Metagenome Family F072346

Basic Information
Family ID	F072346
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	65 residues
Representative Sequence	LKDNHLNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMENGSSYPAYRQTKKIKDYLELHNL
Number of Associated Samples	75
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	58.68 %
% of genes near scaffold ends (potentially truncated)	18.18 %
% of genes from short scaffolds (< 2000 bps)	50.41 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (80.992 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (38.017 % of family members)
Environment Ontology (ENVO)	Unclassified (70.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (75.207 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1B570J40625_1004723433 2JGI25909J50240_11054421 3JGI25920J50251_100684602 4Ga0069718_157379492 5Ga0070744_100034783 6Ga0075464_100648514 7Ga0102917_13467602 8Ga0102856_10847902 9Ga0114340_100216813 10Ga0114340_100218720 11Ga0114340_100460113 12Ga0114343_100077232 13Ga0114363_10258531 14Ga0114876_10144737 15Ga0114880_100062216 16Ga0114880_10061882 17Ga0114880_10190871 18Ga0114880_11252324 19Ga0114880_11730052 20Ga0102829_10037448 21Ga0114973_1000868011 22Ga0114973_100649328 23Ga0114973_106990951 24Ga0114962_100009789 25Ga0114962_1000105010 26Ga0114980_103382074 27Ga0114968_102519472 28Ga0114978_100336154 29Ga0114981_100887631 30Ga0114981_100958423 31Ga0114981_101787325 32Ga0114979_100211298 33Ga0114979_101141922 34Ga0114969_1000917314 35Ga0114969_100258203 36Ga0114969_103525061 37Ga0114974_100073137 38Ga0114974_101137811 39Ga0114976_102974762 40Ga0114971_100062683 41Ga0114971_1000629911 42Ga0114967_100360383 43Ga0114967_102516092 44Ga0114967_105728541 45Ga0133913_108111881 46Ga0133913_110477871 47Ga0133913_111431145 48Ga0133913_129326321 49Ga0133913_132831262 50Ga0133913_133836744 51Ga0157210_10067981 52Ga0157210_10175081 53Ga0164293_1000587920 54Ga0181364_10334252 55Ga0181350_10153857 56Ga0181365_10206283 57Ga0181365_10674542 58Ga0181356_10632662 59Ga0181358_12420771 60Ga0181357_10539754 61Ga0181357_12994801 62Ga0181346_10339332 63Ga0181346_11118913 64Ga0181346_13278932 65Ga0181348_11704811 66Ga0181355_10783542 67Ga0181359_10348834 68Ga0181359_10379652 69Ga0181359_11249342 70Ga0181359_12178642 71Ga0181359_12364532 72Ga0211731_100157557 73Ga0208597_10139471 74Ga0208718_10390034 75Ga0222714_102208571 76Ga0222713_101728081 77Ga0222712_1000191924 78Ga0222712_1000336620 79Ga0222712_101589241 80Ga0181351_10814162 81Ga0244775_1000231713 82Ga0244776_103794003 83Ga0208923_10045064 84Ga0209443_10420682 85Ga0209443_12931261 86Ga0209597_100059931 87Ga0209597_100787912 88Ga0209189_100094823 89Ga0209084_100071326 90Ga0209596_100100419 91Ga0209596_10570493 92Ga0209296_100444115 93Ga0209088_1000387516 94Ga0209088_100178808 95Ga0209088_100179987 96Ga0209829_1000299013 97Ga0209500_100184049 98Ga0209246_100688753 99Ga0209246_103754021 100Ga0209353_101807734 101Ga0209354_102004902 102Ga0209299_10158388 103Ga0209299_10235891 104Ga0247723_10017708 105Ga0304730_100241515 106Ga0304730_100541111 107Ga0315899_104617233 108Ga0315908_112633532 109Ga0315908_114130531 110Ga0315274_112776274 111Ga0315289_109722651 112Ga0315905_1000212418 113Ga0315905_101729466 114Ga0315905_102941512 115Ga0334996_0458474_338_511 116Ga0334979_0041511_2514_2726 117Ga0335024_0009512_3133_3306 118Ga0334990_0005551_5894_6097 119Ga0335055_0038513_264_437 120Ga0335055_0250700_3_170 121Ga0335007_0493162_436_645
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78 1B570J40625_1004723433 2JGI25909J50240_11054421 3Ga0069718_157379492 4Ga0070744_100034783 5Ga0102917_13467602 6Ga0114343_100077232 7Ga0114876_10144737 8Ga0114973_1000868011 9Ga0114969_103525061 10Ga0222713_101728081 11Ga0222712_1000191924
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 1Ga0114978_100336154 2B570J40625_1004723433 3JGI25920J50251_100684602 4Ga0070744_100034783 5Ga0114340_100216813 6Ga0114340_100218720 7Ga0114340_100460113 8Ga0114880_100062216 9Ga0114880_10061882 10Ga0114973_1000868011 11Ga0114962_100009789 12Ga0114962_1000105010 13Ga0114971_1000629911 14Ga0114967_102516092 15Ga0164293_1000587920 16Ga0181365_10206283 17Ga0181357_12994801 18Ga0181346_13278932 19Ga0181359_10379652 20Ga0181359_12178642 21Ga0208597_10139471 22Ga0222712_1000191924 23Ga0181351_10814162 24Ga0209597_100787912 25Ga0247723_10017708 26Ga0315274_112776274 27Ga0315905_101729466 28Ga0335055_0250700_3_170 29Ga0335007_0493162_436_645
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.90% β-sheet: 6.12% Coil/Unstructured: 48.98%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.7.1: Mob1/phocein	d1pi1a1	1pi1	0.65034
a.8.3.3: AmyC C-terminal domain-like	d2b5dx1	2b5d	0.64208
e.26.1.3: Acetyl-CoA synthase	d3i01m_	3i01	0.63807
a.224.1.1: Glycolipid transfer protein, GLTP	d4gh0a_	4gh0	0.61959
f.13.1.0: automated matches	d7l1vr_	7l1v	0.61769

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF11753	DUF3310	48.76
PF08774	VRR_NUC	20.66
PF00959	Phage_lysozyme	3.31
PF12850	Metallophos_2	2.48
PF02195	ParBc	2.48
PF04404	ERF	1.65
PF14297	DUF4373	1.65
PF04466	Terminase_3	1.65
PF08241	Methyltransf_11	0.83
PF00145	DNA_methylase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	1.65
COG0207	Thymidylate synthase	Nucleotide transport and metabolism [F]	0.83
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.83

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.08 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.79 %
Unclassified	root	N/A	9.92 %
Viruses	superkingdom	All Organisms → Viruses	84.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	80.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	80.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	80.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	80.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	80.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Unclassified	root	N/A	9.92 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	80.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_100472343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1189	Open in IMG/M
3300003393\|JGI25909J50240_1105442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558	Open in IMG/M
3300003404\|JGI25920J50251_10068460	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300004481\|Ga0069718_15737949	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300006484\|Ga0070744_10003478	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4734	Open in IMG/M
3300006805\|Ga0075464_10064851	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300007590\|Ga0102917_1346760	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511	Open in IMG/M
3300007636\|Ga0102856_1084790	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300008107\|Ga0114340_1002168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11683	Open in IMG/M
3300008107\|Ga0114340_1002187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11634	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.17%
Terrestrial	Environmental → Terrestrial	0.83%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.83%
Freshwater	Environmental → Aquatic → Freshwater	88.43%
Marine	Environmental → Aquatic → Marine	10.74%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	0.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.13%
Lake	Environmental → Aquatic → Freshwater → Lake	56.20%
Lentic	Environmental → Aquatic → Freshwater → Lentic	24.79%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.48%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	54.55%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	22.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.96%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.83%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.13%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.65%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	4.13%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.61%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	38.02%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.31%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	4.96%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.83%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M

Showing 1 to 10 of 75 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1004723433	3300002835	Freshwater	LSENYKNAIKWIDKMLENPTKQIKINCATYLDLNFSLQINKNRILMNDGSSYSAYRQTKKIKDYLQLQD*
JGI25909J50240_11054421	3300003393	Freshwater Lake	MRIQRPTIQIVIDCATYHDLNYSLEVNLNRIKMNNGSXRAAYIQTKKIKDYLEFKGI*
JGI25920J50251_100684602	3300003404	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIQIDCTIYHDLNFSLEVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ*
Ga0069718_157379492	3300004481	Sediment	LSENYKKAIQWITTRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQT
Ga0070744_100034783	3300006484	Estuarine	MSDNYKMAIHWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLELRGL*
Ga0075464_100648514	3300006805	Aqueous	LKDNHLNAIKWITMRIQRPTIQVVIECATYHDLNYSLEINLNRIKMESGASYSAYRQTKKIKDYLELKNL*
Ga0102917_13467602	3300007590	Estuarine	LKDNHLNAIKWIDKMLENSTKQIQIGCETYHDLNYSLEINRNRILMQNGSSYSAYK
Ga0102856_10847902	3300007636	Estuarine	MSDNYKMAIHWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLEKHNL*
Ga0114340_100216813	3300008107	Freshwater, Plankton	LSENYKKAIEWITMRLQQPTIQVVIEGATYLDLNYSLEVNKNRMLMNNGSSYSAYRQTKKIKDYFLFQKI*
Ga0114340_100218720	3300008107	Freshwater, Plankton	LSENYKNAIKWINTMLENPTKQIKIDCATYHDLNFSLEVNKNRILMNDGSSKSAYIQTKKIKDYFLFQ*
Ga0114340_100460113	3300008107	Freshwater, Plankton	LSENYKKAIQWITIRIQQPTIKLIIEGATYHDLNYSLEINLNRIKNKNGSSYSAYRQTKKIKDYLELYKL*
Ga0114343_100077232	3300008110	Freshwater, Plankton	MLENPTKQIKIDCATYHDLNFSLEVNKNRILMNDGSSKSAYIQTKKIKDYFLFQ*
Ga0114363_10258531	3300008266	Freshwater, Plankton	AIDWITMRIQRPTIQIVIDCATYLDLNYSLEINLNRIKMQNGSSYPAYRQTKKIKDYLELHKL*
Ga0114876_10144737	3300008448	Freshwater Lake	MRIQRPTIQVVIDCATYQDLNYSLEINMNRIKMESGASYPAYRQTKKIKDYLELHNL*
Ga0114880_100062216	3300008450	Freshwater Lake	LKENYRNAIKWIDKMLQYPTRQIQIDCATYLDLNFSLQVNKNRILMNDGSSYPAYRQTKKIKDYLEFCNF*
Ga0114880_10061882	3300008450	Freshwater Lake	LSENYKKAIEWITMRIQRPTIQVVIERATYLDLNYSLEINLNRIKNQNGSSLPAYRQTKKIKDYLELHNL*
Ga0114880_10190871	3300008450	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHKL*
Ga0114880_11252324	3300008450	Freshwater Lake	LSENYKKAIEWITMRLQRPTIQVVIDCATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLEKHGL*
Ga0114880_11730052	3300008450	Freshwater Lake	LKDNHLNAIKWITMRLQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELKNL*
Ga0102829_10037448	3300009026	Estuarine	MSDNYKMAIHWITMRLQRPTIQIVIEGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLELRGL*
Ga0114973_1000868011	3300009068	Freshwater Lake	LKDNHLSAVKWITMRIQRPTIQLVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHKI*
Ga0114973_100649328	3300009068	Freshwater Lake	LKDNYLNAIKWITMRIQRPTIQVVIEGATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELRGI*
Ga0114973_106990951	3300009068	Freshwater Lake	LKDNHLNAIKWIDKMLENQTKQIQIDCATYLDLNYSLEINKNRILMQNGSSYSAYRQTKKIKDY
Ga0114962_100009789	3300009151	Freshwater Lake	LKENHRNAIKWIDKMLENPTGQMQIDCATYLDLNFSLQVNKNRILMNDGSSYPAYRQTKKIKDYLELQK*
Ga0114962_1000105010	3300009151	Freshwater Lake	LKENHRNAIKWIDKMLEYPTRQIKINCATYLDLNFSLEINKNRILMENGSSYPAYRQTKKIKDYLEMHEF*
Ga0114980_103382074	3300009152	Freshwater Lake	LNDNHLSAVKWITMRIQRPTIQVVIDCATYLDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLEKHGL*
Ga0114968_102519472	3300009155	Freshwater Lake	MKDNHLNAIKWITMRIQRPTIQVVIDCATYQDLNYSLKINLNRIKMESGASYPAYRQTKKIKDYLELHNL*
Ga0114978_100336154	3300009159	Freshwater Lake	LKDNHLNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMENGSSYPAYRQTKKIKDYLELHNL*
Ga0114981_100887631	3300009160	Freshwater Lake	MKDNHLSAVKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHNL*
Ga0114981_100958423	3300009160	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMESGASYPAYRQTKKIKDYLELRGI*
Ga0114981_101787325	3300009160	Freshwater Lake	DNHLSAVKWITMRIQRPTIQLVIDCATYHDLNYSLEINLNRIKMESGASYPAYQQTKKIKDYLELHNL*
Ga0114979_100211298	3300009180	Freshwater Lake	MRLQRPTIQVVIECATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHGL*
Ga0114979_101141922	3300009180	Freshwater Lake	MKDNHLSAVKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLDMHNL*
Ga0114969_1000917314	3300009181	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHGL*
Ga0114969_100258203	3300009181	Freshwater Lake	LKENHRNAIKWIDKMLEYPTRQIQIDCATYLDLNFSLEINKNRILMQNGSSYPAYRQTKKIKDYLELQ*
Ga0114969_103525061	3300009181	Freshwater Lake	YPTRQIKIDCATYLDLNFSLEINKNRILMENGSSYPAYRQTKKIKDYLELQ*
Ga0114974_100073137	3300009183	Freshwater Lake	MKDNHLSAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHNL*
Ga0114974_101137811	3300009183	Freshwater Lake	QVVIDCATYYDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHNL*
Ga0114976_102974762	3300009184	Freshwater Lake	MKENHSNAIKWIDKMLEYPTRQIKIDCATYLDLNFSLEINKNRILMENGSSYCAYRQTKKIKDYLEMQ*
Ga0114971_100062683	3300009185	Freshwater Lake	LKDNHLNAIKWIDKMLENQTKQIQIDCATYLDLNYSLEINKNRILMQNGSSYSAYRQTKKIKDYLELQ*
Ga0114971_1000629911	3300009185	Freshwater Lake	MLKYPTKQIQIDCATYSDLNFSLEVNKNRILMNNGSSRSAYFQTKKIKNYFLFQ*
Ga0114967_100360383	3300010160	Freshwater Lake	LKENHRNAIKWIDKMLEYPTRQIKIDCATYLDLNFSLEINKNRILMENGSSYPAYRQTKKIKDYLELQ*
Ga0114967_102516092	3300010160	Freshwater Lake	LKENHSNAIKWIDKMLEYPTRQIQIDCATYFDLNFSLEINKNRILMQNGSSYPAYRQTKKIKDYLELQ*
Ga0114967_105728541	3300010160	Freshwater Lake	MLENPTRQIKIGCETYHDLNYSLEINKNRILMKNGSSYSAYRQTKKIKDYLELQD*
Ga0133913_108111881	3300010885	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEK
Ga0133913_110477871	3300010885	Freshwater Lake	MRLQRPTIQVVIECATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEK
Ga0133913_111431145	3300010885	Freshwater Lake	MRIQRPTIQVVIDCATYLDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLELHNL*
Ga0133913_129326321	3300010885	Freshwater Lake	QRPTIQLVIDCATYHDLNYSLEINLNRIKMESGASYPAYQQTKKIKDYLELHNL*
Ga0133913_132831262	3300010885	Freshwater Lake	LKDNYSNAIKWIDKMLKNPTKQIQIDCTTYHDLNFSLEVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ*
Ga0133913_133836744	3300010885	Freshwater Lake	IKWIDKMLEYPTRQIQIDCATYLDLNFSLEINKNRILMKNGSSYCAYRQTKKIKDYLELQ
Ga0157210_10067981	3300012665	Freshwater	MRLQRPTIQVVIECATYHDLNYSLEINLNRIKIESGASYPAYRQTKKIKDYLEKHGL*
Ga0157210_10175081	3300012665	Freshwater	LSENYKKAIEWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRIKNQNGSSYPAYRQTKKIKDYLELKNL*
Ga0164293_1000587920	3300013004	Freshwater	MNENYKKAIDWITMRIQRPTIQVVIEGATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLEKHGL*
Ga0181364_10334252	3300017701	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIQIDCTTYHDLNFSLKVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ
Ga0181350_10153857	3300017716	Freshwater Lake	LKDNHLNAIKWIDKMLEYPTKQIQIDCTTYHDLNFSLEVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ
Ga0181365_10206283	3300017736	Freshwater Lake	MKDNNLSAIKWITMRIQRPTIQVVIDCATYHDLNYSLEVNLNRIKIDNGSSYPAYRQTKKIKDNLEKHKL
Ga0181365_10674542	3300017736	Freshwater Lake	MKDNHLNAIKWITMRLQRPTIQVVIEGATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHKL
Ga0181356_10632662	3300017761	Freshwater Lake	LKDNHLHAIKWIDKMLENPTKQIQIDCTTYHDLNFSLKVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ
Ga0181358_12420771	3300017774	Freshwater Lake	AIKWITMRIQRPTIQVVIECATYHDLNYSLEVNLNRIKMESGASYPAYRQTKKIKDYLEKHGL
Ga0181357_10539754	3300017777	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIQIDCTIYHDLNFSLEVNKNRILMQNGSSYSAYKQTKKIKDYLELQQ
Ga0181357_12994801	3300017777	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIKIGCETYNDLNYSLEINRNRILMQNGSSYSAYRQTKKIKDYLELQK
Ga0181346_10339332	3300017780	Freshwater Lake	LKDNHLNAIKWIDKMLEYPTKQIQIDCTTYHDLNFSLEVNKNRILMQNGSSYSAYKQTKKIKDYLELQQ
Ga0181346_11118913	3300017780	Freshwater Lake	MILENYKKAIKWITMRIQRPTIQVVIDCATYHDLNYSLEVNLNRIKIDNGSSYPAYRQTKKIKDNLEKHKL
Ga0181346_13278932	3300017780	Freshwater Lake	MKDNHLNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEFKGI
Ga0181348_11704811	3300017784	Freshwater Lake	PTIQVVIDCATYLDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLELHNL
Ga0181355_10783542	3300017785	Freshwater Lake	LKDNHLNAIKWIDKMLEYPTKQIQIDCTTYHDLNFSLEVNKNRILMQNGSSYSAYKKTKKIKDYLELQQ
Ga0181359_10348834	3300019784	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLELHNL
Ga0181359_10379652	3300019784	Freshwater Lake	MKDNHLNAIKWITMRIQRPTIQIVIDCATYHDLNYSLEVNLNRIKMNNGSSRAAYIQTKKIKDYLELKGI
Ga0181359_11249342	3300019784	Freshwater Lake	MKDNHLSAVKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLGKHGL
Ga0181359_12178642	3300019784	Freshwater Lake	MQTKRPDMISENYKNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMESGASYPAYRQTKKIKDYLELHKL
Ga0181359_12364532	3300019784	Freshwater Lake	KMLENPTKQIQIDCTIYHDLNFSLEVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ
Ga0211731_100157557	3300020205	Freshwater	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMQSGASYPAYRQTKKLKDYLELHNL
Ga0208597_10139471	3300020562	Freshwater	LKNNHLNAIKWITMRLQRPTIQVVIGGATYLDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHGL
Ga0208718_10390034	3300020565	Freshwater	DLKDNHLNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHNL
Ga0222714_102208571	3300021961	Estuarine Water	AIEWITMRIQRPTIQVVIEGATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLELHGL
Ga0222713_101728081	3300021962	Estuarine Water	VVIEGATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLELHGL
Ga0222712_1000191924	3300021963	Estuarine Water	LNENYEKAIQWITTRVQRSTIQLVIDCATYQDLNYSLKINLNRIKINNGSSRPAYLQTKKIKDYLEKHNL
Ga0222712_1000336620	3300021963	Estuarine Water	MSDNYKMAIHWITMRLQRPTIQVVIDGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLELRGI
Ga0222712_101589241	3300021963	Estuarine Water	MSDNYKMAIHWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRIKNQNGSSLPAYRQTKKIKDYLELHNL
Ga0181351_10814162	3300022407	Freshwater Lake	MKDNHLNAIKWITMRLQRPTIQVVIDCATYLDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLEKHGL
Ga0244775_1000231713	3300024346	Estuarine	MSDNYKMAIHWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLELRGL
Ga0244776_103794003	3300024348	Estuarine	LKDNHLNAIKWIDKMLENSTKQIQIGCETYHDLNYSLEINRNRILMQNGSSYSAYKQTKKIKDYLELQQ
Ga0208923_10045064	3300027320	Estuarine	MSDNYKMAIHWITMRLQRSTIQIVIEGATYLDLNYSLEINLNRMKNQNGSSYPAYRQTKKIKDYLELRGL
Ga0209443_10420682	3300027707	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIQIDCTIYHDLNFSLEVNKNRILMQNGSSYSAYRQTKKIKDYLELQQ
Ga0209443_12931261	3300027707	Freshwater Lake	MKDNHLNAIKWITMRIQRPTIQVVIDCTTYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYF
Ga0209597_100059931	3300027746	Freshwater Lake	LKDNHLSAVKWITMRIQRPTIQLVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHKI
Ga0209597_100787912	3300027746	Freshwater Lake	MLENQTKQIQIDCATYLDLNYSLEINKNRILMQNGSSYSAYRQTKKIKDYLELQ
Ga0209189_100094823	3300027747	Freshwater Lake	LKENHRNAIKWIDKMLEYPTRQIKINCATYLDLNFSLEINKNRILMENGSSYPAYRQTKKIKDYLEMHEF
Ga0209084_100071326	3300027749	Freshwater Lake	MLENPTGQMQIDCATYLDLNFSLQVNKNRILMNDGSSYPAYRQTKKIKDYLELQK
Ga0209596_100100419	3300027754	Freshwater Lake	MKDNHLNAIKWITMRIQRPTIQVVIDCATYQDLNYSLKINLNRIKMESGASYPAYRQTKKIKDYLELHNL
Ga0209596_10570493	3300027754	Freshwater Lake	LKENHRNAIKWIDKMLEYPTRQIQIDCATYLDLNFSLEINKNRILMQNGSSYPAYRQTKKIKDYLELQ
Ga0209296_100444115	3300027759	Freshwater Lake	MKDNHLSAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLELHNL
Ga0209088_1000387516	3300027763	Freshwater Lake	MKDNHLSAVKWITMRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLDMHNL
Ga0209088_100178808	3300027763	Freshwater Lake	LKDNHLSAVKWITMRIQRPTIQLVIDCATYHDLNYSLEINLNRIKMESGASYPAYQQTKKIKDYLELHNL
Ga0209088_100179987	3300027763	Freshwater Lake	MRLQRPTIQVVIECATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHGL
Ga0209829_1000299013	3300027777	Freshwater Lake	LKENHSNAIKWIDKMLEYPTRQIQIDCATYLDLNFSLEINKNRILMKNGSSYCAYRQTKKIKDYLELQ
Ga0209500_100184049	3300027782	Freshwater Lake	LKDNHLNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMENGSSYPAYRQTKKIKDYLELHNL
Ga0209246_100688753	3300027785	Freshwater Lake	MKDNNLSAIKWITMRIQRPTIQIVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHKL
Ga0209246_103754021	3300027785	Freshwater Lake	LKDNHLNAIKWIDKMLENPTKQIQIDCTTYHDLNFSLEVNKNRILMQNGSSYSAYKQTKKIKDYLELQQ
Ga0209353_101807734	3300027798	Freshwater Lake	MISENYKNAIKWITMRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMESGASYPAYRQTKKIKDYLELHKL
Ga0209354_102004902	3300027808	Freshwater Lake	MRIQRPTIQIVIDCATYHDLNYSLEVNLNRIKMNNGSLRAAYIQTKKIKDYLEFKGI
Ga0209299_10158388	3300027974	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINMNRIKMESGASYPAYRQTKKIKDYLELRGI
Ga0209299_10235891	3300027974	Freshwater Lake	ITMRIQRPTIQVVIDCATYHDLNYSLKINLNRIKMESGASYPAYRQTKKIKDYLELHNL
Ga0247723_10017708	3300028025	Deep Subsurface Sediment	MLDNPTKVIKIDCATYHDLNYSLEINKNRILMQNGSSYPAYRQTKKIKDYLQNQ
Ga0304730_100241515	3300028394	Freshwater Lake	MRIQRPTIQVVIDCATYHDLNYSLEINLNRIKMESGASYPAYRQTKKIKDYLEKHGL
Ga0304730_100541111	3300028394	Freshwater Lake	MLEYPTRQIKIDCATYLDLNFSLEINKNRILMENGSSYPAYRQTKKIKDYLELQ
Ga0315899_104617233	3300031784	Freshwater	MLENPTKQIKIDCATYHDLNFSLEVNKNRILMNDGSSKSAYIQTKKIKDYFLFQ
Ga0315908_112633532	3300031786	Freshwater	LSENYKKAIEWITMRIQRPTIQVVIERATYLDLNYSLEINLNRIKNQNGSSLPAYRQTKKIKDYLELHNL
Ga0315908_114130531	3300031786	Freshwater	PTIQIVIDCATYLDLNYSLEINLNRIKMQNGSSYPAYRQTKKIKDYLELHKL
Ga0315274_112776274	3300031999	Sediment	MKDNYLNAIKWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRIKIESGASYPAYRQTKKIKDYLELHGI
Ga0315289_109722651	3300032046	Sediment	LSENYKKAIEWITMRLQRPTIQVVIEGATYLDLNYSLEINLNRIKIESGASYPAYRQTKKIKDYLELHG
Ga0315905_1000212418	3300032092	Freshwater	LKENYRNAIKWIDKMLQYPTRQIQIDCATYLDLNFSLQVNKNRILMNDGSSYPAYRQTKKIKDYLEFCNF
Ga0315905_101729466	3300032092	Freshwater	LSENYKKAIDWITMRIQRPTIQIVIDCATYLDLNYSLEINLNRIKMQNGSSYPAYRQTKKIKDYLELHKL
Ga0315905_102941512	3300032092	Freshwater	LSENYKKAIDWITMRIQQPTIQIVIDCATYLDLNYSLEINLNRIKMQSGASYPAYRQTKKIKDFIQLHKL
Ga0334996_0458474_338_511	3300033994	Freshwater	MRIQRPTIQLVIEGATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLELHGL
Ga0334979_0041511_2514_2726	3300033996	Freshwater	MNENYKKAIDWITMRIQRPTIQVVIEGATYLDLNFSLEINLNRIKNNNGSSRPAYHQTKKIKDYLEKHGL
Ga0335024_0009512_3133_3306	3300034051	Freshwater	MRLQRPTIQVVIDCATYLDLNYSLEINLNRIKIENGSSYPAYRQTKKIKDYLELHGL
Ga0334990_0005551_5894_6097	3300034068	Freshwater	MKDNHLNAIKWIDKMLEKPTKQIKIGCETYHDLNFSLEVNKNRILMNNGSSYSAYKQTKKIKDYLEL
Ga0335055_0038513_264_437	3300034110	Freshwater	MRIQRPTIQVVIEGATYLDLNYSLEINFNRIKNQNGSSLPAYRQTKKIKDYLELHKL
Ga0335055_0250700_3_170	3300034110	Freshwater	MSDNYKNAIKWIDKMLENPTKQIQIDCSTYHDLNYSLEINKNRIIMNNGSSYPAYR
Ga0335007_0493162_436_645	3300034283	Freshwater	LKENHLNAIKWIDKMLEYPTKQIKIGCETYHDLNFSLEVNKNRIQMNNGSSYSAYRQTKKIKDYLELQH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences