Metagenome / Metatranscriptome Family F072324

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072324
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	86 residues
Representative Sequence	MLEITQFDGGFSAKNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIVNAYTKQIIFSYLDNEAAKFNP
Number of Associated Samples	79
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.56 %
% of genes near scaffold ends (potentially truncated)	19.83 %
% of genes from short scaffolds (< 2000 bps)	75.21 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.893 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (49.587 % of family members)
Environment Ontology (ENVO)	Unclassified (76.033 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (90.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.75% β-sheet: 10.53% Coil/Unstructured: 37.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF14090	HTH_39	0.83
PF00004	AAA	0.83
PF04984	Phage_sheath_1	0.83
PF00155	Aminotran_1_2	0.83
PF07486	Hydrolase_2	0.83
PF06056	Terminase_5	0.83
PF02839	CBM_5_12	0.83
PF00383	dCMP_cyt_deam_1	0.83
PF02543	Carbam_trans_N	0.83
PF05345	He_PIG	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	0.83
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.83
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
All Organisms	root	All Organisms	47.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Viruses	superkingdom	All Organisms → Viruses	44.63 %
cellular organisms	root	All Organisms → cellular organisms	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	11.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	11.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	11.57 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11.57 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.65 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	9.92 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.65 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1.65 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.92 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.65 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.83 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.92 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	1.65 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.83 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.40 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9.92 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	1.65 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.83 %
Betaproteobacteria bacterium TMED156	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10037654	All Organisms → Viruses → Predicted Viral	1674	Open in IMG/M
3300001851\|RCM31_10295216	Not Available	608	Open in IMG/M
3300003277\|JGI25908J49247_10003674	All Organisms → Viruses → Predicted Viral	4897	Open in IMG/M
3300003277\|JGI25908J49247_10018338	All Organisms → Viruses → Predicted Viral	2105	Open in IMG/M
3300003277\|JGI25908J49247_10027889	All Organisms → Viruses → Predicted Viral	1620	Open in IMG/M
3300003277\|JGI25908J49247_10126037	Not Available	605	Open in IMG/M
3300003394\|JGI25907J50239_1102297	Not Available	558	Open in IMG/M
3300003404\|JGI25920J50251_10042961	All Organisms → Viruses → Predicted Viral	1244	Open in IMG/M
3300004054\|Ga0063232_10063888	Not Available	990	Open in IMG/M
3300004124\|Ga0066178_10061018	Not Available	975	Open in IMG/M
3300004124\|Ga0066178_10114709	Not Available	741	Open in IMG/M
3300004772\|Ga0007791_10096569	Not Available	897	Open in IMG/M
3300004774\|Ga0007794_10024856	All Organisms → Viruses → Predicted Viral	1788	Open in IMG/M
3300004774\|Ga0007794_10055759	Not Available	1178	Open in IMG/M
3300004774\|Ga0007794_10076492	Not Available	998	Open in IMG/M
3300004805\|Ga0007792_10205799	Not Available	605	Open in IMG/M
3300005517\|Ga0070374_10068006	Not Available	1856	Open in IMG/M
3300005584\|Ga0049082_10198272	Not Available	688	Open in IMG/M
3300006484\|Ga0070744_10141184	Not Available	692	Open in IMG/M
3300007559\|Ga0102828_1104752	Not Available	690	Open in IMG/M
3300008107\|Ga0114340_1045130	All Organisms → Viruses → Predicted Viral	1954	Open in IMG/M
3300008261\|Ga0114336_1051720	All Organisms → Viruses → Predicted Viral	2124	Open in IMG/M
3300009068\|Ga0114973_10015019	Not Available	4899	Open in IMG/M
3300009068\|Ga0114973_10145710	All Organisms → Viruses → Predicted Viral	1318	Open in IMG/M
3300009068\|Ga0114973_10253881	Not Available	947	Open in IMG/M
3300009086\|Ga0102812_10798324	Not Available	523	Open in IMG/M
3300009151\|Ga0114962_10010194	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6969	Open in IMG/M
3300009151\|Ga0114962_10109864	All Organisms → Viruses → Predicted Viral	1705	Open in IMG/M
3300009151\|Ga0114962_10263221	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	978	Open in IMG/M
3300009151\|Ga0114962_10370447	Not Available	781	Open in IMG/M
3300009151\|Ga0114962_10381217	Not Available	767	Open in IMG/M
3300009151\|Ga0114962_10398862	Not Available	745	Open in IMG/M
3300009152\|Ga0114980_10060327	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2290	Open in IMG/M
3300009154\|Ga0114963_10257245	Not Available	987	Open in IMG/M
3300009154\|Ga0114963_10703421	Not Available	523	Open in IMG/M
3300009155\|Ga0114968_10027878	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3812	Open in IMG/M
3300009155\|Ga0114968_10396314	Not Available	754	Open in IMG/M
3300009155\|Ga0114968_10499341	Not Available	653	Open in IMG/M
3300009159\|Ga0114978_10010513	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	7141	Open in IMG/M
3300009159\|Ga0114978_10115207	Not Available	1760	Open in IMG/M
3300009159\|Ga0114978_10208343	Not Available	1232	Open in IMG/M
3300009161\|Ga0114966_10728376	Not Available	540	Open in IMG/M
3300009164\|Ga0114975_10229034	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300009164\|Ga0114975_10277264	Not Available	933	Open in IMG/M
3300009164\|Ga0114975_10411751	Not Available	736	Open in IMG/M
3300009182\|Ga0114959_10118349	All Organisms → Viruses → Predicted Viral	1436	Open in IMG/M
3300009182\|Ga0114959_10303098	Not Available	797	Open in IMG/M
3300009182\|Ga0114959_10475010	Not Available	605	Open in IMG/M
3300009182\|Ga0114959_10480908	Not Available	601	Open in IMG/M
3300009419\|Ga0114982_1210781	Not Available	602	Open in IMG/M
3300009684\|Ga0114958_10170001	All Organisms → Viruses	1097	Open in IMG/M
3300010157\|Ga0114964_10541849	Not Available	547	Open in IMG/M
3300010158\|Ga0114960_10190435	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
3300010158\|Ga0114960_10374167	Not Available	700	Open in IMG/M
3300010158\|Ga0114960_10600199	Not Available	521	Open in IMG/M
3300010334\|Ga0136644_10048872	All Organisms → Viruses → Predicted Viral	2734	Open in IMG/M
3300010334\|Ga0136644_10148978	All Organisms → Viruses → Predicted Viral	1424	Open in IMG/M
3300010354\|Ga0129333_10019267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6491	Open in IMG/M
3300010885\|Ga0133913_12224871	All Organisms → Viruses → Predicted Viral	1350	Open in IMG/M
3300010885\|Ga0133913_12629557	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300010885\|Ga0133913_12923982	All Organisms → Viruses → Predicted Viral	1144	Open in IMG/M
3300010885\|Ga0133913_13268866	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300011011\|Ga0139556_1017639	All Organisms → Viruses → Predicted Viral	1028	Open in IMG/M
3300011268\|Ga0151620_1038540	All Organisms → Viruses → Predicted Viral	1605	Open in IMG/M
3300012663\|Ga0157203_1013592	Not Available	1279	Open in IMG/M
3300012663\|Ga0157203_1047975	Not Available	580	Open in IMG/M
3300012665\|Ga0157210_1069147	Not Available	533	Open in IMG/M
3300012779\|Ga0138284_1353090	Not Available	994	Open in IMG/M
3300012780\|Ga0138271_1294977	Not Available	821	Open in IMG/M
3300013006\|Ga0164294_10859214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	611	Open in IMG/M
3300013285\|Ga0136642_1000991	Not Available	13061	Open in IMG/M
3300013286\|Ga0136641_1012322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2796	Open in IMG/M
3300017723\|Ga0181362_1019606	Not Available	1452	Open in IMG/M
3300019784\|Ga0181359_1133119	Not Available	874	Open in IMG/M
3300020141\|Ga0211732_1235075	All Organisms → Viruses → Predicted Viral	1494	Open in IMG/M
3300021519\|Ga0194048_10036415	All Organisms → Viruses → Predicted Viral	2040	Open in IMG/M
3300021519\|Ga0194048_10109445	All Organisms → Viruses → Predicted Viral	1059	Open in IMG/M
3300021952\|Ga0213921_1019015	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
3300021956\|Ga0213922_1012832	All Organisms → Viruses → Predicted Viral	2276	Open in IMG/M
3300021962\|Ga0222713_10372209	Not Available	887	Open in IMG/M
3300021963\|Ga0222712_10286128	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300022747\|Ga0228703_1015910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2556	Open in IMG/M
3300023174\|Ga0214921_10407479	Not Available	691	Open in IMG/M
3300023184\|Ga0214919_10047156	All Organisms → Viruses → Predicted Viral	4173	Open in IMG/M
3300023184\|Ga0214919_10065599	All Organisms → Viruses → Predicted Viral	3322	Open in IMG/M
3300023184\|Ga0214919_10109125	All Organisms → Viruses → Predicted Viral	2327	Open in IMG/M
3300024346\|Ga0244775_11320811	Not Available	557	Open in IMG/M
3300025091\|Ga0209616_1035127	Not Available	514	Open in IMG/M
3300025578\|Ga0208864_1066053	Not Available	908	Open in IMG/M
3300025595\|Ga0208248_1037746	Not Available	1116	Open in IMG/M
3300025595\|Ga0208248_1057020	Not Available	884	Open in IMG/M
3300025616\|Ga0208613_1053556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	928	Open in IMG/M
3300027586\|Ga0208966_1064566	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300027649\|Ga0208960_1021908	All Organisms → Viruses → Predicted Viral	2459	Open in IMG/M
3300027688\|Ga0209553_1066263	Not Available	1373	Open in IMG/M
3300027707\|Ga0209443_1305418	Not Available	528	Open in IMG/M
3300027708\|Ga0209188_1000003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	345369	Open in IMG/M
3300027708\|Ga0209188_1000956	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	25095	Open in IMG/M
3300027708\|Ga0209188_1250767	Not Available	611	Open in IMG/M
3300027710\|Ga0209599_10158967	Not Available	603	Open in IMG/M
3300027712\|Ga0209499_1134486	All Organisms → Viruses	913	Open in IMG/M
3300027720\|Ga0209617_10218524	Not Available	730	Open in IMG/M
3300027733\|Ga0209297_1317055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300027736\|Ga0209190_1001470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16415	Open in IMG/M
3300027741\|Ga0209085_1214146	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	775	Open in IMG/M
3300027747\|Ga0209189_1055314	Not Available	1902	Open in IMG/M
3300027747\|Ga0209189_1066788	All Organisms → Viruses → Predicted Viral	1687	Open in IMG/M
3300027747\|Ga0209189_1067776	Not Available	1672	Open in IMG/M
3300027749\|Ga0209084_1000036	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	128953	Open in IMG/M
3300027749\|Ga0209084_1002614	Not Available	13806	Open in IMG/M
3300027749\|Ga0209084_1028612	All Organisms → Viruses → Predicted Viral	2889	Open in IMG/M
3300027754\|Ga0209596_1034961	All Organisms → Viruses → Predicted Viral	2782	Open in IMG/M
3300027754\|Ga0209596_1150039	Not Available	1038	Open in IMG/M
3300027759\|Ga0209296_1000553	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	32594	Open in IMG/M
3300027759\|Ga0209296_1033578	All Organisms → Viruses → Predicted Viral	2805	Open in IMG/M
3300027763\|Ga0209088_10051703	Not Available	1994	Open in IMG/M
3300027782\|Ga0209500_10300756	Not Available	679	Open in IMG/M
3300027797\|Ga0209107_10050590	All Organisms → Viruses → Predicted Viral	2342	Open in IMG/M
3300028392\|Ga0304729_1120147	Not Available	874	Open in IMG/M
3300028394\|Ga0304730_1024108	All Organisms → Viruses → Predicted Viral	3243	Open in IMG/M
3300032116\|Ga0315903_10589314	Not Available	857	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.35%
Terrestrial	Environmental → Terrestrial	1.65%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.56%
Marine	Environmental → Aquatic → Marine	5.79%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	60.33%
Lentic	Environmental → Aquatic → Freshwater → Lentic	23.97%
Lotic	Environmental → Aquatic → Freshwater → Lotic	4.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.31%
Creek	Environmental → Aquatic → Freshwater → Creek	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.65%
Coastal	Environmental → Aquatic → Marine → Coastal	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	60.33%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	21.49%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.48%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.65%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.65%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.83%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	49.59%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	11.57%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	7.44%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.13%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.31%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.48%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.48%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.65%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.65%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.65%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.65%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.65%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.83%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.83%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012779	Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012780	Freshwater microbial communities from Lake Croche, Canada - C_130625_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022747	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MG	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025091	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA - Floc-Cal metaG (SPAdes)	Environmental	Open in IMG/M
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental	Open in IMG/M
3300025595	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M (SPAdes)	Environmental	Open in IMG/M
3300025616	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027720	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100376542	3300000756	Freshwater And Sediment	MLQVTQTANGFHAVNNDVKNCEAIVFAESVRTGRTMLQVIHYVLEEDDSDTNLLCACETLQEEIVNTYKKQFIAEYLDEQLYNNNK*
RCM31_102952161	3300001851	Marine Plankton	MFEQIKTGDNSSFIQNTDVKNCEAIVFAEATRTGKTMLQVIHYVLEEDDSDLELLCACETLREEMRKQYANTWIADYLDNLQYELQRK*
JGI25908J49247_1000367414	3300003277	Freshwater Lake	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTKQIIFSYLDNEAAKFNP*
JGI25908J49247_100183383	3300003277	Freshwater Lake	MLEITKIGPNAHFAQNKDVKNCEAIVFAEAVRTNKTMLQVINYVLEEDDSDTNLLCACETLQEEMLNAYKTQILSSYLDEQLYAVQNA*
JGI25908J49247_100278892	3300003277	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
JGI25908J49247_101260371	3300003277	Freshwater Lake	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTNTILESYLDAELYKVQHNK*
JGI25907J50239_11022971	3300003394	Freshwater Lake	GFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
JGI25920J50251_100429611	3300003404	Freshwater Lake	EIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0063232_100638883	3300004054	Freshwater Lake	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTKQIIFSYLDNEAAKFNP
Ga0066178_100610181	3300004124	Freshwater Lake	MLEVTKVGDNSFFAVNTDVKNCEAIVFAEAVRSGRTMLQVINYVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFN
Ga0066178_101147091	3300004124	Freshwater Lake	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTNTIL
Ga0007791_100965691	3300004772	Freshwater	MLEITQFDGGFSAKNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIVNAYTKQIIFSYLDNEAAKFNP*
Ga0007794_100248561	3300004774	Freshwater	MLEVTQFANNSFFAQNSDVRNCEAIVFAEAVRSGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNALYTINNN*
Ga0007794_100557593	3300004774	Freshwater	MLEVTQTGNNSFFAQNTDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYKHNNN*
Ga0007794_100764921	3300004774	Freshwater	MLKVTQIANNGFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQII
Ga0007792_102057991	3300004805	Freshwater	MLKVTQIANNGFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIAEYLDEQLYNNNK*
Ga0070374_100680061	3300005517	Freshwater Lake	MLEVTKVGDNSFFAVNTDVKNCEAIVFAEAVRSGRTMLQVINYVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFNP*
Ga0049082_101982722	3300005584	Freshwater Lentic	MLEIKKFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEMLNAYKTQILSHYLDEQLYAVQNA*
Ga0070744_101411842	3300006484	Estuarine	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVMHYVLEEDDSDTNLLCACETLQEEIVNTYKKQFIAEYLDEQLYNNNK*
Ga0102828_11047521	3300007559	Estuarine	NAFHAVNNDVKNCEAIVFAESVRTGRTMLQVMHYVLEEDDSDTNLLCACETLQEEIVNTYKKQFIAEYLDEQLYNNNK*
Ga0114340_10451303	3300008107	Freshwater, Plankton	MLEVTKIGDNAFFAQNNDVKNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIYKAYKQKIIAEYLDNLLYENNK*
Ga0114336_10517205	3300008261	Freshwater, Plankton	MLEVTQIAQNSFFAQNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDRDTNLLCACETLDEEIRKAYTQKIIAGYLDNLLYENNK*
Ga0114973_100150199	3300009068	Freshwater Lake	MLEITKFDGGFTAENNDVKNCEAIVFAEAVRSGRTMLQVINYVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFA*
Ga0114973_101457103	3300009068	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEMLKAYKKQILEAYLDEQLYSVQQSK*
Ga0114973_102538812	3300009068	Freshwater Lake	MLQVTKTSDNSYHAVNNDVNNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQIISEYLDLALYNINNA*
Ga0102812_107983242	3300009086	Estuarine	MLEITKIGPNAHFAQNKDVKNCEAIVFAEAVRTNKTMLQVINYVLEEDDSDTNLLCACETLQEEMLNAYKTQILSNYLDEQLYAVQNA*
Ga0114962_1001019416	3300009151	Freshwater Lake	MLEITKFDGGFTAQNNDVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK*
Ga0114962_101098642	3300009151	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIVNAYTKQIIHSYLDNEIYKFVTA*
Ga0114962_102632211	3300009151	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCETIVFAEAVRTNKTMLQVLQYVLEEDDSDTNLLCACETLQEEIFNTYKKQIVFNYLDEELAKHSNY*
Ga0114962_103704472	3300009151	Freshwater Lake	MLQVTKTSDNSFYAVNNDVNNCEAIIFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQIISEYLDNALYAINNS*
Ga0114962_103812171	3300009151	Freshwater Lake	MLKVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVIHYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN*
Ga0114962_103988621	3300009151	Freshwater Lake	MLEVTQFANNSFHAQNSDVRNCEAIVFAESVRSGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNLLYENNK*
Ga0114980_100603275	3300009152	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEQIVNAYTNTILESYLDAELYKVQHNK*
Ga0114963_102572451	3300009154	Freshwater Lake	MLQVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNAL
Ga0114963_107034211	3300009154	Freshwater Lake	FDGGFTAQNNNVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK*
Ga0114968_100278789	3300009155	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0114968_103963142	3300009155	Freshwater Lake	MLEIKQFDGGFTAQNNDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSNTNLLCACETLQEEIAKAYAKKHVFEYLDSELAKHSDY*
Ga0114968_104993411	3300009155	Freshwater Lake	MLQVTKTSDNSYHAVNNDVNNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQIISEYLDLALYNINNA*
Ga0114978_100105133	3300009159	Freshwater Lake	MLEITKIGENATYACNNDVKNCEAIVFAESVRTGRTMLQVIRYVLDEDDSDTNLLCACETLEEQIELAYKSKHIVQYLDEEMYKYSK*
Ga0114978_101152074	3300009159	Freshwater Lake	MLEVTQTGNNSFFAQNTDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYKHNNN*
Ga0114978_102083432	3300009159	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIFEYLDNESYKYNTP*
Ga0114966_107283761	3300009161	Freshwater Lake	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0114975_102290342	3300009164	Freshwater Lake	MLQVKQFDGGFTAQNNDVKNCEAIVFAESVRSGRTMLQVIQYVLNEDDTDTNLLCACETLQQEIVNVYTSTILESYLDAELYKVQHNK*
Ga0114975_102772641	3300009164	Freshwater Lake	MLQVTQTANGFHAVNNNVNNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYKHNNN*
Ga0114975_104117512	3300009164	Freshwater Lake	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGKTMLQVLHYVLEEDDSDTNLLCACETLQEEIANTYKNKFIAEYLDEQLYAVQNA*
Ga0114959_101183495	3300009182	Freshwater Lake	MLEITKFDGGFTAQNNDVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILGSYLDNELYKVQ
Ga0114959_103030981	3300009182	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIF
Ga0114959_104750101	3300009182	Freshwater Lake	EITKFDGGFTAQNNDVKNCEAVVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIAKAYAKKHVFEYLDSELAKHSNY*
Ga0114959_104809082	3300009182	Freshwater Lake	MLQVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN*
Ga0114982_12107812	3300009419	Deep Subsurface	MLQVTQIAQNAFHAENNDVKNCEAIVFAEAVRTNKTMLEVINYVLEEDDSDTNLLCACETLQEEIERAYKKRFIATYLDEQVYKVKYNK*
Ga0114958_101700012	3300009684	Freshwater Lake	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVIHYVLEEDDSDTNLLCACETLQETIVNTYKKQIIAEYLDEQLYKNNN*
Ga0114964_105418491	3300010157	Freshwater Lake	MLQVTQYANGFSAQNNDVKNCEAIVFAEAVRTGKTMLQVLQYVLEEDDSDTNLLCACETLQETITNAYKKQIISDYLDEQLYKVQNA*
Ga0114960_101904352	3300010158	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIFEYLDNESYKYNTP*
Ga0114960_103741672	3300010158	Freshwater Lake	MLQVTQTANGFHAVNNNVNNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN*
Ga0114960_106001992	3300010158	Freshwater Lake	MLQVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNALYTINNN*
Ga0136644_100488725	3300010334	Freshwater Lake	MLEITKFDGGFTAQNNNVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK*
Ga0136644_101489781	3300010334	Freshwater Lake	HMLEIKQFDGGFSAQNNDVRNCETIVFAEAVRTNKTMLQVLQYVLEEDDSDTNLLCACETLQEEIFNTYKKQIVFNYLDEELAKHSNY*
Ga0129333_1001926713	3300010354	Freshwater To Marine Saline Gradient	MFEQIQTGGNSYFIQNTDVKNCEAIVFAEATRTGKTMLQVIHYVLEEDDSDLELLCACETLRDEIERAYKKVFIENYLENALYDLNNSK*
Ga0133913_122248712	3300010885	Freshwater Lake	MLEVTKVGDNSFFAQNKDVKNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLDEGFRKAYTQKIIAEYLDNLLYENNK*
Ga0133913_126295573	3300010885	Freshwater Lake	TAQNNNVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK*
Ga0133913_129239822	3300010885	Freshwater Lake	MLEINKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0133913_132688663	3300010885	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIFEYLDNESYKYNTP*
Ga0139556_10176392	3300011011	Freshwater	MLEVTKVGDNSFFAVNTDVKNCEAIVFAEAVRSGRTMLQVINFVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFNP*
Ga0151620_10385402	3300011268	Freshwater	MFEAIKQADNSVFVRNTDVKQCEAIVFAESVRTGKTMLEVLHYVLYEDDSNTELLVACETVQEQIINKYKKQIIFEYLDAEAYKFDPAR*
Ga0157203_10135923	3300012663	Freshwater	MLEITKIGEHSFHAQNNDVKNCEAIVFAESVRSGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKAYKQRIIAEYLDELAYSNK*
Ga0157203_10479751	3300012663	Freshwater	MLEITQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTSLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0157210_10691471	3300012665	Freshwater	MLEITKFDGGFSAQNNDVKNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLDEEFRKAYTQKIIAEYLDNLLYENNK*
Ga0138284_13530901	3300012779	Freshwater Lake	QMLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTNTILESYLDAELYKVQHNK*
Ga0138271_12949771	3300012780	Freshwater Lake	MLQVTQYANGFSAQNNDVKNCEAIVFAEAVRTGKTMLQVLQYVLEEDDSDTNLLCACETLQETITNAYKKQIISDYL
Ga0164294_108592142	3300013006	Freshwater	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVMHYVLEEDDSDTNLLCACETLQETIVNTYKKQFIAEYLDEQLYNNNK*
Ga0136642_100099117	3300013285	Freshwater	MLKITKFDGGFGAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTSLLCACETLQEEITKANKQRIIAEYLDELAYSNK*
Ga0136641_10123223	3300013286	Freshwater	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTSLLCACETVQEEITKANKQRIIAEYLDELAYSNK*
Ga0181362_10196064	3300017723	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDEL
Ga0181359_11331192	3300019784	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK
Ga0211732_12350751	3300020141	Freshwater	MLEVTQIGERSFHAQNNDVKNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKAYKQRIIAEYLDNALYNVQHGVA
Ga0194048_100364154	3300021519	Anoxic Zone Freshwater	MLQVTQYADNSFFAQNTDVRNCEAIVFAEAVRTGKTMLQVLQYVLEEDDSNTNLLCACETLQETITNAYKKQIISDYLDEQLYKVQNA
Ga0194048_101094452	3300021519	Anoxic Zone Freshwater	MLEVTQIANNSYFAQNKDVRNCEAIVFAEAVRTNKTMLQVINYVLEEDDSDTNLLCACETLQEEIVNAYTKQIIHSYLDNEIYKFVTA
Ga0213921_10190152	3300021952	Freshwater	MLQVTQTANGFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDNALYTINNN
Ga0213922_10128327	3300021956	Freshwater	MLQVTQTANGFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVSAYTKQIIHSYLDNEICKFV
Ga0222713_103722092	3300021962	Estuarine Water	MFEAIKQADNSVFVRNTDVKQCEAIVFAESVRTGKTMLEVLHYVLYEDDSNTELLVACETVQEQIINKYKKQIIFEYLDAEAYKFDPAR
Ga0222712_102861283	3300021963	Estuarine Water	MLEITKVGDNSFFAQNNDVRNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEIVKANKQRIIAEYLDELAYNNK
Ga0228703_10159104	3300022747	Freshwater	MLEVTKLSDNAFFAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIVKAYKKQILEQYLDEQLYNVQQSK
Ga0214921_104074792	3300023174	Freshwater	MLQVTQFEGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYTKQIIFSYLDNEVVKFMP
Ga0214919_100471566	3300023184	Freshwater	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVMHYVLEEDDSDTNLLCACETLQEEIVNTYKKQFIAEYLDEQLYNNNK
Ga0214919_100655995	3300023184	Freshwater	MLQVTQTANGFHAVNNNVNNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN
Ga0214919_101091254	3300023184	Freshwater	MLEVTQFANNSFFAQNSDVRNCEAIVFAEAVRSGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNALYTINNN
Ga0244775_113208111	3300024346	Estuarine	MLEITKIGPNAHFAQNKDVKNCEAIVFAEAVRTNKTMLQVINYVLEEDDSDTNLLCACETLQEEMLNAYKTQILSNYLDEQLYAVQNA
Ga0209616_10351271	3300025091	Freshwater	MLEITKFDGGFSAQNNDVKNCEAIVFAEAVRTGRTMLQVLNYVLEEDDSDTNLLCACETLDEEMRNAYKQRIIAEYLDDLAYKNK
Ga0208864_10660532	3300025578	Freshwater	MLEITQFDGGFSAKNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEIVNAYTKQIIFSYLDNEAAKFNP
Ga0208248_10377462	3300025595	Freshwater	MLEVTQTGNNSFFAQNTDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYKHNNN
Ga0208248_10570202	3300025595	Freshwater	MLEVTQTGNNSFFAQNTDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYKHNNN
Ga0208613_10535561	3300025616	Freshwater	MLEVTQTGNNSFFAQNTDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIIADYLDELLYK
Ga0208966_10645662	3300027586	Freshwater Lentic	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTNTILESYLDAELYKVQHNK
Ga0208960_10219084	3300027649	Freshwater Lentic	MLEVTKVGDNSFFAVNTDVKNCEAIVFAEAVRSGRTMLQVINFVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFNP
Ga0209553_10662633	3300027688	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEQIVNAYTKQIIFSYLDNEAAKFNP
Ga0209443_13054181	3300027707	Freshwater Lake	MLEITKIGPNAHFAQNKDVKNCEAIVFAEAVRTNKTMLQVINYVLEEDDSDTNLLCACETLQEEMLNAYKTQILSSYLDEQLYAVQNA
Ga0209188_10000032	3300027708	Freshwater Lake	MLEVTQFANNSFHAQNSDVRNCEAIVFAESVRSGRTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNLLYENNK
Ga0209188_100095651	3300027708	Freshwater Lake	MLQVTQYANGFSAQNNDVKNCEAIVFAEAVRTGKTMLQVLQYVLEEDDSDTNLLCACETLQETITNAYKKQIISDYLDEQLYKVQNA
Ga0209188_12507672	3300027708	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKII
Ga0209599_101589672	3300027710	Deep Subsurface	MLQVTQIAQNAFHAENNDVKNCEAIVFAEAVRTNKTMLEVINYVLEEDDSDTNLLCACETLQEEIERAYKKRFIATYLDEQVYKVKYNK
Ga0209499_11344862	3300027712	Freshwater Lake	MLKVTQIANNAFHAVNNDVKNCEAIVFAESVRTGRTMLQVIHYVLEEDDSDTNLLCACETLQETIVNTYKKQIIAEYLDEQLYKNNN
Ga0209617_102185242	3300027720	Freshwater And Sediment	MLEITKFDGGFSAQNNDVRNCEAIVFAESVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELA
Ga0209297_13170552	3300027733	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVLHYVLEEDDSDTNLLCACETLQEEITKANKQRIIAEYLDELAYSNK
Ga0209190_10014706	3300027736	Freshwater Lake	MLQVTKTSDNSYHAVNNDVNNCEAIVFAESVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQIISEYLDLALYNINNA
Ga0209085_12141461	3300027741	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCETIVFAEAVRTNKTMLQVLQYVLEEDDSDTNLLCACETLQEEIFNTYKKQIVFNYLDEELAKHSNY
Ga0209189_10553143	3300027747	Freshwater Lake	MLEITKFDGGFTAQNNNVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK
Ga0209189_10667884	3300027747	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIFEYLDNESYKYNTP
Ga0209189_10677764	3300027747	Freshwater Lake	MLQVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN
Ga0209084_10000363	3300027749	Freshwater Lake	MLKVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVIHYVLEEDDSDTNLLCACETLQETIVNTYKKQIISEYLDNALYTINNN
Ga0209084_100261413	3300027749	Freshwater Lake	MLQVTQIANNAFHAVNNDVKNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNALYTINNN
Ga0209084_10286122	3300027749	Freshwater Lake	MLEITKFDGGFTAQNNDVKNCEAIVFAESVRTGRTMLQVINYVLEQDDSDTNLLCACETLQQEIVTAYTNTILESYLDNELYKVQHNK
Ga0209596_10349614	3300027754	Freshwater Lake	MLEITKFDGGFTAENNDVKNCEAIVFAEAVRSGRTMLQVINYVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYLDNEAAKFA
Ga0209596_11500393	3300027754	Freshwater Lake	MLQVTKTSDNSYHAVNNDVNNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQ
Ga0209296_100055335	3300027759	Freshwater Lake	MLEITKIGENATYACNNDVKNCEAIVFAESVRTGRTMLQVIRYVLDEDDSDTNLLCACETLEEQIELAYKSKHIVQYLDEEMYKYSK
Ga0209296_10335784	3300027759	Freshwater Lake	MLQVKQFDGGFTAQNNDVKNCEAIVFAESVRSGRTMLQVIQYVLNEDDTDTNLLCACETLQQEIVNVYTSTILESYLDAELYKVQHNK
Ga0209088_100517032	3300027763	Freshwater Lake	MLQVTKTSDNSFYAVNNDVNNCEAIIFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQETIINTYKKQIISEYLDNALYAINNS
Ga0209500_103007561	3300027782	Freshwater Lake	MLEIKQFDGGFSAQNNDVRNCEAIVFAEAVRTGRTMLQVINYVLEEDDSDTNLLCACETLQEEITKAYKNKIIFEYLDNESYKYNTP
Ga0209107_100505902	3300027797	Freshwater And Sediment	MLQVTQTANGFHAVNNDVKNCEAIVFAESVRTGRTMLQVIHYVLEEDDSDTNLLCACETLQEEIVNTYKKQFIAEYLDEQLYNNNK
Ga0304729_11201472	3300028392	Freshwater Lake	MLQVTQTANGFHAVNNNVNNCEAIVFAEAVRTGKTMLQVINYVLEEDDSDTNLLCACETLQETIVNAYKKQIISEYLDNALYTINNN
Ga0304730_102410812	3300028394	Freshwater Lake	MLEITKFDGGFTAENNDVKNCEAIVFAEAVRSGRTMLQVINYVLEQDDSDTNLLCACETLQEEIVSAYTKQIIFSYL
Ga0315903_105893142	3300032116	Freshwater	MFEQIQTGGNSYFIQNTDVKNCEAIVFAEATRTGKTMLQVIHYVLEEDDSDLELLCACETLRDEIERAYKKVFIENYLENALYDLNNSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072324

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences