Metagenome / Metatranscriptome Family F072301

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072301
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	46 residues
Representative Sequence	MTFKKPTRAGLLALALGVLFALFLSMSVIDRSYAEEAAAPAAA
Number of Associated Samples	112
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	84.30 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.678 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.355 % of family members)
Environment Ontology (ENVO)	Unclassified (25.620 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.25% β-sheet: 0.00% Coil/Unstructured: 57.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00543	P-II	80.99
PF00909	Ammonium_transp	16.53
PF13622	4HBT_3	1.65

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	80.99
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	16.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.68 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.02 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	55.37 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	54.55 %
Unclassified	root	N/A	41.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	37.19 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	36.36 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	23.14 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	22.31 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.32 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	22.31 %
Rhizobium etli CNPAF512	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	1.65 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.65 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.83 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0331076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	632	Open in IMG/M
3300000546\|LJNas_1025897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	627	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1060515	Not Available	556	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1006411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1911	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1050590	Not Available	547	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1041809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	829	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1093394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	528	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10033607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1195	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10073170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	738	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10078976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	705	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1050839	Not Available	585	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1038591	Not Available	749	Open in IMG/M
3300001661\|JGI12053J15887_10428535	Not Available	634	Open in IMG/M
3300002914\|JGI25617J43924_10157349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	776	Open in IMG/M
3300003911\|JGI25405J52794_10069506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	768	Open in IMG/M
3300004463\|Ga0063356_105980896	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300005332\|Ga0066388_102217209	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005332\|Ga0066388_103843468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	766	Open in IMG/M
3300005365\|Ga0070688_100359039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1069	Open in IMG/M
3300005366\|Ga0070659_100021511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4913	Open in IMG/M
3300005444\|Ga0070694_101910855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	507	Open in IMG/M
3300005455\|Ga0070663_102096850	Not Available	509	Open in IMG/M
3300005575\|Ga0066702_10683946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	612	Open in IMG/M
3300005618\|Ga0068864_100468310	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300005764\|Ga0066903_106733873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	597	Open in IMG/M
3300005937\|Ga0081455_10049322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3630	Open in IMG/M
3300006606\|Ga0074062_10034676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1079	Open in IMG/M
3300006914\|Ga0075436_100683204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	760	Open in IMG/M
3300007788\|Ga0099795_10581197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	531	Open in IMG/M
3300009012\|Ga0066710_100207592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2795	Open in IMG/M
3300009148\|Ga0105243_12171085	Not Available	592	Open in IMG/M
3300010373\|Ga0134128_11002170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	923	Open in IMG/M
3300012022\|Ga0120191_10013727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1056	Open in IMG/M
3300012200\|Ga0137382_10146089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1599	Open in IMG/M
3300012208\|Ga0137376_10121481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2229	Open in IMG/M
3300012211\|Ga0137377_10094113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2832	Open in IMG/M
3300012355\|Ga0137369_10660363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	722	Open in IMG/M
3300012359\|Ga0137385_10036011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4437	Open in IMG/M
3300012515\|Ga0157338_1061886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	564	Open in IMG/M
3300012582\|Ga0137358_11032863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	529	Open in IMG/M
3300012885\|Ga0157287_1043812	Not Available	683	Open in IMG/M
3300012895\|Ga0157309_10132397	Not Available	724	Open in IMG/M
3300012912\|Ga0157306_10360345	Not Available	555	Open in IMG/M
3300012944\|Ga0137410_10481188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1012	Open in IMG/M
3300015242\|Ga0137412_10998386	Not Available	599	Open in IMG/M
3300015373\|Ga0132257_100229508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2210	Open in IMG/M
3300016294\|Ga0182041_10927027	Not Available	784	Open in IMG/M
3300018000\|Ga0184604_10058094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1091	Open in IMG/M
3300018031\|Ga0184634_10249737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	813	Open in IMG/M
3300018072\|Ga0184635_10323210	Not Available	599	Open in IMG/M
3300018085\|Ga0187772_10393299	Not Available	964	Open in IMG/M
3300018476\|Ga0190274_13998926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	500	Open in IMG/M
3300019873\|Ga0193700_1022776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1035	Open in IMG/M
3300019875\|Ga0193701_1050883	Not Available	838	Open in IMG/M
3300019885\|Ga0193747_1109406	Not Available	664	Open in IMG/M
3300019996\|Ga0193693_1050376	Not Available	669	Open in IMG/M
3300020022\|Ga0193733_1160896	Not Available	601	Open in IMG/M
3300022694\|Ga0222623_10105158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1098	Open in IMG/M
3300023102\|Ga0247754_1100753	Not Available	698	Open in IMG/M
3300024055\|Ga0247794_10258027	Not Available	577	Open in IMG/M
3300024288\|Ga0179589_10595697	Not Available	518	Open in IMG/M
3300025885\|Ga0207653_10274005	Not Available	650	Open in IMG/M
3300025906\|Ga0207699_10080209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2021	Open in IMG/M
3300026354\|Ga0257180_1071133	Not Available	508	Open in IMG/M
3300027548\|Ga0209523_1056148	Not Available	807	Open in IMG/M
3300027875\|Ga0209283_10042913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2855	Open in IMG/M
3300028380\|Ga0268265_12014142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	584	Open in IMG/M
3300028536\|Ga0137415_10343947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300028719\|Ga0307301_10292657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	533	Open in IMG/M
3300028793\|Ga0307299_10283315	Not Available	622	Open in IMG/M
3300028802\|Ga0307503_10002171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4650	Open in IMG/M
3300028810\|Ga0307294_10378097	Not Available	528	Open in IMG/M
3300028828\|Ga0307312_10091422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1875	Open in IMG/M
3300028828\|Ga0307312_10629736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	710	Open in IMG/M
3300028875\|Ga0307289_10096055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1207	Open in IMG/M
3300028876\|Ga0307286_10217457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF512	695	Open in IMG/M
3300031152\|Ga0307501_10027708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1134	Open in IMG/M
3300031421\|Ga0308194_10238336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	605	Open in IMG/M
3300031545\|Ga0318541_10065179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1899	Open in IMG/M
3300031573\|Ga0310915_10029539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3410	Open in IMG/M
3300031681\|Ga0318572_10026370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2978	Open in IMG/M
3300031716\|Ga0310813_11222969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	692	Open in IMG/M
3300031716\|Ga0310813_12381214	Not Available	502	Open in IMG/M
3300031720\|Ga0307469_11739377	Not Available	602	Open in IMG/M
3300031723\|Ga0318493_10620351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	603	Open in IMG/M
3300031744\|Ga0306918_10087521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2184	Open in IMG/M
3300031748\|Ga0318492_10217097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	982	Open in IMG/M
3300031778\|Ga0318498_10070452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1570	Open in IMG/M
3300031778\|Ga0318498_10468199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	556	Open in IMG/M
3300031780\|Ga0318508_1028679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1400	Open in IMG/M
3300031781\|Ga0318547_10216259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1148	Open in IMG/M
3300031821\|Ga0318567_10073887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1806	Open in IMG/M
3300031893\|Ga0318536_10109515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1389	Open in IMG/M
3300031897\|Ga0318520_10040985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2384	Open in IMG/M
3300031959\|Ga0318530_10023418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2144	Open in IMG/M
3300032051\|Ga0318532_10092706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1062	Open in IMG/M
3300032055\|Ga0318575_10367310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	729	Open in IMG/M
3300032075\|Ga0310890_11523461	Not Available	551	Open in IMG/M
3300032076\|Ga0306924_12029275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	592	Open in IMG/M
3300032174\|Ga0307470_11945039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	501	Open in IMG/M
3300032180\|Ga0307471_103796385	Not Available	534	Open in IMG/M
3300033551\|Ga0247830_10619113	Not Available	857	Open in IMG/M
3300034669\|Ga0314794_125288	Not Available	574	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.78%
Host-Associated	Host-Associated	12.40%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.47%
Plants	Host-Associated → Plants	12.40%
Aquatic	Environmental → Aquatic	3.31%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.96%
Sediment	Environmental → Aquatic → Sediment	3.31%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.55%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	9.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034669	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03310762	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTFKKPTRAGLMALALGLLFALFLSMSAINVSYAEE
LJNas_10258972	3300000546	Quercus Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAA
AP72_2010_repI_A01DRAFT_10605151	3300000579	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEA
AF_2010_repII_A01DRAFT_10064113	3300000580	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAAEA
AF_2010_repII_A01DRAFT_10445201	3300000580	Forest Soil	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAPAAPAADAAAPPACVGGTTP
AP72_2010_repI_A10DRAFT_10505901	3300000651	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAE
AF_2010_repII_A100DRAFT_10418091	3300000655	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSMSAIDHSYAEE
AF_2010_repII_A100DRAFT_10933942	3300000655	Forest Soil	MTFKKPTGAGLVALALGVLFALFLSISVIDRSYAEEAAPAAAPAAAPASPP
AF_2010_repII_A001DRAFT_100336071	3300000793	Forest Soil	MTFKKPTRAGLVSLALAVLFALFLSFSAIDGSYAEEATA
AF_2010_repII_A001DRAFT_100731702	3300000793	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSISVIDRSYAEGAT
AF_2010_repII_A001DRAFT_100789762	3300000793	Forest Soil	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAPAAPAADAAAPPAC
AP72_2010_repI_A100DRAFT_10508391	3300000837	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAITGSYAEEATTAPAAEASASPPACAG
AP72_2010_repI_A001DRAFT_10385913	3300000893	Forest Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAA
JGI10216J12902_1028031892	3300000956	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENCAP
JGI12630J15595_101012631	3300001545	Forest Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENCAPNS
JGI12053J15887_104285352	3300001661	Forest Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPACDAKMLINCT
JGI25614J43888_101320061	3300002906	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAAGAAPPACVGNPDPKLAVLENCTPN
JGI25613J43889_100833041	3300002907	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAAGAAPPACVGNPDPKLA
JGI25617J43924_101573492	3300002914	Grasslands Soil	MTFKNPTRAGLVALALGVLFALFLSMSVIDGSYAQETAATPAA
JGI25617J43924_102206902	3300002914	Grasslands Soil	MTFKKPTSAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAV
JGI25616J43925_101179991	3300002917	Grasslands Soil	MTFKKPTSAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAVLENCTPNS
JGI25405J52794_100695061	3300003911	Tabebuia Heterophylla Rhizosphere	MTFKKPTRAGFVALALGAXLALFLSVSVFDRAYAEQAAPAAPA
Ga0063356_1059808962	3300004463	Arabidopsis Thaliana Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0066388_1022172092	3300005332	Tropical Forest Soil	MPFKKNPTCAGLLALALGVLLALFLSLSVVDHSYAEEAAPAADAAPPACAGGT
Ga0066388_1038434683	3300005332	Tropical Forest Soil	MTFKKPTRAGLVALALGLLFALFLSFSAIDGSYAEEAAATPAA
Ga0070688_1003590391	3300005365	Switchgrass Rhizosphere	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAP
Ga0070659_1000215116	3300005366	Corn Rhizosphere	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAA
Ga0070694_1019108552	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTFSKPSRAGLLGIALGIAFALFLSMSAINGSYAQGAAAVSAQAPPPC
Ga0070663_1020968501	3300005455	Corn Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPA
Ga0066702_106839462	3300005575	Soil	MTFKKPTRAGLVALALGLLFALFLSFSAINGSYAEEAAAAPA
Ga0068864_1004683101	3300005618	Switchgrass Rhizosphere	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAPPAC
Ga0066903_1067338731	3300005764	Tropical Forest Soil	MTFKKPTRAGLVALALGLLFALFLSFSAIDGSYAEEAA
Ga0081455_100493221	3300005937	Tabebuia Heterophylla Rhizosphere	MTFKKPTRAGFVALALGALLALFLSVSVFDRAYAEQAAPAAPAAD
Ga0074062_100346761	3300006606	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPA
Ga0075429_1004503791	3300006880	Populus Rhizosphere	MTFKKPTRAGLVVLALGVLFALLLSMSAIDHSYAEEAAATPAAAGPPACAGNPDPKLAVLEN
Ga0075426_103016361	3300006903	Populus Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEGAAAAPVADSAPPACAGNPDPRFAVLE
Ga0075436_1006832042	3300006914	Populus Rhizosphere	MTFKKPTRAGLVALALAVLFALFLSFSAIDGSYAEEAAAAPAAEA
Ga0099795_105811972	3300007788	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADARAPIPPAWPVPG*
Ga0066710_1002075921	3300009012	Grasslands Soil	MTFKKPTRAGLVALALGALFALFLSMSAIDGSYAEEAAATPAAEA
Ga0105243_121710851	3300009148	Miscanthus Rhizosphere	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADA
Ga0126374_117870121	3300009792	Tropical Forest Soil	MTFKKPTGAGLLALALGALFALFMNLSVIDHSYAEEAAAAPVADSAPLACAGNPD
Ga0126380_108166781	3300010043	Tropical Forest Soil	MTFKKPTGAGLLALALGALFALFMNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAVLENC
Ga0126376_124018082	3300010359	Tropical Forest Soil	MTFKKPTRTGLVALALGALFAVFLSLSVIDHAYAEEAAATPAAEPASPPACVGGT
Ga0134128_110021702	3300010373	Terrestrial Soil	MTFKKPTRAGLLALALGVLFALFLSMSAIDRTYAEEAAA
Ga0120191_100137273	3300012022	Terrestrial	MTFKKPTRAGLVALALGVLFALFLSMSAIDGSYAEEAGA
Ga0137364_102258773	3300012198	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSMSAIDHSYAEEAAATPAAAGPPACAGNPDP
Ga0137382_101460893	3300012200	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAP
Ga0137376_101214811	3300012208	Vadose Zone Soil	MTFKKPTRAGLVALTLGLLFALFLSFSAIDGSYAEE
Ga0137377_100941135	3300012211	Vadose Zone Soil	MTFRKPRRAGLLAFALGIVFALFLSMSAVDCSYAQGAAAAPA
Ga0137369_106603632	3300012355	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSFSAINGSYAEEAAAAPAAEA
Ga0137385_100360116	3300012359	Vadose Zone Soil	MTFKKPTRAGLMALALGVLFALFLSFSAINGSYAEEA
Ga0157338_10618862	3300012515	Arabidopsis Rhizosphere	MTFKKPTRAGLVALALGAFFALFLSMSALDHSYAEEAA
Ga0137358_110328632	3300012582	Vadose Zone Soil	MTFKKPIRAGLVALALGVLFTLFMSMSVIDISYAEEAAAAPPPAAAE
Ga0157287_10438121	3300012885	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEA
Ga0157309_101323971	3300012895	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAAD
Ga0157306_103603451	3300012912	Soil	MTFKKPTRAGLLALALGVLFTLLLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0137410_104811882	3300012944	Vadose Zone Soil	MTFKKPTRAGLVALALGLLLGLFLSISTFSPPSYAEEAAPAATPAPAAE
Ga0137412_109983862	3300015242	Vadose Zone Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAVTPPACD
Ga0132257_1002295081	3300015373	Arabidopsis Rhizosphere	MTFKKPTRAGLVAFALGVLFVLFLSVSVFDRSYAEEAAP
Ga0182041_109270271	3300016294	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEKAAAAPAAA
Ga0184604_100580941	3300018000	Groundwater Sediment	MTFKKTTRAGLLALALGVLFALFLSISAIDRTYAEE
Ga0184634_102497372	3300018031	Groundwater Sediment	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADA
Ga0184635_103232102	3300018072	Groundwater Sediment	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAET
Ga0187772_103932992	3300018085	Tropical Peatland	MTFKKFSRAGLVALALGVLFGLFLSAASVTSSYAQTPDAT
Ga0190274_139989262	3300018476	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAP
Ga0193700_10227761	3300019873	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAATET
Ga0193701_10508831	3300019875	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAP
Ga0193747_11094061	3300019885	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAATETPPA
Ga0193693_10503761	3300019996	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEE
Ga0193733_11608962	3300020022	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAE
Ga0222623_101051583	3300022694	Groundwater Sediment	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAVETPPA
Ga0247754_11007532	3300023102	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPA
Ga0247794_102580271	3300024055	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAA
Ga0179589_105956972	3300024288	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAP
Ga0207653_102740051	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEA
Ga0207699_100802091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTFKKPTRAGLVALALGLLFALFLSFSAINGSYAEEAAAAP
Ga0207676_123688852	3300026095	Switchgrass Rhizosphere	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLACAGNPDPRFAV
Ga0257180_10711332	3300026354	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVA
Ga0209523_10561482	3300027548	Forest Soil	MTFKKPTGAGLLALALGALVALFLSLSVIDHSYAEEAAAAP
Ga0209701_106216292	3300027862	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADAAPPACAGNPDPKLAVLEN
Ga0209465_105430501	3300027874	Tropical Forest Soil	MTFKKPTGAGLLALALGALFVLFLSLSVVDHAYAEAIAAATVADSEPPACAGNPDPRFAV
Ga0209283_100429135	3300027875	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADAAPP
Ga0268265_120141422	3300028380	Switchgrass Rhizosphere	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAA
Ga0137415_103439473	3300028536	Vadose Zone Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHSYAEEAAAAPVADAAPPACA
Ga0307301_102926571	3300028719	Soil	MTFKKPIRAGLVALALGLLLGLFLSISAFNPYYAEEAAPAAAP
Ga0307299_102833151	3300028793	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPA
Ga0307503_100021716	3300028802	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAA
Ga0307294_103780972	3300028810	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPAC
Ga0307312_100914224	3300028828	Soil	MTFKKPIRAGLVALALGLLLGLFLSISAFNPSYAEEAAPAAAPAAEAPP
Ga0307312_106297362	3300028828	Soil	MTFKKPTRAGLVALALGILFALFLSFSAINGSYAEEATAAPAAEAPAGPPACAG
Ga0307289_100960554	3300028875	Soil	MTFKKPTRAGLVALALGVLFALFLSMSVIDRSYAEEAAAPAAAAETPPACDAKTLVNC
Ga0307286_102174571	3300028876	Soil	MTFKKTTRAGLLALALGVLFALFLSMSAIDRTYAEEAAAPAAAADAAPP
Ga0307501_100277083	3300031152	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDRSYAEEAAAPAAA
Ga0308194_102383362	3300031421	Soil	MTFKKPTRAGLVALALGLLLGLFLSISAFNPSYAEEAAPAAAPAA
Ga0318541_100651793	3300031545	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPACAG
Ga0310915_100295395	3300031573	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAE
Ga0318572_100263706	3300031681	Soil	MTFKTPTGAGFLALALGALLVLFLSLSVIDHSYAEEAAAAPA
Ga0310813_112229691	3300031716	Soil	MTFKKPTRAGLVALALAVLFALFLNFSAIDGSYAEE
Ga0310813_123812141	3300031716	Soil	MTFKKPTRAGLFALALGVLFALFLSMSAIDRTYAEEAAA
Ga0307469_117393771	3300031720	Hardwood Forest Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEEAAAAPVADSAPLA
Ga0318493_106203512	3300031723	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPA
Ga0306918_100875211	3300031744	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEAAAAAPV
Ga0318492_102170972	3300031748	Soil	MTFKKPTRAGLLALALGVLFALFLSISVIDRSYAEEAAPAAAPAAEAASPPAC
Ga0318498_100704521	3300031778	Soil	MTFKKPTRAGLVALALGVLFALFLSISVIDRSYAEEAAPAAAPAAEAA
Ga0318498_104681991	3300031778	Soil	MTFKKPTGAGLVALALGALFALFLSLSVIDHAYAEE
Ga0318508_10286791	3300031780	Soil	MTFKKPTRAGLVALALGVLFALFLSLSVIDHAYAEEAAAAPAAAAE
Ga0318547_102162591	3300031781	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAE
Ga0318567_100738871	3300031821	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAAT
Ga0318536_101095153	3300031893	Soil	MTFKKPTRAGLLALALGVLFALFLSMSVIDHSYAEEAAATPAAEAGPPACAGN
Ga0318520_100409855	3300031897	Soil	MTFKTPTGAGFLALALGALLVLFLSLSVIDHSYAEEAAA
Ga0306921_126589792	3300031912	Soil	MTFKKNPTYAGLLALALGVLLALFVSLSVIDHSYAEEAAVAQATDAAPPACAGNPDP
Ga0318530_100234183	3300031959	Soil	MTFKKPTGAGLLALALGALFALFLSLSVIDHAYAEAAAAAPVADAA
Ga0318532_100927061	3300032051	Soil	MTLKKPTRAGLMALALGLLFTLFLTMSAINGSYAEEATTAPAAEASASP
Ga0318575_103673103	3300032055	Soil	MTFKKPTRAGLMALALGVLFALFLSISIIDRSYAEEAAPAAAPAAE
Ga0310890_115234611	3300032075	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAA
Ga0306924_120292752	3300032076	Soil	MTFKKPTGAGLLAPALGALFALFLSLSVIDHAYAEEA
Ga0307470_119450392	3300032174	Hardwood Forest Soil	MTFKKPIRAGLVALALGVLFTLFMSMSVIDISYAEEAAAAPPP
Ga0307471_1037963851	3300032180	Hardwood Forest Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHSYAEGAAAAPT
Ga0310914_114182791	3300033289	Soil	MTFKKPTGAGLLALALGALFALFLNLSVIDHAYAEEAAAAPVADSAPPACAGNPDP
Ga0247830_106191132	3300033551	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAA
Ga0314794_125288_2_148	3300034669	Soil	MTFKKPTRAGLLALALGVLFTLFLSMSAIDRTYAEEAAAPAAAADAAPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072301

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences