Metagenome / Metatranscriptome Family F072311

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072311
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	81 residues
Representative Sequence	AHCEPPRSSRRTKFTRASRRPHRFKQIEQDGVAIHYDFGRMREPEELHFDRKGWRRGTYRLEAYWNGSVFVGDDVPPPVRP
Number of Associated Samples	99
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	10.74 %
% of genes near scaffold ends (potentially truncated)	88.43 %
% of genes from short scaffolds (< 2000 bps)	95.87 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.488 % of family members)
Environment Ontology (ENVO)	Unclassified (26.446 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.058 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.50% β-sheet: 22.94% Coil/Unstructured: 71.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08669	GCV_T_C	57.02
PF01633	Choline_kinase	8.26
PF06351	Allene_ox_cyc	4.13
PF13561	adh_short_C2	2.48
PF16350	FAO_M	2.48
PF00919	UPF0004	0.83
PF00106	adh_short	0.83
PF02776	TPP_enzyme_N	0.83
PF00723	Glyco_hydro_15	0.83
PF13520	AA_permease_2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	0.83
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.78 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.30 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.34 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	79.34 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.34 %
Unclassified	root	N/A	1.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18402HAXZC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
2170459021\|G14TP7Y02IH4T8	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101429242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300000789\|JGI1027J11758_12479087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300000891\|JGI10214J12806_11285165	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300002155\|JGI24033J26618_1071054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300002459\|JGI24751J29686_10013849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1665	Open in IMG/M
3300004114\|Ga0062593_101482648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300004157\|Ga0062590_100723602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300004479\|Ga0062595_102515826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005093\|Ga0062594_100584327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300005093\|Ga0062594_103334723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300005169\|Ga0066810_10184929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300005186\|Ga0066676_10587947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300005331\|Ga0070670_100964691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300005345\|Ga0070692_10390131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300005355\|Ga0070671_100625807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300005356\|Ga0070674_100348195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1196	Open in IMG/M
3300005365\|Ga0070688_100672242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300005444\|Ga0070694_100592886	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005467\|Ga0070706_101735519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300005471\|Ga0070698_101580150	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005471\|Ga0070698_101909789	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005518\|Ga0070699_101606741	Not Available	596	Open in IMG/M
3300005536\|Ga0070697_100782887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300005536\|Ga0070697_101098486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300005578\|Ga0068854_102284929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300005586\|Ga0066691_10343014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300005618\|Ga0068864_102545023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005713\|Ga0066905_100599460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300005713\|Ga0066905_101012878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005764\|Ga0066903_102394782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300006046\|Ga0066652_100087782	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300006577\|Ga0074050_10023624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300006577\|Ga0074050_11752081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300006580\|Ga0074049_12562927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300006846\|Ga0075430_100879837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300009081\|Ga0105098_10218145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300009090\|Ga0099827_10957398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300009801\|Ga0105056_1015997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300009807\|Ga0105061_1068204	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300009810\|Ga0105088_1102360	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009811\|Ga0105084_1023390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300009811\|Ga0105084_1023522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300009811\|Ga0105084_1058844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300009817\|Ga0105062_1008301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1592	Open in IMG/M
3300009823\|Ga0105078_1015473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300009823\|Ga0105078_1044085	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009836\|Ga0105068_1110176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300009837\|Ga0105058_1016644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1511	Open in IMG/M
3300010029\|Ga0105074_1069321	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300010029\|Ga0105074_1105867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010047\|Ga0126382_10780862	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300011000\|Ga0138513_100015187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300011422\|Ga0137425_1072587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300012198\|Ga0137364_10050621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2765	Open in IMG/M
3300012355\|Ga0137369_10979742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012958\|Ga0164299_10865553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300012960\|Ga0164301_10520565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300012987\|Ga0164307_10116491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1704	Open in IMG/M
3300014324\|Ga0075352_1138568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300014488\|Ga0182001_10699425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300015258\|Ga0180093_1041414	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1017	Open in IMG/M
3300015372\|Ga0132256_102968710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300015373\|Ga0132257_101476045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300017965\|Ga0190266_10200018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300017997\|Ga0184610_1044092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300018028\|Ga0184608_10115877	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1132	Open in IMG/M
3300018028\|Ga0184608_10132729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300018028\|Ga0184608_10426348	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300018028\|Ga0184608_10527946	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300018029\|Ga0187787_10067291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300018072\|Ga0184635_10001497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6821	Open in IMG/M
3300018084\|Ga0184629_10218207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300018466\|Ga0190268_11255468	Not Available	620	Open in IMG/M
3300018476\|Ga0190274_12539065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300019377\|Ga0190264_10134904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1239	Open in IMG/M
3300020006\|Ga0193735_1010879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2866	Open in IMG/M
3300021080\|Ga0210382_10263575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300021344\|Ga0193719_10353669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300021344\|Ga0193719_10383197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300022534\|Ga0224452_1049598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300022534\|Ga0224452_1052614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300025926\|Ga0207659_10543092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300025937\|Ga0207669_11381989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300026075\|Ga0207708_11646518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300026095\|Ga0207676_10078059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2680	Open in IMG/M
3300027056\|Ga0209879_1077050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300027163\|Ga0209878_1008282	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1485	Open in IMG/M
3300027379\|Ga0209842_1028969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300027949\|Ga0209860_1040425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300027956\|Ga0209820_1038720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300027961\|Ga0209853_1168961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300028719\|Ga0307301_10203887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300028744\|Ga0307318_10044837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1458	Open in IMG/M
3300028755\|Ga0307316_10115141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300028768\|Ga0307280_10106288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300028771\|Ga0307320_10134616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300028771\|Ga0307320_10213440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300028771\|Ga0307320_10384811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300028791\|Ga0307290_10176258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300028796\|Ga0307287_10254606	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300028803\|Ga0307281_10056459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300028803\|Ga0307281_10226703	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300028814\|Ga0307302_10129253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300028814\|Ga0307302_10198988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	977	Open in IMG/M
3300028819\|Ga0307296_10256052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300028819\|Ga0307296_10271514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300030336\|Ga0247826_10784999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300031226\|Ga0307497_10121187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300031740\|Ga0307468_100097994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1733	Open in IMG/M
3300031740\|Ga0307468_102231520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031949\|Ga0214473_12122293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300032174\|Ga0307470_11333864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300033550\|Ga0247829_11037150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300033550\|Ga0247829_11051059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300033550\|Ga0247829_11217734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300034113\|Ga0364937_024941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300034164\|Ga0364940_0159653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300034176\|Ga0364931_0239900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300034354\|Ga0364943_0270591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.43%
Host-Associated	Host-Associated	10.74%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.86%
Aquatic	Environmental → Aquatic	11.57%
Plants	Host-Associated → Plants	10.74%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.73%
Sediment	Environmental → Aquatic → Sediment	9.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Floodplain	Environmental → Terrestrial → Floodplain	3.31%
Freshwater	Environmental → Aquatic → Freshwater	2.48%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Sand	Environmental → Terrestrial → Soil → Sand	14.88%
Loam	Environmental → Terrestrial → Soil → Loam	10.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.75%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	14.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.31%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.49%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	14.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.31%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002459	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_00859600	2124908009	Soil	DRVLRLARGALPTPPGATRRTRFTKSSRRPHRFTTIRADGCTVHADWGRLDPPEEVHFDVKGWRRGTRRLEAYWNGCVFAGDDVPPL
4NP_00274080	2170459021	Switchgrass, Maize And Mischanthus Litter	SVRTCGSRRTVEPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVKP
INPhiseqgaiiFebDRAFT_1014292422	3300000364	Soil	MFTRASRRPHRFKRIEQDGFVIHYAFGSLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDVPPPVKP*
JGI1027J11758_124790871	3300000789	Soil	MFTRASRRPHRFKRIEQDGFVIHYAFGSLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVG
JGI10214J12806_112851652	3300000891	Soil	RSSFTRSSRRPHRFKEFTAEGITLHYDFGNMEPPDELHLDRKGWRRGTQRLEAYWNGSIFVGDDIPAPGTS*
JGI24033J26618_10710541	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	GSYVWLEAHCEPPRTSRRTKFTRASRRPHRFQRIEQDGLEIHYDFGRMHEPEELHLDRRGWRRGTYRLEAYWNGSVFVGDDIPPPGAS*
JGI24751J29686_100138493	3300002459	Corn, Switchgrass And Miscanthus Rhizosphere	HCEPPRSSRRTKFTRASRRPHTFKQIEQDGLVIHYAFGKLKEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS*
Ga0062593_1014826481	3300004114	Soil	GPVGSYMWLEAHCDPPGATRRTRFTRSSRRPHRFHTVPSGNLTVHADWGALDPPEELHLDVKGWRRRTRRLEAYWNGCIFAGEDVPLPSES*
Ga0062590_1007236022	3300004157	Soil	LVGSYVWLEAHCEPPRSSRRTKFTRASRRPHRFKRIEQDGFVIHYAFGNLNEPDELHFDRKGWRRGTHRLEAYWNGSVFVGDDVPPPVRP*
Ga0062595_1025158262	3300004479	Soil	AHCEPPRTSRRSSFTRSSRRPHRFKQAEGAGVSVHYDFARMPPPEELHFDVKGLRAKTRRLEAYWNGSIFVGEDVPAPGSE*
Ga0062594_1005843272	3300005093	Soil	SSRRSTFTRASRRPHRFRSLEQDGFVLHYDFGNQSEPEELHFDRKGWRKGTYRLEAYWNGSIFVGDDIPPPVRP*
Ga0062594_1033347231	3300005093	Soil	EPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPGA*
Ga0066810_101849292	3300005169	Soil	ASRRPHTFKRIEQDGFVIHYAFGNLNEPEELHFDRKGWRRGTQRLEAYWNGSVFVGDDIPPPGA*
Ga0066676_105879473	3300005186	Soil	HCEPPRSSRKSSFTRSSRRPHAFKVTEGDGIRVHHDFGRLDPPDELHFDVKGWRKGTQRLEAYWNGVIFVGEDIEPPAARDSYRPPGPRNSR*
Ga0070670_1009646911	3300005331	Switchgrass Rhizosphere	HCEPPRTSRRTKFTRASRRPHRFQRIEQDGLEIHYDFGHMHEPEELHLDRKGWRRGTYRLEAYWNGSVFVGDDIPPPGAS*
Ga0070692_103901311	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	GSYVWLEAHCEPPRSSRRTKFTRASRRPHRFKRIELDDLVLHYDFGNMDEPEELHFDRKGWRHGTQRLEAYWNGSVFVGDDIPPPGT*
Ga0070671_1006258072	3300005355	Switchgrass Rhizosphere	GLVGSYVWLEAHCEPPRSSRRSGFTRSSRRPHRFKTLGSDGLTVHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS*
Ga0070674_1003481952	3300005356	Miscanthus Rhizosphere	SYVWLEAHCEPPRSSRRTKFTRASRRPHRFKRIEQDGFVIHYAFGNLNEPDELHFDRKGWRRGTHRLEAYWNGSVFVGDDVPPPVRP*
Ga0070688_1006722423	3300005365	Switchgrass Rhizosphere	YVWLEAHCEPPRTTRRSSFTRSSRRPHRFKQAEGEGVSVHYDFARMPPPEELHFDVKGFRAKTRRLEAYWNGSVFAGMDIPVPGSE*
Ga0070694_1005928863	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RPHRFKQIEQDGLEIHYDFGRMHEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS*
Ga0070706_1017355191	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VGSFVWLEAHCEPPRSSRRTKFTRASRRPHTFKQIEQDGLVIHYAFGKLKEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS*
Ga0070698_1015801501	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SSFTRSSRRPHRFKEFTAEGITLHYDFGNMEPPDELHLDRKGWRRGTQRLEAYWNGSIFVGDDIPAPGMS*
Ga0070698_1019097892	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	STFTRASRRPHRFRSLEQDGFVLHYDFGNQSEPEELHFDRKGWRKGTYRLEAYWNGSIFVGDDIPPPVRP*
Ga0070699_1016067411	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	SSRRPHRFESMTAEGITLHYAFGRQQPPEELHLDRKGWRRGTHRLEAYWNGSIFVGDDIPAPGADR*
Ga0070697_1007828871	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SFVWLEAHCEPPRSSRRSGFTRSSRRPHRFRALQSDGLTVHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFAGDDVPPPRR*
Ga0070697_1010984861	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HRGIVGSHIWLEAHTEPPRASRKTSFTRSSRRPHRFRELEAAGISVHYDFGKMKPPEELHFDRKGWRKGSHRLEAYWNGSVFVGDDIPAPGSP*
Ga0068854_1022849292	3300005578	Corn Rhizosphere	GLIGSYVWLEAHCDPPGATRRTRFTKSSRRPHRFTTIRADGCTVHADWGRLDPPEEVHFDVKGWRRGTRRLEAYWNGCVFAGDDVPPL*
Ga0066691_103430141	3300005586	Soil	SFVWLEAHCEPPRSSRRSSFTRSSRRPHRFRALESEGLTVHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFAGDDIPAPRPTS*
Ga0068864_1025450231	3300005618	Switchgrass Rhizosphere	AHCEPPRTSRRTKFTRASRRPHRFQRIEQDGLEIHYDFGHMHEPEELHLDRKGWRRGTYRLEAYWNGSVFVGDDIPPPGAS*
Ga0066905_1005994602	3300005713	Tropical Forest Soil	VWVWLDPHRGLVGGHTWLEAHAEPPRSSLKTKFTRASRRPHRFRRLDADGLTVHYDFGRMDPPEELHLERKGWRKGSHRLEAYW
Ga0066905_1010128783	3300005713	Tropical Forest Soil	GSYIWLEAHAEPPRASRRTSFTRSSRRPHRFKEIEQDGFVLHYDFGRMDPPEELHLDLKGWRKGTRRLEAYWNGMVFAGDDVPPPDRDRTR*
Ga0066903_1023947822	3300005764	Tropical Forest Soil	AHCEAPGSTRRSSFTRSSRRPHRFRRLDADGLTVHYDWGRLESPEELHFDVKGWRKGTHRLEAYWNGSIFAGEDIPPPESPAE*
Ga0066652_1000877824	3300006046	Soil	VWLEAHCEPPGSSRRSSFTRSSRRPHRFRALESDGLTVHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPKP*
Ga0074050_100236242	3300006577	Soil	SHVWLEAHCEPPRSSRRTTFTRASRRPHRFQKIEQDGLVIHYAFGNLSEPEELHFDRKGWRRGTYRLEAYWNGSVFVGDDIPPPVTT*
Ga0074050_117520813	3300006577	Soil	HVWLEAHCEPPRSSRRTKFTRASRRPHTFKRIEQDGFVVHYAFGNLSEPEELHFDRKGWRRGTQRLEAYWNGSVFVGDDIPPPGA*
Ga0074049_125629271	3300006580	Soil	AHCEPPRSSRRTKFTRASRRPHGFVRMEQGGIVIHYDFGNMSPPEELHFDRKGWRRGTQRLEAYWNGSVFVGDDIPPPRT*
Ga0075430_1008798372	3300006846	Populus Rhizosphere	EPPRASRRTSFTRSSRRPHRFESMTAEGITLHFDFGRQDPPEELHLDRKGWRRGTYRLEAYWNGSIFVGDDIPAPGA*
Ga0105098_102181452	3300009081	Freshwater Sediment	SYVWLEAHPEPPRSSRRTKFTRASRRPHGFRRIEQDGIVVNYYFGNMAEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPVTP*
Ga0099827_109573983	3300009090	Vadose Zone Soil	TSRKSNFTRSSKRPHRFKEVDGSGVTVHYAFARLEPPDELHFDVKGWRAGSRRLEAYWNGCVFAGEDIESPAARDAFQPPGPSRKR*
Ga0105056_10159971	3300009801	Groundwater Sand	MFTRASRRPHRFKRIEQDGFVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVRP*
Ga0105061_10682042	3300009807	Groundwater Sand	PHGFRRIEQDGIVVNYDFGNMNEPEELHLDRKGWRKGNRRLEAYWNGSVFVGDDIPPPVTP*
Ga0105088_11023602	3300009810	Groundwater Sand	SSRRTKFTRAARRPHGFRRIEQDGIVVNYDFGNMSEPEELHFDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVTP*
Ga0105084_10233901	3300009811	Groundwater Sand	MFTRASRRPHRFKRIEQDGFVIHYAFGNLNEPAELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVRP*
Ga0105084_10235221	3300009811	Groundwater Sand	PPRSSRRTKFTRASRRPHGFRRIEQDGIVVNYDFGNMAEPEELHLDRKGWRKRTHRLEAYWNGSVFVGDDIPPPVTP*
Ga0105084_10588441	3300009811	Groundwater Sand	PPRSSRRTMFTRASRRPHRFKRIEQDGLVIHYAFGNLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVTT*
Ga0105062_10083011	3300009817	Groundwater Sand	MFTRASRRPHRFKRIEQDGFVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGEDIPPPVRP*
Ga0105078_10154732	3300009823	Groundwater Sand	PPRSSRRTKFTRASRRPHGFRRIEQDGIVVNYDFGNMSEPEELHFDRKGWRKGTYRLEAYWNGSVFVGDDIPPPVRP*
Ga0105078_10440852	3300009823	Groundwater Sand	FTRASRRRHRFKRIEQDGFVIHYAFGSLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGEDIPPPVRP*
Ga0105068_11101761	3300009836	Groundwater Sand	HRGVVGSYVWLEAHPEPPRSSRRTKFTRASRRPHRFRTVGHDGVVLHYDFGNMTEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDVPPPVRP*
Ga0105058_10166442	3300009837	Groundwater Sand	MFTRASRRPHRFKRIEQDGFVIHYAFGSLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVTT*
Ga0105074_10693211	3300010029	Groundwater Sand	SRRTMFTRASRRPHRFKRIEQDGFVIHYAFGNLNEPAELHFDRKGWRPGTYRLEAYWNGSVFVGEDIPPPVRP*
Ga0105074_11058671	3300010029	Groundwater Sand	EPPRSSRRTMFTRASRRPHRFKRIEQDGLVIHYAFGNLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVTT*
Ga0126382_107808621	3300010047	Tropical Forest Soil	SRKTKFTRASRRPHRFKEIEQDGLLLHYDFGRMDPPEELHLDLKGWRKGTHRLEAYWNGMVFVGDDVPPPSPPSRGSRSA*
Ga0138513_1000151871	3300011000	Soil	ETHCESPPSSRRSTFTRASRRPHSFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVRP*
Ga0137425_10725872	3300011422	Soil	RSSRRPHRFESMTAEGITLHFDFGRQTPPEELHLDRKGWRRGTHRLEAYWNGSVFVDEDIPPPVRP*
Ga0137364_100506214	3300012198	Vadose Zone Soil	VWLEAHCEPPRSSRQSSFTRSSRRSHRFKTLGSDGLTIHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFAGDDVLPPR*
Ga0137369_109797421	3300012355	Vadose Zone Soil	MFTRASRRPHRFKRIEQDGFVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPIRP*
Ga0164299_108655531	3300012958	Soil	GSFIWLEAHCDPPGSTRQTRFTRSSRRPHRFTTLAGPGCTVHPDWGRLDPPDEIHFDVKGWRRGTRRLEAYWNGCVFAGDDVPPPNAAVR*
Ga0164301_105205651	3300012960	Soil	VWLEAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPDELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS*
Ga0164307_101164914	3300012987	Soil	DPRRGLIGSFIWLEAHCDPPGSTRQTRFTRSSRRPHRFTTLAGSGCTVHADWGRLDPPDEILFDVKGWRRGTRRLEAYWNGCVFAGDDVPPPNAAVR*
Ga0075352_11385681	3300014324	Natural And Restored Wetlands	GIVGSHVWLEAHCEPPRTSRRTKFTRASRRPHRFATMQADGVELHYDFGRVDPPDELHLDRKGWRRGTYRLEAYWNGSVFVDDPPMPGPMRP*
Ga0182001_106994252	3300014488	Soil	HIWLEAHAEPPRTSRQTTFTRSSRRPHRFRELEAQGITVHYDFGRMQPPEELHFDRKGWRKGSHRLEAYWNGSVFVGDDIPAPGSP*
Ga0180093_10414142	3300015258	Soil	PHRFTQLEQDGLVLHHDFGRMEPPEELHLDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVRP*
Ga0132256_1029687101	3300015372	Arabidopsis Rhizosphere	VWLEAHCEPPRTSRRTKFTRASRRPHRFQRIEQDGLEIHYDFGRMHAPGELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS*
Ga0132257_1014760451	3300015373	Arabidopsis Rhizosphere	WLEAHCEPPRTSRRTKFTRASRRPHRFQRIEQDGLEIHYDFGRMHAPGELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS*
Ga0190266_102000182	3300017965	Soil	MFTRASRRPHRFKRIEQDGFVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDIPPPVRP
Ga0184610_10440922	3300017997	Groundwater Sediment	VGSYVWLEAHCEPPRTSRKTKFTRASRRPHRFTQLEQDGLVLHHDFGRMEPPEELHLDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVTP
Ga0184608_101158772	3300018028	Groundwater Sediment	STFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEEHHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVRP
Ga0184608_101327291	3300018028	Groundwater Sediment	IWLEAHCEPPRSSRRTKFTRASRRPHRFKQLEQDGVAIHYDFGRMREPEELHFDRKGWRRGTQRLEAYWDGCVFVV
Ga0184608_104263482	3300018028	Groundwater Sediment	TFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLESYWNGSVFVGDDIPPPVRP
Ga0184608_105279461	3300018028	Groundwater Sediment	TFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVRP
Ga0187787_100672911	3300018029	Tropical Peatland	PHRGIVGSFIWLEAHAEPPRATRRSSFTRSSRRTHRFQTLEAEGLTVHYDFGRMAPPEELHFDLKGWREGTRRLEAYWNGSVFAGEDVPPPEPRG
Ga0184635_100014972	3300018072	Groundwater Sediment	MFTRASRRPHRFKRIEQDGFVIHYAFGGLNEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDVPPRLRP
Ga0184629_102182072	3300018084	Groundwater Sediment	LDPHRGLVGSHVWLEAHPEPPRSSRRTKFTRASRRPHGFRRMEQDGIVVNYDFGNMNEPEELHLDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVTP
Ga0190268_112554681	3300018466	Soil	SRRPHRFESMTAEGVTLHYDFGRQTPPEELHLDRKGWRRGTYRLEAYWNGSVFVGDDIPAPGA
Ga0190274_125390652	3300018476	Soil	WLEAHPEPPRSSRRTKFTRASRRPHRFKDLEHDGVIIHYDFGNMAEPEELHLDRKGWRRGTYRLEAYWNGSVFVGDDIPPPVTT
Ga0190264_101349041	3300019377	Soil	HIWLEAHAEPPRASRRTSFTRSSRRPHRFETLTAEGITVHYDFGRIDPPEELHFDRKGWRRGTHRLEAYWNGSIFAGDDIPAPGA
Ga0193735_10108793	3300020006	Soil	EAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0210382_102635751	3300021080	Groundwater Sediment	AHCEPPRSSRRTKFTRASRRPHRFKQIEQDGVAIHYDFGRMREPEELHFDRKGWRRGTYRLEAYWNGSVFVGDDVPPPVRP
Ga0193719_103536692	3300021344	Soil	AHCEPPRSSRRTKFTRASRRPHRFKQLEQDGVAIHYDFGRMREPEELHFDRKGWRRGTQRLEAYWNGSVFVGDDVPPPVRP
Ga0193719_103831972	3300021344	Soil	RRGLVGSYVWLEAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0224452_10495982	3300022534	Groundwater Sediment	MFTRASRRPHRFKRIEQDGLVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDVPPPVRP
Ga0224452_10526141	3300022534	Groundwater Sediment	EAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLNPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0207659_105430922	3300025926	Miscanthus Rhizosphere	PRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVKP
Ga0207669_113819891	3300025937	Miscanthus Rhizosphere	PVGSYLWLEAHCDPPGATRRTRFTRSSRRPHRFHTVPSGDLTVHADWGALDPPEELHLDVKGWRRRTRRLEAYWNGCIFAGEDVPLISQS
Ga0207708_116465182	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LDAHCEPPRSSRRTKFTRASRRPHRFKQIEQDGLEIHYDFGRMHEPEELHLDRKGWRRGTQRLEAYWNGSVFVGDDIPPPA
Ga0207676_100780591	3300026095	Switchgrass Rhizosphere	EPPRTSRRTKFTRASRRPHTFKQIEQDGLVIHYAFGKLKEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPGAS
Ga0209879_10770501	3300027056	Groundwater Sand	DPHRGVVGSYVWLEAHPEPPRSSRRTKFTRASRRPHGFRRIEQDGIVVNYDFGNMAEPEELHLDRKGWRKRTHRLEAYWNGSVFVGDDIPPPVTP
Ga0209878_10082822	3300027163	Groundwater Sand	SRRTKFTRASRRPHGFRRIEQDGIVVNYDFGNMSEPEELHFDRKGWRKGTYRLEAYWNGSVFVGDDIPPPVRP
Ga0209842_10289692	3300027379	Groundwater Sand	MFTRASRRPHRFKRIEQDGFVIHYAFGNLNEPEELHFDRKGWHPGTYRLEAYWNGSVFVGEDIPPPVRP
Ga0209860_10404251	3300027949	Groundwater Sand	RPHGFRRIEQDGIVVNYDFGNMSEPEELHFDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVTP
Ga0209820_10387201	3300027956	Freshwater Sediment	GSYVWLEAHPEPPRSSRRTKFTRASRRPHGFRRIEQDGIVVNYDFGNMAEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPPPVTP
Ga0209853_11689611	3300027961	Groundwater Sand	YVWLEAHPEPPRSSRRTKFTRASRRPHRFRTVEHDGVVLHYDFGNMTEPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDVPPPVRP
Ga0307301_102038872	3300028719	Soil	HRGIVGSHVWLETHCEPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHFDFGKLSEPEELHVDRKGWRRGSYRLESYWNGSVFVGDDIPPPVKP
Ga0307318_100448372	3300028744	Soil	VGSHVWLETHCEPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVRP
Ga0307316_101151411	3300028755	Soil	PRRGLIGSYVWLEAHCDPPGATRQTRFTKSSRRPHRFTTIHADGCIVHADWGRLDPPEEVHFDVKGWRRGTRRLEAYWNGCVFAGDDVPPL
Ga0307280_101062881	3300028768	Soil	RRGLVGSFVWLEAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0307320_101346161	3300028771	Soil	LEAHAEPPRTSRRTSFTRSSRRPHRFESMSAEGITLHYAFGRHKPPEELHLDRKGWRRGTHRLEAYWNGSIFVGDDIPAPGAER
Ga0307320_102134402	3300028771	Soil	LVGSHIWLEAHAEPPGKSRRTRFTRSSRRPHRFVSMIAEGITLHYDFGRQTPPEELHLDRKGWRRGTHRLEAYWNGSVFVGDDIPAPGATPPGVS
Ga0307320_103848112	3300028771	Soil	VWVWLDPHRGLVGSHVWLEAHPEPPRSSRRTMFTRASRRPHRFKRIEQDGLVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFV
Ga0307290_101762581	3300028791	Soil	LKTKFTRASRRPHRFTQLEQDGLVLHHDFGRMEPPEELHLDRKGWRRGSYRLEAYWNGSVFVGHDIPPPVTP
Ga0307287_102546062	3300028796	Soil	SLKTKFTRASRRPHRFTQLEQDGLVLHHDFGRMEPPEELHLDRKGWRRGSYRLEAYWNGSVFVGHDIPPPVTP
Ga0307281_100564591	3300028803	Soil	HVWLEAHCEPPRSSRRTKFTVASRRPHTFKRIEQDGVVINYAFGNLTEPDELHFDRKGWRRGTHRLEAYWDGSVFVDNDIPPPGA
Ga0307281_102267032	3300028803	Soil	RRTKFTVASRRPHTFKRIEQDGLVVHYSFGTLHEPEELHLDRKGWRRGTYRLEAYWNGSVFVDNDMPPPIRP
Ga0307302_101292531	3300028814	Soil	DPHRGIVGSHVWLEAHAEPPRASRKTSFTRSSRRPHRFRELEDQGITVHYDFGRMNLPEELHLDRKGWRKGSHRLEAYWNGSVFVGDDIPAPGS
Ga0307302_101989882	3300028814	Soil	STFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLESYWNGSVFVGDDIPPPVRP
Ga0307296_102560521	3300028819	Soil	VWLEAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0307296_102715142	3300028819	Soil	HRGLVGSHVWLEAHPEPPRSSRRTMFTRASRRPHRFKRIEQDGLVIHYAFGSLSEPEELHFDRKGWRPGTYRLEAYWNGSVFVGDDVPPPVRP
Ga0247826_107849993	3300030336	Soil	VWLEAHCEPPRSSRRTKFTVASRRPHTFKRIEQDGVVVNYAFGNLTEPDELHFDRKGWRRGTHRLEAYWDGSVFVDNDIPPPGA
Ga0307497_101211872	3300031226	Soil	PRRGLVGSYVWLEAHCEPPRSSRRSGFTRSSRRTHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0307468_1000979942	3300031740	Hardwood Forest Soil	VGSHVWLETHCEPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSHRLEAYWNGSVFVGDDIPPPVRP
Ga0307468_1022315202	3300031740	Hardwood Forest Soil	DPRRGLVGSYVWLEAHCEPPRSSRRSGFTRSSRRPHRFKTLGSDGLTVHYDWGRLDPPEELHFDVKGWRKATRRLEAYWNGCVFVGDDIPAPAPRS
Ga0214473_121222932	3300031949	Soil	FVWLEAQCAPPRATKRTSFTRSSRRPRRFRAIDAGGFELHYDWGRLKPPDELHLDVKGWRKGTRRLEAYWNGCVFAGPDVPAPGSV
Ga0307470_113338641	3300032174	Hardwood Forest Soil	GIVGSHVWLETHCEPPRSSRRSTFTRASRRPHRFRSLEQDGLVLHYDFGNLSEPEELHVDRKGWRRGSYRLEAYWNGSVFVGDDIPPPVRP
Ga0247829_110371503	3300033550	Soil	KFTRASRRPHRFKQIEQDGVVIHYDFGNMNEPEELHFDRKGWRRGTQRLEAYWNGSVFVGDDIPPPGA
Ga0247829_110510592	3300033550	Soil	CEPPRSSRRTKFTVASRRPHTFKRIEQDGVVVNYAFGNLTEPDELHFDRKGWRRGTHRLEAYWDGSVFVDNDIPPPVRP
Ga0247829_112177341	3300033550	Soil	LDPRRGIVGSYVWLEAHCAAPRANRTTSFTRSSRQPHRFRTTDAEGFVVHHDLGRELPEELHLDLKGWRKGTRRLEAYWNGSVFAGPDIPKPGEG
Ga0364937_024941_729_986	3300034113	Sediment	VWLEAHPEPPRSSRRTKFTRASRRPHRFRRLEHDGLIIHYDFGNLLEPQELHFDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVRP
Ga0364940_0159653_26_310	3300034164	Sediment	VGSYIWLEAHCEPPRTSRRTKFTRASRRPHGFRTLEHDGIVVNYDLGRMDPPEELHFDRKGWRRGSYRLEAYWNGSVFVGNDVPPPATTSKARP
Ga0364931_0239900_1_297	3300034176	Sediment	LDPHRGLVGSYVWLEAHCEPPRTSRKTKFTRASRRPHRFKAIEAEGFEIHYDFGRVPMPDELHLDRKGWRRGSHRLEAYWNGSVFVEDTTLPGAVGER
Ga0364943_0270591_348_605	3300034354	Sediment	VWLEAHPEPPRSSRRTKFTRASRRPHRFRRLEHDELIIHYDFGNLLEPQELHFDRKGWRKGTHRLEAYWNGSVFVGDDIPPPVRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072311

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences