Metagenome / Metatranscriptome Family F072309

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072309
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	104 residues
Representative Sequence	TANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Number of Associated Samples	107
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.48 %
% of genes near scaffold ends (potentially truncated)	95.04 %
% of genes from short scaffolds (< 2000 bps)	92.56 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.521 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (35.537 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.85% β-sheet: 23.85% Coil/Unstructured: 62.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00583	Acetyltransf_1	15.70
PF13460	NAD_binding_10	9.92
PF07690	MFS_1	7.44
PF01370	Epimerase	5.79
PF00903	Glyoxalase	2.48
PF13673	Acetyltransf_10	2.48
PF07883	Cupin_2	1.65
PF08241	Methyltransf_11	1.65
PF08031	BBE	1.65
PF05147	LANC_like	1.65
PF01042	Ribonuc_L-PSP	1.65
PF07885	Ion_trans_2	0.83
PF02574	S-methyl_trans	0.83
PF13374	TPR_10	0.83
PF01699	Na_Ca_ex	0.83
PF00933	Glyco_hydro_3	0.83
PF13649	Methyltransf_25	0.83
PF01345	DUF11	0.83
PF13424	TPR_12	0.83
PF03704	BTAD	0.83
PF12681	Glyoxalase_2	0.83
PF01061	ABC2_membrane	0.83
PF07731	Cu-oxidase_2	0.83
PF06348	DUF1059	0.83
PF03176	MMPL	0.83
PF00027	cNMP_binding	0.83
PF08546	ApbA_C	0.83
PF02852	Pyr_redox_dim	0.83
PF13530	SCP2_2	0.83
PF01434	Peptidase_M41	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.65
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.65
COG4403	Lantibiotic modifying enzyme	Defense mechanisms [V]	1.65
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.83
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.83
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.83
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.83
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.83
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.83
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.83
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.83
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.83
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.99 %
Unclassified	root	N/A	2.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.36 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.48 %
Unclassified	root	N/A	2.48 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.65 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.05 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2.48 %
Unclassified	root	N/A	2.48 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.05 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2.48 %
Unclassified	root	N/A	2.48 %
Pigmentiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.05 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2.48 %
Unclassified	root	N/A	2.48 %
unclassified Pigmentiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → unclassified Pigmentiphaga	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.05 %
Actinobacteria bacterium 13_1_20CM_4_69_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	2.48 %
Unclassified	root	N/A	2.48 %
Pigmentiphaga sp. NML080357	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → unclassified Pigmentiphaga → Pigmentiphaga sp. NML080357	0.83 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402IIIUC	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
2088090015\|GPICI_8796373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1522	Open in IMG/M
2228664021\|ICCgaii200_c1057450	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300003993\|Ga0055468_10042026	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300003999\|Ga0055469_10004313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2462	Open in IMG/M
3300004024\|Ga0055436_10054727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300004114\|Ga0062593_100511853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300004479\|Ga0062595_101604378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300005093\|Ga0062594_100798915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300005162\|Ga0066814_10047935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300005169\|Ga0066810_10096267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300005206\|Ga0068995_10092156	Not Available	606	Open in IMG/M
3300005336\|Ga0070680_101576510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300005347\|Ga0070668_101839097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300005354\|Ga0070675_101845615	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005355\|Ga0070671_101320126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005366\|Ga0070659_100335032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1267	Open in IMG/M
3300005366\|Ga0070659_100689137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300005459\|Ga0068867_100047038	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300005466\|Ga0070685_10124152	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005535\|Ga0070684_100674373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	963	Open in IMG/M
3300005539\|Ga0068853_100352674	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300005543\|Ga0070672_100201643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1664	Open in IMG/M
3300005577\|Ga0068857_101155139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300005577\|Ga0068857_101834311	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005713\|Ga0066905_101237701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	669	Open in IMG/M
3300005843\|Ga0068860_100183768	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300006577\|Ga0074050_11868610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300006881\|Ga0068865_100463598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300007076\|Ga0075435_101454638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300009094\|Ga0111539_13236375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300009101\|Ga0105247_11418352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300009147\|Ga0114129_11798290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300009148\|Ga0105243_10060359	All Organisms → cellular organisms → Bacteria	3029	Open in IMG/M
3300009156\|Ga0111538_10078074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4214	Open in IMG/M
3300009156\|Ga0111538_11878974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300009156\|Ga0111538_12507202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300009800\|Ga0105069_1034367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300009805\|Ga0105079_1047329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300009818\|Ga0105072_1060907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300009870\|Ga0131092_10774667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300010043\|Ga0126380_12112517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300010375\|Ga0105239_13164217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300010400\|Ga0134122_11161207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300011432\|Ga0137428_1271629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300012891\|Ga0157305_10095326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300012897\|Ga0157285_10165947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	669	Open in IMG/M
3300012898\|Ga0157293_10274911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300012901\|Ga0157288_10206513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300012905\|Ga0157296_10222840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300012909\|Ga0157290_10356748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300012910\|Ga0157308_10017464	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300012910\|Ga0157308_10086599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300012911\|Ga0157301_10125297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300012912\|Ga0157306_10329184	Not Available	571	Open in IMG/M
3300012914\|Ga0157297_10331325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300012939\|Ga0162650_100026748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300012955\|Ga0164298_10157583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300012955\|Ga0164298_11355349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300012985\|Ga0164308_11222782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300013096\|Ga0157307_1038468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300013307\|Ga0157372_12184470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300014267\|Ga0075313_1039159	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300014326\|Ga0157380_13216503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9	522	Open in IMG/M
3300015200\|Ga0173480_10905292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300015371\|Ga0132258_10213669	All Organisms → cellular organisms → Bacteria	4687	Open in IMG/M
3300015371\|Ga0132258_12448155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1307	Open in IMG/M
3300015371\|Ga0132258_13702285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300015374\|Ga0132255_105531174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300018056\|Ga0184623_10150590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300018074\|Ga0184640_10129132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300022213\|Ga0224500_10104707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300022214\|Ga0224505_10286999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300022886\|Ga0247746_1005450	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300022893\|Ga0247787_1016367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300022901\|Ga0247788_1074341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300023062\|Ga0247791_1018359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300023077\|Ga0247802_1008074	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300023168\|Ga0247748_1037885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300023268\|Ga0247765_1132599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300025795\|Ga0210114_1004773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3260	Open in IMG/M
3300025901\|Ga0207688_10219347	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300025901\|Ga0207688_10740891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300025903\|Ga0207680_11372326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300025927\|Ga0207687_11828581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300025933\|Ga0207706_10108395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2444	Open in IMG/M
3300025937\|Ga0207669_10385085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1094	Open in IMG/M
3300025940\|Ga0207691_10439738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300025941\|Ga0207711_10566044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300025942\|Ga0207689_11344768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	600	Open in IMG/M
3300025972\|Ga0207668_11165920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300026041\|Ga0207639_11521411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300026089\|Ga0207648_10308758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1419	Open in IMG/M
3300026095\|Ga0207676_10544751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300026118\|Ga0207675_101030244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300026142\|Ga0207698_10689100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300027843\|Ga0209798_10455080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300027843\|Ga0209798_10547322	Not Available	522	Open in IMG/M
3300028587\|Ga0247828_10976638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300028589\|Ga0247818_10596464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300028754\|Ga0307297_10175327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pigmentiphaga → unclassified Pigmentiphaga → Pigmentiphaga sp. NML080357	741	Open in IMG/M
3300028809\|Ga0247824_10320024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	878	Open in IMG/M
3300028809\|Ga0247824_10907884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028881\|Ga0307277_10267831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300028889\|Ga0247827_10221474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059	Open in IMG/M
3300031226\|Ga0307497_10172637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031226\|Ga0307497_10423919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	641	Open in IMG/M
3300031716\|Ga0310813_10173090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1753	Open in IMG/M
3300031938\|Ga0308175_100365578	All Organisms → cellular organisms → Bacteria → Proteobacteria	1496	Open in IMG/M
3300032013\|Ga0310906_10621443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300032075\|Ga0310890_10537660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300032770\|Ga0335085_11436172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300033407\|Ga0214472_10371440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1348	Open in IMG/M
3300033412\|Ga0310810_10629025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1021	Open in IMG/M
3300033550\|Ga0247829_10445250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300033550\|Ga0247829_10735340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300033550\|Ga0247829_11086219	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300033551\|Ga0247830_11248705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300034115\|Ga0364945_0157191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300034149\|Ga0364929_0067799	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300034172\|Ga0334913_041873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.46%
Host-Associated	Host-Associated	34.71%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	34.71%
Aquatic	Environmental → Aquatic	9.92%
Wastewater	Engineered → Wastewater	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.88%
Marine	Environmental → Aquatic → Marine	5.79%
Sediment	Environmental → Aquatic → Sediment	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.83%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.09%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.13%
Loam	Environmental → Terrestrial → Soil → Loam	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Sand	Environmental → Terrestrial → Soil → Sand	2.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Sediment	Environmental → Aquatic → Marine → Sediment	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.44%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.83%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005206	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_07498020	2070309009	Soil	GVTANTAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVSPTAHVTVLTRNGDPAGFGATPITVSELAQLVRGEKPVELFEPLDTGVWLRVRNDTACAIDQQYLP
GPICI_02747700	2088090015	Soil	XXXPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
ICCgaii200_10574503	2228664021	Soil	SGETAIEAAAEDGAVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0055468_100420261	3300003993	Natural And Restored Wetlands	GEPVPNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPAGFGATPISVAELAELVEGERPVELFEPLDSGVWARYQVDTVCALDQQYQP*
Ga0055469_100043136	3300003999	Natural And Restored Wetlands	RFDPAWFTSGVTANTAAAEDGVVAAGEPVPNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPAGFGATPISVAELAELVEGERPVELFEPLDSGVWARYQVDTVCALDQQYQP*
Ga0055436_100547271	3300004024	Natural And Restored Wetlands	ELRFDPAMFTSGATANTAAAEDGAVAPGEPVPNDNYVVDESHRLYTYVLPADAKVTVLTRQAESLASTPITVAQLEQLLRGETPVELFEGLDTGFWMRYHVDAVCSLEQQYKP*
Ga0062593_1005118532	3300004114	Soil	RFDPAWFTSGVTANEAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADTKVTVLTREGDPANVGATPVTVDELAQLVAGQASVALFEPLDTGVWIRVIIDTVCSIDQQYVP*
Ga0062595_1016043781	3300004479	Soil	TSGVTANEAAAEDGAVEPGQPVPNDNYVVDESHRLYTYLVPPDTHVTVLTRNGDPANFGATKVTVAELADLVGGQKPVDLFEPLDSGVWIAVNGDTVCSIDQQYHP*
Ga0062594_1007989151	3300005093	Soil	APVPECQDRSYGHIASLTAEGDGYRLRFDPAWFTSGVTANEAAAEDGKVAPGEPVPNDNYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP*
Ga0066814_100479352	3300005162	Soil	GHVTSLTRSTGRWVMRFDPEWFTSGLTANVAAAEDGVVPPGEPVPNDNYRIDEGHRLLTYLVAANARVTVITRHGDPVQLGATPITVAQLAALVRGEKPIELFEPLDTGMWIRVHVDTVCAIDQQYQP*
Ga0066810_100962672	3300005169	Soil	FDPAWFTSGVTANTAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADAHVTVLTRQGDPVNFGATPITVAELAQLVDGKKPVELYEPLDTGVWIRVNVDTVCSIEQQYQP*
Ga0068995_100921562	3300005206	Natural And Restored Wetlands	MTSGVTANTAAAEDGVVRPGEPIPNDNYEIDEGDRVLTYLVPDDASVTVLTNNDTGIMSTPVSVSDLAELVAGRTPVELFEPLDTGFHLRYHVDTVCSLDQAYKP*
Ga0070680_1015765102	3300005336	Corn Rhizosphere	NVAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVPANTPVTVLTRQGDPANVGATSVTVDELSKLVAGKKPVELFEPLDTGVWIRINVDTVCSIDQQYVP*
Ga0070668_1018390972	3300005347	Switchgrass Rhizosphere	EPGEPVPNDNYRVDEGHRLLTYLVPANTPVTVLTRQGDPANFGATSVTVDELSQLVAGQKPVELFEPLDTGVWIRINVDTVCSIDQQYVP*
Ga0070675_1018456152	3300005354	Miscanthus Rhizosphere	PVPNDNYRIDEGHRLLTYIVAPDARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0070671_1013201262	3300005355	Switchgrass Rhizosphere	VASLSHASGRWLMRFDPEWFTSGVTANVAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPGAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0070659_1003350321	3300005366	Corn Rhizosphere	EPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0070659_1006891372	3300005366	Corn Rhizosphere	WLLRFDPAWFTSGLTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0068867_1000470385	3300005459	Miscanthus Rhizosphere	RWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPGQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0070685_101241521	3300005466	Switchgrass Rhizosphere	RIFGHVASLSHASGRWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0070684_1006743731	3300005535	Corn Rhizosphere	DPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPGAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0068853_1003526741	3300005539	Corn Rhizosphere	GEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0070672_1002016431	3300005543	Miscanthus Rhizosphere	AWFTSGVTANEAAAEDGAVEPGQPVPNDNYVVDESHRLYTYLVPPDTHVTVLTRNGDPANFGATKVTVTELADLVGGEKPVDLFEPLDSGVWIAVNGDTVCSIDQQYHP*
Ga0068857_1011551392	3300005577	Corn Rhizosphere	WFTSGLTASVAAAEDGVVPPGEPVPNDNYRIDEGHRLLTYLVEPNARVTVITRHGDPVQLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIDQQYQP*
Ga0068857_1018343112	3300005577	Corn Rhizosphere	AAADGVVQPGEHVPNDNYVIDEGHRLLTFVVAPGARVTVITRHGDPAQLGATPITVAQLAALVRGETPIDLFEPLDSGAWIRAHGDTVCAVDQQYRP*
Ga0066905_1012377011	3300005713	Tropical Forest Soil	AEDGAVEPGEPVPNDNYKIDEGHRLLTYLVPADAHVTVLTRQGDPANFLATKVSVDQLAQLVDGQKPVDLYEPLDTGVWIAVKIDTVCSIDQQYVP*
Ga0068860_1001837681	3300005843	Switchgrass Rhizosphere	PEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0074050_118686102	3300006577	Soil	SSLGITSGDHYQMQFDPAWFTSGVTANTAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYVVPDDTHVTVLTRQGDPANFGATSITVSELAQLVDGKKPVELYEPLDTGVWIRVNIDTVCSIDQQYQP*
Ga0068865_1004635981	3300006881	Miscanthus Rhizosphere	PGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0075435_1014546382	3300007076	Populus Rhizosphere	RTFGHLTSLTRSSGRWVMRFDPEWFTSGLTANVAAAEDGVVPPGEPVPNDNYRIDEGHRLLTYLIAPNARVTVITRHGDPVQLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIDQQYQP*
Ga0111539_132363752	3300009094	Populus Rhizosphere	LSGETANKAAAEDGAVPAGEPVPNDNYVVEEGHRLLTYLVQPTAHVTVLVRNGGTGDFGSKAIKVAELAQLVEGKKPVELSEPLESGIWLRVHIDTACSVEQQYRP*
Ga0105247_114183521	3300009101	Switchgrass Rhizosphere	GINLAVPEGTPVKAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0114129_117982902	3300009147	Populus Rhizosphere	AWFTSGVTANEAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADTTVTVLTREGDPASFGATPVTVEELAQLVEGGTPVELFEPLDTGVWIRVNVDTVCSIDQQYVP*
Ga0105243_100603591	3300009148	Miscanthus Rhizosphere	DNYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP*
Ga0111538_100780746	3300009156	Populus Rhizosphere	VTASTAAAEDGVVSPGEPVPNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPSGFGATPISVAELAELVEGKRPVELFEPLDSGVWARYQVDTVCALDQQYQP*
Ga0111538_118789742	3300009156	Populus Rhizosphere	AAEDGVVEPGEPVPNDNYRVDEGHRLLTYLVARRARVTVLTRHGDPARLGATPIGISKLAALVRGEKPSELFEGLDTGVWLRVHVDTVCRIDQQYLP*
Ga0111538_125072021	3300009156	Populus Rhizosphere	NYRIDEGHRLLTYLVSPTAHVTVLTRNGDPAGFGATPVTVSELAQLVRGEKPVELFEPLDTGVWLRIRNDTACAIDQQYLP*
Ga0105069_10343672	3300009800	Groundwater Sand	RFDPAWFTSGVTANTAAAEDGVVAPGEPVPNDNYRIEEGHRLLTYLVPTDARVTVLTRQGDPANFGSTPITVSELAQLVNGEKPVELFEPLDTGVWIRVHIDTVCALDQQYVP*
Ga0105079_10473291	3300009805	Groundwater Sand	KGDGYELRFDPAWFTTGLTANTAAAEDGVVEPGEPVPNDNYRVEEGHRLLTYVVPASAHVTVLTRQGDPAQLGATPITVAQLAKLVDGGRPVVLFEPLDTGVWIRINAGTVCSLDQQYQP
Ga0105072_10609071	3300009818	Groundwater Sand	EDGVVAPGEPVPNDNYRIEEGHRLLTYLVPTDARVTVLTRQGDPANFGSTPITVSELAQLVNGEKPVELFEPLDTGVWIRVHIDTVCALDQQYVP*
Ga0131092_107746671	3300009870	Activated Sludge	ANVAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVAPNARVTVLTRHGSPPQLGATPITVEQLAELVRGEKPIELFEPLDTGMWIRVHVDTVCAIDQQYQP*
Ga0126380_121125172	3300010043	Tropical Forest Soil	EDGAVEPGEPVPNDNYKIDEGHRLLTYLVPTDAHVTVLTRQGDPANFLATKVSVDQLAQLVDGQKPVDLYEPLDTGVWIAVKIDTVCSIDQQYTP*
Ga0105239_131642172	3300010375	Corn Rhizosphere	FTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP*
Ga0134122_111612072	3300010400	Terrestrial Soil	DAAAEDGAVEPGEPVPNDNYRVDEGHRRLTYLVPADAPVTVLTKEGDPQSFGATPITVTELAQLVGGKTPVELYEPLDTGVWIRVDIDTVCAIDQQYVP*
Ga0137428_12716291	3300011432	Soil	FGHISSLTRKDDLYELRFDPAWFTSGVTANVAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADTHVTVLTRQGDPAGLGATPITVAELAQLVDGQSPVELFEPLDTGVWIQVNVDTVCALDQQYQP*
Ga0157305_100953262	3300012891	Soil	RFDPAWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVPPSTPVTVLTREGDPAGFGATAISVAQLAELVEGEKPVELFEPLDSGVWARYHVDTVCALDQQYQP*
Ga0157285_101659472	3300012897	Soil	DGVVEPGEPVPNDNHRIDEGHRLLTYLVPANTPVTVLTRQGDPANFGATSVTVDELSQLVAGQKPVELFEPLDTGVWIRIHVDTVCSIDQQYIP*
Ga0157293_102749111	3300012898	Soil	VPNDNYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAELVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP*
Ga0157288_102065131	3300012901	Soil	NYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0157296_102228402	3300012905	Soil	LTAEGDGYRLRFDPAWFTSGVTANEAAAEDGKVAPGEPVPNDNYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP*
Ga0157290_103567481	3300012909	Soil	PNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0157308_100174643	3300012910	Soil	GDRTFGHIASLERDSGRWLLRFDPAWFTSGLTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0157308_100865991	3300012910	Soil	EPGEPVPNDNYRVDEGHRLLTYLVPANTPVTVLTRQGDPANFGATSVTVEELSQLVAGQKPVELFEPLDTGVWIRIHVDTVCSIDQQYVP*
Ga0157301_101252971	3300012911	Soil	PAWFTSGVTANVAAAEDGKVEPGEPVPNDNYVVDEGHRLLTYLVPTDTPVTVLTRQGDPATFGATSISVEELSRLVAGEKPIELFEPLDTGVWIRFHVDTVCSIDQQYRP*
Ga0157306_103291842	3300012912	Soil	EPGEPVPNDNHRIDEGHRLLTYLVPANTPVTVLTRQGDPANFGATSVTVDELSQLVAGQKPVDLFEPLDTGVWIRIHVDTVCSIDQQYIP*
Ga0157297_103313252	3300012914	Soil	ASVAAAADGAVQPGEPVPNDNYVIDEGHRLLTFVVAPGARVTVITRHGDPAQLGATPITVAQLAALVRGETPIDLFEPLDSGAWIRAHGDTVCAVDQQYRP*
Ga0162650_1000267482	3300012939	Soil	HERRDREHCRAEDGVIEPGEPVPNDNYRIEEGDRLLTYLVPTDAHVTVLTRDGDGVNFGATPITVSELAQLVHGEKPVVLFEPLDTGVWLRVQIDTVCAVDQQYQP*
Ga0164298_101575833	3300012955	Soil	VPSACPPVANDNYVVDESHRLLTYLVPADARVTVLTRHGDPANVGATEVGADELAELVGGYKPVDLFEPLDTGVWIRFVVDTVCSVEQQYVP*
Ga0164298_113553491	3300012955	Soil	VMRFDPEWLTSGLTASAAAAEDGVMPPGEPVPNDNYRIDEGHRLLTYLVAPKARVTVITRHGDPVQLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIEQQYQP*
Ga0164308_112227821	3300012985	Soil	GEPVPNDNYVVDESHRLLTYLVPADAHVTVLTRHGDPANFGATEVGVDELAELVDGHKPVDLFEPLDSGVWIRFDVDTVCSVEQQYVP*
Ga0157307_10384681	3300013096	Soil	DNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAKLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0157372_121844702	3300013307	Corn Rhizosphere	TANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP*
Ga0075313_10391593	3300014267	Natural And Restored Wetlands	PNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPAGFGATPISVAELAELVEGERPVELFEPLDSGVWARYQVDTVCALDQQYQP*
Ga0157380_132165031	3300014326	Switchgrass Rhizosphere	EGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP*
Ga0173480_109052921	3300015200	Soil	AWFTSGVTANAAAAEDGVVAAGEPVPNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPAGFGATAISVAQLAELVEGKKPVELFEPLDSGVWARYHIDTVCALDQQYQP*
Ga0132258_102136691	3300015371	Arabidopsis Rhizosphere	ERDSGRWLLRFDPAWFTSGLTANTAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYVVAPHARVTVLTRHGNAAQFGATPITVAQLAQLVRGEKPVRLFEPLDTGMWIRVHVDTVCAIDQQYQP*
Ga0132258_124481551	3300015371	Arabidopsis Rhizosphere	NVAAAADGVVSPGEPVPNDNYEIEEGHRLLTYLVAPDARVTVITRHGDPAQLGATRITVAQLAALVRGETPIDLFEPLDSGVWIRVDVDTVCAVDQQYRP*
Ga0132258_137022851	3300015371	Arabidopsis Rhizosphere	NAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLEPGVWIRVHVDTICAIEQQYQP*
Ga0132255_1055311741	3300015374	Arabidopsis Rhizosphere	SGLTANVAAAEDGVVRPGEPVPNDNYRIDEGHRLLTYLVAPNARVTVITRHGDPVRLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIDQQYEP*
Ga0184623_101505901	3300018056	Groundwater Sediment	AAEDGMVEPGEPVPNDNYVVEEGHRLLTYLVPTFAKATVLVNNKSGILSTPVTVAELAKLVRGEKLKRLKLYEPLASGIWLTVDIDKVEAIDQQYRP
Ga0184640_101291321	3300018074	Groundwater Sediment	AAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVDPDAQVTVLTRQGDPANFGSTPITVSELAQLVKGEKPVELFEPLDSGVWIRVNVDTVCALEQQYQP
Ga0224500_101047071	3300022213	Sediment	RIEEGHRLLTYLVPSEAHVTVLTNDGTGIMSTPIGVPELAQLLNGEKPVELFEPLDTGAWIRIDIDTVCALDQQYQP
Ga0224505_102869991	3300022214	Sediment	SVPIDNYRIEEGDRLLTYLVPADADVTVLTNDGTGILSTPVTVAELAQLVKGEKPIELFEGLDTGFWMRYQVDTVCSLDQQYIP
Ga0247746_10054501	3300022886	Soil	GLTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247787_10163671	3300022893	Soil	GRWLLRFDPAWFTSGVTANTAAAEDGVVGRGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247788_10743411	3300022901	Soil	NYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP
Ga0247791_10183591	3300023062	Soil	DSGRWLLRFDPAWFTSGLTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247802_10080742	3300023077	Soil	AAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247748_10378851	3300023168	Soil	NTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247765_11325992	3300023268	Plant Litter	RWLLHFDPAWFTSGLTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0210114_10047731	3300025795	Natural And Restored Wetlands	ELRFDPAWFTSGVTANTAAAEDGVVAAGEPVPNDNYRVEEGHRLLTYLVPPSTPVTVLTREGDPAGFGATPISVAELAELVEGERPVELFEPLDSGVWARYQVDTVCALDQQYQP
Ga0207688_102193471	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0207688_107408912	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	FDPAWFTSGVTANEAAAEDGAVEPGQPVPNDNYVVDESHRLYTYLVPPDTHVTVLTRNGDPANFGATKVTVTELADLVGGEKPVDLFEPLDSGVWIAVNGDTVCSIDQQYHP
Ga0207680_113723262	3300025903	Switchgrass Rhizosphere	CGDRIFGHVASLSHASGRWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207687_118285812	3300025927	Miscanthus Rhizosphere	TFGHIASLERDSGRWLLRFDPAWFTSGVTANTAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0207706_101083952	3300025933	Corn Rhizosphere	MRFDPEWFTSGLTANVAAAEDGVVPPGEPVPNDNYRIDEGHRLLTYLVEPNARVTVITRHGDPVQLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIDQQYQP
Ga0207669_103850851	3300025937	Miscanthus Rhizosphere	FGHVASLSHASGRWLMHFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPGQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207691_104397382	3300025940	Miscanthus Rhizosphere	DGDGYRLLFDPAWFTSGVTANEAAAEDGAVEPGQPVPNDNYVVDESHRLYTYLVPPDTHVTVLTRNGDPANFGATKVTVTELADLVGGEKPVDLFEPLDSGVWIAVNGDTVCSIDQQYHP
Ga0207711_105660441	3300025941	Switchgrass Rhizosphere	VVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207689_113447682	3300025942	Miscanthus Rhizosphere	TAAAEDGVVGPGEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0207668_111659202	3300025972	Switchgrass Rhizosphere	ASGRWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAQDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207639_115214111	3300026041	Corn Rhizosphere	ASGRWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207648_103087582	3300026089	Miscanthus Rhizosphere	RWLMRFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPGQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207676_105447512	3300026095	Switchgrass Rhizosphere	WLMHFDPEWFTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0207675_1010302441	3300026118	Switchgrass Rhizosphere	NEAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADTKVTVLTREGDPANFGSTPITVDELAQLVDGETPVELFEPLATGVWIRVNVDTVCSIDQQYVP
Ga0207698_106891003	3300026142	Corn Rhizosphere	VPNDNYRIDEGHRLLTYLVAPNARVTVVTRHGDPVRLGATPITVAQLAALVRGKKPIELFEPLDTGMWIRVHVDTVCAIDQQYEP
Ga0209798_104550802	3300027843	Wetland Sediment	AWFTSGETANTAAAEDGAVASGEPVPNDNYRVEEGHRLLTYLVPPDADVTVLTNDGTGIMSTPITVSELAQLVKGEKPVKLFEPLDTGFWMRYHVDTVCSLDQQYLP
Ga0209798_105473222	3300027843	Wetland Sediment	DNYRIEEGHRLLTYLVLPDAHVTVLTNDGTGIMSTAITVSDLAQLVKGEKPVELFEPLDTGFGIRINIDTVCALDQQYQP
Ga0247828_109766382	3300028587	Soil	AAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPGQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0247818_105964641	3300028589	Soil	CAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPGQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0307297_101753272	3300028754	Soil	PAWFTSGETANDAAAEDGVVEPGEPVPNDNYRIEEGHRLLTYLVPADTPVTVLTREGDPQSFGATPITVAELAQLVDGETPVELYEPLDTGVWIRVHIDTVCAIDQQYVP
Ga0247824_103200241	3300028809	Soil	YRIDEGHRPLTYLVSPTAHVTVLTRNGEPAGFGATPITVSELAQLVRGENPVELFEPLDTGVWLRVRNDSACAIDQQYLP
Ga0247824_109078842	3300028809	Soil	EEPVPNDNYRIEEGHRLLTYLVPTDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP
Ga0307277_102678312	3300028881	Soil	TANIAAAEDGAVEAGQPVPNDNYVVEEGHRLLTYLVPDDAHVTVLTKDGDPAQLGATPITVSELAQIVQGASSLELFEPLETGVWIRVNVDTVRAIDQQYQP
Ga0247827_102214741	3300028889	Soil	RFDPAWFTSGVTANEAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVPADTPVTVLTREGDPASFGATQVTVDELAQLVAGETPVELFEPLDTGVWIRVNIDTVCSIDQQYVP
Ga0307497_101726373	3300031226	Soil	PAWFTSGVTANTAAAEDGKVEPGQPVPNDNYVVDESHRLLTYLVPSTTPVTVLTREGDPAQFGATAIPVSELAEIVANGKSSSHTLFEPLDSGIWIRVHVDTVCALDQQYRP
Ga0307497_104239192	3300031226	Soil	WLMRFDPEWFTSGVTANVAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPGAHVTVLTRHGSPAQPGRTTITVSQLAALVRGKKPIALFEPLETGVWIRVHVDTVCAIEQQYQP
Ga0310813_101730902	3300031716	Soil	CGDREFGHINSLKRDGDGYRLRFDPAWFTSGVTANEAAAEDGAVEPGQPVPNDNYVVDEGHRLLTYLVPTNARVTVLTRHGDPANFGATEVGVDELAELVDGQKPVDLFEPLDTGVWIRFNVDTVCSIDQQYRP
Ga0308175_1003655781	3300031938	Soil	FTSGVTANIAAAEDGVVEPGEPVPNDNYRVDEGHRLLTYLVAPGARVTVLTRHGDPAHLGATPIGVSQLAALVRGEKPVELFEGLDTGVWLRVNVDTVCRIDQQYVP
Ga0310906_106214432	3300032013	Soil	GVTANTAAAEDGVVEPGEPVPNDNYRVDEGDRLLTYLVPTDAHVTVLTRKGDPANFGATPITVSELAQLVRGEKPVVLFEPLDTGVWIRVQIDTVCAVDQQYQP
Ga0310890_105376603	3300032075	Soil	PAWFTSGVTANTAAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVSPTANVTVLTRTGDPAGFGATPITVSELSQLVRGQKPVELFEPLDTGVWIRVHIDTACAIDQQYQP
Ga0335085_114361721	3300032770	Soil	PGEPVPNDNYEVDEGHRLFTYLVPSDTPVTVLTNNGTGQMATPVTVAQLAELVAGGKPVELFEGLDTGFWMRFHVDTACSLDQQYKP
Ga0214472_103714402	3300033407	Soil	MTRTADHFELRFDPAWFLSGETANDAAADDGAVEPGQPVPNDNYVVEEGHRLLTYSVADDAQVSVLTREGDPAQFGATAITVAQLAEILDGTSRLRLFEPLDSGVWITVDVDTVRAIDQQYRP
Ga0310810_106290252	3300033412	Soil	GEPVPNDNYRIDEGHRLLTYIVAPHARVTVLTRHGDPGRFGATPITVAQLAELVRGEKPVQLFEPLDTGVWIRIHVDTVCAIEHQYQP
Ga0247829_104452501	3300033550	Soil	FTSGVTANAAAAEDGVVAPGEPVPNDNYRVDEGHRLLTYLVAPDAHVTVLTRHGSPAQPGRTTITVSQLAALVRGEKPIALFEPLETGVWIRVHVDTICAIEQQYQP
Ga0247829_107353401	3300033550	Soil	AAAEDGVVEPGEPVPNDNYRIDEGHRLLTYLVPANTPVTVLTRQGDPANVGATSVTVDELSKLVAGKKPVELFEPLDTGVWIRINVDTVCSIDQQYVP
Ga0247829_110862191	3300033550	Soil	PGEPVPNDNYRIDEGHRLLTYLVSPTAHVTVLTRNGDPAGFGATSITVSELSQLVKGQKPVELFESLDTGVWIRVHIDTACAIDQQYQP
Ga0247830_112487051	3300033551	Soil	HIASLTAEGDGYRLRFDPAWFTSGVTANEAAAEDGKVAPGEPVPNDNYRIEEGHRLLTYLVPSDAKVTVLTNNGSGILSTPVTVSELAGLVAGEKPVELYEPLDTGVWISVHVDTACTIDQQYLP
Ga0364945_0157191_397_684	3300034115	Sediment	EDGVVAPGEPVPNDNYVIEEGHRLLTYLVPTDARVTVLTRQGDPANFGSTPITVSELAQLVNGEKPVELFEPLDTGVWIRVHIDTVCTLDQQYVP
Ga0364929_0067799_1_348	3300034149	Sediment	ELRFDPAWFLSGETANTAAAEDGAVEPGQPVPNDNYVVEEGHRLLTYLVADDAHVSVLTRSGDPAQFGATPIKVSELARIVQGTSRLDLFEPLDTGVWITIDGDTVHAIDQQYRP
Ga0334913_041873_3_362	3300034172	Sub-Biocrust Soil	GDHFELRFDPAWFLSGEAANTAAAEDGAVDPGQPVPNDNYVVEEGHRLQTYLVARDAHVTVLTRRGHPAQLGATPITVSELARIVRGKSRVRLFEPLATGVWITVRVDTVRAIDQQYRP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072309

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences