Metagenome Family F072249

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072249
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	49 residues
Representative Sequence	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDTLIVV
Number of Associated Samples	70
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.21 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	95.04 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (54.545 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (35.537 % of family members)
Environment Ontology (ENVO)	Unclassified (91.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.562 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.40% Coil/Unstructured: 72.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13884	Peptidase_S74	16.53
PF00386	C1q	3.31
PF02541	Ppx-GppA	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
All Organisms	root	All Organisms	40.50 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	4.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Viruses	superkingdom	All Organisms → Viruses	28.10 %
cellular organisms	root	All Organisms → cellular organisms	12.40 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.57 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	8.26 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.83 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	8.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.79 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.83 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	8.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.96 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	4.13 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.83 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	4.13 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.83 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	4.13 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	0.83 %
uncultured Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	4.13 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.83 %
uncultured Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	0.83 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	0.83 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	0.83 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.83 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.83 %
uncultured Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.83 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	0.83 %
unclassified Flavobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium	0.83 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	0.83 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.83 %
uncultured Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.55 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	8.26 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	4.96 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	4.96 %
Candidatus Pelagibacter sp. TMED275	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	0.83 %
Flavobacterium sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp.	0.83 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	0.83 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	0.83 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.83 %
uncultured Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	0.83 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.83 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.83 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559018\|JCVI_READ_1167407	Not Available	978	Open in IMG/M
3300001460\|JGI24003J15210_10051992	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1362	Open in IMG/M
3300001961\|GOS2240_1021643	Not Available	1522	Open in IMG/M
3300001971\|GOS2215_10102277	All Organisms → Viruses → Predicted Viral	1589	Open in IMG/M
3300001971\|GOS2215_10130640	Not Available	1179	Open in IMG/M
3300002231\|KVRMV2_100028429	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300002242\|KVWGV2_10420088	Not Available	513	Open in IMG/M
3300002482\|JGI25127J35165_1019167	Not Available	1666	Open in IMG/M
3300002482\|JGI25127J35165_1038000	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp.	1078	Open in IMG/M
3300006735\|Ga0098038_1072802	All Organisms → Viruses	1213	Open in IMG/M
3300006737\|Ga0098037_1092827	Not Available	1051	Open in IMG/M
3300006789\|Ga0098054_1084109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1199	Open in IMG/M
3300006790\|Ga0098074_1116183	Not Available	700	Open in IMG/M
3300006929\|Ga0098036_1039767	All Organisms → Viruses	1468	Open in IMG/M
3300006929\|Ga0098036_1072898	All Organisms → Viruses	1059	Open in IMG/M
3300006929\|Ga0098036_1192481	Not Available	620	Open in IMG/M
3300007963\|Ga0110931_1069704	Not Available	1061	Open in IMG/M
3300008050\|Ga0098052_1089507	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1266	Open in IMG/M
3300008050\|Ga0098052_1114146	Not Available	1091	Open in IMG/M
3300008050\|Ga0098052_1204929	Not Available	765	Open in IMG/M
3300008216\|Ga0114898_1219934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	520	Open in IMG/M
3300008219\|Ga0114905_1064420	All Organisms → Viruses	1322	Open in IMG/M
3300008219\|Ga0114905_1072616	Not Available	1229	Open in IMG/M
3300008219\|Ga0114905_1089931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	1075	Open in IMG/M
3300008220\|Ga0114910_1039890	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1546	Open in IMG/M
3300008220\|Ga0114910_1062067	All Organisms → Viruses	1173	Open in IMG/M
3300009413\|Ga0114902_1189737	Not Available	502	Open in IMG/M
3300009414\|Ga0114909_1036082	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1519	Open in IMG/M
3300009418\|Ga0114908_1167686	Not Available	696	Open in IMG/M
3300009418\|Ga0114908_1197258	All Organisms → Viruses	627	Open in IMG/M
3300009481\|Ga0114932_10283239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	995	Open in IMG/M
3300009481\|Ga0114932_10318225	All Organisms → Viruses	931	Open in IMG/M
3300009604\|Ga0114901_1150191	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	700	Open in IMG/M
3300009605\|Ga0114906_1126682	All Organisms → Viruses	897	Open in IMG/M
3300009605\|Ga0114906_1129205	Not Available	886	Open in IMG/M
3300009605\|Ga0114906_1169456	All Organisms → Viruses	744	Open in IMG/M
3300009605\|Ga0114906_1230969	unclassified Hyphomonas → Hyphomonas sp.	609	Open in IMG/M
3300010148\|Ga0098043_1059936	Not Available	1151	Open in IMG/M
3300010148\|Ga0098043_1076156	Not Available	999	Open in IMG/M
3300010148\|Ga0098043_1194788	Not Available	562	Open in IMG/M
3300011013\|Ga0114934_10326732	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	689	Open in IMG/M
3300012919\|Ga0160422_10118238	Not Available	1572	Open in IMG/M
3300012953\|Ga0163179_10438548	Not Available	1068	Open in IMG/M
3300012953\|Ga0163179_11383700	Not Available	629	Open in IMG/M
3300012953\|Ga0163179_11388565	unclassified Hyphomonas → Hyphomonas sp.	628	Open in IMG/M
3300017720\|Ga0181383_1037688	Not Available	1301	Open in IMG/M
3300017738\|Ga0181428_1138760	Not Available	569	Open in IMG/M
3300017739\|Ga0181433_1015023	Not Available	2095	Open in IMG/M
3300017741\|Ga0181421_1049646	Not Available	1117	Open in IMG/M
3300017743\|Ga0181402_1176913	Not Available	534	Open in IMG/M
3300017745\|Ga0181427_1121328	Not Available	638	Open in IMG/M
3300017746\|Ga0181389_1064491	Not Available	1047	Open in IMG/M
3300017757\|Ga0181420_1159927	Not Available	668	Open in IMG/M
3300017758\|Ga0181409_1044218	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1383	Open in IMG/M
3300017764\|Ga0181385_1115406	Not Available	820	Open in IMG/M
3300017764\|Ga0181385_1237888	unclassified Hyphomonas → Hyphomonas sp.	547	Open in IMG/M
3300017767\|Ga0181406_1108960	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	837	Open in IMG/M
3300017768\|Ga0187220_1069019	Not Available	1064	Open in IMG/M
3300017773\|Ga0181386_1018728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	2311	Open in IMG/M
3300017773\|Ga0181386_1099905	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	905	Open in IMG/M
3300017779\|Ga0181395_1206211	Not Available	609	Open in IMG/M
3300017781\|Ga0181423_1136402	Not Available	949	Open in IMG/M
3300020374\|Ga0211477_10088294	Not Available	1156	Open in IMG/M
3300020374\|Ga0211477_10147956	Not Available	839	Open in IMG/M
3300020409\|Ga0211472_10161800	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	895	Open in IMG/M
3300020409\|Ga0211472_10448923	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	518	Open in IMG/M
3300020410\|Ga0211699_10208347	Not Available	748	Open in IMG/M
3300020428\|Ga0211521_10309753	Not Available	701	Open in IMG/M
3300020428\|Ga0211521_10500688	Not Available	521	Open in IMG/M
3300020436\|Ga0211708_10031207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	2031	Open in IMG/M
3300020436\|Ga0211708_10222454	Not Available	761	Open in IMG/M
3300020440\|Ga0211518_10393658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	639	Open in IMG/M
3300022074\|Ga0224906_1006210	All Organisms → Viruses	4961	Open in IMG/M
3300022074\|Ga0224906_1050616	Not Available	1333	Open in IMG/M
3300022074\|Ga0224906_1062510	Not Available	1164	Open in IMG/M
3300024344\|Ga0209992_10135393	Not Available	1081	Open in IMG/M
3300024344\|Ga0209992_10203263	Not Available	840	Open in IMG/M
3300025102\|Ga0208666_1051709	Not Available	1146	Open in IMG/M
3300025102\|Ga0208666_1054572	Not Available	1104	Open in IMG/M
3300025120\|Ga0209535_1071016	All Organisms → Viruses	1367	Open in IMG/M
3300025120\|Ga0209535_1093145	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1102	Open in IMG/M
3300025127\|Ga0209348_1063759	unclassified Hyphomonas → Hyphomonas sp.	1209	Open in IMG/M
3300025127\|Ga0209348_1066191	Not Available	1180	Open in IMG/M
3300025127\|Ga0209348_1069981	Not Available	1138	Open in IMG/M
3300025127\|Ga0209348_1080987	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → environmental samples → uncultured Bacteroidetes bacterium	1036	Open in IMG/M
3300025127\|Ga0209348_1109478	Not Available	849	Open in IMG/M
3300025127\|Ga0209348_1116750	Not Available	814	Open in IMG/M
3300025127\|Ga0209348_1165398	Not Available	641	Open in IMG/M
3300025128\|Ga0208919_1084162	Not Available	1040	Open in IMG/M
3300025131\|Ga0209128_1195471	Not Available	574	Open in IMG/M
3300025132\|Ga0209232_1018385	All Organisms → Viruses	2774	Open in IMG/M
3300025132\|Ga0209232_1080804	Not Available	1125	Open in IMG/M
3300025132\|Ga0209232_1082151	unclassified Hyphomonas → Hyphomonas sp.	1113	Open in IMG/M
3300025132\|Ga0209232_1086933	Not Available	1073	Open in IMG/M
3300025132\|Ga0209232_1092321	Not Available	1033	Open in IMG/M
3300025132\|Ga0209232_1098261	Not Available	991	Open in IMG/M
3300025137\|Ga0209336_10052148	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1266	Open in IMG/M
3300025138\|Ga0209634_1147811	Not Available	963	Open in IMG/M
3300025151\|Ga0209645_1050244	Not Available	1464	Open in IMG/M
3300025151\|Ga0209645_1074506	Not Available	1139	Open in IMG/M
3300025151\|Ga0209645_1210398	unclassified Hyphomonas → Hyphomonas sp.	567	Open in IMG/M
3300025251\|Ga0208182_1030368	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1240	Open in IMG/M
3300025251\|Ga0208182_1032897	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1172	Open in IMG/M
3300025277\|Ga0208180_1095187	Not Available	670	Open in IMG/M
3300025277\|Ga0208180_1129793	All Organisms → Viruses	528	Open in IMG/M
3300025280\|Ga0208449_1146838	Not Available	514	Open in IMG/M
3300025282\|Ga0208030_1059680	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1054	Open in IMG/M
3300025282\|Ga0208030_1067460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED275	967	Open in IMG/M
3300025282\|Ga0208030_1152607	All Organisms → Viruses	540	Open in IMG/M
3300029308\|Ga0135226_1038337	Not Available	512	Open in IMG/M
3300029309\|Ga0183683_1026158	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1091	Open in IMG/M
3300029309\|Ga0183683_1055847	Not Available	537	Open in IMG/M
3300029318\|Ga0185543_1026774	Not Available	1320	Open in IMG/M
3300029448\|Ga0183755_1021609	All Organisms → Viruses → Predicted Viral	2110	Open in IMG/M
3300029448\|Ga0183755_1035161	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1419	Open in IMG/M
3300029448\|Ga0183755_1038867	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300029448\|Ga0183755_1042314	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300029448\|Ga0183755_1048570	All Organisms → Viruses	1085	Open in IMG/M
3300029787\|Ga0183757_1033185	Not Available	1055	Open in IMG/M
3300029792\|Ga0183826_1027684	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	900	Open in IMG/M
3300031773\|Ga0315332_10715982	Not Available	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	58.68%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.53%
Strait	Environmental → Aquatic → Marine → Strait	16.53%
Volcanic	Environmental → Aquatic → Marine → Volcanic	4.13%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.65%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.65%
Harbor	Environmental → Aquatic → Marine → Harbor	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	57.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.53%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	16.53%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.65%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.65%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.83%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	35.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	19.01%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	16.53%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	16.53%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	4.13%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.48%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.65%
Environmental And Host-Associated	Environmental → Aquatic → Marine → Oceanic → Unclassified → Environmental And Host-Associated	0.83%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.83%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.83%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.83%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559018	Marine microbial communities from the Atlantic Ocean, for comparison studies - Ocean6 (GOS4441574)	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001971	Marine microbial communities from the Sargasso Sea - GS000c	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006790	Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025277	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)	Environmental	Open in IMG/M
3300025280	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300029308	Marine harbor viral communities from the Indian Ocean - SRB2	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300029792	Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ocean6-_01769500	2166559018	Environmental And Host-Associated	MSYIGQGLPADTFQGFTTDKFTGDGTANKAFTLTKEPFSEDTILVTIDGVVQEPTETYRSALP
JGI24003J15210_100519923	3300001460	Marine	MSYIGQNLPSNSFIGYTTDTFAGDGSTTAFTMSKAPFSESAVIVVIN
GOS2240_10216431	3300001961	Marine	MPYIGQGLPSNAFTGYDTETFTGDGTANKTFTLAKQPFSENSILVTIDGVVQEATEDFTVSGT
GOS2215_101022774	3300001971	Marine	MSYIGQGLPADVFAGFTIDKFTGTGVASQTLTLSKAPLGETALLVTIDGVVQEPTDDFTV
GOS2215_101306401	3300001971	Marine	MSYIGQGLPADTFQGFTTDKFTGGGTANKAFTLTKEPFSEDTILVTIDGV
KVRMV2_1000284294	3300002231	Marine Sediment	MSYIGQTLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLI
KVWGV2_104200881	3300002242	Marine Sediment	MSYIGQGLPADVFAGFTIDKFTGTGVASQALTLTKAPXGETALLVTIDGVVQEPTDDFTVLGTTVTI
JGI25127J35165_10191671	3300002482	Marine	MAYIGQGLPDNQFIGYDTETFTGDGTANKAFTLSKKPFSENSLLVTIDGVVQEAT
JGI25127J35165_10380001	3300002482	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQK
Ga0098038_10728021	3300006735	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKAPFSENGLIVVINNVIQKPTTN
Ga0098037_10928273	3300006737	Marine	MSYIGQTLPADTFQGFVTDRFTGDGTANKTFTLSKTPF
Ga0098054_10841094	3300006789	Marine	MSYIGQTLPIDRFSGYVTDSFTGDGSTTAFTLTREPHSESALIVVINNVIQ
Ga0098074_11161831	3300006790	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKEPFSEDTLIV
Ga0098036_10397671	3300006929	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKALFSENGLIVVINNV
Ga0098036_10728981	3300006929	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFSEDTLIVVINNVIQKP
Ga0098036_11924811	3300006929	Marine	MSYIGQTLPADSFQGFVTDKFTGDGTANKTFTLSKTPFNESAILVTIDGVVQEATDDFTVSG
Ga0110931_10697043	3300007963	Marine	MSYIGQQLPADVFSGYVTDTFTGDGSATTFTLSKAPFSEDGLIVVVDNVIQQPTTN
Ga0098052_10895071	3300008050	Marine	MSYIGQGLPIDRFAGYVTDSFTGDGSTTAFTLTREPHSESALIVVINNVIQQPTED
Ga0098052_11141463	3300008050	Marine	MSYIGQGLPVDRFAGYVTDAFTGDGSTTAFTLTREPHSESALIVVINNVIQQPTE
Ga0098052_12049293	3300008050	Marine	MSYIGQTLPIDRFSGYVTDSFTGDGSTTAFTLTREPHSESALIVVINNVIQQPTED
Ga0114898_12199342	3300008216	Deep Ocean	MSYIGQTLPADTFQGFVTDKFTGDGTANKTFTLSKTPFNESAILVTIDGVVQE
Ga0114905_10644204	3300008219	Deep Ocean	MSYIGQTLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQGLIVV
Ga0114905_10726161	3300008219	Deep Ocean	MSYIGQTLPADTFQGFVTDKFTGDGTANKTFTLSKTPFNESAILVTIDGVVQEA
Ga0114905_10899314	3300008219	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVV
Ga0114910_10398901	3300008220	Deep Ocean	MSYIGQTLPADTFQGFVTDSFTGDGSATTFTLSKTPFNESALLV
Ga0114910_10620674	3300008220	Deep Ocean	MSYIGQTLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQ
Ga0114902_11897371	3300009413	Deep Ocean	MSYIGQTLPADSFQGFTTDSFAGDGSATTFTLSKTPFNESALLVVINNVVQKPT
Ga0114909_10360821	3300009414	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVVQKPTTN
Ga0114908_11676861	3300009418	Deep Ocean	MSYIGQQLPADVFSGYTTDSFTGDGSATTFTLSRVPF
Ga0114908_11972581	3300009418	Deep Ocean	MSYIGQNLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVINNVIQQPTTNY
Ga0114932_102832393	3300009481	Deep Subsurface	MSYIGQTLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVI
Ga0114932_103182253	3300009481	Deep Subsurface	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKAPFSEDALIVVINNVIQK
Ga0114901_11501913	3300009604	Deep Ocean	MSYIGQTLPADVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVINNVIQQPTTNY
Ga0114906_11266823	3300009605	Deep Ocean	MSYIGQTLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQGLIVVINNVIQQPT
Ga0114906_11292053	3300009605	Deep Ocean	MSYIGQNLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQGLIVVINNVIQQPT
Ga0114906_11694561	3300009605	Deep Ocean	MSYIGQTLPSNSFEGYTTDTFAGDGSATTFTMSKAPFNESAVIVVINNVIQKPTTNF
Ga0114906_12309691	3300009605	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFSEDTL
Ga0098043_10599364	3300010148	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQKPTTNF
Ga0098043_10761562	3300010148	Marine	MSYIGQQLPADVFSGFTTDSFTGDGSATTFTLSKAPFSED
Ga0098043_11947883	3300010148	Marine	MSYIGQGLPADVFSGFTTDAFTGDGSATTFTLSKAPFSENGLIVVINNVIQKPTTNFTVS
Ga0114934_103267322	3300011013	Deep Subsurface	MSYIGQTLPADSFQGFTTDSFTGDGSATTFTLSKTPFNESALL
Ga0160422_101182383	3300012919	Seawater	MSYIGQGLPADTFQGFTTDKFTGDGTANKAFTLTKEPFSEDTILVTIDGVVQEPTDDF
Ga0163179_104385484	3300012953	Seawater	MSYIGQNLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVINNVIQQPT
Ga0163179_113837001	3300012953	Seawater	MSYIGQTLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVINN
Ga0163179_113885651	3300012953	Seawater	MSYIGQNLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVINN
Ga0181383_10376884	3300017720	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDTLIVVINNVIQKPT
Ga0181428_11387602	3300017738	Seawater	MSYIGQQLPADVFGAYTVDTFTGNGSATTFTLSEAPTNENALIVVVDNVIQQPTT
Ga0181433_10150235	3300017739	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDGLIVVINNVIQKPT
Ga0181421_10496461	3300017741	Seawater	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKAPFSEDALIVVI
Ga0181402_11769132	3300017743	Seawater	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKAPFSED
Ga0181427_11213283	3300017745	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKA
Ga0181389_10644913	3300017746	Seawater	MSYIGQTLPADTFQGFTTDSFAGDGSATTFTLSKT
Ga0181420_11599271	3300017757	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDTLIVVIFS
Ga0181409_10442183	3300017758	Seawater	MSYIGQTLPADTFQGFTTDSFAGDGSATTFTLSKTPFNEAALLVVINNVVQKPTT
Ga0181385_11154061	3300017764	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDTLIVV
Ga0181385_12378883	3300017764	Seawater	MSYIGQTLPADSFQGFTTDSFTGDGSATTFTLSKTPFNESALF
Ga0181406_11089602	3300017767	Seawater	MSYIGQTLPADTFQGFTTDSFAGDGSATTFTLSKTPFNESALLVVIN
Ga0187220_10690191	3300017768	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFSEDTLIVVINNVIQKPTTNFTVS
Ga0181386_10187285	3300017773	Seawater	MSYIGQQLPADTFQGFTTDSFTGDGSATTFTLSKAPFSENGLIVVINNVIQ
Ga0181386_10999053	3300017773	Seawater	MSYIGQGLPSDVFSGYTVDKFTGTGVASQALTLTKTPFSETAVLVTIDGVVQEPTDDFTVSG
Ga0181395_12062111	3300017779	Seawater	MSYIGQTLPADTFQGFTTDSFAGDGSATTVTLSKTPFNESA
Ga0181423_11364021	3300017781	Seawater	MSYIGQTLPADTFQGFTTDSFAGDGSATTFTLSKTPFNESALLVVINNVVQKPTTNFI
Ga0211477_100882941	3300020374	Marine	MSYIGQQLPADVFSGYTTDSFTGDGSATTFTLSKAPFSENGLIVVINNVIQKPTTNFTVSGT
Ga0211477_101479561	3300020374	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPF
Ga0211472_101618001	3300020409	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSEE
Ga0211472_104489231	3300020409	Marine	MSYIGQGLPADSFQGFTTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQ
Ga0211699_102083471	3300020410	Marine	MSYIGQGLPDNQFIGYDTETFTGDGTANKAFTLSKKPFSENSLLVTIDGVVQEATEDFTVSGT
Ga0211521_103097534	3300020428	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVVQKP
Ga0211521_105006881	3300020428	Marine	MSYIGQTLPADSFQGFTTDTFTGDGSATTFTLSKAPF
Ga0211708_100312075	3300020436	Marine	MSYIGQGLPADTFQGFTTDKFTGDGTANKAFTLTKEPFSEDTILVTIDGVV
Ga0211708_102224541	3300020436	Marine	MSYIGQQLPADVFSGYVTDTFTGDGSATTFTLSKAPFSADSLIV
Ga0211518_103936582	3300020440	Marine	MSYIGQTLPADTFQGFVTDKFTGDGTANKTFTLSKTPFNESAILVTIDGVVQEATDD
Ga0224906_10062101	3300022074	Seawater	MSYIGQTLPADSFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVVQKPT
Ga0224906_10506161	3300022074	Seawater	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVVQKPT
Ga0224906_10625101	3300022074	Seawater	MSYIGQTLPADSFQGFTTDSFAGDGSATTFTLSKTPFNESALLVVINN
Ga0209992_101353934	3300024344	Deep Subsurface	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLVVINNVVQ
Ga0209992_102032633	3300024344	Deep Subsurface	MSYIGQTLPADTFQGFVTDKFTGDGTANKTFTLSKTPFNESAILVTIDGVVQEATD
Ga0208666_10517091	3300025102	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKAPFSENGLIVVINNVIQKPTT
Ga0208666_10545721	3300025102	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFSEDTLIVVINNVIQKPTTNFTVS
Ga0209535_10710161	3300025120	Marine	MSYIGQNLPSNSFVGYTTDTFAGDGSTTAFTMSKAPFSESAVIVVINNVVQQPTADF
Ga0209535_10931451	3300025120	Marine	MSYIGQNLPSNSFIGYTTDTFAGDGSTTAFTMSKAPFSESAVIVVINNVVQQPTADF
Ga0209348_10637591	3300025127	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQKPTTNFTVSGT
Ga0209348_10661911	3300025127	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSEDTLIV
Ga0209348_10699811	3300025127	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEP
Ga0209348_10809871	3300025127	Marine	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKA
Ga0209348_11094783	3300025127	Marine	MSYIGQQLPIDVFSGYTTDSFTGDGSATTFTLSKAPFSEDALIVVINNVIQ
Ga0209348_11167501	3300025127	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPFS
Ga0209348_11653981	3300025127	Marine	MSYIGQGLPADTFQGFVTDTFAGDGSATTFTLSKEPFSEDTLIVVINNVIQKPT
Ga0208919_10841621	3300025128	Marine	MSYIGQTLPIDRFAGYVTDSFTGDGSTTAFTLTREPHSESALIVVINNVIQQ
Ga0209128_11954711	3300025131	Marine	MSYIGQGLPADVFGAYTVDTFTGDGSATTFTLSAEPTNDSALIV
Ga0209232_10183855	3300025132	Marine	MSYIGQTLPADSFQGFTTDSFTGDGSATTFTLSKTPFNESALLV
Ga0209232_10808041	3300025132	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSE
Ga0209232_10821514	3300025132	Marine	MSYIGQQLPADTFSGFVTDAFTGDGSATTFTLSKAPF
Ga0209232_10869331	3300025132	Marine	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKAPF
Ga0209232_10923211	3300025132	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSENTLIVVINNVI
Ga0209232_10982613	3300025132	Marine	MSYIGQTLPADTFQGFITDSFTGDGSATTFTLSKTPFNESALLVVINNV
Ga0209336_100521481	3300025137	Marine	MSYIGQNLPSNSFIGYTTDTFAGDGSTTAFTMSKA
Ga0209634_11478112	3300025138	Marine	MSYIGQGLPSNSFEGYTTDTFAGDGSATTFTMSKAPF
Ga0209645_10502445	3300025151	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQ
Ga0209645_10745061	3300025151	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSEDTLIVVINNVIQKPT
Ga0209645_12103981	3300025151	Marine	MSYIGQGLPADTFQGFTTDSFTGDGSATTFTLSKEPF
Ga0208182_10303681	3300025251	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFN
Ga0208182_10328972	3300025251	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESAL
Ga0208180_10951871	3300025277	Deep Ocean	MSYIGQTLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQGLI
Ga0208180_11297931	3300025277	Deep Ocean	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKAPFSEDALIVVINNVIQKPVTN
Ga0208449_11468382	3300025280	Deep Ocean	MSYIGQTLPADSFQGFTTDTFTGDGSATTFTLSKAPFSEDSLIVVVDNVIQQ
Ga0208030_10596801	3300025282	Deep Ocean	MSYIGQTLPTDVFGGYATDTFAGDGSATTFTLSQAPFN
Ga0208030_10674601	3300025282	Deep Ocean	MSYIGQTLPADTFQGFTTDSFTGDGSATTFTLSKTPFNESALLV
Ga0208030_11526073	3300025282	Deep Ocean	MSYIGQTLPSNSFEGYTTDTFAGDGSATTFTMSKAPFN
Ga0135226_10383371	3300029308	Marine Harbor	MSYIGQQLPADVFSGFVTDSFTGNGSDTTFTLSKTPFSEDTPIEIVTGK
Ga0183683_10261581	3300029309	Marine	MSYIGQQLPADTFSGFVTDSFTGDGSATTFTLSKAPFSE
Ga0183683_10558471	3300029309	Marine	MSYIGQQLPADVFSGFTTDSFTGDGSATTFTLSKAPFSEDGLIVVINNVIQK
Ga0185543_10267741	3300029318	Marine	MSYIGQGLPADVFSGFTTDAFTGDGSATTFTLSKAPFSEDGLIVVINNV
Ga0183755_10216091	3300029448	Marine	MSYIGQNLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLI
Ga0183755_10351611	3300029448	Marine	MSYIGQNLPTDVFGGYATDTFAGDGSATTFTLSQAPFNEQGL
Ga0183755_10388673	3300029448	Marine	MSYIGQTLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVV
Ga0183755_10423141	3300029448	Marine	MSYIGQTLPTDVFGGYTTDTFAGDGSATTFTLSQAPF
Ga0183755_10485701	3300029448	Marine	MSYIGQQLPADVFSGFVTDSFTGDGSATTFTLSKAPFSEDALIVVIN
Ga0183757_10331854	3300029787	Marine	MSYIGQNLPTDVFGGYTTDTFAGDGSATTFTLSQAPFNEQGLIVVIN
Ga0183826_10276841	3300029792	Marine	MSYIGQGLPADTFQGFVTDSFTGDGSATTFTLSKEPFSEDTLI
Ga0315332_107159821	3300031773	Seawater	MSYIGQQLPADSFQGFTTDSFAGDGSATTFTLSKTPFNESALLVVINNVVQKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072249

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences