Metagenome / Metatranscriptome Family F072225

Basic Information
Family ID	F072225
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	57 residues
Representative Sequence	AAIAETELVPRTFEQIAWALPKELGNYDFLAANRELIAQLATGRIKPAEILEAAK
Number of Associated Samples	104
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	98.35 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (53.719 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.578 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.92% β-sheet: 0.00% Coil/Unstructured: 71.08%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF06940	DUF1287	14.05
PF03992	ABM	5.79
PF00456	Transketolase_N	2.48
PF12796	Ank_2	1.65
PF13602	ADH_zinc_N_2	1.65
PF02687	FtsX	0.83
PF00535	Glycos_transf_2	0.83
PF02627	CMD	0.83
PF13432	TPR_16	0.83
PF01435	Peptidase_M48	0.83
PF03747	ADP_ribosyl_GH	0.83
PF05016	ParE_toxin	0.83
PF02559	CarD_CdnL_TRCF	0.83
PF03069	FmdA_AmdA	0.83
PF09413	DUF2007	0.83
PF12704	MacB_PCD	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG3738	Uncharacterized conserved protein YijF, DUF1287 family	Function unknown [S]	14.05
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	2.48
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	2.48
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.83
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.83
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.72 %
Unclassified	root	N/A	46.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.72 %
Unclassified	root	N/A	46.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.72 %
Unclassified	root	N/A	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.31 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.83 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.28 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000731\|JGI12381J11899_1010279	Not Available	755	Open in IMG/M
3300000955\|JGI1027J12803_101811433	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300001593\|JGI12635J15846_10298332	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300001593\|JGI12635J15846_10762807	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300002245\|JGIcombinedJ26739_100099160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2726	Open in IMG/M
3300005436\|Ga0070713_101222556	Not Available	727	Open in IMG/M
3300005537\|Ga0070730_10919780	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005556\|Ga0066707_10921834	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005557\|Ga0066704_10024490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3608	Open in IMG/M
3300005598\|Ga0066706_10285400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1295	Open in IMG/M
3300005602\|Ga0070762_10380908	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300005610\|Ga0070763_10808884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	554	Open in IMG/M
3300005950\|Ga0066787_10023206	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300006046\|Ga0066652_100190696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1756	Open in IMG/M
3300006755\|Ga0079222_10211719	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300006893\|Ga0073928_10341665	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300007255\|Ga0099791_10138861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300009088\|Ga0099830_10346762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1193	Open in IMG/M
3300009089\|Ga0099828_12015367	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300010043\|Ga0126380_11344024	Not Available	624	Open in IMG/M
3300010043\|Ga0126380_11485471	Not Available	599	Open in IMG/M
3300010046\|Ga0126384_10285583	All Organisms → cellular organisms → Bacteria → Acidobacteria	1350	Open in IMG/M
3300010047\|Ga0126382_11216119	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300010361\|Ga0126378_10220032	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300010398\|Ga0126383_11901343	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300010937\|Ga0137776_1536048	Not Available	577	Open in IMG/M
3300011269\|Ga0137392_10843796	Not Available	756	Open in IMG/M
3300011269\|Ga0137392_11394281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300011270\|Ga0137391_10915188	Not Available	717	Open in IMG/M
3300011270\|Ga0137391_11095169	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300011270\|Ga0137391_11371302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300011271\|Ga0137393_10531307	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300011271\|Ga0137393_11319944	Not Available	610	Open in IMG/M
3300012096\|Ga0137389_11475527	Not Available	576	Open in IMG/M
3300012189\|Ga0137388_11610507	Not Available	585	Open in IMG/M
3300012199\|Ga0137383_10660151	Not Available	764	Open in IMG/M
3300012199\|Ga0137383_10664322	Not Available	762	Open in IMG/M
3300012202\|Ga0137363_11168432	Not Available	655	Open in IMG/M
3300012205\|Ga0137362_10251155	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012207\|Ga0137381_11236295	Not Available	640	Open in IMG/M
3300012356\|Ga0137371_10371009	Not Available	1111	Open in IMG/M
3300012356\|Ga0137371_11232749	Not Available	557	Open in IMG/M
3300012361\|Ga0137360_10399475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1158	Open in IMG/M
3300012362\|Ga0137361_11121826	Not Available	708	Open in IMG/M
3300012683\|Ga0137398_10632921	Not Available	741	Open in IMG/M
3300012685\|Ga0137397_10174238	All Organisms → cellular organisms → Bacteria	1597	Open in IMG/M
3300012685\|Ga0137397_10778661	Not Available	710	Open in IMG/M
3300012918\|Ga0137396_10084030	Not Available	2247	Open in IMG/M
3300012924\|Ga0137413_10883729	Not Available	693	Open in IMG/M
3300012924\|Ga0137413_11760636	Not Available	511	Open in IMG/M
3300012927\|Ga0137416_10997013	Not Available	748	Open in IMG/M
3300012930\|Ga0137407_10982320	Not Available	799	Open in IMG/M
3300012931\|Ga0153915_12520707	Not Available	601	Open in IMG/M
3300012964\|Ga0153916_11370009	Not Available	784	Open in IMG/M
3300014154\|Ga0134075_10173435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	925	Open in IMG/M
3300014156\|Ga0181518_10080197	All Organisms → cellular organisms → Bacteria → Acidobacteria	1863	Open in IMG/M
3300014166\|Ga0134079_10038678	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300015242\|Ga0137412_10798466	Not Available	693	Open in IMG/M
3300015357\|Ga0134072_10126082	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300016422\|Ga0182039_11272061	Not Available	666	Open in IMG/M
3300017947\|Ga0187785_10020158	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300017955\|Ga0187817_10170798	All Organisms → cellular organisms → Bacteria → Acidobacteria	1385	Open in IMG/M
3300017975\|Ga0187782_11695906	Not Available	500	Open in IMG/M
3300018468\|Ga0066662_10378587	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300018468\|Ga0066662_10427749	All Organisms → cellular organisms → Bacteria → Acidobacteria	1176	Open in IMG/M
3300018468\|Ga0066662_10469982	All Organisms → cellular organisms → Bacteria → Acidobacteria	1134	Open in IMG/M
3300019258\|Ga0181504_1236967	Not Available	617	Open in IMG/M
3300019789\|Ga0137408_1375967	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300020170\|Ga0179594_10158771	Not Available	838	Open in IMG/M
3300020170\|Ga0179594_10324729	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300020579\|Ga0210407_11392556	Not Available	521	Open in IMG/M
3300020580\|Ga0210403_10562662	Not Available	923	Open in IMG/M
3300020581\|Ga0210399_10874748	Not Available	730	Open in IMG/M
3300020583\|Ga0210401_10191680	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300021168\|Ga0210406_10951779	Not Available	642	Open in IMG/M
3300021170\|Ga0210400_10000388	All Organisms → cellular organisms → Bacteria → Acidobacteria	50208	Open in IMG/M
3300021170\|Ga0210400_11017029	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300021181\|Ga0210388_11324812	Not Available	607	Open in IMG/M
3300021405\|Ga0210387_10192301	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300021433\|Ga0210391_11324803	Not Available	555	Open in IMG/M
3300021477\|Ga0210398_10208455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1592	Open in IMG/M
3300021559\|Ga0210409_11063095	Not Available	684	Open in IMG/M
3300022533\|Ga0242662_10286320	Not Available	545	Open in IMG/M
3300024222\|Ga0247691_1063401	Not Available	558	Open in IMG/M
3300024323\|Ga0247666_1101830	Not Available	570	Open in IMG/M
3300024330\|Ga0137417_1212657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1667	Open in IMG/M
3300025900\|Ga0207710_10659759	Not Available	548	Open in IMG/M
3300026214\|Ga0209838_1073631	Not Available	517	Open in IMG/M
3300026328\|Ga0209802_1033023	All Organisms → cellular organisms → Bacteria → Proteobacteria	2698	Open in IMG/M
3300026532\|Ga0209160_1352619	Not Available	505	Open in IMG/M
3300026548\|Ga0209161_10166960	All Organisms → cellular organisms → Bacteria → Proteobacteria	1257	Open in IMG/M
3300026847\|Ga0207802_1015660	Not Available	662	Open in IMG/M
3300027090\|Ga0208604_1026001	Not Available	553	Open in IMG/M
3300027172\|Ga0208098_1027895	Not Available	576	Open in IMG/M
3300027439\|Ga0209332_1097528	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300027575\|Ga0209525_1018292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1713	Open in IMG/M
3300027651\|Ga0209217_1210999	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300027655\|Ga0209388_1017973	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300027671\|Ga0209588_1005015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3770	Open in IMG/M
3300027678\|Ga0209011_1026478	Not Available	1862	Open in IMG/M
3300027775\|Ga0209177_10412240	Not Available	544	Open in IMG/M
3300027842\|Ga0209580_10215903	Not Available	952	Open in IMG/M
3300027862\|Ga0209701_10329838	Not Available	869	Open in IMG/M
3300027884\|Ga0209275_10264854	Not Available	946	Open in IMG/M
3300031057\|Ga0170834_110782923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1260	Open in IMG/M
3300031718\|Ga0307474_11365231	Not Available	559	Open in IMG/M
3300031720\|Ga0307469_10140960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1785	Open in IMG/M
3300031740\|Ga0307468_100295322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1173	Open in IMG/M
3300031754\|Ga0307475_10190464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1638	Open in IMG/M
3300031754\|Ga0307475_11008521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	654	Open in IMG/M
3300031823\|Ga0307478_10618794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	906	Open in IMG/M
3300031879\|Ga0306919_10498890	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031910\|Ga0306923_11183260	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300031962\|Ga0307479_11238586	Not Available	709	Open in IMG/M
3300032001\|Ga0306922_10811960	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300032180\|Ga0307471_100021704	All Organisms → cellular organisms → Bacteria	4724	Open in IMG/M
3300032180\|Ga0307471_100391750	All Organisms → cellular organisms → Bacteria → Acidobacteria	1514	Open in IMG/M
3300032180\|Ga0307471_101730619	Not Available	778	Open in IMG/M
3300032783\|Ga0335079_10022035	All Organisms → cellular organisms → Bacteria	7291	Open in IMG/M
3300032893\|Ga0335069_11660933	Not Available	682	Open in IMG/M
3300032895\|Ga0335074_10034000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7129	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.39%
Aquatic	Environmental → Aquatic	5.79%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.39%
Freshwater	Environmental → Aquatic → Freshwater	4.13%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.21%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.13%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000731	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12381J11899_10102791	3300000731	Tropical Forest Soil	HFFAAAIGEAEVTPHTFEQVQWVLPKELGGFDFLAANRQLIAELATGKIKPGEILEETG*
JGI1027J12803_1018114331	3300000955	Soil	FYAAEIAESEITPRAFEQTAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESAGSGIVG*
JGI12635J15846_102983321	3300001593	Forest Soil	EIAEESVRPTCFEQIAWVLPKELGDYDFLDANRALIAQLATGKVKPAELLRDATASD*
JGI12635J15846_107628071	3300001593	Forest Soil	VEIRFYAAEIADENIQPKCFEQITWVLPKELADYDFLDANRVLIAQLATGKVKAAELLRNAKTSE*
JGIcombinedJ26739_1000991602	3300002245	Forest Soil	FYAAEISEEIIQPACFAQIVWVLPRELGDYDFLDANRVLIAQLATGKVKPAELLRNAKGSE*
Ga0070713_1012225561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IAEKEITPRVFEQIAWVLPKELAGYDFLAANRELIAHLATGKIKARELLEE*
Ga0070730_109197802	3300005537	Surface Soil	AQFAEPDISPRVFEQIAWVLPRELSTYDFLVANRELIANLATGRIKPAELLATK*
Ga0066707_109218342	3300005556	Soil	AIANDAVEPVAFEQIAWVLPRELAQYDFLAANKQLIAQLATGRIKPAELLDAL*
Ga0066704_100244905	3300005557	Soil	FFAAEIGEERIVPRAFERIAWALPKELSQYDFLAANATLVAHLATGKIKPREILEAAAPTQETTS*
Ga0066706_102854003	3300005598	Soil	AAAIADGELIPRTFEKIAWALPKELGDYDFLSANAGLAANLATGKIKPGEILEQA*
Ga0070762_103809082	3300005602	Soil	TPKEFEQIAWVLPKELRSYDFLAANAQIIAQLATGRLKPAEILERAPNAPKK*
Ga0070763_108088841	3300005610	Soil	AAIAETELVPRTFEQIAWALPKELGNYDFLAANRELIAQLATGRIKPAEILEAAK*
Ga0066787_100232061	3300005950	Soil	IRFFAAEIAEGAILAKPFEQIAWVLPKELGEYNFLAANSRLVANLATGRIKPREILEGSSQP*
Ga0066652_1001906961	3300006046	Soil	DGELIPRTFEKIAWALPKELGDYDFLSANAGLAANLATGKIKPGEILEQA*
Ga0079222_102117193	3300006755	Agricultural Soil	TESELVPRTFEKIAWVLPKELGGYDFLAANAGLVANLATGRIKPAEVLDNAPP*
Ga0073928_103416652	3300006893	Iron-Sulfur Acid Spring	VRCVEMGRVRHVYAGGTNPVEIRFYAAEIADENIQPKCFEQVAWVLPRELGDYDFLDANRGLIAQLVKAAELLEKAKTSE*
Ga0099791_101388611	3300007255	Vadose Zone Soil	VEIGESEITPRAFEQIAWVLPKELGTYDFLAANAQLVAQLATGRIKPREILENSA*
Ga0099830_103467622	3300009088	Vadose Zone Soil	AASIAESELEPRTFEQIAWVLPKELGTYDFLAANRELIAQLATGRIKPGEILEAAAETG*
Ga0099828_120153671	3300009089	Vadose Zone Soil	EITPRGFEKTVWALPKELGEYDFLAANATLVAHLATGKIKPGEILAEGTAGIQG*
Ga0126380_113440241	3300010043	Tropical Forest Soil	QVPVDEISPNAFEQTAWVLPRELSQYDFLEANKHLLAQLATGRIKPAELLAAF*
Ga0126380_114854711	3300010043	Tropical Forest Soil	IRFFAAAICDEVFNPYSFEQIAWVLPRELGNYDFLAANRTLIAQLATGRIKPGEILQHHG
Ga0126384_102855831	3300010046	Tropical Forest Soil	GIRFFAAAIAEETIKPNSFEQIAWVLPRELGNYDFLAANRALIAQLATGRIKPAEILDGS
Ga0126382_112161193	3300010047	Tropical Forest Soil	FFAAAIAESAVTPHTFEKVEWVLPKELGSYDFLAANRRLIAELATGKIKPGEILEKNG*
Ga0126378_102200323	3300010361	Tropical Forest Soil	ISEGELIPRTFEKIAWVLPKELGEYDFLAANTGLVANLATGKIKPGEILEEA*
Ga0126383_119013432	3300010398	Tropical Forest Soil	AEGELIPRRFEKIAWALPKELGDYDFLAANAGLVANLATGKIKPGEILEEA*
Ga0137776_15360481	3300010937	Sediment	ALENYAIRPITFEQIAWVLPKELGQYDFLTANMQIIARLATGQIKPSEVLEAI*
Ga0137392_108437961	3300011269	Vadose Zone Soil	AAAIVESELEPRTFEQIAWVLPKELGTYDFLAANRELIAQLATGRIKPGEILEAAAETG*
Ga0137392_113942812	3300011269	Vadose Zone Soil	FFAATFVEPEITPTSFEQVAWVLPKDLGQYDFLAANAGLVANLATGRIKPNEALARM*
Ga0137391_109151881	3300011270	Vadose Zone Soil	TPEELEIRFYAAAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPGEILATKV*
Ga0137391_110951692	3300011270	Vadose Zone Soil	EVVPRTFEQIAWVLPKELGTYDFLAANRELIAQLATGRIKPQEILEKSSKTVEGA*
Ga0137391_113713021	3300011270	Vadose Zone Soil	AQYAEPEVSPHVFEQIAWVLPRELSAYDFLLANRELIANLATGRIKPAELLANTG*
Ga0137393_105313074	3300011271	Vadose Zone Soil	EGEARPLCFEQIAWVLPKELGSYDFLAANRELVANLATGRIKPGELLEKPRQRSHE*
Ga0137393_113199441	3300011271	Vadose Zone Soil	ELEIRFYAAAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPGEILATKA*
Ga0137389_114755272	3300012096	Vadose Zone Soil	EILFFAAAIEATEVIPKTFERVAWVLPKELGEYDFLAANAQLIANLATGKIKPAEILEK*
Ga0137388_116105072	3300012189	Vadose Zone Soil	NIIPRAFERISWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESSDNGIVG*
Ga0137383_106601511	3300012199	Vadose Zone Soil	LEIRFYAAAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPREILATKV*
Ga0137383_106643222	3300012199	Vadose Zone Soil	LEIRFYAAAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELVAQLATGRIKPGDILATKV*
Ga0137363_111684322	3300012202	Vadose Zone Soil	FVAKIAEDLVPHTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPREILEAAAQTG*
Ga0137362_102511553	3300012205	Vadose Zone Soil	TPRAFEQIAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESAGSGIVG*
Ga0137381_112362951	3300012207	Vadose Zone Soil	LEIRFYAAAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPGEIPATHV*
Ga0137371_103710091	3300012356	Vadose Zone Soil	AAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELIAQLATGRIKPGEILATHV*
Ga0137371_112327492	3300012356	Vadose Zone Soil	AAIAATEVIPKTFEKIAWVLPKELGDYDFLAANRELVAQLATGRIKPGDILATKV*
Ga0137360_103994751	3300012361	Vadose Zone Soil	PRAFEQIAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESAGSGIVG*
Ga0137361_111218261	3300012362	Vadose Zone Soil	IANDAVEPVAFEQIAWVLPRELAQYDFLAANKQLIAQLATGRIKLAELLDAL*
Ga0137398_106329212	3300012683	Vadose Zone Soil	FAAAIAEPEMLPTCFEQVAWVLPKELGQYDFLDANAELVANLATGRIKPAEILGRF*
Ga0137397_101742381	3300012685	Vadose Zone Soil	IPRAFEQISWVLPKELGAYDFLAANSQLVAQLATGRIKPREILESSAGGIVG*
Ga0137397_107786611	3300012685	Vadose Zone Soil	VEIAESGITPRAFEQIAWVLPKELGAYDFLAANAQLVAQLATGRIKPRDILEAMGSGIVD
Ga0137396_100840301	3300012918	Vadose Zone Soil	IAEGEARPLCFEQIAWVLPKELGEYDFLEANRELVANLATGRIKPAELLERSQTL*
Ga0137413_108837291	3300012924	Vadose Zone Soil	LEIRFYAAEIADPNIQPKCFEQIAWVLPKELGEYDFLEANRPLIAQIATGKVKPAEILRSAKPRE*
Ga0137413_117606362	3300012924	Vadose Zone Soil	FFAVEIAGTEFLPAVFEQVAWVLPRELAEYDFLAANARIVADLATGRIKPRERLEEG*
Ga0137416_109970132	3300012927	Vadose Zone Soil	TAEGEAAPLCFEQIAWVLPRELGAYDFLAANRELIANLATGRIKPGDFLRATDKRI*
Ga0137407_109823203	3300012930	Vadose Zone Soil	AESEITPRAFEQIAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILAEAPDHR*
Ga0153915_125207072	3300012931	Freshwater Wetlands	AVAIAEGEITPRVFEQIAWALPKELGSYDFLAANNALVANLATGRIKPAEILAGKP*
Ga0153916_113700091	3300012964	Freshwater Wetlands	EREIAPRVFEQIAWALPKELGSYDFLAANRALIANLATGRIKPAEILAQEP*
Ga0134075_101734352	3300014154	Grasslands Soil	PRAFERIAWALPKELSQYDFLAANATLVAHLATGKIKPREILEAAAPTQETTS*
Ga0181518_100801972	3300014156	Bog	EIAPTAFERVEWVLPRELGGYDFLAANRELIAHLATGKIKAGEILEKEGL*
Ga0134079_100386781	3300014166	Grasslands Soil	NDAVEPVAFEQIAWVLPRELAQYDFLAANKQLIAQLATGRIKPAELLGAL*
Ga0137412_107984661	3300015242	Vadose Zone Soil	LEIRFYAAEIADPNIQPKCFEQIAWVLPKELGEYDFLNANRPLIAQIATGKVKPAEILRSAKPRE*
Ga0134072_101260823	3300015357	Grasslands Soil	DGELIPRTFEKIAWALPKELGDYDFLSANAGLAANLATGKIKQGEILEQA*
Ga0182039_112720611	3300016422	Soil	DEISPTAFEQTAWVLPRELSQYDFLAANQNLLALLATGRIKPAEVLAAL
Ga0187785_100201583	3300017947	Tropical Peatland	QLREPDVSPRTFERVAWVLPRELGDYDFLAANKQLIALLATGKIKPSELLESI
Ga0187817_101707981	3300017955	Freshwater Sediment	EISEAQLIPRTFEKIAWVLPKELGNYDFLAANAQLVANLATGRIKPGELLAQ
Ga0187782_116959061	3300017975	Tropical Peatland	AAQLGEGGLTPRAFEQVAWVLPKELSQYDFLAANKELIAHLATGKIKPSEVLAEA
Ga0066662_103785871	3300018468	Grasslands Soil	AELAPTCFEQVAWVLPKELGSYDFLAANGVLVANLATGKIKPAELLERAESLSHW
Ga0066662_104277491	3300018468	Grasslands Soil	AAAIAAPDVIPKTFEKIAWVLPKELGDYDFLAANRELVAQLATGRIKPGEILATHV
Ga0066662_104699821	3300018468	Grasslands Soil	DEIAPRGFEKTVWALPKELGAYDFLAANAALVAHLATGKIRPAEILAAGIPRT
Ga0181504_12369671	3300019258	Peatland	NRWKYAFFAVEIADQAIVAKPFEQIAWVLPKELSDYDFLAANARLVANLATGCIKPKEILDIAKNL
Ga0137408_13759671	3300019789	Vadose Zone Soil	FYAVEIGESEITPRAFEQAAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESKSSDSMG
Ga0179594_101587712	3300020170	Vadose Zone Soil	VMESELKPRTFEQIAWVLPKELGDYDFLAANRELIAQLATGRIKPREALEAAAETG
Ga0179594_103247291	3300020170	Vadose Zone Soil	IRFFAAEIADAEIAPTVFEQVAWVLPRELGEYDFLSANARIVADLATGRIKPRERLEGR
Ga0210407_113925562	3300020579	Soil	RESELVPKPFEQILWVLPKELGNFDFLAANAQLVAQLATGRIKPAEILAAAPARKPAG
Ga0210403_105626621	3300020580	Soil	FAASIAESEVVPTAFEAIAWALPKELGSYDFLAANRELIAQLATGRIKPAEILEGT
Ga0210399_108747482	3300020581	Soil	FAVQIAEEVVTPNAFEQVHWVLPKELADYDFLAANAQLVANLATGRIKAAEILERASQEHGNR
Ga0210401_101916801	3300020583	Soil	LEIWFFAAEIVEESVTPRAFEQVHWVLPKELAAYEFLAANAELVANLATGRIKPAEILSG
Ga0210406_109517792	3300021168	Soil	AASIAESEVVPTAFEAIAWALPKELGSYDFLAANRELIAQLATGRIKPAEILEGS
Ga0210400_1000038820	3300021170	Soil	MLEILFYAAAIKEDEVSPKSFERIAWVLPKELGDYDFLAANAQLIANLATGKIKPAEILE
Ga0210400_110170291	3300021170	Soil	PAEEEAAPLSFEQIAWVFPKELGDYDFLAANRELIANLATGRIKPAEILVAAAK
Ga0210388_113248121	3300021181	Soil	IRFFAAKIAADSEIVPVVFEQVAWVLPRELADYDFLAANARLVADLATGRIKPGWDFSEA
Ga0210387_101923013	3300021405	Soil	FAAKIADNKIVPAVFEQVAWVLPRELADYDFLAANARLVADLATGRIKPGWDSPDA
Ga0210391_113248031	3300021433	Soil	EVRFYAAEIADENIQPKCFEQIAWVLPRELGDYDFLDANLVLIAQLATGKVKAAELLRNAKASD
Ga0210398_102084552	3300021477	Soil	FAAQISASELKPVTFEQVAWVLPKELAQYDFLAANRELIAHLATGKIKPAEVLESA
Ga0210409_110630953	3300021559	Soil	EIEIQFYAAEIAEEVVVPKAFEQVHWVLPKDLAAYDFLAANAQLVGDLATGRIKPQERLESQ
Ga0242662_102863201	3300022533	Soil	AESEVVPTAFEAIAWALPKELGSYDFLAANRELIAQLATGRIKPAEILEGT
Ga0247691_10634011	3300024222	Soil	TSLREIEINPKVFEKIAWALPKELGNYDFLAANSQIIAQLATGRLKPGEILESATNPP
Ga0247666_11018302	3300024323	Soil	IQESEILPRTFEQIAWVLPKELGNYDFLAANLQLIAQLATGRIRPAEILERAAKLPSK
Ga0137417_12126572	3300024330	Vadose Zone Soil	RFFAATISETELTPRTFEKIAWVFPKELGNYDFLAANRELIAQLATGRIKPAEILESAQEAGAS
Ga0207710_106597591	3300025900	Switchgrass Rhizosphere	AAKIAETEIAPTAFEQVAWVLPKELSAYDFLAANGRIVADLATGRIKPSEVLQMAGL
Ga0209838_10736312	3300026214	Soil	IRFFAAEIAEGAILAKPFEQIAWVLPKELGEYNFLAANSRLVANLATGRIKPREILEGSSQP
Ga0209802_10330233	3300026328	Soil	ELEILFFAAAIADGELIPRTFEKIAWALPKELGDYDFLSANAGLAANLATGKIKPGEILEQA
Ga0209160_13526192	3300026532	Soil	AAEIGEERIVPRAFERIAWALPKELSQYDFLAANATLVAHLATGKIKPREILEAAAPTQETTS
Ga0209161_101669601	3300026548	Soil	FAAAIADGELIPRTFEKIAWALPKELGDYDFLSANAGLAANLATGKIKPGEILEQA
Ga0207802_10156601	3300026847	Tropical Forest Soil	IAEAEVVPHTFEQVQWVLPKELGSFDFLTADRQLIAELATGKIKPGEILERE
Ga0208604_10260012	3300027090	Forest Soil	ASIQEEEIIPKAFEQIAWVLPKELGNYDFLAANSQLIAQLATGRLKPREILEHRTNPPPK
Ga0208098_10278951	3300027172	Forest Soil	KEGEITPNEFEQIAWALPKELGNYDFLAANSQLIAQLATGRIKPREILEHGTNPPPK
Ga0209332_10975281	3300027439	Forest Soil	EISEDNIEPKCFEQIAWVLPRELGDYDFLDANRVLIAQLATGKVKSAELLRNARASN
Ga0209525_10182921	3300027575	Forest Soil	FAAQYAEPDVSPQVFEQIAWVLPRELSSYDFLAANRKLIANLATGRMKPSELLATI
Ga0209217_12109991	3300027651	Forest Soil	NPVEIRFYAAEISEEIIQPTSFEQIAWVLPRELGDYDFLDANRVLIAQLATGKVKAAELLRDAKGSE
Ga0209388_10179733	3300027655	Vadose Zone Soil	AAAIAESELAPRTFERIVWALPKELGNYDFLAANVGLVANLATGKIKPGEILEES
Ga0209588_10050153	3300027671	Vadose Zone Soil	EIGEPEITPRAFEQIAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILETSA
Ga0209011_10264782	3300027678	Forest Soil	NSANPIEIRFYAAEIVEESIQPKCFERIAWVLPRELGDYDFLDANRVLIAQLATGKVKPAELLRNAKASE
Ga0209177_104122402	3300027775	Agricultural Soil	IHFYAAAIKPGNIAPAVFEQVAWVLPKELGNYDFLAANMPLVAQLATGRLKPSEILDSAANPPGK
Ga0209580_102159031	3300027842	Surface Soil	SVKENEITPKTFEQIAWVLPKELGHYDFLAANSQLIAQLATGRLKPNELLQIAARLPAK
Ga0209701_103298381	3300027862	Vadose Zone Soil	LEPRTFEQIAWVLPKELGTYDFLAANRELIAQLATGRIKPGEILEAAAETG
Ga0209275_102648541	3300027884	Soil	TPKEFEQIAWVLPKELRSYDFLAANAQIIAQLATGRLKPAEILERAPNAPKK
Ga0170834_1107829232	3300031057	Forest Soil	DVQPKCFEQIVWVLPKELGDYDFLDANRALIAQLATGKVKAAELLRNAKDSE
Ga0307474_113652311	3300031718	Hardwood Forest Soil	ELESTEVRPTAFEQMAWVAPRELSEYDFLAANSELVANLATGRIKPSEILSATR
Ga0307469_101409601	3300031720	Hardwood Forest Soil	AAQYNEPDVSPRVFEQIAWVLPRELSTYDFLMANRELIANLATGRIKPAELLASVG
Ga0307468_1002953221	3300031740	Hardwood Forest Soil	PRAFEQTAWVLPKELGAYDFLAANAQLVAQLATGRIKPREILESAGSGIVG
Ga0307475_101904642	3300031754	Hardwood Forest Soil	MLEILFYAAAIKEDEVSPKSFERIAWVLPKELGDYDFLAANAQLIANLATGKIKPSEILE
Ga0307475_110085213	3300031754	Hardwood Forest Soil	TLAEGEASPLCFEQIAWVLPKELGDYDFLAANRELIANLATGRIKPGEILERSL
Ga0307478_106187941	3300031823	Hardwood Forest Soil	ALAEEEASPLCFEQIAWVLPKELGEYDFLAANRELIANLATGRIKPGEILERSL
Ga0306919_104988901	3300031879	Soil	ETELQPGAFERVAWVLPRELGNYDFLAANGGLIAELATGRIKPAELLSALPDAGPESP
Ga0306923_111832602	3300031910	Soil	EADVSPRTFEQIAWVLPRELGDYDFLAANRKLIALLATGKIRPNELLAAE
Ga0307479_112385861	3300031962	Hardwood Forest Soil	FAAQYTEPDVSPHTFEQIAWVLPRELSSYDFLLANRELIANLATGRIKPSELLANSA
Ga0306922_108119602	3300032001	Soil	FFAARIAETEVLPQTFEQVAWVLPKELGHYDFLAANRELIAHLATGKIKPAEALA
Ga0307471_1000217044	3300032180	Hardwood Forest Soil	YAEPDISPHVFEQIAWVLPRELSSYDFLLANRELIANLATGRIKPAELLATI
Ga0307471_1003917502	3300032180	Hardwood Forest Soil	AAEIAERDVTSKVFEQVHWVLPRELGDYDFLPANAQLVANLATGRIKPAEILEG
Ga0307471_1017306192	3300032180	Hardwood Forest Soil	AEIADENIEPKCFEQIAWVLPRELGDYDFLDANRMLIAQLATGKVKAAELLRNAKDSE
Ga0335079_100220357	3300032783	Soil	AELAPQTFEQTAWVLPKELGAYDFLAANAELVANLATGRIKPAEILADAHPESPA
Ga0335069_116609331	3300032893	Soil	IADTEVVPHMFEKVEWVLPKELGGYDFLAANRRLIAELATGKIKPAEVLEGG
Ga0335074_100340007	3300032895	Soil	ASIKESKIAPKTFEQIAWVLPKELSDYDFLAANSQLIAQLATGRLKPNEILEASQSQTKI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign