Metagenome / Metatranscriptome Family F072307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072307
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	67 residues
Representative Sequence	MDNANPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Number of Associated Samples	97
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.19 %
% of genes near scaffold ends (potentially truncated)	30.58 %
% of genes from short scaffolds (< 2000 bps)	80.17 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (23.967 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.628 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 0.00% Coil/Unstructured: 87.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00271	Helicase_C	9.09
PF00118	Cpn60_TCP1	8.26
PF00072	Response_reg	8.26
PF02518	HATPase_c	4.13
PF13545	HTH_Crp_2	3.31
PF00166	Cpn10	2.48
PF00282	Pyridoxal_deC	2.48
PF01594	AI-2E_transport	1.65
PF06745	ATPase	1.65
PF06283	ThuA	1.65
PF13188	PAS_8	0.83
PF07689	KaiB	0.83
PF00180	Iso_dh	0.83
PF00174	Oxidored_molyb	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	8.26
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	2.48
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	2.48
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.65
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	1.65
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.83
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.94 %
Unclassified	root	N/A	4.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	59.50 %
Unclassified	root	N/A	4.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.68 %
Unclassified	root	N/A	4.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.68 %
Unclassified	root	N/A	4.13 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.68 %
Unclassified	root	N/A	4.13 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100169842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300000571\|JGI1358J11329_10222640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300002886\|JGI25612J43240_1001629	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300004114\|Ga0062593_101232212	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005177\|Ga0066690_10243534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300005187\|Ga0066675_10428817	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300005345\|Ga0070692_10010264	All Organisms → cellular organisms → Bacteria	4256	Open in IMG/M
3300005406\|Ga0070703_10351309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300005436\|Ga0070713_100043532	All Organisms → cellular organisms → Bacteria → Acidobacteria	3671	Open in IMG/M
3300005438\|Ga0070701_10090715	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300005440\|Ga0070705_100062767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2213	Open in IMG/M
3300005440\|Ga0070705_100669238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300005444\|Ga0070694_100210890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300005444\|Ga0070694_100736260	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005445\|Ga0070708_100152645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2149	Open in IMG/M
3300005445\|Ga0070708_100755220	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005454\|Ga0066687_10208741	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300005468\|Ga0070707_100041493	All Organisms → cellular organisms → Bacteria	4404	Open in IMG/M
3300005468\|Ga0070707_100426371	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300005468\|Ga0070707_100537671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300005471\|Ga0070698_100011190	All Organisms → cellular organisms → Bacteria	9535	Open in IMG/M
3300005471\|Ga0070698_100818981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300005526\|Ga0073909_10484566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005529\|Ga0070741_10333291	Not Available	1413	Open in IMG/M
3300005536\|Ga0070697_100560538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300005545\|Ga0070695_100208280	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300005545\|Ga0070695_100498396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300005545\|Ga0070695_100581623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300005549\|Ga0070704_100107926	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300005549\|Ga0070704_100370963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300005615\|Ga0070702_101873243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	502	Open in IMG/M
3300006028\|Ga0070717_10108584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2364	Open in IMG/M
3300006049\|Ga0075417_10738264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006579\|Ga0074054_11714859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300006794\|Ga0066658_10037747	All Organisms → cellular organisms → Bacteria → Acidobacteria	2007	Open in IMG/M
3300006852\|Ga0075433_11607447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300006854\|Ga0075425_100892013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300009012\|Ga0066710_102392865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300009090\|Ga0099827_10139155	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300009137\|Ga0066709_100346435	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300009137\|Ga0066709_101993760	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300009143\|Ga0099792_10414780	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300009147\|Ga0114129_10236174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2459	Open in IMG/M
3300009176\|Ga0105242_10608206	Not Available	1057	Open in IMG/M
3300010154\|Ga0127503_11127107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010364\|Ga0134066_10392585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300010399\|Ga0134127_13453775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300010401\|Ga0134121_12230255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300010403\|Ga0134123_10463779	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300011398\|Ga0137348_1000786	All Organisms → cellular organisms → Bacteria	5000	Open in IMG/M
3300011405\|Ga0137340_1002840	All Organisms → cellular organisms → Bacteria	3228	Open in IMG/M
3300011423\|Ga0137436_1065427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300011425\|Ga0137441_1131091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300011427\|Ga0137448_1066116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012166\|Ga0137350_1073395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012203\|Ga0137399_10085281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2408	Open in IMG/M
3300012207\|Ga0137381_10117784	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300012208\|Ga0137376_10180801	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300012212\|Ga0150985_111859941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012285\|Ga0137370_10543125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012685\|Ga0137397_11282637	Not Available	522	Open in IMG/M
3300012922\|Ga0137394_10476417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300012944\|Ga0137410_11288194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300014865\|Ga0180078_1027896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300015245\|Ga0137409_10556193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300015248\|Ga0180079_1041618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300015371\|Ga0132258_11771093	All Organisms → cellular organisms → Bacteria → Acidobacteria	1557	Open in IMG/M
3300015371\|Ga0132258_12329255	Not Available	1343	Open in IMG/M
3300015372\|Ga0132256_100489110	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300018053\|Ga0184626_10316306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300018071\|Ga0184618_10271074	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300018075\|Ga0184632_10380965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300018081\|Ga0184625_10559936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300018432\|Ga0190275_11368901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	784	Open in IMG/M
3300018482\|Ga0066669_10841723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300019263\|Ga0184647_1326646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300020065\|Ga0180113_1426578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300021080\|Ga0210382_10263011	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300021363\|Ga0193699_10002072	All Organisms → cellular organisms → Bacteria → Proteobacteria	7768	Open in IMG/M
3300021951\|Ga0222624_1445122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300025910\|Ga0207684_10304910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1373	Open in IMG/M
3300025910\|Ga0207684_10482474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300025917\|Ga0207660_10572845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300025922\|Ga0207646_10343380	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300025922\|Ga0207646_10623832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300025928\|Ga0207700_10846570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300026075\|Ga0207708_10056365	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300026118\|Ga0207675_100371553	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300026285\|Ga0209438_1004015	All Organisms → cellular organisms → Bacteria	4993	Open in IMG/M
3300026312\|Ga0209153_1048440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1501	Open in IMG/M
3300026325\|Ga0209152_10015354	All Organisms → cellular organisms → Bacteria → Acidobacteria	2628	Open in IMG/M
3300026331\|Ga0209267_1125753	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300026542\|Ga0209805_1002902	All Organisms → cellular organisms → Bacteria	9891	Open in IMG/M
3300027513\|Ga0208685_1003026	All Organisms → cellular organisms → Bacteria	5060	Open in IMG/M
3300027835\|Ga0209515_10018091	All Organisms → cellular organisms → Bacteria → Proteobacteria	6917	Open in IMG/M
3300027873\|Ga0209814_10371991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027873\|Ga0209814_10569568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027882\|Ga0209590_10428497	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300030997\|Ga0073997_10846264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300031538\|Ga0310888_10869978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031720\|Ga0307469_10043852	All Organisms → cellular organisms → Bacteria → Acidobacteria	2745	Open in IMG/M
3300031720\|Ga0307469_10512902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300031720\|Ga0307469_12300755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031740\|Ga0307468_100218765	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300031740\|Ga0307468_100655622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300031740\|Ga0307468_101009544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300031740\|Ga0307468_101830303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300031820\|Ga0307473_10847551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300032012\|Ga0310902_10871021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300032174\|Ga0307470_10154917	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300032174\|Ga0307470_11959827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300032180\|Ga0307471_100492929	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300032180\|Ga0307471_102102402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300032180\|Ga0307471_102675127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032180\|Ga0307471_103145483	Not Available	585	Open in IMG/M
3300033004\|Ga0335084_10610048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1116	Open in IMG/M
3300034090\|Ga0326723_0159806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300034176\|Ga0364931_0254064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300034417\|Ga0364941_161295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300034643\|Ga0370545_018591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1145	Open in IMG/M
3300034643\|Ga0370545_144150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.08%
Host-Associated	Host-Associated	9.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.55%
Aquatic	Environmental → Aquatic	16.53%
Plants	Host-Associated → Plants	9.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.07%
Sediment	Environmental → Aquatic → Sediment	10.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Freshwater	Environmental → Aquatic → Freshwater	5.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.31%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Peat	Environmental → Terrestrial → Peat	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.63%
Loam	Environmental → Terrestrial → Soil → Loam	25.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.31%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000571	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1001698422	3300000559	Soil	MRVPDSEIALPSSGLLIPGERERNTLTYRQPGSMGGPAFGSEIASPPSVLMEGTTIAEHEREGGGAPNTRKAR*
JGI1358J11329_102226402	3300000571	Groundwater	MDISPSTGLMIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTIAEHQREGGGAPSTRKVR*
JGI25612J43240_10016293	3300002886	Grasslands Soil	MDNTSDARPSTGLMIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0062593_1012322122	3300004114	Soil	MIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR*
Ga0066690_102435342	3300005177	Soil	MQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR*
Ga0066675_104288172	3300005187	Soil	MDKIPIPSTGRMIPGERERNTLTYRQPGSMGGPEFGSEVIGPANPLMDAVTIAERQREGGGAPSTRTKPRS*
Ga0070692_100102641	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	TDAPCRMVSPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070703_103513092	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDASTIAEHQREGGGAPRTRRAG
Ga0070713_1000435328	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LNDVCVLFGTDVLLPTVHDGVMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR*
Ga0070701_100907152	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070705_1000627674	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070705_1006692381	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0070694_1002108901	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR*
Ga0070694_1007362602	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGERERNTLTHRQSGSMGGAPAGSEIEGAAGALMDSTTIAEHQREGGGAPTTRKIR*
Ga0070708_1001526455	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGERERNTLTHRQSGSMGGAPAGSEIEGAAGALMDSTTIAEHQREGGGAPSTRKIR*
Ga0070708_1007552202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTISEHQREGGGAPSTRKVR*
Ga0066687_102087412	3300005454	Soil	MDKIPSTGRMIPGERERNTLTYRQPGSMGGPEFGSEVIGPANPLMDAVTIAERQREGGGAPSTRTKRQS*
Ga0070707_1000414932	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR*
Ga0070707_1004263712	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	METTTHPPNPSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD*
Ga0070707_1005376714	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRVR*
Ga0070698_1000111907	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR*
Ga0070698_1008189814	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTISEHQREGGGAPSTRKAR*
Ga0073909_104845662	3300005526	Surface Soil	MDTPPQSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0070741_103332912	3300005529	Surface Soil	MIPGERERNTITYRQPGSIGGPEFGSEVAAPANPLMDAVTIAEREREGGGAPSTRTTR*
Ga0070697_1005605382	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD*
Ga0070695_1002082803	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MVAPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPRTRRAG*
Ga0070695_1004983963	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSNARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070695_1005816231	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0070704_1001079262	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MVSPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHRREGGGAPSTRRAG*
Ga0070704_1003709632	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR*
Ga0070702_1018732431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	NTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS*
Ga0070717_101085846	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LNDVGVLFRTDVLLLTVHDGLMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR*
Ga0075417_107382642	3300006049	Populus Rhizosphere	AGRPNVDGMDSPSPSTGLMIPGERERNTLTRRVPGSIGGPASGSNVGGTPNKLMDDVTIAERQREGGGAPRTRKIA*
Ga0074054_117148592	3300006579	Soil	MDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066658_100377473	3300006794	Soil	MEKIIPSSGLMIPGEREPNTLTSRLPGSIGGPAFGSDVGGTPNVLMDDVTIAEHQRQGGGAPSTRRAR*
Ga0075433_116074472	3300006852	Populus Rhizosphere	MDITSGARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0075425_1008920132	3300006854	Populus Rhizosphere	METTTHPLDPSSGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTSD*
Ga0066710_1023928652	3300009012	Grasslands Soil	MDIPQPSTGLMIPGERERNTLTYRQLRSMGGPASGSAVEGAPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0099827_101391552	3300009090	Vadose Zone Soil	MDTTRPSTGLMIPGERERNTLTYRQPGSIGGPASGSDLEGPLSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066709_1003464353	3300009137	Grasslands Soil	MYIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0066709_1019937602	3300009137	Grasslands Soil	MIPGERERNTLTYRQSGSMGGPASGSELEGPPSVLMDDTTIAEHQREGGGAPSTRKVR*
Ga0099792_104147801	3300009143	Vadose Zone Soil	ERERNTLTYRQPGSMGGPEFGSEVVGPANPLMDAVTIAERQREGGGAPSTRTKRQS*
Ga0114129_102361745	3300009147	Populus Rhizosphere	MDITSDARPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRKAR*
Ga0105242_106082062	3300009176	Miscanthus Rhizosphere	MEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVQMDAVTIAEHQREGGGAPRTRRAG*
Ga0127503_111271073	3300010154	Soil	LMIPGERERNTLTYRQLGSMGGPASGSAVEGVPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0134066_103925852	3300010364	Grasslands Soil	MDIPQPSTGLMIPGERERNTLTYRQLGSMAGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0134127_134537751	3300010399	Terrestrial Soil	MEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHRREGGGAPSTRRAS*
Ga0134121_122302552	3300010401	Terrestrial Soil	SQPSTGLMIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR*
Ga0134123_104637791	3300010403	Terrestrial Soil	MEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAITIAEHQREGGGAPSTRRAG*
Ga0137348_10007861	3300011398	Soil	MDNTNSSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137340_10028401	3300011405	Soil	NTNPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137436_10654271	3300011423	Soil	NPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137441_11310913	3300011425	Soil	GERERNTLTHRQPGSMGGSASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137448_10661161	3300011427	Soil	RPTVDGMDNTNPSTGLMIPGERERNTLTHRLPGSMGGAASGSDVGGTPNKLMDDVTIAERQREGGGAPGTRKVA*
Ga0137350_10733951	3300012166	Soil	MDNTNPSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137399_100852814	3300012203	Vadose Zone Soil	MIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR*
Ga0137381_101177843	3300012207	Vadose Zone Soil	MDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGASSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0137376_101808013	3300012208	Vadose Zone Soil	MIPGERERNTLTYRQSGSMGGPASGSEVEGTPSVLMDATTIAERQREGGGAPSTRKVR*
Ga0150985_1118599412	3300012212	Avena Fatua Rhizosphere	SKPAAGLMIPGARERNTLTYRQPGSMGGPAAGSDVGGIPSVLMDPTTIAEHQREGGGAPSTRKLR*
Ga0137370_105431253	3300012285	Vadose Zone Soil	RSMDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR*
Ga0137397_112826372	3300012685	Vadose Zone Soil	MIPGERERNTLTYRQPGSMGGPAAGSNVGGTPNPLMDDATSEERRREGGGAPNT
Ga0137394_104764172	3300012922	Vadose Zone Soil	MDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAERQREGGGAPSTRKVA*
Ga0137410_112881941	3300012944	Vadose Zone Soil	MNEANLPSGRMIPGERERDTLTYRQPGSIGGPASGSDIVGATPGDLMEEATVLEHQREGGGAPSTRNAADDRRTP*
Ga0180078_10278963	3300014865	Soil	RERNTLTHRQPGSMGGSASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0137409_105561932	3300015245	Vadose Zone Soil	MDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAERQREGGGAPSTRKVP*
Ga0180079_10416183	3300015248	Soil	TGLMIPGERERNTLTRRLPGSMGGPASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA*
Ga0132258_117710931	3300015371	Arabidopsis Rhizosphere	MIPGAREPNTLTYRQPGAMGGPASGSSLGGGHTPLMDAQTLDERRREGGGLRKRR*
Ga0132258_123292553	3300015371	Arabidopsis Rhizosphere	PSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIAGPPSVLMDDTTIAEHRREGGGAPGTRTSD*
Ga0132256_1004891102	3300015372	Arabidopsis Rhizosphere	MEKTIPSSGLMIPGERERNTLTHRQPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAG*
Ga0184626_103163061	3300018053	Groundwater Sediment	VQFETDMLFPTAYGDAMDTPNPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKVA
Ga0184618_102710742	3300018071	Groundwater Sediment	MDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKVA
Ga0184632_103809652	3300018075	Groundwater Sediment	GRMIPGERERNTLTYRQPGSMGGPASGSDVGGTPNALMDDATIAERQREGGGSPSTRKVAGCRATS
Ga0184625_105599363	3300018081	Groundwater Sediment	LFPTAYRGAMDNPNPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGALSVLMDATTIAEHQREGGGAPSTRKVR
Ga0190275_113689012	3300018432	Soil	MIPGSRERNTLTYRQPGAMGGAASGASGITQGSSSMDAATIAEREREGGGGPEQRRRP
Ga0066669_108417231	3300018482	Grasslands Soil	MDIPQPSTGLMIPGERERNTLTYRQLGSMGGPASGSAVEGTPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0184647_13266464	3300019263	Groundwater Sediment	TGLMIPGERERNTLTYRQPGSMGGPASGSAVEGAQSVLMDATTIAEHQREGGGAPSTRKV
Ga0180113_14265781	3300020065	Groundwater Sediment	SSAERPTVDGMDNTNSSTGRMIPGERERNTLTRRLPGSMGGPASGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0210382_102630111	3300021080	Groundwater Sediment	MDNTNPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNALMDDVTIAEHQREGGGAPSTRKV
Ga0193699_100020728	3300021363	Soil	MDNPYPSTGLMIPGERERNTLTYRRPGSMGGPASGSDVGGTPNVLMDDVTIAERQREGGGAPSTRKVA
Ga0222624_14451221	3300021951	Groundwater Sediment	ERPTLVVVDSTDASTGLMIPGERERNTLTYRRPGSIGGPASGSDVGVTPNKLMDDVTVAEHQREGGGAPRTRKVA
Ga0207684_103049102	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGERERNTLTHRQSGSMGGPASGSEIEGAAGALMDSTTVAEHQREGGGAPGTRKIR
Ga0207684_104824743	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTSNARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0207660_105728452	3300025917	Corn Rhizosphere	MIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0207646_103433802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	METTTHPPNPSTGLMIPGERERNTLTHRQPGSMGGPEFGSEIVGPPSVLMDDTTIAEHQREGGGAPSTRTTSD
Ga0207646_106238324	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDITSDTRPSTGLMIPGERERNTLTYRQPGSVGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRKAR
Ga0207700_108465701	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LLLTVHDGVMEKSPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEVISRANPLMDAVTIAEHQREGGGPPNTRRIR
Ga0207708_100563653	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVAPWSMEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRRAG
Ga0207675_1003715534	3300026118	Switchgrass Rhizosphere	LMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0209438_10040155	3300026285	Grasslands Soil	MDNTSDARPSTGLMIPGERERNTLTYRRPGSMGGPGIGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0209153_10484402	3300026312	Soil	MMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR
Ga0209152_100153542	3300026325	Soil	MEKIIPSSGLMIPGEREPNTLTSRLPGSIGGPAFGSDVGGTPNVLMDDVTIAEHQREGGGAPSTRRAR
Ga0209267_11257532	3300026331	Soil	MQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPS
Ga0209805_10029023	3300026542	Soil	MQPVRTTDLMMPSSGLMIPGEWERKTPTRRQPGSMGGPASGSDVGGVPSVLMDAVTISEHQREGGGAPSTRKVR
Ga0208685_10030261	3300027513	Soil	NSSTGLMIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0209515_100180913	3300027835	Groundwater	MDISPSTGLMIPGERERNTLTYRQPGSMGGPASGSDLEGPLSVLMDAVTIAEHQREGGGAPSTRKVR
Ga0209814_103719913	3300027873	Populus Rhizosphere	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDATIAEHQREGGGAPSTRRAR
Ga0209814_105695681	3300027873	Populus Rhizosphere	PNVDGMDSPSPSTGLMIPGERERNTLTRRVPGSIGGPASGSNVGGTPNKLMDDVTIAERQREGGGAPRTRKIA
Ga0209590_104284971	3300027882	Vadose Zone Soil	MDTTRPSTGLMIPGERERNTLTYRQPGSIGGPASGSDLEGPLSVLMDATTIAEHQREGGGAPSTRKAR
Ga0073997_108462643	3300030997	Soil	NTLTHRRPGSIGGPASGSDVGVTPTKLMDDVTIAERQREGGGAPRTRRVT
Ga0310888_108699782	3300031538	Soil	MVPPWGMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPAVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307469_100438526	3300031720	Hardwood Forest Soil	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRVR
Ga0307469_105129021	3300031720	Hardwood Forest Soil	LARQGAAAPETKMTQPSSGLMIPGERERNTLTSRQPGSMGGPASGSDVGGVPSVLMDATTIAEHQREGGGAPSSRKGR
Ga0307469_123007552	3300031720	Hardwood Forest Soil	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307468_1002187651	3300031740	Hardwood Forest Soil	MEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPAVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307468_1006556221	3300031740	Hardwood Forest Soil	MDNTSDARPSTGLMIPGERERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGG
Ga0307468_1010095442	3300031740	Hardwood Forest Soil	MEKTSDPAPSTGLMIPGERERNTLTHRQPGSMGGAEFGWDSGQPPSVLMDDVTIAEHQREGGGAPSTRKVR
Ga0307468_1018303032	3300031740	Hardwood Forest Soil	MPQPSSGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Ga0307473_108475512	3300031820	Hardwood Forest Soil	MDNANPSTGLMIPGERERNTLTYRQPGSMGGPASGSDVGGVPSVLMDPTTIAEHQREGGGAPSTRKVR
Ga0310902_108710212	3300032012	Soil	MEQTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPGVLMDAVTIAEHQREGGGAPSTRRAS
Ga0307470_101549173	3300032174	Hardwood Forest Soil	MEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRRAG
Ga0307470_119598271	3300032174	Hardwood Forest Soil	ERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307471_1004929292	3300032180	Hardwood Forest Soil	MIPGERERNTLTYRQPGSMGGPASGSEVPGASVLMDAVTIAEHQREGGGAPRTRKQR
Ga0307471_1021024021	3300032180	Hardwood Forest Soil	RERNTLTYRQPGSIGGPEFGSDSGQPPSVLMDDVTIAEHQREGGGAPSTRRAR
Ga0307471_1026751272	3300032180	Hardwood Forest Soil	MAPPWGMEKTIPSSGLMIPGERERNTLTHRLPGSIGGPEFGSDVGGTPSVLMDAVTIAEHQREGGGAPSTRQAG
Ga0307471_1031454832	3300032180	Hardwood Forest Soil	MIPGARERNTLTYRQPGSMSGAAAGSDVGGTPNALMDDATIEERRREGGGAPNTRKVA
Ga0335084_106100483	3300033004	Soil	MEKLPSSGLMIPGERERNTLTYRQPGSIGGPEFGSEITGPANPLMDAVTIAEHQREGGGAPSTRKTR
Ga0326723_0159806_809_985	3300034090	Peat Soil	MIPGARERNTLTYRQPGSMGGPASGSTVEGAQSVLMDATTIAEHQREGGGAPSTRKVR
Ga0364931_0254064_29_205	3300034176	Sediment	MIPGERERNTLTHRLPGSMGGPAFGSDVGGTPNKLMDDVTIAEHQREGGGAPRTRKVA
Ga0364941_161295_36_242	3300034417	Sediment	MDTPQQSSGLMIPGERERNTLTYRQLGSMGGPASGSAVEGALSVLMDATTIAEHQREGGGAPSTRKVR
Ga0370545_018591_3_170	3300034643	Soil	GERERNTLTYRQLGSMGGPASGSAVEGVPSVLMDATTIAEHQREGGGAPSTRKVR
Ga0370545_144150_21_224	3300034643	Soil	MDDNPSTGLMIPGERERNTLTYRRPGSIGGPASGSDLGVTPNKLMDDVTIAEHQREGGGATSTRKVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences