Switchgrass Rhizosphere	ETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0075417_100008851	3300006049	Populus Rhizosphere	LRETDTKILQETYEFWLKVFPKIPNPGPEDATVFLEFMQIKEQRDWKEFVDPSLMEELERDGFLSSVYK*
Ga0075417_105197953	3300006049	Populus Rhizosphere	LRETDTKILQETYEFWLKVFPKIPNPGPEDATVFLEFMQIKEQRDWKEFVDPSLMKELEHDGFLSSVYK*
Ga0068871_1022067171	3300006358	Miscanthus Rhizosphere	ENDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK*
Ga0066653_106013182	3300006791	Soil	FGVRVLGKNLRETDPKILQETYDFWLKVFPKVPYPGPEDATVFLEFMQVEESRGWKDFVDTSLMEELEREGFLASVYK*
Ga0066665_103428431	3300006796	Soil	MKGFVAGLARFRTDREFGAKVLGKNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQHDWREFVDTSVMDELAREGFLSSVYK*
Ga0079221_114902011	3300006804	Agricultural Soil	LGKNLKENDPKILQETYDFWWKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0075428_1010017361	3300006844	Populus Rhizosphere	TYDFWLKVFPRVPNPGPEDATVFLELMQIKEQRDWREFVDTSVMDELTREGFLNNVYK*
Ga0075428_1013497652	3300006844	Populus Rhizosphere	MKGFVAGLARFRTDREFGARVLGKNLRETDAKILQETYDFWLKVFPRIPNPGPEDATVFLEFMQIKEQRDWKEFVDTSVMDELDREGFIAGVYK*
Ga0075425_1017762132	3300006854	Populus Rhizosphere	KNLRETDPKILQETYDFWLKVFPKTPNPGPEDATVFLEFMQIKEQHDWKEFVDTSLMNDLDREGFLASVYK*
Ga0075434_1000316658	3300006871	Populus Rhizosphere	TYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK*
Ga0075434_1000713265	3300006871	Populus Rhizosphere	ILQETYEFWLKVFPKIPNPGPEDATVFLEFMQIKEQRDWKEFVDPSLMEELERDGFLSSVYK*
Ga0075436_1009243122	3300006914	Populus Rhizosphere	KILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK*
Ga0066710_1039099412	3300009012	Grasslands Soil	GKNLRETDPKILQDTYDFWLKVFPKVPYPGPEDAMVFLEFMQVKELRDWKDFVDTSLMEELDREGFLSSIYK
Ga0103682_104413872	3300009031	Groundwater	REKDTRILQETYEFWLKVFPKIPYPGPEDATVFLEFMQVKAQHDPKEFVDGTLIQELEREGFVDSVYRER*
Ga0099828_120200051	3300009089	Vadose Zone Soil	IKVLSKNLRETDAKTLDETYDFWLKVFPKVPLPGPEDATAFLELMEVKERHEPKEFVDFSIMEDLEREGFLATLYR*
Ga0105240_114759761	3300009093	Corn Rhizosphere	HLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0114129_105602391	3300009147	Populus Rhizosphere	NLRETDTKILQETYEFWLKVFPKIPNPGPEDATVFLEFMQIKEQRDWKEFVDPSLMEELERDGFLSSVYK*
Ga0111538_1000469617	3300009156	Populus Rhizosphere	FGARVLGKNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQRDWREFVDTSVMDELAREGFLSSIYK*
Ga0111538_101639544	3300009156	Populus Rhizosphere	YDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK*
Ga0105092_105202552	3300009157	Freshwater Sediment	ILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWKDFVDTSLMDELERESFLSSVYK*
Ga0075423_112977561	3300009162	Populus Rhizosphere	TKVLAKNLRETDPKILQETYDFWLKVFPKTPNPGPEDATVFLEFMQIKEQHDWKEFVDTSLMNDLDREGFLASVYK*
Ga0126374_111721832	3300009792	Tropical Forest Soil	REFGSRVLAKNLKENDAKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNGVYK*
Ga0126374_116666082	3300009792	Tropical Forest Soil	LRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMHVKESRDWKEFVDTSLMEELDREGFLNSVYR*
Ga0126382_118954541	3300010047	Tropical Forest Soil	TVKSFLKGLVAGLARFRTDREFGVKVLGQNLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMQVKESRDWKDFVDTSLMEELDREGFLNSVYR*
Ga0126373_118115612	3300010048	Tropical Forest Soil	VLAKNLKENDAKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNNVYK*
Ga0134064_100096101	3300010325	Grasslands Soil	YDFWLKVFPKVPYPGPEDATVLLEFMQVKESRNWKDFVDTSLMEELEREGFLASVYK*
Ga0134080_100494501	3300010333	Grasslands Soil	QDTYDFWLKVFPKVPYPGPEDATVFLEFMQVKESRNWKDFVDTSLMEELEREGFLASVYK
Ga0126370_108200411	3300010358	Tropical Forest Soil	ETYDFWLKVFPKVPYPGPEDATVFLDFMQVKEPRDWKDFVDTSLMDEIEREGFLSSVYK*
Ga0126372_112948301	3300010360	Tropical Forest Soil	KVLGKNLRETDGKILQETYDFWLKVFPKVPNPGPEDATVFLELMQVKEQRDWKEFVDTSLMEELEREGFLASVYR*
Ga0126377_130024031	3300010362	Tropical Forest Soil	AGLARFRTDRESGVKVLGQNLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMQVKESRDWKEFVDTSLMEELDREGFFNSVYR*
Ga0126379_110221722	3300010366	Tropical Forest Soil	LQETYDFWLKVFPKVPYPGPEDATVFLEFMQVTEARDWKDFVDTSLMDEIEREGFLSSVYK*
Ga0126379_124766862	3300010366	Tropical Forest Soil	DFWLKVFPKVPYPGPEDATVFLEFMQVKESRDWKDFVDTSLMEELDREGFLNSVYR*
Ga0126381_1035863442	3300010376	Tropical Forest Soil	QETYDFWLKVFPKVPYPGPEDATVFLEFMQVKEPRDWKHFVDTSLMDEIEREGFLSSVYK
Ga0126383_132167121	3300010398	Tropical Forest Soil	TYDFWLKVFPKVPNPGPEDATVFLEFMQVKESRDWKDFVDTSLMDEIEREGFLSSVYK*
Ga0134127_113289521	3300010399	Terrestrial Soil	MRAFVAGLARFRTDREFGARLLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK*
Ga0137332_10382452	3300012122	Soil	ETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELEREGFVASIYK*
Ga0137334_10926941	3300012179	Soil	ILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWKDFVDTSVMDELEREGFLTAVYK*
Ga0137363_111376861	3300012202	Vadose Zone Soil	RFRTDREFGARVLGKNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQHDWREFVDTSVMDELAREGFLNSVYK*
Ga0137374_100162528	3300012204	Vadose Zone Soil	FGTKVLGKNLRETDGKILQETYDFWLKVFPKVPNPGPEDATVFVEFMQVKEPRDWREFVDTSVMDDLEREGFLTSVYK*
Ga0137362_102939202	3300012205	Vadose Zone Soil	VKNFMKGFVAGLARFRTDREFGAKVLGKNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQHDWREFVDSSVMDELAREGFLSSVYK*
Ga0137378_101203033	3300012210	Vadose Zone Soil	LGQNLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMQVKEQRDWRDFVDPSLMEELERDGFLSSVYK*
Ga0137387_106279501	3300012349	Vadose Zone Soil	PKILQETYDFWLKVFPRVSNPGPEDATVFLEFMQIKEQHDWREFVDTSVMDELAREGFLSSVYK*
Ga0137366_111430562	3300012354	Vadose Zone Soil	RFRADREFGTRVLGKNLREPDAKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELDREGFLNSVYK*
Ga0157319_10211401	3300012497	Arabidopsis Rhizosphere	ETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQRDWREFVDTSVMDELAREGFLSSVYK*
Ga0137373_103759281	3300012532	Vadose Zone Soil	ETDPKILQDTYDFWLKVFPKVPYPGPEDATVFLEFMQVKESRDWKDFVDTSLMEELEREGFLASVYK*
Ga0157286_104805931	3300012908	Soil	TDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0126375_106706691	3300012948	Tropical Forest Soil	DPKIMQETYDFWLKVFPKVPYPGAEDATVFLEFMQVKEPRDWKDFVDTSLMDEIEREGFLSSVYR*
Ga0164303_109983122	3300012957	Soil	ARFRTDREFGVKVLGQNLRETDPKILQETYDFWLKVFPKIPNPGPEDATVFLEFMQVKEQRDWKDFVDPSLMEELERDGFLSSVYK*
Ga0126369_107647911	3300012971	Tropical Forest Soil	YDFWLKVFPKVPYPGPEDATVFLDFMQVKEPRDWKDFVDTSLMDEIEREGFLSSVYK*
Ga0157373_104621291	3300013100	Corn Rhizosphere	DREFGSRVLGKHLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0157375_125321921	3300013308	Miscanthus Rhizosphere	FIAGLARFRTYREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0163163_132168951	3300014325	Switchgrass Rhizosphere	TLKSFMRAFCRGLARFRTDPEVGARLLSKNLRESGPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK*
Ga0180065_11076732	3300014878	Soil	MKAFVAGLAKFRTDREFGSGVLAKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKERRDWKDFVDTSVMDELEREGFLTAVYK*
Ga0157376_102467543	3300014969	Miscanthus Rhizosphere	FIAGLARFRTDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0173478_104280751	3300015201	Soil	KILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG*
Ga0137412_109227072	3300015242	Vadose Zone Soil	KILQETYDFWLKVFPRIPNPGPEDATIFLEFMQIKEKRDWREFVDTSVMNELAREGFLNSVYK*
Ga0163161_118638281	3300017792	Switchgrass Rhizosphere	DAGDVFDDIGLARFRTDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFVQVKEQRDWRDFVDTSVMDELQREGFLNSVYKELG
Ga0187786_101874642	3300017944	Tropical Peatland	QETYDFWLKVFPKVPTPGPEDATVFLELMQVKGPRDWKEFVDPSLMEELDRDGFFSTVYK
Ga0187788_101839122	3300018032	Tropical Peatland	DPQILQETYDFWLKVFPKVPTPGPEDATVFLELMQVKGPRDWKEFVDPSLMEELDRDGFFSTVYK
Ga0184636_13291641	3300018068	Groundwater Sediment	ETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWKDFVDTSVMDELEREGFLTAVYK
Ga0184635_100466341	3300018072	Groundwater Sediment	GLARFRTDREFGARVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEKHDWREFVDTSVMDELAREGFLSSVYK
Ga0184640_103144231	3300018074	Groundwater Sediment	DGKILSETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQRDWTEFVDPTIMHELELEGFVASIYK
Ga0184629_102437061	3300018084	Groundwater Sediment	GLARFRTDRSFGIKVLGKNLRETDAKVLDETYDFWLKVFPRVPFAGPEDATVFLDMMEVKEQRDWKEFVDSSIMEDLEREGFLATVYK
Ga0184629_104731272	3300018084	Groundwater Sediment	GLARFRTDRSFGIKVLGKNLRETDAKVLDETYDFWLKVFPKFPFPGPEDATVFLDMMEIKEQHDWKEFVDSSIMEDLEREGFLATVYK
Ga0184629_107159452	3300018084	Groundwater Sediment	GFVAGLARFRTDREFGSRVLAKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWKDFVDTSVMDELEREGFLTAVYK
Ga0066655_108833182	3300018431	Grasslands Soil	LARFRADREFGTRVLGKNLREPDAKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELDREGFLNSVYK
Ga0190271_124071321	3300018481	Soil	GKILSETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELEREGFVASVYK
Ga0187894_104738972	3300019360	Microbial Mat On Rocks	GQNLRETDPKILQETYDFWLKVFPKVPNPGPEDGTVFLEFMQVKESRDWKDFVDTSLMEELDREGFLNSVYR
Ga0193707_10543093	3300019881	Soil	ETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK
Ga0210404_109186951	3300021088	Soil	PKILQETYDFWLKVFPKVPNPGPEDATVFLEFMQVKEHRDWKDFVDTSLMDELEREGFVAVVYR
Ga0222622_109568421	3300022756	Groundwater Sediment	GKNLRETDPKILQETYDFWLKVFPRVPHPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK
Ga0209320_101356082	3300025155	Soil	REFGVRVLGKGLRETDPKILQETYDFWLKVFPKVPNPGPEDATVFLELMQVKEKRDWKDFVDPSLMEELEREGFLASVYK
Ga0207697_101821932	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	DPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG
Ga0210113_10702091	3300025796	Natural And Restored Wetlands	FGVRVLAKNLREGDPKILQETYEFWLKVFPRVPNPGPEDATVFLELMQIKEQRDWRDFVDTSFMDELEREGFLSAVYK
Ga0207682_104372451	3300025893	Miscanthus Rhizosphere	MRAFVAGLARFRTDREFGSRVLGKNLRENDSKILQDTYDFWLIVFPRVPTPGPEDATVFLEFMQVKEQRDWREFVDTSVMDDLEKEGFVAS
Ga0207671_110438411	3300025914	Corn Rhizosphere	LGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG
Ga0207663_109028691	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	ARFRTDREFGARLLSKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0207657_108799722	3300025919	Corn Rhizosphere	VLGKNLRENDPKILQETYDFWLKVFPRVPTPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0207681_106138802	3300025923	Switchgrass Rhizosphere	LQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG
Ga0207659_111769672	3300025926	Miscanthus Rhizosphere	LARFRTDREFGTRVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK
Ga0207686_101723974	3300025934	Miscanthus Rhizosphere	REFGARVLGKNLRETDSKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQHDWREFVDTSVMDELAREGFLSSIYK
Ga0207670_102285023	3300025936	Switchgrass Rhizosphere	PKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDALQREGFLNSVYK
Ga0209058_10622241	3300026536	Soil	RVLGKNLRETDPKILQETYDFWLKVFPKVPYPGPEDATVFLEFMQVKESRDWKDFVDTSLMEELKREGFLASVYK
Ga0209814_100219052	3300027873	Populus Rhizosphere	MKGFVAGLARFRTDREFGSRVLGNNLRETDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELEREGFLNSVYK
Ga0209481_102898892	3300027880	Populus Rhizosphere	DPRILQETYEFWLKVFPKIPNPGPEDATVFLEFMQVKEQRDWKEFVDPSLMEELERDGFLSSVYK
Ga0209481_107629971	3300027880	Populus Rhizosphere	ARFRTDREFGAKVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQIKEQRDWREFVDTSVMDELTREGFLNSVYK
Ga0207428_102100961	3300027907	Populus Rhizosphere	RFRTDREFGSRVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYKERG
Ga0209382_103861673	3300027909	Populus Rhizosphere	LPAWRAFAPTGSSAATCWAKTSRKTDPKILQETYDFWLKVFPRVPNPGPEDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0209382_114097002	3300027909	Populus Rhizosphere	LGKNLRETDGKILSETYDFWLKVFPRVPTPGPEDATVFLEFMQVKEQRDWRDFVDTSVMDELEREGFVASVYK
Ga0307500_102457111	3300031198	Soil	ENDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEQRDWREFVDTSVMDELAREGFLSSVYK
Ga0310813_123866261	3300031716	Soil	KILQETYDFWLKVFPRVPNPGPEDATVFLEFMQIKEPHDWREFVDTSVMDELEREGFLSSVYK
Ga0306925_106939781	3300031890	Soil	RVLGKNLKENDPKILQETYDFWLKVFPRVPNPGPQDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0310912_102494961	3300031941	Soil	LGKNLKENDPKILQETYDFWLKVFPRVPNPGPQDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0310913_112204481	3300031945	Soil	QETYDFWLKVFPRVPNPGPEDATVFLGFMQVKEQRDWRDFVDTSVMDELQREGFLNNVYK
Ga0310906_103679701	3300032013	Soil	DREFGARLLGKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0318533_106267731	3300032059	Soil	FIAGLARFRTDREFGSRVLGKNLKENDPKILQETYDFWLRVFPRVPNPGPQDATVFLDFMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0307470_106141471	3300032174	Hardwood Forest Soil	LGQNLRETDPKILQETYDFWLKVFPKFPNPGPEDATVFLEFMQVKEQRDWKEFVDLSLMEELERDGFLSSVYK
Ga0310896_103235072	3300032211	Soil	KSHRETVKSFMRAFVAGLARFRTDREFGARLLGKNLRESDPKILQETYDFWLKVFPRVPNPGPEDATVFLELMQVKEQRDWRDFVDTSVMDELQREGFLNSVYK
Ga0310812_101102761	3300032421	Soil	RTDREFGTRVLGKNLRENDPKILQETYDFWLKVFPRVPNPGPEDATVFLEFMQVKEHRDWRDFVDTSVMDELQQEGFLNSVYK
Ga0335080_112525382	3300032828	Soil	TDRDFGTRVLGKNLRENDPKILQETYDFWLKVFPKVPNPGPEDATVFLEFMGVKEHHDWKEFVDTSLMDELEREGFVTAVYK
Ga0364935_0014251_1883_2068	3300034151	Sediment	VGGSGYVALKVFPRVPNPGPEDATVFLELMQVKEQRDWKDFVDTSVMDELEREGFLTAVY
Ga0364941_077788_576_776	3300034417	Sediment	TDPKILQETYDFWLKVFPKIPNPGPEDATVFLEFMQVKEQRDWRDFVDPSLMEELEREGFLSSVYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072385

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences