Metagenome / Metatranscriptome Family F072212

Basic Information
Family ID	F072212
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	44 residues
Representative Sequence	LVAAFDAVRAGKVQPSPDSPGKVLYKVDDISFLMRAPAAH
Number of Associated Samples	109
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.04 %
% of genes from short scaffolds (< 2000 bps)	85.95 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Bacteria (70.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.661 % of family members)
Environment Ontology (ENVO)	Unclassified (19.835 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.025 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 23.53% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF06684	AA_synth	23.97
PF00144	Beta-lactamase	8.26
PF13520	AA_permease_2	7.44
PF02358	Trehalose_PPase	2.48
PF00561	Abhydrolase_1	1.65
PF00326	Peptidase_S9	1.65
PF01926	MMR_HSR1	1.65
PF07859	Abhydrolase_3	1.65
PF00072	Response_reg	1.65
PF13419	HAD_2	0.83
PF13590	DUF4136	0.83
PF13442	Cytochrome_CBB3	0.83
PF01266	DAO	0.83
PF12697	Abhydrolase_6	0.83
PF07690	MFS_1	0.83
PF02861	Clp_N	0.83
PF01058	Oxidored_q6	0.83
PF01850	PIN	0.83
PF02566	OsmC	0.83
PF13565	HTH_32	0.83
PF03572	Peptidase_S41	0.83
PF01243	Putative_PNPOx	0.83
PF12158	DUF3592	0.83
PF00583	Acetyltransf_1	0.83
PF13847	Methyltransf_31	0.83
PF12847	Methyltransf_18	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	8.26
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	8.26
COG2367	Beta-lactamase class A	Defense mechanisms [V]	8.26
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	2.48
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.65
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.83
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.83
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.83
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.83
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.83
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.25 %
Unclassified	root	N/A	29.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.25 %
Unclassified	root	N/A	29.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.25 %
Unclassified	root	N/A	29.75 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.58 %
Unclassified	root	N/A	29.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.31 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.13 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.65 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.13 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.65 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.13 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.83 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.83 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10740852	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300001686\|C688J18823_10180700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300001867\|JGI12627J18819_10464505	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300002245\|JGIcombinedJ26739_100057564	All Organisms → cellular organisms → Bacteria	3553	Open in IMG/M
3300002245\|JGIcombinedJ26739_100534466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005435\|Ga0070714_100176857	Not Available	1939	Open in IMG/M
3300005439\|Ga0070711_100153364	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300005439\|Ga0070711_101195229	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300005454\|Ga0066687_10750767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005467\|Ga0070706_101617079	Not Available	591	Open in IMG/M
3300005538\|Ga0070731_10139017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1610	Open in IMG/M
3300005538\|Ga0070731_10381492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300005541\|Ga0070733_10050055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2615	Open in IMG/M
3300005568\|Ga0066703_10027981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2997	Open in IMG/M
3300005602\|Ga0070762_10166473	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005610\|Ga0070763_10600502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	638	Open in IMG/M
3300005764\|Ga0066903_102679913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300005921\|Ga0070766_10451538	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006046\|Ga0066652_101935147	Not Available	528	Open in IMG/M
3300006059\|Ga0075017_100090406	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300006102\|Ga0075015_100438083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300006162\|Ga0075030_101585267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300006755\|Ga0079222_12136980	Not Available	555	Open in IMG/M
3300006871\|Ga0075434_102590531	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300006914\|Ga0075436_100669998	Not Available	767	Open in IMG/M
3300009520\|Ga0116214_1142160	All Organisms → cellular organisms → Bacteria → Acidobacteria	891	Open in IMG/M
3300009521\|Ga0116222_1511558	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300009545\|Ga0105237_11486370	Not Available	684	Open in IMG/M
3300009698\|Ga0116216_10726160	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009824\|Ga0116219_10391624	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	775	Open in IMG/M
3300009826\|Ga0123355_10562268	Not Available	1373	Open in IMG/M
3300009839\|Ga0116223_10749540	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300010360\|Ga0126372_11898624	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300010376\|Ga0126381_100948279	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300010376\|Ga0126381_104884328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	515	Open in IMG/M
3300010379\|Ga0136449_101050651	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300012210\|Ga0137378_10709353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300012363\|Ga0137390_11166510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300012469\|Ga0150984_108970747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1543	Open in IMG/M
3300014156\|Ga0181518_10605824	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300014162\|Ga0181538_10729476	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014169\|Ga0181531_10292884	All Organisms → cellular organisms → Bacteria → Acidobacteria	995	Open in IMG/M
3300014200\|Ga0181526_10531269	Not Available	744	Open in IMG/M
3300014489\|Ga0182018_10235219	Not Available	1013	Open in IMG/M
3300016701\|Ga0181509_1375248	Not Available	607	Open in IMG/M
3300017972\|Ga0187781_10647531	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300017973\|Ga0187780_10178652	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018006\|Ga0187804_10289299	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300018032\|Ga0187788_10424093	Not Available	563	Open in IMG/M
3300018046\|Ga0187851_10238099	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300018085\|Ga0187772_10469826	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300018085\|Ga0187772_11349260	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300018468\|Ga0066662_10035719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3013	Open in IMG/M
3300020579\|Ga0210407_10705856	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300020581\|Ga0210399_10914505	Not Available	711	Open in IMG/M
3300020582\|Ga0210395_10817160	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300020583\|Ga0210401_10164841	All Organisms → cellular organisms → Bacteria → Acidobacteria	2068	Open in IMG/M
3300020583\|Ga0210401_10748735	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300021168\|Ga0210406_11200484	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300021170\|Ga0210400_10163426	All Organisms → cellular organisms → Bacteria → Acidobacteria	1798	Open in IMG/M
3300021170\|Ga0210400_11181745	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300021178\|Ga0210408_10547725	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300021180\|Ga0210396_10262844	Not Available	1533	Open in IMG/M
3300021405\|Ga0210387_10149194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1999	Open in IMG/M
3300021405\|Ga0210387_10736299	Not Available	873	Open in IMG/M
3300021406\|Ga0210386_10936842	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300021406\|Ga0210386_11467393	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300021433\|Ga0210391_10429190	Not Available	1037	Open in IMG/M
3300021474\|Ga0210390_10177003	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300021477\|Ga0210398_10028293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4709	Open in IMG/M
3300021478\|Ga0210402_11187483	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300021559\|Ga0210409_10189916	Not Available	1873	Open in IMG/M
3300021861\|Ga0213853_10277271	Not Available	530	Open in IMG/M
3300022528\|Ga0242669_1076878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300024271\|Ga0224564_1006489	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300025134\|Ga0207416_1222025	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300025922\|Ga0207646_11612808	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300025928\|Ga0207700_11749573	Not Available	547	Open in IMG/M
3300025929\|Ga0207664_11605633	Not Available	572	Open in IMG/M
3300025939\|Ga0207665_10063425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2509	Open in IMG/M
3300025945\|Ga0207679_10752636	Not Available	886	Open in IMG/M
3300026116\|Ga0207674_10795296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300026983\|Ga0207856_1036074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300027604\|Ga0208324_1202554	Not Available	526	Open in IMG/M
3300027648\|Ga0209420_1073273	Not Available	996	Open in IMG/M
3300027884\|Ga0209275_10848289	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300027895\|Ga0209624_10243672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1195	Open in IMG/M
3300028773\|Ga0302234_10465903	Not Available	540	Open in IMG/M
3300028808\|Ga0302228_10523581	Not Available	522	Open in IMG/M
3300028906\|Ga0308309_10353368	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300030707\|Ga0310038_10347931	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031231\|Ga0170824_103922958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1303	Open in IMG/M
3300031231\|Ga0170824_117680181	Not Available	562	Open in IMG/M
3300031234\|Ga0302325_10643204	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1547	Open in IMG/M
3300031446\|Ga0170820_10912939	Not Available	548	Open in IMG/M
3300031446\|Ga0170820_17198879	Not Available	562	Open in IMG/M
3300031545\|Ga0318541_10847014	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300031718\|Ga0307474_10504671	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300031730\|Ga0307516_11014774	Not Available	503	Open in IMG/M
3300031748\|Ga0318492_10664223	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	558	Open in IMG/M
3300031833\|Ga0310917_10031561	All Organisms → cellular organisms → Bacteria	3136	Open in IMG/M
3300031946\|Ga0310910_10186560	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300031962\|Ga0307479_11816789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032001\|Ga0306922_10390404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300032059\|Ga0318533_11049252	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300032160\|Ga0311301_10292960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2618	Open in IMG/M
3300032160\|Ga0311301_10842397	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300032174\|Ga0307470_10030338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2563	Open in IMG/M
3300032205\|Ga0307472_100129311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1803	Open in IMG/M
3300032783\|Ga0335079_11445556	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300032805\|Ga0335078_11885786	Not Available	645	Open in IMG/M
3300032828\|Ga0335080_10943105	Not Available	882	Open in IMG/M
3300033004\|Ga0335084_11163787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300033158\|Ga0335077_10463677	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300033808\|Ga0314867_044985	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.39%
Host-Associated	Host-Associated	6.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.47%
Aquatic	Environmental → Aquatic	9.92%
Plants	Host-Associated → Plants	5.79%
Arthropoda	Host-Associated → Arthropoda	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.99%
Freshwater	Environmental → Aquatic → Freshwater	6.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.13%
Sediment	Environmental → Aquatic → Sediment	2.48%
Peat	Environmental → Terrestrial → Peat	2.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.89%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.48%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.83%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_107408521	3300001593	Forest Soil	TLLPRLVAAFDAVRAGKVQPSPDSPGKVLYKVDDISFLMRAPDAH*
C688J18823_101807001	3300001686	Soil	PSVLGGLVVAFDKVQAGKVPAVADSPGKVLYKVDGFSFLMRTPSH*
JGI12627J18819_104645052	3300001867	Forest Soil	VLPRLVAAFDTVRAGKVAAVPDSPGKVLYKVGDISFLMRARTP*
JGIcombinedJ26739_1000575644	3300002245	Forest Soil	PVRAGKVQPSPDSPGKVLYKVDDIPFLMRAPDAR*
JGIcombinedJ26739_1005344661	3300002245	Forest Soil	PTVLARLVMAFDAVRAGKIKPVPEPAGKVLYKVDDISFLMRDPAAH*
Ga0066678_104034732	3300005181	Soil	TAFQTVRAGKTSATPAAAGRVIYKVDDISFLMRSPESKH*
Ga0070714_1001768573	3300005435	Agricultural Soil	SVLARLVNAFDEVRAGRVIATPASPGQVIYKVGEISFLMRAGTTKR*
Ga0070711_1001533643	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LVTAFDVVRAGKVQPSPDSPGKVLYKVDDISFLMRAPAAP*
Ga0070711_1011952292	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LVTAFDVVRAGKVQPSPDSPGKVLYKVDDISFLMRAPAAH*
Ga0066687_107507671	3300005454	Soil	VLEQLVSAFHKVQSGKVPAVPNSPGKVLYKVDGVSFLMRPPSH*
Ga0070706_1016170791	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	APPSVLPRLVTAFQTVRAGKGSATPAAAGRVIYKVDYISFLMRSPESKH*
Ga0070731_101390171	3300005538	Surface Soil	GAHNIPVAKPTVVAELAEAFDAVRAGKVKPTPDSPGKVLYKVGDITFLMRAPADK*
Ga0070731_103814921	3300005538	Surface Soil	RAGKIPPAPADPGTVIYKVDDISFLMRAPVRTSQ*
Ga0070733_100500555	3300005541	Surface Soil	ASPTVLARLVVAFDAVRAGKIKPVPDSPGKVLYKVDDISFLMRAPTAH*
Ga0066703_100279815	3300005568	Soil	LPRLVSAFDAVRAGKVAGTPAPGGKVLYTVNGITFLMRAP*
Ga0070762_101664733	3300005602	Soil	VAAFDAVRAGKVQPSPDAPGKVLYKVEDISFLMQAPAAH*
Ga0070763_106005021	3300005610	Soil	VASPEVLIRLVAAFDAVRAGKVMPTADSPGKVLYKIGDISFLMRAPQGK*
Ga0066903_1026799133	3300005764	Tropical Forest Soil	AKTAVLAELVDAFDAVRAGKVKPTPDSLGKVLYRAGNISFLMRAPAGK*
Ga0070766_104515382	3300005921	Soil	LVAAFDAVRAGKVQPSPDSPGKVLYKVDDISFLMRAPAAH*
Ga0066652_1019351471	3300006046	Soil	AFKQVRASKVAGTPASSGKVLYKVGEISFLMRSQAASKH*
Ga0075017_1000904062	3300006059	Watersheds	VMGAHNIPVASPAVLPRLVAAFDVVRAGKIQPSADSPGKVLYKVDNISFLMRVPAAH*
Ga0075015_1004380832	3300006102	Watersheds	FDAVRAGKIPATPASAGKVTYKVDDITFLMKAKESAP*
Ga0075030_1015852672	3300006162	Watersheds	VDAFDAVRAGKIPATPASAGKVTYKVDDITFLMKAKESAP*
Ga0079222_121369802	3300006755	Agricultural Soil	GAHNIPVASASVLPRLVSAFEAVRAGKVAGKPAPGGKILYTVNGITFLMRAP*
Ga0075434_1025905311	3300006871	Populus Rhizosphere	IPVAQPKVLSELVSTFDEVRAGKVPPAPDSPGKVRYKVGEIVFLMRAPNK*
Ga0075436_1006699982	3300006914	Populus Rhizosphere	PRLVAAFDIVRAGKATPTPESPGRVLYKVDNIPFLMRAPGK*
Ga0116214_11421602	3300009520	Peatlands Soil	AVLARLVAAFDAVRAGKVTATPDSPGKVLYKVDDISFLMRAPDKTPHPQP*
Ga0116222_15115581	3300009521	Peatlands Soil	VLARLVTAFDAVRAGKVTATPDSPGKVLYKVDDISFLMRAPDKTRHPQP*
Ga0105237_114863701	3300009545	Corn Rhizosphere	SVLPRLVSAFDAVRAGKVAGKPAPGGKILYTVNGIIFLMHAP*
Ga0116216_107261602	3300009698	Peatlands Soil	LVAAFDKVRVGKVLPEPDSPGKVLYKVDDISFLMRAPGSR*
Ga0116219_103916242	3300009824	Peatlands Soil	FAFEAVRAGKVPPAPASSGKVLYKVDDFSFLMQAPPSKL*
Ga0123355_105622682	3300009826	Termite Gut	FDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPAAH*
Ga0116223_107495401	3300009839	Peatlands Soil	RLVAAFDKVRAWKVLPEPDSPGKVLYKVDDISFLMRAPGSR*
Ga0126372_118986242	3300010360	Tropical Forest Soil	AAFDAVRSGKVPPTPADPGQVIYTADGISFLMRAPDAKTN*
Ga0126381_1009482792	3300010376	Tropical Forest Soil	DQVRAGKVPATPGEDGKVLYKVGNISFLMRAPQKATK*
Ga0126381_1048843281	3300010376	Tropical Forest Soil	LVAAFDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPAAH*
Ga0136449_1010506511	3300010379	Peatlands Soil	AVLARLVAAFDAVRAGKVTATPDSPGKVLYKVDDISFLMRAPTPHQQP*
Ga0137365_103946061	3300012201	Vadose Zone Soil	LPRLVTAFQTVRAGKASATPAAAGRVIYKVDDISFLMRSPESKH*
Ga0137378_107093531	3300012210	Vadose Zone Soil	AFDKVQSGKVPAVPNSPGKVLYKVDGVSFLMRPPSH*
Ga0137371_104271842	3300012356	Vadose Zone Soil	SVLPRLVTAFQTVRAGKASATPAAAGRVIYKVDDISFLMRSPESKH*
Ga0137390_111665101	3300012363	Vadose Zone Soil	RIVAAFDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPAAH*
Ga0150984_1089707475	3300012469	Avena Fatua Rhizosphere	GLVVAFDKVQAGKVPAVADSPGKVLYKVDGFSFLMRTPSH*
Ga0181518_106058241	3300014156	Bog	AAFDAVRAGRVPATPAEAGKVIYTVDDISFLMRGP*
Ga0181538_107294761	3300014162	Bog	TRLVTAFEAVRAGRIPATPAEPGKVIYKVGDISFLMRAPE*
Ga0181531_102928843	3300014169	Bog	FDEVRAGKVQPTPAGDGKVLYKVGDISFLMKAPAAR*
Ga0181526_105312692	3300014200	Bog	VAAFDAVRAGNIQPSPDSPGKVLYKVDVPLMRAPAAR*
Ga0182018_102352192	3300014489	Palsa	VVMGAHNIPVASPTLLPRLVAAFDAVRAGKVQPSPDSPGKALYKVDEISFVMRAPAEH*
Ga0181509_13752482	3300016701	Peatland	APPSVLASLVQAFDVIRAGKVRPAPASRGKITYKVDDISFMMAAP
Ga0187781_106475312	3300017972	Tropical Peatland	SILPKLVSAFDAVRAGKISPTPDSPSRVLYKVGDISFLMRTPPP
Ga0187780_101786521	3300017973	Tropical Peatland	PSVLARLVAAFDVVRAGKVAATPDSPGKVLYKVEDISFLMRAPDATNRHKP
Ga0187804_102892991	3300018006	Freshwater Sediment	HNIPVASPAVLARLVSAFDLVRGGKVAPTPDSPGKVLYKVDDISFVMKKPDTP
Ga0187788_104240931	3300018032	Tropical Peatland	KLVTAFDVVRAGQVKAEPASPGKVLYKVDDITFLMKAPEAKP
Ga0187851_102380992	3300018046	Peatland	VLQHLVVAFETVRAGKIAPVAAGKGKVTYKVGDISFLMRAP
Ga0187772_104698261	3300018085	Tropical Peatland	LVSAFDKVQAGKVAPTPDSPGKVLYRVNGFSFVMKTPDTP
Ga0187772_113492601	3300018085	Tropical Peatland	SAFDEVRAGRIATSPASAGRVLYKVDEFSFLMRAPASR
Ga0066662_100357191	3300018468	Grasslands Soil	RLVTAFEAVRAGKVAGTPQAEGKMLYKVGDISFLMRAPSSH
Ga0066669_109402372	3300018482	Grasslands Soil	SVLPRLVTAFQTVRAGKTSATPAAAGRVIYKVDDISFLMRSPESKH
Ga0210407_107058562	3300020579	Soil	AFNAVRAGKVQPSPDSPGKVLYKADDISFLMRAPPAH
Ga0210399_109145051	3300020581	Soil	DAGRAGKIKPLPDSPGKVLYKVEDISFLMRAPTAH
Ga0210395_108171602	3300020582	Soil	FDQVRAGKIAATPDSPGKVLYKVDDISFLMRAPDATNHQKP
Ga0210401_101648411	3300020583	Soil	AHNIPVAKPDVLPRLVTAFDAVRAGKVTPTPASSEKVLYKINDITFLMRAPESKP
Ga0210401_107487352	3300020583	Soil	TILPRLVAAFNAVRAGKVQPSPDSPGKVLYKADDISFLMRAPPAH
Ga0210406_112004841	3300021168	Soil	IPVASPTLLPRLVAAFDAVRAGKVQPSPDSSGKVLYKVDDISFLMNPPAAH
Ga0210400_101634261	3300021170	Soil	FDAVRADKVTLKPASPGKVTYEIDGITFLMKAPEPKP
Ga0210400_111817451	3300021170	Soil	LVAAFDAVRAGKVMPTADSPGKVLYNIGDISFLMRAPQGK
Ga0210408_105477251	3300021178	Soil	AVRTGQVTPKPASSGKVTYEIDGITFLMKAPEPKP
Ga0210396_102628441	3300021180	Soil	ASPTLLPRLVAAFDAVRAGKVQPSPDSSGRVLYKVDDISFLMNPPAAH
Ga0210387_101491944	3300021405	Soil	NIPVASPDVLSRLVTAFDEVRAGKVLSTPDSAGKVLYKVGDITFLMKPPAAAAR
Ga0210387_107362992	3300021405	Soil	PAFDSVRAGKVSPIPESPGKVLYRVDDISFLMRATDTR
Ga0210386_109368422	3300021406	Soil	AAFDAVRAGKVQPSPDSSGKVLYKVDDISFLMNPPAAH
Ga0210386_114673932	3300021406	Soil	VAAFDAVRAGKVQPSPDSSGKVLYKVDDISFLMNPPAAH
Ga0210391_104291902	3300021433	Soil	TVLPRLVAAFDAVRAGKVQPSPDSPGKVLYKVDGISFLMLAPAAH
Ga0210390_101770031	3300021474	Soil	NVPVASPAQLPKLVAAFDAVRAGKVQPLPDSPGKVLYKVDGISFLMRAAAAH
Ga0210398_100282931	3300021477	Soil	PRLVVAFDAVRAGKIKPVSDSPGKVLYKAGDISFLMRDPAAR
Ga0210402_111874832	3300021478	Soil	FNAVRAGKVQPSPDSLGKVLYKADDISFLMRAPPAH
Ga0210409_101899162	3300021559	Soil	PIASPTVLPRLVAAFDAVRAGKVQPSPDSPGKVLYKVDGISFMMLAPAAH
Ga0213853_102772711	3300021861	Watersheds	AAMRSGKVTPTPDSPGKVLYKVGDISFLVAAPTAK
Ga0242669_10768782	3300022528	Soil	ASPAVLGQLVSAFDKVQFRKVPAVPESPGKVLYKVDGFSFLMSTDSR
Ga0224564_10064891	3300024271	Soil	AHNIPVAPPPVLPRLVAAFDAVRAGKVSASPDSPGKAIYKIDNISFLMRAPPAAH
Ga0207416_12220252	3300025134	Iron-Sulfur Acid Spring	RLRVVMGAHNIPVASPTLLPRLVAAFDAVRGGKVQPSPDSPGKVLYKVDDISFVIRAPSA
Ga0207646_116128082	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AFDAVRAGKVRPVPASPGKVLYTVGDISFLMRANTR
Ga0207700_117495731	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LVLGAHNIPVAPASVLPSLVSAFDAVRAGKVSGTAAPGGKVLYTVNGSTFLMRAP
Ga0207664_116056332	3300025929	Agricultural Soil	LGAHNIPVASASVLPRLVSAFDAVRAGKVAGKPAPGGKILYILNGITFLMRAP
Ga0207665_100634255	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KLVTAFDAVRTGKVVPTAASPGKVLYKVDDISFLMRAPATH
Ga0207679_107526361	3300025945	Corn Rhizosphere	NVPVAPASVLPRLVAAFDAVRAGKVAGTPAPGGKVLYTVNGITFLMRAP
Ga0207674_107952961	3300026116	Corn Rhizosphere	RLVSAFEAARAGKVAGKPAPGGKILYTVNGITFLMRAP
Ga0209803_12683332	3300026332	Soil	LQTVRAGKTSATPAAAGRVIYKVDDISFLMRSPESKH
Ga0209378_10038341	3300026528	Soil	PSVLPRLVTAFQTVRAGKTSATPAAAGRVIYKVDDISFLMRSPESKH
Ga0207856_10360741	3300026983	Tropical Forest Soil	AHNVPVAPPSVLGRLVAAFDRVHAGKVAAIPDSPGKVLYKIDGFSFLMRSGTP
Ga0208324_12025541	3300027604	Peatlands Soil	LVAAFDEVRAGKTKPTPDSPGKVLYKVEDISFLMHAPAGH
Ga0209420_10732731	3300027648	Forest Soil	TVLARLVVAFDAVRAGKIKPVPDSPGKALYKVDDISFLMRDSAAH
Ga0209275_108482892	3300027884	Soil	PRLVAAFDVVRAGKVQPSPDSPGKVLYKVDDISFLMNAPAAH
Ga0209624_102436722	3300027895	Forest Soil	AAFDAVEAGKIPATANSPGRVIYTVGDISFLMRAPK
Ga0302234_104659032	3300028773	Palsa	AFDEVRAGTIRPVPDSSGNVLYKVDDISFLMRAPTAH
Ga0302228_105235812	3300028808	Palsa	SPTVLGRLVAAFDEVRAGTIRPVPDSSGNVLYKVDDISFLMRAPTAH
Ga0308309_103533682	3300028906	Soil	SVLPRLVEAFDAVRAGKVTATPDSPGKVLYKVGDLSFLMRAPTTP
Ga0310038_103479312	3300030707	Peatlands Soil	LVAAFDQVRAGKVLPEPDSPGKVLYKVDDFSFLMRAPGSR
Ga0170824_1039229581	3300031231	Forest Soil	LVAAFDAVRAGKVAATPDSPGKVLYKVDDISFLMRAPTVH
Ga0170824_1176801812	3300031231	Forest Soil	LAQLVTAFDGVRAGKVAATPDSLGKVLYKVGDISFLMRTPDAH
Ga0302325_106432041	3300031234	Palsa	ASPTVLPRLASAFDRVRAGKATPTPDSPGYVIYKVDGFSFLMRAPAAH
Ga0170820_109129392	3300031446	Forest Soil	SPTVLPRLVAAFDAVRAGKVAATPDSPGKVLYKVDGISFLMRAPTVH
Ga0170820_171988792	3300031446	Forest Soil	VLSRLVLAFAAVRAGKVPAVPESPGKVIYKVDGISFLMKSPASAAR
Ga0318541_108470141	3300031545	Soil	DVLTKLVLAFAAVRAGKIQPLPDSPERVVYKVGDISFLMRAPTAHLR
Ga0307474_105046712	3300031718	Hardwood Forest Soil	PVASPAVLQQLVAAFETVRAGKVAAIPAGAGKATYKVGAISFLMRAP
Ga0307516_110147741	3300031730	Ectomycorrhiza	FDGVRAGKVAATPDSPGKVLYKVGDISFLMRTPDAH
Ga0318492_106642232	3300031748	Soil	TVLPRLVAAFDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPTAH
Ga0310917_100315613	3300031833	Soil	LVAAFDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPAAH
Ga0310910_101865601	3300031946	Soil	IFPSHLVAAFDAVRAGKIQPSPDSPGKVLYKVDDISFLMRAPTAHLR
Ga0307479_118167891	3300031962	Hardwood Forest Soil	EQLVSAFDKVQSGKVTGAPDSPGKVLYKVDGVSFLMRAPSH
Ga0306922_103904041	3300032001	Soil	SRPDVLPRLVTAFDQVRAGKVAPTPATDSKVLYKVDGFSFLMRPISR
Ga0318533_110492521	3300032059	Soil	FRPETDLDARLVTAFDVVRAGKVPPSPDSPGKVLYKVDDISFLMRAPAAH
Ga0311301_102929601	3300032160	Peatlands Soil	LVTAFDAVRAGKVTPTPDSPGKVLYKVGDISFLMRAPAAH
Ga0311301_108423971	3300032160	Peatlands Soil	AAFDAVRAAKVTATPDSPGKVLYKVDDISFLMRAPTPHQQP
Ga0307470_100303385	3300032174	Hardwood Forest Soil	PRLVTAFDAVRAGKVLPTPDSPGKVLYKVDDISFLMRAPLAH
Ga0307472_1001293111	3300032205	Hardwood Forest Soil	GAHNIPVAQPEVLGKLVTAFDAVRAGKIAPEPASPGKVLYKTEGITFLMRPPDAK
Ga0335079_114455561	3300032783	Soil	PSVLPRLVTAFEKVRAGKVTAIPESEGKVTYKVDGFSFLMRAPSNQK
Ga0335078_118857862	3300032805	Soil	LGAHNIPVAEAKVLIELVSAFETVRAGRVAPTPDSPGTVRYKVGDIVFLMRATNR
Ga0335080_109431052	3300032828	Soil	EPSVLPRLVTAFDAVRAGTVKPEPEPPGKVLYKIDGFTFLMKAPQ
Ga0335084_111637872	3300033004	Soil	ASPSVLGQLVLAFDKLQSGKVPADPVSGGKVLYRVDGFSFLMRAPAR
Ga0335077_104636774	3300033158	Soil	ELVSSFDVVRAGKVVPTPDSPGRVRYKVGDIVFLMRAPNK
Ga0314867_044985_908_1033	3300033808	Peatland	LVAAFDAVRAGQVAAKPASAGKVTYTVDDITFLMPAPEAKP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072212

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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