Metagenome Family F072218

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F072218
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	74 residues
Representative Sequence	HLKLASDAILKTARHLAVLSNGDSSNEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS
Number of Associated Samples	110
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.79 %
% of genes near scaffold ends (potentially truncated)	95.87 %
% of genes from short scaffolds (< 2000 bps)	97.52 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.703 % of family members)
Environment Ontology (ENVO)	Unclassified (28.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.83% β-sheet: 0.00% Coil/Unstructured: 47.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13561	adh_short_C2	24.79
PF00106	adh_short	4.13
PF02452	PemK_toxin	4.13
PF01370	Epimerase	4.13
PF12681	Glyoxalase_2	4.13
PF01035	DNA_binding_1	2.48
PF00891	Methyltransf_2	1.65
PF00582	Usp	1.65
PF04075	F420H2_quin_red	1.65
PF00589	Phage_integrase	1.65
PF09594	GT87	0.83
PF12900	Pyridox_ox_2	0.83
PF00043	GST_C	0.83
PF10604	Polyketide_cyc2	0.83
PF00903	Glyoxalase	0.83
PF01243	Putative_PNPOx	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	4.13
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	2.48
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	2.48
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.83
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.56 %
Unclassified	root	N/A	7.44 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.71 %
Unclassified	root	N/A	7.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.48 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	30.58 %
Unclassified	root	N/A	7.44 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	30.58 %
Unclassified	root	N/A	7.44 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.58 %
Unclassified	root	N/A	7.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.58 %
Unclassified	root	N/A	7.44 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10110457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300003994\|Ga0055435_10144777	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300004643\|Ga0062591_100233490	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300004808\|Ga0062381_10222699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	664	Open in IMG/M
3300005176\|Ga0066679_10559824	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005178\|Ga0066688_10246026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1144	Open in IMG/M
3300005332\|Ga0066388_102805577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	890	Open in IMG/M
3300005332\|Ga0066388_107939616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	531	Open in IMG/M
3300005353\|Ga0070669_101881205	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005354\|Ga0070675_100407906	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300005364\|Ga0070673_101413953	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005367\|Ga0070667_100260757	All Organisms → cellular organisms → Bacteria	1552	Open in IMG/M
3300005446\|Ga0066686_10177242	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300005447\|Ga0066689_11007625	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	512	Open in IMG/M
3300005455\|Ga0070663_101300622	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005468\|Ga0070707_100411885	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005552\|Ga0066701_10822955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300005553\|Ga0066695_10039182	All Organisms → cellular organisms → Bacteria	2780	Open in IMG/M
3300005554\|Ga0066661_10440311	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005558\|Ga0066698_10889922	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300005560\|Ga0066670_10899333	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300005564\|Ga0070664_101775098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300005577\|Ga0068857_100414689	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1255	Open in IMG/M
3300005586\|Ga0066691_10239618	All Organisms → cellular organisms → Bacteria → Proteobacteria	1063	Open in IMG/M
3300005598\|Ga0066706_10193004	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005614\|Ga0068856_102679696	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300005713\|Ga0066905_100694390	Not Available	872	Open in IMG/M
3300005713\|Ga0066905_100707110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	865	Open in IMG/M
3300006032\|Ga0066696_10337184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300006034\|Ga0066656_10342212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	966	Open in IMG/M
3300006057\|Ga0075026_100596302	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006755\|Ga0079222_10724006	Not Available	793	Open in IMG/M
3300006796\|Ga0066665_10296403	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300006796\|Ga0066665_10784658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	752	Open in IMG/M
3300006797\|Ga0066659_10751715	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300006845\|Ga0075421_102524598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300006852\|Ga0075433_11755540	Not Available	534	Open in IMG/M
3300006854\|Ga0075425_101362130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300006865\|Ga0073934_10434895	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300006871\|Ga0075434_102148731	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006904\|Ga0075424_101319648	Not Available	767	Open in IMG/M
3300006914\|Ga0075436_100554501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	844	Open in IMG/M
3300007076\|Ga0075435_100802636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300007076\|Ga0075435_101397198	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300007258\|Ga0099793_10417634	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300009012\|Ga0066710_102479127	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300009111\|Ga0115026_10878947	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009137\|Ga0066709_102831705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300009156\|Ga0111538_12087322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	712	Open in IMG/M
3300009176\|Ga0105242_12624221	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300010043\|Ga0126380_10451217	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300010301\|Ga0134070_10343037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300010329\|Ga0134111_10527549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300010333\|Ga0134080_10260612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300010336\|Ga0134071_10249983	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300010359\|Ga0126376_12980428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300010360\|Ga0126372_11935995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	635	Open in IMG/M
3300010398\|Ga0126383_10405558	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300010399\|Ga0134127_10175761	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300010399\|Ga0134127_10919753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	931	Open in IMG/M
3300010403\|Ga0134123_11122452	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010938\|Ga0137716_10434609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300012200\|Ga0137382_11290174	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012203\|Ga0137399_11565288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300012203\|Ga0137399_11697826	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300012208\|Ga0137376_10414227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300012927\|Ga0137416_10303916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1323	Open in IMG/M
3300012948\|Ga0126375_10647625	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300012948\|Ga0126375_11694439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	548	Open in IMG/M
3300012971\|Ga0126369_12287618	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012977\|Ga0134087_10094908	Not Available	1242	Open in IMG/M
3300014150\|Ga0134081_10402348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300014304\|Ga0075340_1084895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	613	Open in IMG/M
3300015359\|Ga0134085_10194702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300015371\|Ga0132258_10661418	All Organisms → cellular organisms → Bacteria → Proteobacteria	2628	Open in IMG/M
3300015372\|Ga0132256_100534680	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300016294\|Ga0182041_11299100	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300016371\|Ga0182034_11226445	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300017659\|Ga0134083_10242579	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300018431\|Ga0066655_10176152	Not Available	1298	Open in IMG/M
3300018433\|Ga0066667_10264457	Not Available	1313	Open in IMG/M
3300018433\|Ga0066667_10538598	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300018468\|Ga0066662_12170635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	582	Open in IMG/M
3300025310\|Ga0209172_10327295	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300025906\|Ga0207699_11342971	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300025922\|Ga0207646_10353486	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300025922\|Ga0207646_11610235	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025930\|Ga0207701_10685481	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300025931\|Ga0207644_10391368	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300025933\|Ga0207706_10138354	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300025960\|Ga0207651_11265958	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300025961\|Ga0207712_11178062	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025972\|Ga0207668_12021261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300026316\|Ga0209155_1145606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300026532\|Ga0209160_1276052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	570	Open in IMG/M
3300026548\|Ga0209161_10171181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1236	Open in IMG/M
3300026550\|Ga0209474_10573233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300027909\|Ga0209382_12000732	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300028379\|Ga0268266_11160651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300028536\|Ga0137415_10390327	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300031544\|Ga0318534_10252947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1016	Open in IMG/M
3300031719\|Ga0306917_11064900	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031719\|Ga0306917_11273056	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300031740\|Ga0307468_101178718	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300031781\|Ga0318547_10361052	Not Available	888	Open in IMG/M
3300031832\|Ga0318499_10227120	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031846\|Ga0318512_10531983	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300031859\|Ga0318527_10251864	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031894\|Ga0318522_10180118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300031901\|Ga0307406_12121258	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031941\|Ga0310912_10383892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1093	Open in IMG/M
3300031949\|Ga0214473_11971813	Not Available	571	Open in IMG/M
3300032002\|Ga0307416_100651543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1138	Open in IMG/M
3300032003\|Ga0310897_10189720	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300032041\|Ga0318549_10375362	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300032068\|Ga0318553_10307057	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300032782\|Ga0335082_10839769	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300032829\|Ga0335070_10776051	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300032829\|Ga0335070_12029297	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300032893\|Ga0335069_10790080	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300033413\|Ga0316603_12318360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.03%
Host-Associated	Host-Associated	23.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.25%
Plants	Host-Associated → Plants	23.97%
Aquatic	Environmental → Aquatic	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.49%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.92%
Loam	Environmental → Terrestrial → Soil → Loam	7.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	1.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.31%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	1.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.65%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.83%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_101104571	3300002908	Grasslands Soil	ETFTELAVHLKLASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILSALLEANREEESPSLMVPDKQSEPLLS*
Ga0055435_101447772	3300003994	Natural And Restored Wetlands	DAVLATARHLAVLSNGDNGPDEHWAGTLDSLMNMNTEITVMERILRALMEANREEELQASPTAKKSEPLPS*
Ga0062591_1002334901	3300004643	Soil	ETFTELAVHLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS*
Ga0062381_102226992	3300004808	Wetland Sediment	HLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAATPPLSAKKSEPLPS*
Ga0066679_105598241	3300005176	Soil	DAVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSIAVPDKKSEPLPS*
Ga0066688_102460262	3300005178	Soil	FTELAVHLKLASDAILKTARHLTVLSNGDSSNEEQWAGTHDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKLSEPLLS*
Ga0066388_1028055772	3300005332	Tropical Forest Soil	FTELAVHLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAGTPAISPKKSEPLPS*
Ga0066388_1079396162	3300005332	Tropical Forest Soil	QTTPDEHWAGTLDGLMNMNTQITVMERILRALMEANREEETPAAAPAKKSEPLPS*
Ga0070669_1018812052	3300005353	Switchgrass Rhizosphere	HLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS*
Ga0070675_1004079061	3300005354	Miscanthus Rhizosphere	SNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS*
Ga0070673_1014139532	3300005364	Switchgrass Rhizosphere	HLKLASDAILQTARHLAVLSNENSGPEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMAPDKKSEPLPS*
Ga0070667_1002607571	3300005367	Switchgrass Rhizosphere	TFTELAVHLKLASDAVLATARHLAVLSNGDNGPDEHWAGTLDSLMNMNTEITVMERILRALMEANREEELQANPTAKKSEPLPS*
Ga0066686_101772421	3300005446	Soil	VLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0066689_110076251	3300005447	Soil	ARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILHALMEANREEESPSLMVPDKQSEPLLS*
Ga0070663_1013006222	3300005455	Corn Rhizosphere	LASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMESILRALMEANREEDMLTPSPSGKKTEPVPS*
Ga0070707_1004118852	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS*
Ga0066701_108229552	3300005552	Soil	FTELAVHLKLASDAILKTARHLTVLSNGDSSNEEQWAGTHDSLTAMNTEITVMEKILHALLEANREEESPSLMVPDKVSEPLLS*
Ga0066695_100391824	3300005553	Soil	DAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS*
Ga0066661_104403112	3300005554	Soil	HLKLASDAVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSIAVPDKKSEPLPS*
Ga0066698_108899222	3300005558	Soil	AVHLKLASDAVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS*
Ga0066670_108993331	3300005560	Soil	MIIDRVTFTELAVHLKLASDAILKTARHLAVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0070664_1017750981	3300005564	Corn Rhizosphere	MIIDHETFTELAVHLKLASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMERILRALMEANREEDLLTPSPSGKKTEPVPS*
Ga0068857_1004146892	3300005577	Corn Rhizosphere	RETFTELAVHLKLASDAILKTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS*
Ga0066691_102396181	3300005586	Soil	TARHLAVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS*
Ga0066706_101930041	3300005598	Soil	KLASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEDSPSLMVPDKQSEPLPS*
Ga0068856_1026796961	3300005614	Corn Rhizosphere	MIIARETFTELAVHLKLASDAILKTARHLAVLSNGDSSNEEQWAGTLDSLMAMNSEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0066905_1006943902	3300005713	Tropical Forest Soil	HLAVLSNGNSAPDEHWAGTLDSLMSMNSEITVMERILRALMEANQEEDSGTVATSAKKSEPLPS*
Ga0066905_1007071101	3300005713	Tropical Forest Soil	HLAVLSNGNSAPDEHWAGTLDSLMSMNSEITVMERILRALMEANQEEDSGTVPTSAKKSEPLPS*
Ga0066696_103371841	3300006032	Soil	ELAVHLKLASDAILKTARHLAVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDASQIASPDKKSEPLPS*
Ga0066656_103422121	3300006034	Soil	TFTELAVHLKLASDAILKTARHLAVLSNADSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0075026_1005963022	3300006057	Watersheds	SNGNSGPEEHWAGTLDSLMSMNTEITVMERILRALMDANREEETAVPSATDAKKSEKPLPS*
Ga0079222_107240062	3300006755	Agricultural Soil	ETFTELAVHLKLASDAILKTARHLAVLSNGDSSNEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0066665_102964031	3300006796	Soil	AVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0066665_107846581	3300006796	Soil	KLASDAILKTARHLAVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS*
Ga0066659_107517151	3300006797	Soil	HLKLASDAVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS*
Ga0075421_1025245981	3300006845	Populus Rhizosphere	DAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVSAKKSEPLPS*
Ga0075433_117555401	3300006852	Populus Rhizosphere	AILQTARHLAVLSNENSGPEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMAPDKKSEPLPS*
Ga0075425_1013621302	3300006854	Populus Rhizosphere	SNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMDANREEDSSQIASPDKKSEPLPS*
Ga0073934_104348951	3300006865	Hot Spring Sediment	LAVHLKLASDAVLTTARHLAVLSNGNNGPEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEAAAGAPVASKKGEPLPS*
Ga0075434_1021487311	3300006871	Populus Rhizosphere	VLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMDANREEDSSQIASPDKKSEPLPS*
Ga0075424_1013196481	3300006904	Populus Rhizosphere	HLKLASDAILKTARHLAVLSNGDSSNEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0075436_1005545012	3300006914	Populus Rhizosphere	RETFTELAVHLKLASDAILKTARHLAVLSNGDSQNEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0075435_1008026361	3300007076	Populus Rhizosphere	AVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMDANREEDSSQIASPDKKSEPLPS*
Ga0075435_1013971981	3300007076	Populus Rhizosphere	AVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDSSQIASPDKKSEPLPS*
Ga0099793_104176342	3300007258	Vadose Zone Soil	SDAILKTARHLAVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDASQIASPDKKSEPLPS*
Ga0066710_1024791271	3300009012	Grasslands Soil	TARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS
Ga0115026_108789471	3300009111	Wetland	AVLTTARHLAVLSNGNTGPEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEAGAIAVGAKKSEPMPS*
Ga0066709_1028317051	3300009137	Grasslands Soil	LKLASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEDSPSLMVPDKQSEPLPS*
Ga0111538_120873222	3300009156	Populus Rhizosphere	ETFTELAVHLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVSAKKSEPLPS*
Ga0105242_126242211	3300009176	Miscanthus Rhizosphere	HLKLPSDAILKTARHLAELSNGEPESEEHWAGTLDSLMSMNSEITVMEKILRALMEANREEEGTPLSVPDKKSDPLPS*
Ga0126380_104512172	3300010043	Tropical Forest Soil	AADAVLTTAKHLAVLSSGNSAPDEHWAGTLDSLMSMNSEITVMERILRALMEANQEEESGSVPTSPKKSEPLPS*
Ga0134070_103430372	3300010301	Grasslands Soil	SDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKLSEPLLS*
Ga0134111_105275492	3300010329	Grasslands Soil	VHLKLASDAILKTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS*
Ga0134080_102606122	3300010333	Grasslands Soil	LAVHLKLASDAILKTARHLAVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS*
Ga0134071_102499832	3300010336	Grasslands Soil	SDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS*
Ga0126376_129804281	3300010359	Tropical Forest Soil	DMIIDGETFTELAVDLKLASDAILKTARHLAVLSNGDNSNEEQWAGTLDSLKAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0126372_119359951	3300010360	Tropical Forest Soil	KHLAVLSNGNAAPDEHWAGTLDGLMNMNAEITLMERILRALMEANRAEERVAVAPPAKKSEPLPS*
Ga0126383_104055581	3300010398	Tropical Forest Soil	DNGPDEHWAGTLDSLMNMNTEITVMERILRALMDANQEEETGTAPTAAKKSEPLPS*
Ga0134127_101757611	3300010399	Terrestrial Soil	ELAVHLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVSAKKSEPLPS*
Ga0134127_109197531	3300010399	Terrestrial Soil	VHLKLASDAVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVSAKKSEPLPS*
Ga0134123_111224521	3300010403	Terrestrial Soil	TCTALAVHLKLASDAILQTARHLAVLSNENSGPEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMAPDKKSEPLPS*
Ga0137716_104346091	3300010938	Hot Spring Fe-Si Sediment	HLKLASDAILKTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS*
Ga0137382_112901742	3300012200	Vadose Zone Soil	AVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSIAVPDKKSEPLPS*
Ga0137399_115652882	3300012203	Vadose Zone Soil	ASDAILKTARHLAVLSNDSESEEHWAGTLDNLMSMNTEITLMEKILRALMDANREEETTPASAADKKSEPLPS*
Ga0137399_116978261	3300012203	Vadose Zone Soil	FTELAVHLKMASDAILKTARHLAVLSNGDASNEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0137376_104142272	3300012208	Vadose Zone Soil	HLKIASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS*
Ga0137416_103039162	3300012927	Vadose Zone Soil	FTELAVHLKLASDAILKTARHLAVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDASQIASPDKKSEPLPS*
Ga0126375_106476251	3300012948	Tropical Forest Soil	TFTELAVHLKLASDAILKTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMEKILRALMEANREEESSPLIPDKKSEPLPS*
Ga0126375_116944391	3300012948	Tropical Forest Soil	MIIDCETFTELAVHLKLASDAVLTTAKHLAVLSNGNAAPDEHWAGTLDGLMNMNTQITLMERILRALMEANRQEEIVAVAPPAKKSEPLPS*
Ga0126369_122876182	3300012971	Tropical Forest Soil	VLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVSAKKSEPLPS*
Ga0134087_100949081	3300012977	Grasslands Soil	NGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0134081_104023481	3300014150	Grasslands Soil	KLASDAILKTARHLAVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS*
Ga0075340_10848951	3300014304	Natural And Restored Wetlands	MMIIYRETFTELAVHLKLASDAVLATARHLAVLSNGDNGPDEHWAGTLDSLMTMNTEITVMERILRALMEANREEELQTSPATKKSEPLPS*
Ga0134085_101947022	3300015359	Grasslands Soil	TFTELAVHLKLASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLLS*
Ga0132258_106614183	3300015371	Arabidopsis Rhizosphere	MIIDHETFTELAVHLKLASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMESILRALMEANREEDLLTPSPSGKKTEPVPS*
Ga0132256_1005346803	3300015372	Arabidopsis Rhizosphere	MIIDHETFTEIAVHLKLASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMESIVRALMEDNREEDRLTPSPSGKK
Ga0182041_112991002	3300016294	Soil	VLTTAKHLAVLSNGNTAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLPS
Ga0182034_112264451	3300016371	Soil	LASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLPS
Ga0134083_102425791	3300017659	Grasslands Soil	AVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKQSEPLLS
Ga0066655_101761521	3300018431	Grasslands Soil	AVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS
Ga0066667_102644571	3300018433	Grasslands Soil	TARHLAVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS
Ga0066667_105385981	3300018433	Grasslands Soil	LKLASDAILKTARHLTVLSNGDSSNEEQWAGTLDSLTAMNTEITVMEKILRALMEANREEDSPSLMVPDKQSEPLPS
Ga0066662_121706351	3300018468	Grasslands Soil	TARHLAVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKTEPLPS
Ga0209172_103272952	3300025310	Hot Spring Sediment	LAVHLKLASDAVLTTARHLAVLSNGNNGPEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEAAAGAPVASKKGEPLPS
Ga0207699_113429712	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LATAKHLAVLSNGNTAPDENWAGTLDGLMNMNSEITVMERILRALMEANREEEQVAVGPPAKKSEPLPS
Ga0207646_103534862	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	KTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS
Ga0207646_116102351	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	HLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSTAVPDKKSEPLPS
Ga0207701_106854811	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MIIDHETFTELAVHLKLASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMESILRALMEANREEDL
Ga0207644_103913683	3300025931	Switchgrass Rhizosphere	AVLTTARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS
Ga0207706_101383544	3300025933	Corn Rhizosphere	HLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS
Ga0207651_112659581	3300025960	Switchgrass Rhizosphere	AVHLKLASDAILQTARHLAVLSNENSGPEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMAPDKKSEPLPS
Ga0207712_111780621	3300025961	Switchgrass Rhizosphere	SNGDNGPDEHWAGTLDSLMNMNTEITVMERILRALMEANREEELQASPTAKKSEPLPS
Ga0207668_120212611	3300025972	Switchgrass Rhizosphere	ETFTELAVHLKLASDAILATAKHLAVLSKDNAAPDEHWAGTLDGLMNMNTEITVMESILRALMEANREEDMLTPSPSGKKTEPVPS
Ga0209155_11456062	3300026316	Soil	ELAVHLKLASDAILKTARHLTVLSNGDSSNEAQWAGTHDSLTAMNTEITVMEKILRALMEANREEESPSLMVPDKLSEPLLS
Ga0209160_12760521	3300026532	Soil	ARHLAVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDASQIASPDKKSEPLPS
Ga0209161_101711812	3300026548	Soil	AVHLKLASDAVLTTARHLAVLSNGDAGPDEHWAGTLDSLMSMNTEITVMERILRALMEANREEESSLSVPDKKSEPLPS
Ga0209474_105732331	3300026550	Soil	ARHLAVLSNGDSSNEEQWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMVPDKKSEPLPS
Ga0209382_120007322	3300027909	Populus Rhizosphere	SNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEGLPVSVPDKKSEPLPS
Ga0268266_111606512	3300028379	Switchgrass Rhizosphere	LSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS
Ga0137415_103903271	3300028536	Vadose Zone Soil	FTELAVHLKLASDAILKTARHLAVLSNGEPESEEHWAGTLDSLMCMNSEITVMEKILRALMEANREEDASQIASPDKKSEPLPS
Ga0318534_102529472	3300031544	Soil	RETFTELAVHLKLASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEETGAAPTAAKKSEPLPS
Ga0306917_110649001	3300031719	Soil	KHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLPS
Ga0306917_112730561	3300031719	Soil	LSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEETGAVQTAAKKSEPLPS
Ga0307468_1011787181	3300031740	Hardwood Forest Soil	VLSNGEPESEEHWAGTLDSLMSMNSEITVMEKILRALMEANREEELQASPTAKKSEPLPS
Ga0318547_103610521	3300031781	Soil	KHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEETGAAPTAAKKSEPLPS
Ga0318499_102271202	3300031832	Soil	TELAVHLKLASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMSMNTEITVMERILRALMEANQEEETGAVQTAAKKSEPLPS
Ga0318512_105319831	3300031846	Soil	DAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEETGAAPTAAKKSEPLPS
Ga0318527_102518642	3300031859	Soil	AVHLKLASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMSMNTEITVMERILRALMEANQEEETGAAPIAAKKSEPLPS
Ga0318522_101801182	3300031894	Soil	TFTELAVHLKLASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLPS
Ga0307406_121212582	3300031901	Rhizosphere	HLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS
Ga0310912_103838921	3300031941	Soil	VLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLP
Ga0214473_119718131	3300031949	Soil	LASDAILQTARHLAVLSNENSGPEEHWAGTLDSLMAMNTEITVMEKILRALMEANREEESPSLMAPDKKSEPLPS
Ga0307416_1006515432	3300032002	Rhizosphere	ARHLAVLSNGNNGPEENWAGTLDSLMAMNSEITVMERILRALMEANREEEAASPAVAAKKSEPLPS
Ga0310897_101897201	3300032003	Soil	ELAVHLKLASDAILKTARHLAVLSNGDSGSEEHWAGTLDSLMSMNTEITVMERILRALMEANREEDMLTPSPSGKKTEPVPS
Ga0318549_103753621	3300032041	Soil	AVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEESGAVPTAAKKSEPLPS
Ga0318553_103070571	3300032068	Soil	HLKLASDAVLTTAKHLAVLSNGNSAPDEHWAGTLDSLMNMNTEITVMERILRALMEANQEEETGAAPTAAKKSEPLPS
Ga0335082_108397691	3300032782	Soil	VLTTARHLAVLSNGDSGPEENWAGTLDSLMSMNTEITIMERILRALMEANREEETATPLAVPGKKNEPLPS
Ga0335070_107760512	3300032829	Soil	TARHLAVLSNGDSGPEENWAGTLDSLMSMNTEITIMERILRALMEANREEESATPLAVPGKKNEPLPS
Ga0335070_120292971	3300032829	Soil	LKLASDAVLTTARHLAVLSNGDSGPEENWAGTLDSLMSMNTEITIMERILRALMEANREEETATPLAVPGKKNEPLPS
Ga0335069_107900801	3300032893	Soil	NGDSGPEENWAGTLDSLMSMNTEITIMERILRALMEANREEESATPLAVPGKKNEPLPS
Ga0316603_123183602	3300033413	Soil	RHLAVLSNGNTGPEEHWAGTLDSLMSMNTEITVMERILRALMEANREEEAGAIAVGAKKSEPMPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072218

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences