Metagenome / Metatranscriptome Family F072302

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072302
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	77 residues
Representative Sequence	VTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Number of Associated Samples	91
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.07 %
% of genes near scaffold ends (potentially truncated)	19.01 %
% of genes from short scaffolds (< 2000 bps)	84.30 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.380 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (28.926 % of family members)
Environment Ontology (ENVO)	Unclassified (21.488 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.851 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.45% β-sheet: 13.08% Coil/Unstructured: 50.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04672	Methyltransf_19	68.60
PF13560	HTH_31	2.48
PF10935	DUF2637	1.65
PF02467	Whib	0.83
PF13604	AAA_30	0.83
PF06490	FleQ	0.83
PF12728	HTH_17	0.83
PF00589	Phage_integrase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2204	DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains	Signal transduction mechanisms [T]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.38 %
Unclassified	root	N/A	25.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.38 %
Unclassified	root	N/A	25.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.38 %
Unclassified	root	N/A	25.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.55 %
Unclassified	root	N/A	25.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.73 %
Unclassified	root	N/A	25.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	68.60 %
Unclassified	root	N/A	25.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.62 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	16.53 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.44 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.62 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	16.53 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.31 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.62 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	16.53 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.31 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.62 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	16.53 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.31 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102317391	Not Available	1003	Open in IMG/M
3300004091\|Ga0062387_100040483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2151	Open in IMG/M
3300004479\|Ga0062595_100190135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1255	Open in IMG/M
3300005171\|Ga0066677_10757894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539	Open in IMG/M
3300005187\|Ga0066675_11457300	Not Available	500	Open in IMG/M
3300005332\|Ga0066388_108223891	Not Available	521	Open in IMG/M
3300005336\|Ga0070680_101509991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300005434\|Ga0070709_11360978	Not Available	574	Open in IMG/M
3300005435\|Ga0070714_100019866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5480	Open in IMG/M
3300005435\|Ga0070714_100420102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1266	Open in IMG/M
3300005436\|Ga0070713_100560083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1083	Open in IMG/M
3300005437\|Ga0070710_11077373	Not Available	589	Open in IMG/M
3300005467\|Ga0070706_100028181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	5169	Open in IMG/M
3300005467\|Ga0070706_100681886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	953	Open in IMG/M
3300005468\|Ga0070707_100035248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4773	Open in IMG/M
3300005471\|Ga0070698_101207202	Not Available	706	Open in IMG/M
3300005549\|Ga0070704_102257483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	506	Open in IMG/M
3300005576\|Ga0066708_11009613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300005614\|Ga0068856_100988801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	860	Open in IMG/M
3300005618\|Ga0068864_102523223	Not Available	520	Open in IMG/M
3300006028\|Ga0070717_10130391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2161	Open in IMG/M
3300006605\|Ga0074057_11233340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	634	Open in IMG/M
3300006755\|Ga0079222_11931163	Not Available	577	Open in IMG/M
3300006797\|Ga0066659_11100171	Not Available	664	Open in IMG/M
3300006800\|Ga0066660_10972218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300006804\|Ga0079221_10024035	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300006804\|Ga0079221_11125694	Not Available	603	Open in IMG/M
3300006806\|Ga0079220_10624572	Not Available	772	Open in IMG/M
3300006871\|Ga0075434_100738987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1001	Open in IMG/M
3300006954\|Ga0079219_10621683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300007076\|Ga0075435_101337217	Not Available	628	Open in IMG/M
3300009012\|Ga0066710_102314779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300009089\|Ga0099828_11479953	Not Available	599	Open in IMG/M
3300009098\|Ga0105245_11814335	Not Available	663	Open in IMG/M
3300009137\|Ga0066709_101573729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300009143\|Ga0099792_10665578	Not Available	670	Open in IMG/M
3300009521\|Ga0116222_1079204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1418	Open in IMG/M
3300009522\|Ga0116218_1262966	Not Available	774	Open in IMG/M
3300009523\|Ga0116221_1272308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300009524\|Ga0116225_1058496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1839	Open in IMG/M
3300009524\|Ga0116225_1198976	Not Available	906	Open in IMG/M
3300009545\|Ga0105237_11966193	Not Available	593	Open in IMG/M
3300009551\|Ga0105238_11185030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300009672\|Ga0116215_1084790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1423	Open in IMG/M
3300009672\|Ga0116215_1157442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1008	Open in IMG/M
3300009672\|Ga0116215_1168917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	969	Open in IMG/M
3300009672\|Ga0116215_1209083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	858	Open in IMG/M
3300009698\|Ga0116216_10390865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300009698\|Ga0116216_10445085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	785	Open in IMG/M
3300009700\|Ga0116217_10346116	Not Available	949	Open in IMG/M
3300010375\|Ga0105239_10947791	Not Available	988	Open in IMG/M
3300010379\|Ga0136449_100078693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6975	Open in IMG/M
3300010379\|Ga0136449_100820090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1533	Open in IMG/M
3300010379\|Ga0136449_101242964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300010379\|Ga0136449_101599356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	990	Open in IMG/M
3300010379\|Ga0136449_101600254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	989	Open in IMG/M
3300010379\|Ga0136449_101818591	Not Available	910	Open in IMG/M
3300010379\|Ga0136449_102292250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	783	Open in IMG/M
3300010379\|Ga0136449_102458650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	749	Open in IMG/M
3300010396\|Ga0134126_10450314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1490	Open in IMG/M
3300010396\|Ga0134126_10694357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1157	Open in IMG/M
3300010400\|Ga0134122_12060367	Not Available	610	Open in IMG/M
3300012198\|Ga0137364_10654540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300012200\|Ga0137382_11023913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300012202\|Ga0137363_10202967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1591	Open in IMG/M
3300012203\|Ga0137399_11441193	Not Available	575	Open in IMG/M
3300012206\|Ga0137380_10858200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300012209\|Ga0137379_10424852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300012354\|Ga0137366_11165210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300012515\|Ga0157338_1009988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300012985\|Ga0164308_11934550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300013296\|Ga0157374_12727071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300014164\|Ga0181532_10027756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3981	Open in IMG/M
3300014325\|Ga0163163_10568336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1197	Open in IMG/M
3300015264\|Ga0137403_10185844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2021	Open in IMG/M
3300015371\|Ga0132258_10051366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9433	Open in IMG/M
3300015371\|Ga0132258_13967657	Not Available	1005	Open in IMG/M
3300015372\|Ga0132256_100042731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4171	Open in IMG/M
3300015374\|Ga0132255_100161656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3134	Open in IMG/M
3300017946\|Ga0187879_10160857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1267	Open in IMG/M
3300018433\|Ga0066667_10188919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1501	Open in IMG/M
3300018482\|Ga0066669_11562423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300021178\|Ga0210408_10285867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1315	Open in IMG/M
3300021178\|Ga0210408_10610008	Not Available	864	Open in IMG/M
3300021403\|Ga0210397_10453332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	966	Open in IMG/M
3300021478\|Ga0210402_10371586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1327	Open in IMG/M
3300021860\|Ga0213851_1753451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	743	Open in IMG/M
3300025527\|Ga0208714_1096868	Not Available	586	Open in IMG/M
3300025898\|Ga0207692_10147563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1344	Open in IMG/M
3300025898\|Ga0207692_10610890	Not Available	702	Open in IMG/M
3300025910\|Ga0207684_10022748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5351	Open in IMG/M
3300025916\|Ga0207663_10907736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	704	Open in IMG/M
3300025928\|Ga0207700_10082571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2513	Open in IMG/M
3300025929\|Ga0207664_10327739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1352	Open in IMG/M
3300026316\|Ga0209155_1241125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	560	Open in IMG/M
3300026551\|Ga0209648_10169311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1704	Open in IMG/M
3300027625\|Ga0208044_1133624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300027783\|Ga0209448_10077242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300027795\|Ga0209139_10298636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300027854\|Ga0209517_10366179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	820	Open in IMG/M
3300027854\|Ga0209517_10430252	Not Available	734	Open in IMG/M
3300027875\|Ga0209283_10753376	Not Available	603	Open in IMG/M
3300027905\|Ga0209415_10092925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3368	Open in IMG/M
3300027905\|Ga0209415_10685925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300028828\|Ga0307312_10263659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M
3300028885\|Ga0307304_10485559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300030494\|Ga0310037_10215514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	846	Open in IMG/M
3300030707\|Ga0310038_10195398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970	Open in IMG/M
3300031708\|Ga0310686_109022690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300032160\|Ga0311301_10026719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15455	Open in IMG/M
3300032160\|Ga0311301_10061537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8185	Open in IMG/M
3300032160\|Ga0311301_10533369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1724	Open in IMG/M
3300032160\|Ga0311301_10580163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1626	Open in IMG/M
3300032160\|Ga0311301_10633013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1529	Open in IMG/M
3300032160\|Ga0311301_10754705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1350	Open in IMG/M
3300032160\|Ga0311301_12136348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	646	Open in IMG/M
3300032160\|Ga0311301_12959077	Not Available	512	Open in IMG/M
3300032783\|Ga0335079_10145292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2664	Open in IMG/M
3300032783\|Ga0335079_10319467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1690	Open in IMG/M
3300032828\|Ga0335080_10225582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2054	Open in IMG/M
3300032828\|Ga0335080_11642884	Not Available	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.60%
Host-Associated	Host-Associated	12.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.64%
Plants	Host-Associated → Plants	12.40%
Aquatic	Environmental → Aquatic	4.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.61%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.96%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.98%
Loam	Environmental → Terrestrial → Soil → Loam	17.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	28.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1023173911	3300000956	Soil	VTPRSSAQVPLVLDGDDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0062387_1000404834	3300004091	Bog Forest Soil	VRPRSPAQVSPVLDGEDQVARLERFRATFPDVPVLLLAACPRAWVGAQKIEHPTLRGLLDDLEEIFRPDACTSRAGTPQ*
Ga0062595_1001901352	3300004479	Soil	VTPRSPAQVSVVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066677_107578941	3300005171	Soil	VTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLNDLEEIFRPDTHASRAETPR*
Ga0066675_114573001	3300005187	Soil	VTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLNDLEEIFRPDTH
Ga0066388_1082238911	3300005332	Tropical Forest Soil	VTPRSAAQVPLVQDGEHQAAQLERFRAAHPDVPVLLLGDCPRAWVGGQKIEHPTLCGLLDDLEEMFRPDTHASRTETPQ*
Ga0070680_1015099912	3300005336	Corn Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRARTPQ*
Ga0070709_113609782	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRASYPDVPVLLLGTRPRAWIGGQKIEHPTLRGLLDDLEEIFRRDTHASHPGTLQ*
Ga0070714_1000198663	3300005435	Agricultural Soil	VTPRSPAQMSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ*
Ga0070714_1004201023	3300005435	Agricultural Soil	VTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0070713_1005600832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIPGSHAALSAAPEEDQVPRLERFRAAHSDVPVLLVGICPKAWVGDQKIEHPRLRGLLDGLEEIFGPDPQARHAGGSQ*
Ga0070710_110773732	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EDPGALAGDAVTSRNPAQMSLVPDGEDQAARLEQFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ*
Ga0070706_1000281819	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTPRSAAQVPLVQDDEDQAARLERFRTTHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ*
Ga0070706_1006818862	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSAAQVPPVQDGEDQIMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHLTLRGLLDELEEIFRPDVRTARTEIPR*
Ga0070707_1000352484	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ*
Ga0070698_1012072023	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSAAQVPPVQDGEDQIMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHLTLRGLLDELEEIFRPDVRTA
Ga0070704_1022574831	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066708_110096131	3300005576	Soil	VTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR*
Ga0068856_1009888012	3300005614	Corn Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0068864_1025232231	3300005618	Switchgrass Rhizosphere	VTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRA
Ga0070717_101303913	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSPARMSVVSDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRPGAHNSCTGRRSDR*
Ga0074057_112333402	3300006605	Soil	VTPRSPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRMRTPQ*
Ga0079222_119311631	3300006755	Agricultural Soil	VTPRSPAQMSVVPDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVGGQKVEHPTLRGLLDGLEEIFSPGARTSRTRTAQ*
Ga0066659_111001712	3300006797	Soil	VTPRSAAQVSLVLDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRAETPR*
Ga0066660_109722181	3300006800	Soil	AGDAVTPRSPAQVPLVQDGEDQAARLDRFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR*
Ga0079221_100240353	3300006804	Agricultural Soil	MSVIPDGEDQAARLEQFRTAHPDVPVLLLGDYTRAWVAGEKVEHTTLRGLFDGLEEILRPGTRNSCTGAAQ*
Ga0079221_111256942	3300006804	Agricultural Soil	VTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDKHAS
Ga0079220_106245723	3300006806	Agricultural Soil	VTPRSPARMSVIPDGEDQAARLEQFRTGHPGVPVLLLGDYPRAWVAGEKVEHTTLRGLLDGLEEIL
Ga0075434_1007389873	3300006871	Populus Rhizosphere	VTPRSPAQMSLIPDDEDQVARLDQFCAAHPDVPVLLLGDRPRAWVGDQKVEHSTLRDLLDGLEEIFRLGARTSRTRTTQ*
Ga0079219_106216832	3300006954	Agricultural Soil	AGDAVTPRSPAQMSVVPDGEDQAARLEQFRTAHPDVPVLLLGDYPRAWVGGQKVEHPTLRGLLDGLEEIFSPGARTSHTRTAQ*
Ga0075435_1013372172	3300007076	Populus Rhizosphere	MTGTAKAGTAGKMLTLVLDGEDQTARLERFRATHPDVPVLLMGTRLRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRT
Ga0066710_1023147792	3300009012	Grasslands Soil	VTPRSAAQVSLVLDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR
Ga0099828_114799532	3300009089	Vadose Zone Soil	MTPRSPAPVSLVLDGEDQAARLERFRVTHPDVPVLLLGACPKAWVGDQKIEHRTLRGLLDDLEEILRPDADTSRTGTPQ*
Ga0105245_118143352	3300009098	Miscanthus Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0066709_1015737293	3300009137	Grasslands Soil	VTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRTETPR*
Ga0099792_106655781	3300009143	Vadose Zone Soil	VCLVLDGEDQVARLERIRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRSDARTSRPGTPQ*
Ga0116222_10792041	3300009521	Peatlands Soil	VSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ*
Ga0116218_12629661	3300009522	Peatlands Soil	MTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIVRPDAHISRTRT
Ga0116221_12723082	3300009523	Peatlands Soil	SLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0116225_10584962	3300009524	Peatlands Soil	VIPGSHAGLPAAPDEQDQARRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR*
Ga0116225_11989763	3300009524	Peatlands Soil	MTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ*
Ga0105237_119661931	3300009545	Corn Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDA
Ga0105238_111850302	3300009551	Corn Rhizosphere	VTRRSAAQVPPVQDGEHQAARLERFRATHPDVPVLLTGTCPRAWVGGQKLEHPTLRGLLDDLEEIFRSGARTSRTRTTQ*
Ga0116215_10847902	3300009672	Peatlands Soil	VTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTAQ*
Ga0116215_11574422	3300009672	Peatlands Soil	VIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR*
Ga0116215_11689172	3300009672	Peatlands Soil	VSLAPDGEDEVARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0116215_12090831	3300009672	Peatlands Soil	PGALAGDAVTPHSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW*
Ga0116216_103908652	3300009698	Peatlands Soil	VIPDSHAALPAAPDEQDQVPRLERFRAAHPGVVILLLGTCPRAWADGQRIERPTLRGLLDGLEEIFRPDAQASHGGGSP*
Ga0116216_104450852	3300009698	Peatlands Soil	VSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ*
Ga0116217_103461163	3300009700	Peatlands Soil	VSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0105239_109477912	3300010375	Corn Rhizosphere	VTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEMFRPRARTSCTRIPQ*
Ga0136449_1000786934	3300010379	Peatlands Soil	VSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ*
Ga0136449_1008200902	3300010379	Peatlands Soil	MSLVPDGEDQAARLERFRTAHPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTWTPQ*
Ga0136449_1012429642	3300010379	Peatlands Soil	VIPGSHAALSAAPDEQDQARRLERFRAAHPDVVILLLGACPKAWVGDQEIEHPTLRGLLDDLEEIVRPDAHTSRTGTPQ*
Ga0136449_1015993563	3300010379	Peatlands Soil	VIPGRHTALSATPVEQDPVRRLERFRAAHPDVVILLLGTCPRAWVDGQRIEHPTLRGLLDRLEEIYHPDPQASHAGGSR*
Ga0136449_1016002542	3300010379	Peatlands Soil	VIPGSHAGLPAAPDEQDQARRLERFRAAHPGVVILLLGTCPRAWADGQRIEHPTLRGLEEIVRPDAQASQAGGSQ*
Ga0136449_1018185913	3300010379	Peatlands Soil	VIPGSHAALSAAPDEQDQARRLERFRATYPGVPVLLLGARPKAWVGDQKIENPTLRGLLDDLEEIFRPDAHTSRTGTPQ*
Ga0136449_1022922502	3300010379	Peatlands Soil	PLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW*
Ga0136449_1024586502	3300010379	Peatlands Soil	VSLAPDGEDEVARLERFRAAHPGVPVLLLGTCPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ*
Ga0134126_104503143	3300010396	Terrestrial Soil	LVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRARTPQ*
Ga0134126_106943572	3300010396	Terrestrial Soil	LAGDAVTTRSPAQMSLVPDDEDQDVRLDQFRAAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCRGTAQ*
Ga0134122_120603672	3300010400	Terrestrial Soil	LVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0137364_106545402	3300012198	Vadose Zone Soil	VTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRAETPR*
Ga0137382_110239132	3300012200	Vadose Zone Soil	MSLVPDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLDDLEETFRPDAHASRPGTPQ*
Ga0137363_102029673	3300012202	Vadose Zone Soil	MSLVPDGEDQAARLERFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDALTSHTGTPQ*
Ga0137399_114411931	3300012203	Vadose Zone Soil	MSLVPDGEDQAARLERFRAAYPDVPVLLLGTYPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ*
Ga0137380_108582002	3300012206	Vadose Zone Soil	VTSRSPAQVPLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEETFRPDAHASRPGTPQ*
Ga0137379_104248522	3300012209	Vadose Zone Soil	VPLVQDGEDQAARLERFRATHPDVPVLLMGTRPTAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRAETPR*
Ga0137366_111652102	3300012354	Vadose Zone Soil	VPLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVGAQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ*
Ga0157338_10099882	3300012515	Arabidopsis Rhizosphere	VTPRNSAQVPLVQDGEDQAARLDRFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0164308_119345502	3300012985	Soil	VTSRSPAQVSLVLDGEDQAARLERFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEMFRPDTHASRTETPQ*
Ga0157374_127270712	3300013296	Miscanthus Rhizosphere	EDPGALAGDAVTPRNPAQVSLVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSCTRPPQ*
Ga0181532_100277565	3300014164	Bog	MTPRSPAQVPLVEDGEDQAARLERFRAVHPGVPVLLLGACPRAWIGDQKIENPTLSGLLDDLEEIFRPDAHASRTGTPQ*
Ga0163163_105683362	3300014325	Switchgrass Rhizosphere	MSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ*
Ga0137403_101858444	3300015264	Vadose Zone Soil	MSLVPDGEDQAARLERFRTAHPDVPVLLLGTCPRAWVGDQKIEGPTVRGLLDGLEKIFRPDASTSYTGTPQ*
Ga0132258_100513668	3300015371	Arabidopsis Rhizosphere	VTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRPETPQ*
Ga0132258_139676571	3300015371	Arabidopsis Rhizosphere	VSLVLDGEDQVARLERFRATHPDVPVLLLGTRPRAWVGGQRLEHPTLRGLLDDLEEILRPDERTSRTRIPQ*
Ga0132256_1000427317	3300015372	Arabidopsis Rhizosphere	VTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLFDDLEEIFRPDTHASRPETPQ*
Ga0132255_1001616564	3300015374	Arabidopsis Rhizosphere	VTPRNSAQVPLVLDGDDQAARLEWFRATHPDVPVLLLGTRPRAWVGGQKIEHPTLRGLFDDLEEIFRPDTHASRPETPQ*
Ga0187879_101608573	3300017946	Peatland	MTPRSPAQVPLVEDGEDQAARLERFRAVHPGVPVLLLGACPRAWIGDQKIENPTLSGLLDDLEEIFRPDAHASRTGTPQ
Ga0066667_101889192	3300018433	Grasslands Soil	VTPRSAAQVPLVRDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPR
Ga0066669_115624232	3300018482	Grasslands Soil	VIPGSHAALSAAPDEEDQVPRLERFRAAHPDVPVLLLGTCPKAWVGDQKIEHPTLCGLLDGLEETFCPDPQARHAGGSQ
Ga0210408_102858672	3300021178	Soil	VTPRSAAQVPLVQEGEHQAARLERFRATYPDVPVLLIGACPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ
Ga0210408_106100083	3300021178	Soil	VTPRSPAQVPPVQDGADQAARLERFRTTHPDVPVLLMGTRPRAWVGGQKIEHPTLRRLLDDLEEMFRPDTHASRTETPQ
Ga0210397_104533322	3300021403	Soil	VTPRSAAQVLLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETP
Ga0210402_103715862	3300021478	Soil	VTPRSPAQVSLVLDGEDQVSRLERFRATHPEVPVLLLGTRPRAWVGDQKLEHPTLRGLLDDLEEIFRPGARTSRPGTPQ
Ga0213851_17534511	3300021860	Watersheds	LVLDGEDEVIRLERFRVTHPDVPVLLLGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPDAHTSGTETPQ
Ga0208714_10968681	3300025527	Arctic Peat Soil	MTPRSPAQVSLVGDGEDQAARLERFRAAHPGVPVLLLGACPKAWVDGQKIENRTLRSLLDDLEEFFRPDARISRTGTPK
Ga0207692_101475632	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSPAQVSVVLDGEDQVARLERFRATYPDVPVLLLGTRPRAWVGGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Ga0207692_106108902	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSLVPDGEDQAARLEQFRAAYPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTGTPQ
Ga0207684_100227483	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRSPAQVPLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLRGLLDDLEEIFRPDTHASRTETPQ
Ga0207663_109077362	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSLVPDDEDQVARLDQFRAAHPDVPVLLLGDRPTAWVGDQKVEHSTLRDLLDGLEEILRPGARTSCTRTAQ
Ga0207700_100825714	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VIPGSHAALSAAPEEDQVPRLERFRAAHSDVPVLLVGICPKAWVGDQKIEHPRLRGLLDGLEEIFGPDPQARHAGGSQ
Ga0207664_103277393	3300025929	Agricultural Soil	MSVVPDGEDQTARLEQFRTAHPDVPVLLLGDYPRAWVAGQKVEHTTLRGLLDDLEEILRSGARNSCTGAAQ
Ga0209155_12411251	3300026316	Soil	VIPGSHAALSAAPDEEDQVPRLERFRAAHPDVPVLLLGTCPKAWVGDQKIEHPTLCGLLDGLEETFCPAATRSGLSRHGNGCASTS
Ga0209648_101693113	3300026551	Grasslands Soil	MTPRSPAQVPLVPDGEDQAARLERFRATHLDVPVLLLGACPKAWVGDQKIENPTLRGLLDDLEEIFHPDAPTSCTGTPQ
Ga0208044_11336242	3300027625	Peatlands Soil	MTPRSPAQVSLVADGEDQAARLKQFRATHPHVPVLLLGACPKAWVGDQKIENRTLRGLLDDLEEIFRPDAHISRTRTPQ
Ga0209448_100772421	3300027783	Bog Forest Soil	VIPGSHAALPAAPGEEEDQVQRLERFRATHPGVIILLLGTCPRARVDGQRIERPTLRGLLDGLEEIVHSD
Ga0209139_102986362	3300027795	Bog Forest Soil	VRPRSPAQVSPVLDGEDQVARLERFRATFPDVPVLLLAACPRAWVGAQKIEHPTLRGLLDDLEEIFRPDACTSRAGTPQ
Ga0209517_103661793	3300027854	Peatlands Soil	VTPRSPAQVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0209517_104302521	3300027854	Peatlands Soil	VIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPR
Ga0209283_107533762	3300027875	Vadose Zone Soil	MTPRSPAPVSLVLDGEDQAARLERFRVTHPDVPVLLLGACPKAWVGDQKIEHRTLRGLLDDLEEILRPDADTSRTGTPQ
Ga0209415_100929254	3300027905	Peatlands Soil	VIPGSDAALCAAPDEQDQVPRLERFRAAHPGAVIVLLGTCPTAWVGGQRIQRSTLRGLPGGLEEISRPDPRASHAGGSR
Ga0209415_106859252	3300027905	Peatlands Soil	PRSPAQVSLVLDGEDQAARLERFRAAHPGVPVLLLGACPRAWVGDQKVEHRTLRGLLDDLEEIFYPAARTSRKEAPQ
Ga0307312_102636593	3300028828	Soil	VTPRSAAQVTLVQDGEDQAARLERFRATHPDVPVLLMGTRPRAWVGGQKIEHPTLHGLLDDLEEIFRPDTHASRTETPQ
Ga0307304_104855591	3300028885	Soil	QVSLVLDAEDQVARLERFRATHPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTPQ
Ga0310037_102155142	3300030494	Peatlands Soil	VIPDSHAALPAAPDEQDQVPRLERFRAAHPGVVILLLGTCPRAWADGQRIERPTLRGLLDGLEEIFRPDAQASHGGGSP
Ga0310038_101953982	3300030707	Peatlands Soil	VTPDSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPDVRIARTETLW
Ga0310686_1090226902	3300031708	Soil	VIPGSHAALPAAPDEQDQAPRLERFRAAHPDVPVLLLGACPKAWVGDQKIEHPTLRGLLDDLEEIFRPDARASRTETPR
Ga0311301_100267198	3300032160	Peatlands Soil	VTPHSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKFEHPTLRGLLDDLEEIFRPDVRIARTETLW
Ga0311301_100615377	3300032160	Peatlands Soil	VTPRSPAQVSLVLDGEDQAARLERFRATYPDVPVLLLGTRPRAWVSGQKLEHPTLRGLLDDLEEIFRPDARTSRTRTAQ
Ga0311301_105333692	3300032160	Peatlands Soil	VTPRSPAQVSLAPDGEDEVARLERFRAAHPGVPVLLLGTCPKAWVGDQKIENRTLRGLLDDLEEIVRQDAHTSRAGTPQ
Ga0311301_105801633	3300032160	Peatlands Soil	VTPRSPAQLSLVTDGEDQAARLERFRAAHPDVPVLLLGTCPRAWVGDQKIERPTLRGLLDGLEKIFRPDARTSHTWTPQ
Ga0311301_106330132	3300032160	Peatlands Soil	VIPGSHAGLPAAPDEQDQARRLERFRAAHPGVVILLLGTCPRAWADGQRIEHPTLRGLEEIVRPDAQASQAGGSQ
Ga0311301_107547052	3300032160	Peatlands Soil	VIPGSHAALSAAPDEQDQARRLERFRAAHPDVVILLLGACPKAWVGDQEIEHPTLRGLLDDLEEIVRPDAHTSRTGTPQ
Ga0311301_121363482	3300032160	Peatlands Soil	VIPGRHTALSATPVEQDPVRRLERFRAAHPDVVILLLGTCPRAWVDGQRIEHPTLRGLLDRLEEIYHPDPQASHAGGSR
Ga0311301_129590771	3300032160	Peatlands Soil	VTPDSAAHVPLVRDGEDQVMRLEQFRVAHPDVPVLLMGACPRAWVGDQKIEHPTLRGLLDDLEEIFRPGVRIARTETLR
Ga0335079_101452922	3300032783	Soil	VTPRSSAQVPLVLHGDDQAAQLERFRATHPEVPVLLMGTRPRAWVGCQKIEHPTLRGLLDDLEEIFRRDTRVSRPGTPQ
Ga0335079_103194673	3300032783	Soil	MSLVPGDEDQVARLDQFRAAHPDVPVLLLGDRPRAGVGDQKVEHSTLRDLLDGLEEIFRLSARTARTRTTQ
Ga0335080_102255823	3300032828	Soil	VTPRSPAQMSLVPGDEDQVARLDQFRAAHPDVPVLLLGDRPRAGVGDQKVEHSTLRDLLDGLEEIFRLSARTARTRTTQ
Ga0335080_116428843	3300032828	Soil	VTPRSPGQVFLVPDGEDQTARLERFRATHPDVPVLLLGTRPRAWVGDQKFEQPTLRGLLDDLEEIFRPDARTSRTRTSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072302

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences