Metagenome / Metatranscriptome Family F072202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	66 residues
Representative Sequence	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Number of Associated Samples	98
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.83 %
% of genes near scaffold ends (potentially truncated)	26.45 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (37.190 % of family members)
Environment Ontology (ENVO)	Unclassified (49.587 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.504 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.37% Coil/Unstructured: 72.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13464	DUF4115	4.13
PF01053	Cys_Met_Meta_PP	3.31
PF05239	PRC	2.48
PF09332	Mcm10	2.48
PF00571	CBS	1.65
PF01654	Cyt_bd_oxida_I	1.65
PF00753	Lactamase_B	1.65
PF00300	His_Phos_1	0.83
PF07366	SnoaL	0.83
PF01179	Cu_amine_oxid	0.83
PF04545	Sigma70_r4	0.83
PF01568	Molydop_binding	0.83
PF00291	PALP	0.83
PF01510	Amidase_2	0.83
PF00069	Pkinase	0.83
PF08125	Mannitol_dh_C	0.83
PF13384	HTH_23	0.83
PF07731	Cu-oxidase_2	0.83
PF02839	CBM_5_12	0.83
PF14333	DUF4389	0.83
PF04542	Sigma70_r2	0.83
PF10646	Germane	0.83
PF12802	MarR_2	0.83
PF13783	DUF4177	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	3.31
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	3.31
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	3.31
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	3.31
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.31
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	3.31
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	3.31
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	3.31
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	3.31
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	3.31
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	3.31
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	3.31
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	1.65
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.87 %
Unclassified	root	N/A	4.13 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.43 %
Unclassified	root	N/A	4.13 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	87.60 %
Unclassified	root	N/A	4.13 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	38.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.70 %
Unclassified	root	N/A	4.13 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	38.84 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.70 %
Unclassified	root	N/A	4.13 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.65 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	38.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.70 %
Unclassified	root	N/A	4.13 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_2_20CM_68_14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	38.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.70 %
Unclassified	root	N/A	4.13 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10077700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1817	Open in IMG/M
3300000956\|JGI10216J12902_104729523	Not Available	889	Open in IMG/M
3300005172\|Ga0066683_10101066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1750	Open in IMG/M
3300005338\|Ga0068868_100142397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1969	Open in IMG/M
3300005339\|Ga0070660_100886191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300005356\|Ga0070674_101183938	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300005366\|Ga0070659_100182477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1723	Open in IMG/M
3300005439\|Ga0070711_100437373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300005444\|Ga0070694_101511011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300005467\|Ga0070706_100052398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3766	Open in IMG/M
3300005468\|Ga0070707_100986719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300005471\|Ga0070698_100021412	All Organisms → cellular organisms → Bacteria	6772	Open in IMG/M
3300005518\|Ga0070699_100043295	All Organisms → cellular organisms → Bacteria	3897	Open in IMG/M
3300005518\|Ga0070699_101410346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	639	Open in IMG/M
3300005536\|Ga0070697_100124035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2163	Open in IMG/M
3300005540\|Ga0066697_10792082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	515	Open in IMG/M
3300005549\|Ga0070704_100316163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300005558\|Ga0066698_10631527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300005563\|Ga0068855_101123120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300006791\|Ga0066653_10136942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300006791\|Ga0066653_10657797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	537	Open in IMG/M
3300006797\|Ga0066659_10961985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	714	Open in IMG/M
3300009090\|Ga0099827_10004334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8312	Open in IMG/M
3300009137\|Ga0066709_102749620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	654	Open in IMG/M
3300009137\|Ga0066709_104133687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	528	Open in IMG/M
3300010301\|Ga0134070_10127719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	901	Open in IMG/M
3300010323\|Ga0134086_10367230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	572	Open in IMG/M
3300010333\|Ga0134080_10485356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	585	Open in IMG/M
3300010335\|Ga0134063_10515568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	600	Open in IMG/M
3300010373\|Ga0134128_11701639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300010400\|Ga0134122_11316125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	731	Open in IMG/M
3300010401\|Ga0134121_11824861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	635	Open in IMG/M
3300010905\|Ga0138112_1141140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	517	Open in IMG/M
3300012198\|Ga0137364_10038224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3121	Open in IMG/M
3300012198\|Ga0137364_10076837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2299	Open in IMG/M
3300012199\|Ga0137383_10495711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	894	Open in IMG/M
3300012199\|Ga0137383_10778961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300012200\|Ga0137382_10664207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	746	Open in IMG/M
3300012201\|Ga0137365_10026413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4483	Open in IMG/M
3300012201\|Ga0137365_10224103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1402	Open in IMG/M
3300012201\|Ga0137365_10279691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1238	Open in IMG/M
3300012201\|Ga0137365_10280198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1237	Open in IMG/M
3300012201\|Ga0137365_10329079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1130	Open in IMG/M
3300012204\|Ga0137374_10000554	All Organisms → cellular organisms → Bacteria	38124	Open in IMG/M
3300012204\|Ga0137374_10002244	All Organisms → cellular organisms → Bacteria	22709	Open in IMG/M
3300012204\|Ga0137374_10002664	All Organisms → cellular organisms → Bacteria	20908	Open in IMG/M
3300012204\|Ga0137374_11208268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	529	Open in IMG/M
3300012206\|Ga0137380_10360398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1296	Open in IMG/M
3300012207\|Ga0137381_10053164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3349	Open in IMG/M
3300012207\|Ga0137381_10453455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1119	Open in IMG/M
3300012207\|Ga0137381_11123071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	676	Open in IMG/M
3300012208\|Ga0137376_11567724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	550	Open in IMG/M
3300012209\|Ga0137379_10184940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1996	Open in IMG/M
3300012209\|Ga0137379_10268944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1616	Open in IMG/M
3300012209\|Ga0137379_10962045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	759	Open in IMG/M
3300012210\|Ga0137378_10230986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1723	Open in IMG/M
3300012210\|Ga0137378_10436040	Not Available	1214	Open in IMG/M
3300012210\|Ga0137378_11273700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	652	Open in IMG/M
3300012210\|Ga0137378_11422696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	606	Open in IMG/M
3300012210\|Ga0137378_11726238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	532	Open in IMG/M
3300012211\|Ga0137377_10131353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2393	Open in IMG/M
3300012349\|Ga0137387_10184687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1494	Open in IMG/M
3300012350\|Ga0137372_10770631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	692	Open in IMG/M
3300012355\|Ga0137369_10323222	Not Available	1136	Open in IMG/M
3300012355\|Ga0137369_11127451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	510	Open in IMG/M
3300012356\|Ga0137371_10677149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300012356\|Ga0137371_11051631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	614	Open in IMG/M
3300012357\|Ga0137384_10494108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	1005	Open in IMG/M
3300012358\|Ga0137368_10520945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	764	Open in IMG/M
3300012359\|Ga0137385_10301299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1379	Open in IMG/M
3300012360\|Ga0137375_10689035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300012362\|Ga0137361_10457496	Not Available	1172	Open in IMG/M
3300012929\|Ga0137404_10023309	All Organisms → cellular organisms → Bacteria	4499	Open in IMG/M
3300012930\|Ga0137407_11472075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	648	Open in IMG/M
3300012930\|Ga0137407_12203619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	526	Open in IMG/M
3300012957\|Ga0164303_10653513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300012976\|Ga0134076_10303716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	692	Open in IMG/M
3300012984\|Ga0164309_11944510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	504	Open in IMG/M
3300012986\|Ga0164304_11603708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	542	Open in IMG/M
3300013307\|Ga0157372_10300125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1868	Open in IMG/M
3300013768\|Ga0120155_1091816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	855	Open in IMG/M
3300014497\|Ga0182008_10754628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	561	Open in IMG/M
3300015357\|Ga0134072_10324696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	582	Open in IMG/M
3300017657\|Ga0134074_1181064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	743	Open in IMG/M
3300017792\|Ga0163161_10286484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300017965\|Ga0190266_10685337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	637	Open in IMG/M
3300018027\|Ga0184605_10022893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2526	Open in IMG/M
3300018061\|Ga0184619_10134361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1124	Open in IMG/M
3300018433\|Ga0066667_10344712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1181	Open in IMG/M
3300021418\|Ga0193695_1109326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	586	Open in IMG/M
3300022534\|Ga0224452_1201889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300022756\|Ga0222622_10021151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3314	Open in IMG/M
3300025904\|Ga0207647_10344606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300025910\|Ga0207684_10595509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	944	Open in IMG/M
3300025915\|Ga0207693_10004399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11916	Open in IMG/M
3300025916\|Ga0207663_10322438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300025918\|Ga0207662_11190528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300025922\|Ga0207646_10013681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7749	Open in IMG/M
3300025932\|Ga0207690_11334497	Not Available	599	Open in IMG/M
3300025935\|Ga0207709_11617447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300026277\|Ga0209350_1129636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300026301\|Ga0209238_1191010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	601	Open in IMG/M
3300026310\|Ga0209239_1001124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15775	Open in IMG/M
3300026557\|Ga0179587_10998462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	551	Open in IMG/M
3300027018\|Ga0208475_1013945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300027882\|Ga0209590_10043734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2455	Open in IMG/M
3300028380\|Ga0268265_12013653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300028710\|Ga0307322_10066653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300028711\|Ga0307293_10007409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2973	Open in IMG/M
3300028717\|Ga0307298_10091313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300028721\|Ga0307315_10204110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300028782\|Ga0307306_10156153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	637	Open in IMG/M
3300028793\|Ga0307299_10076218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1246	Open in IMG/M
3300028796\|Ga0307287_10137012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	929	Open in IMG/M
3300028811\|Ga0307292_10147058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	950	Open in IMG/M
3300028878\|Ga0307278_10530483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_68_14	513	Open in IMG/M
3300028880\|Ga0307300_10103996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300028881\|Ga0307277_10005602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4820	Open in IMG/M
3300028884\|Ga0307308_10229501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300031716\|Ga0310813_10634281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	948	Open in IMG/M
3300033475\|Ga0310811_10455041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.08%
Host-Associated	Host-Associated	9.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.78%
Plants	Host-Associated → Plants	9.92%
Aquatic	Environmental → Aquatic	3.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.13%
Sediment	Environmental → Aquatic → Sediment	3.31%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.55%
Loam	Environmental → Terrestrial → Soil → Loam	13.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	61.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	37.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_100777003	3300000550	Soil	VRIPVALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPANDA*
JGI10216J12902_1047295231	3300000956	Soil	MPVAPLEIGTIVSYQGRLYVVVGITPMSVTPPLLELEDTENGRTRGVRADDSELVVEVAKRPSADDA*
Ga0066683_101010661	3300005172	Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRADDAELVVGVTKRPPADDA*
Ga0068868_1001423972	3300005338	Miscanthus Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0070660_1008861913	3300005339	Corn Rhizosphere	IGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADDA
Ga0070674_1011839381	3300005356	Miscanthus Rhizosphere	PVRMPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0070659_1001824773	3300005366	Corn Rhizosphere	MPVALFEIGTIVSYKGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0070711_1004373733	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADDA*
Ga0070694_1015110112	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DEAVDSLHAQTRMRMPVALFEIGTIVSYQGRLYVVLGGTPMSVTPALLEVEDTENGSIRRIRADDAELVVGVTKRPPADDA*
Ga0070706_1000523985	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRMPVALFEIGTIVSYQGRLYVVLGGTPMSVTPALLEVEDTENGSIRRVRADEAELVVGVTKRPPADDA*
Ga0070707_1009867192	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDS*
Ga0070698_1000214125	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAVFEIGTIISDQGRFHVVVGITPMSVTPPLLELEDTDSGRIRRVQGDDSQLVREPTKRPPADDE*
Ga0070699_1000432954	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTFVSYQGRLYAVLGVTPMSVKPASLEVEDTENGSIRRVRADDAELVVGVTKRPPADDA*
Ga0070699_1014103461	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTFVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDS*
Ga0070697_1001240353	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VRMPVALFEIGTIVSYQGRLFVILGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0066697_107920822	3300005540	Soil	VSVAVFEIGTIISYRGRLHVVVGTTPMSVTPPVLELEEIESGRIRRVRGDDPQLVVEETKRLPADDE*
Ga0070704_1003161633	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VRMPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADDA*
Ga0066698_106315272	3300005558	Soil	VAVFEIGTIVSYRGRLHVVVGITPMSVTPPLVELEDAESGRIRRVRGDDPQLVVET
Ga0068855_1011231201	3300005563	Corn Rhizosphere	VRMPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0066653_101369422	3300006791	Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDADNGSTRRVRADDAELVVGVTKRPPADDA*
Ga0066653_106577971	3300006791	Soil	VSVAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEDIESGRRVRGDDPQLVVEETKRLPADDE*
Ga0066659_109619851	3300006797	Soil	MPVALFEIGTFVSYQGRLYDVLGVTPMSVTPALLEVEDTKNGSIRRVRADDAELVVGVTKRPPADDA*
Ga0099827_100043346	3300009090	Vadose Zone Soil	VAVFEIGTIIRYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPTKRLPADDE*
Ga0066709_1027496201	3300009137	Grasslands Soil	MPVAPLEIGTIVNYQGRLYVVFGTTPMSVTPPLLELEDTENGDTRRVRADDPELVVEVTKRPPADDA*
Ga0066709_1041336872	3300009137	Grasslands Soil	VALFEIGTIVSYQGRLYVVIGVTPMSVRPALLELEDTENGSTRRVRADDPELVVGVTKKPPAVS*
Ga0134070_101277191	3300010301	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRVDDAELVVGVTKRPPADDA*
Ga0134086_103672301	3300010323	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRVDDADLVVGVTKRPPADDV*
Ga0134080_104853562	3300010333	Grasslands Soil	VALFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRADDAELVVGVTKRPPADDA*
Ga0134063_105155682	3300010335	Grasslands Soil	VAVFEIGTIISYRGRLHVVVGTTPMSVTPPVLELEEIESGRIRRVRGDDPQLVVEETKRLPADDE*
Ga0134128_117016393	3300010373	Terrestrial Soil	MPVALFEIGTIVSYQGRLFVILGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0134122_113161252	3300010400	Terrestrial Soil	MPAALFEIGTIVSYQGRLFVILGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDS*
Ga0134121_118248611	3300010401	Terrestrial Soil	MPVALFEIGTFVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADDA*
Ga0138112_11411401	3300010905	Grasslands Soil	VAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEEIESGRIRRVRGDDPQLVVEETKRLPANDE*
Ga0137364_100382242	3300012198	Vadose Zone Soil	MPVARLEIGTNVRYQGRLYVVLGITPMSVTPPLLELEDTENGGTRPVRADDPELVVEVTKRPPPDGA*
Ga0137364_100768371	3300012198	Vadose Zone Soil	VAVFEIGTIISYRGHLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEETKRLPADDE*
Ga0137383_104957112	3300012199	Vadose Zone Soil	VAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVQGDDPQLVVEATKRLPADDE*
Ga0137383_107789611	3300012199	Vadose Zone Soil	MFEIGTIMSYRGRLHVVVGSTPMSVTPVLELEDTESARIRRVRGDDPQLVVEATKRLQADDE*
Ga0137382_106642071	3300012200	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVIGVTPMSVRPALLELEDTENGSTRRVRADDPELVVGVTKKPPAVS*
Ga0137365_100264133	3300012201	Vadose Zone Soil	VALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPADDA*
Ga0137365_102241031	3300012201	Vadose Zone Soil	VAVFEIGTIVSYRGRLHVVVGMTPMSVTPPLVELEDAESGRTGRVRVDDPQLVVEAPEDPPGDDE*
Ga0137365_102796912	3300012201	Vadose Zone Soil	VAVFEIGTIIRYRGCLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPTKRLPADDE*
Ga0137365_102801982	3300012201	Vadose Zone Soil	VAVFEIGTIIRYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPRKRLPADDE*
Ga0137365_103290792	3300012201	Vadose Zone Soil	VAVLEIGTIVGYRGRLCVVLGITPMSVEPPLLELEDAESRRARRVRADDPELVVEVPKRPPADDA*
Ga0137374_1000055424	3300012204	Vadose Zone Soil	VFATVFEIGTIVSYRGRLHVVVCITPMSVTPPLVELEDIESGRIRRVRGDDPQLVVEATRRLPADDE*
Ga0137374_100022443	3300012204	Vadose Zone Soil	VFEIGTIVSYRGRLYVVVCITPMSVTPPLVELEDTESGRIRRVRGDDPQLVIEATRRLPADDE*
Ga0137374_100026647	3300012204	Vadose Zone Soil	VFVTVFEIGTIVSYRGRLHVVVCITPMSVTPPLVELEDTESGRIRRVRGDDPQLVVEATRRLPADDE*
Ga0137374_112082681	3300012204	Vadose Zone Soil	RVFATVFEIGTIVSYRGRLHVVVCITPMSVTPPLVELEDIESGRIRRVRADDPQLVVEATRRLPADDE*
Ga0137380_103603983	3300012206	Vadose Zone Soil	VAVLEIGTIVGYRGRLYVVVGITPMSVEPPLLELEDAESRRARRVRADDPELVVEVPKRPPADDA*
Ga0137381_100531645	3300012207	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRADDPELVVGVTKRHPADDA*
Ga0137381_104534552	3300012207	Vadose Zone Soil	VAVFEIGTIISYRGRFHVVIGITPMSVTPPLLELEDTESGRIRRVQGDDPQLVVEATKRLRADD
Ga0137381_111230711	3300012207	Vadose Zone Soil	VAVLEIGTIVGYRGRLYVVVGITPMSVTPPLLELEDAESRRARRVRADDPELVVEVPKRPPADDA*
Ga0137376_115677241	3300012208	Vadose Zone Soil	VAVLEIGTIVGYRGRIYVVVGITPMSVTPPLLELEDAESRRARRVRADDPELVVEVPKRPRTGDA*
Ga0137379_101849401	3300012209	Vadose Zone Soil	VAVLEIGTIVSYRGRLYVVVGITPMSVTPPLLELEDAESRRARRVRADDPELVVEVPKRPPADDA*
Ga0137379_102689442	3300012209	Vadose Zone Soil	MFEIGTIMSYRGRLHVVVGSTPMSVTPPVLELEDTESARIRRVRGDDPQLVVEATKRLQADDE*
Ga0137379_109620451	3300012209	Vadose Zone Soil	MFEIGTIISYRGRFHVVIGITPMSVTPPLLELEDTESGRIRRVQGDDPQLVVEATKRLPADDE*
Ga0137378_102309861	3300012210	Vadose Zone Soil	VAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPRKRLPADDE*
Ga0137378_104360401	3300012210	Vadose Zone Soil	MFKIGTIVSYRGCLHVVVGTTPISVTPALLELEDTDSGRTRRVRRDDPQLVVETTKRLPADDE*
Ga0137378_112737001	3300012210	Vadose Zone Soil	VALFEIGTIVSYQGRLYVVLGVTPMSVRFVLHEPEATENGSIRRVRVDDSELVVGVTKRPPADDA*
Ga0137378_114226962	3300012210	Vadose Zone Soil	MFTIGTIVSYRGRLHVVVGITPMSVTPALLELEHGESGHIRRVRADDPQLVVETTKRLPADDD*
Ga0137378_117262381	3300012210	Vadose Zone Soil	AVDSLLAHTPVLMPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRADDAELVVGVTKRPPADDA*
Ga0137377_101313531	3300012211	Vadose Zone Soil	VAVLEIGTIVSYRGRLYVVVGITPMSVTPPLLELEDAESRRARRVRADDPELVVEVPKRPPADDAR*
Ga0137387_101846874	3300012349	Vadose Zone Soil	RVAVAVLEIGTIVSYRGRLYVVVGITPMSVTPPLLELEDAESRRARRVRADDAELVVGVTKRPPADDA*
Ga0137372_107706311	3300012350	Vadose Zone Soil	VAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVGPTKRLPADDE*
Ga0137369_103232221	3300012355	Vadose Zone Soil	VFATVFEIGTIVSYRGRLHVVVCITPMSVTPPLVELEDIESGRIRRVRADDPQLVVEATRRLPADDE*
Ga0137369_111274511	3300012355	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRENDAELVV
Ga0137371_106771491	3300012356	Vadose Zone Soil	VAVFEIGTIIRYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPRKRL
Ga0137371_110516311	3300012356	Vadose Zone Soil	VAVFEIGTIISYRGRFHVVIGITPMSVTPPLLELEDTESGRIRRVQGDDPQLVVEATKRLPADDE*
Ga0137384_104941081	3300012357	Vadose Zone Soil	IIRYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPRKRLPADDE*
Ga0137368_105209451	3300012358	Vadose Zone Soil	SGRFLTCARVGRVFATVFEIGTIVSYRGRLHVVVCITPMSVTPPLVELEDIESGRIRRVRADDPQLVVEATRRLPADDE*
Ga0137385_103012992	3300012359	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRVDDADLVVGVTKRPPADDV*
Ga0137375_106890351	3300012360	Vadose Zone Soil	IGTIVSYRGRLHVVVCITPMSVTPPLVELEDTESGRIRRVRGDDPQLVVEATKRLPADDE
Ga0137361_104574962	3300012362	Vadose Zone Soil	MPVALFEIGTIVGYQGRLYVVLGATPMSVTPALLEVEDTENGSIRRVRADDAELVVGVTKRPPADDA*
Ga0137404_100233098	3300012929	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRADDAELVVGVTKRPPADDV*
Ga0137407_114720752	3300012930	Vadose Zone Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0137407_122036191	3300012930	Vadose Zone Soil	MPVARLEIGTNVRYQGRLYVVLGITPISVTPPLLELEDTENGGTRPVRADDPELVVEVTKRPPPDGA*
Ga0164303_106535131	3300012957	Soil	VALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADDA*
Ga0134076_103037161	3300012976	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRADDAELVVGVTKRPP
Ga0164309_119445102	3300012984	Soil	AADEAVDSLLAHLCALPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA*
Ga0164304_116037081	3300012986	Soil	MPVAPFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADD
Ga0157372_103001252	3300013307	Corn Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKTPPADDA*
Ga0120155_10918161	3300013768	Permafrost	MFEIGTIISYRGRLQVVVGITPMSVTPPLLELEDTESGRIRRVLGGDPRLVVEPKKRLPADDE*
Ga0182008_107546282	3300014497	Rhizosphere	VALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPANDA*
Ga0134072_103246962	3300015357	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRVDDAELVVGVTKRPPADDV*
Ga0134074_11810641	3300017657	Grasslands Soil	VSVAVFEIGTIISYRGRLHVVVGITPMSVTPPLLELEEIESGRIRRVRGDDPQLVVEETKRLPADDE
Ga0163161_102864841	3300017792	Switchgrass Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTFALLELEATENGSTRRVRADDPELVVGVTKRPPADDA
Ga0190266_106853372	3300017965	Soil	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRHPADDA
Ga0184605_100228934	3300018027	Groundwater Sediment	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0184619_101343611	3300018061	Groundwater Sediment	YQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDARSR
Ga0066667_103447121	3300018433	Grasslands Soil	MPVAPLEIGTIVNYQGRLYVVFGTTPMSVTPPLLELEDTENGDTRRVRADDPELVVEVTKRPPADDA
Ga0193695_11093261	3300021418	Soil	MPVALFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDTENGSIGRVRADDAELVVRVTKRPPAKDA
Ga0224452_12018893	3300022534	Groundwater Sediment	VALFEIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPRADDA
Ga0222622_100211513	3300022756	Groundwater Sediment	MPVALFEIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPRADDA
Ga0207647_103446061	3300025904	Corn Rhizosphere	MPVALFEIGTIVSYKGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDS
Ga0207684_105955093	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTIVSYKGRLFVVLGVTPMSVTPALLEVEDTENGSIRRVRADEAELVVGVTKRPPADDA
Ga0207693_1000439916	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTIVSYKGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0207663_103224383	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRIPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0207662_111905281	3300025918	Switchgrass Rhizosphere	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDS
Ga0207646_100136817	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPVALFEIGTIVSYQGRLYVVLGGTPMSVTPALLEVEDTENGSIRRVRADEAELVVGVTKRPPADDA
Ga0207690_113344972	3300025932	Corn Rhizosphere	TPVRMPVALFEIGTIVSYKGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0207709_116174471	3300025935	Miscanthus Rhizosphere	EIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRQVRADDPELVVGVTKRPPADD
Ga0209350_11296361	3300026277	Grasslands Soil	IVSYQGRLYVVLGVTPMSVTPALLELEDAENGSTRRVRADDAELVVGVTKRPPADDA
Ga0209238_11910101	3300026301	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDAENGNTRRVRADDAELVVGVTKRPPADDA
Ga0209239_100112413	3300026310	Grasslands Soil	MPVARFEIGTIVSYQGRLYVVLGVTPMSVTPALVELEDAENGSTRRVRADDAELVVGVTKRPPADDA
Ga0179587_109984621	3300026557	Vadose Zone Soil	MPVARLEIGTIVRYQGRLYVVLGITPMRVTPPLLKLEDTENGGTRPVRADDRELVVEVTKRPPPDGA
Ga0208475_10139451	3300027018	Soil	VALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPANDA
Ga0209590_100437343	3300027882	Vadose Zone Soil	VAVFEIGTIIRYRGRLHVVVGITPMSVTPPLLELEDTESGRIRRVRGDDPQLVVEPTKRLPADDE
Ga0268265_120136531	3300028380	Switchgrass Rhizosphere	EIGTIVSYQGRLFVILGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADD
Ga0307322_100666532	3300028710	Soil	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDARSR
Ga0307293_100074094	3300028711	Soil	VALFEIGTIVSYQGRLYVVLGVTPMSVTPALLELEDTETGSTRRVRADDAELVVGVMKRPPADDA
Ga0307298_100913133	3300028717	Soil	EIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPRADD
Ga0307315_102041101	3300028721	Soil	ALFEIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVRADDPELVVAVTKRPPADDA
Ga0307306_101561531	3300028782	Soil	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVAVTKRPPADDA
Ga0307299_100762183	3300028793	Soil	MPVALFEIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0307287_101370121	3300028796	Soil	ADEAVDSLRAHTPVRIPVALFEIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPRADDA
Ga0307292_101470581	3300028811	Soil	MPVALFEIGTIVSYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPR
Ga0307278_105304832	3300028878	Soil	RVGRVSVAVFEIGTIISYRGRLHVVVGVTPMGVTPTLLELEDTQSGRIRRVRGDDPQLAVEPTKRLPADDE
Ga0307300_101039962	3300028880	Soil	MPVALFEIGTIVSYHGRLFVVIGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRPPADDA
Ga0307277_100056028	3300028881	Soil	SYQGRLFVVLGVTPMSVTPALLELEDTENGSTRRVRADDPELVVGVTKRHPADDA
Ga0307308_102295013	3300028884	Soil	EIGTIVSYQGRLFVVIGVTPMSVTPALLELEDTENGSTRRVKADDPELVVGVTKRPRADD
Ga0310813_106342811	3300031716	Soil	VRIPVALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPANDA
Ga0310811_104550411	3300033475	Soil	SGRLLTCAHTPVRIPVALFEIGTIVSYQGRLYVVLGVTPMSVRPAVLELEDTENGSIRRVRVDDSELVVGVTKRPPANDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences