Metagenome / Metatranscriptome Family F072183

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072183
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	47 residues
Representative Sequence	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHK
Number of Associated Samples	111
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.17 %
% of genes from short scaffolds (< 2000 bps)	89.26 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.512 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.397 % of family members)
Environment Ontology (ENVO)	Unclassified (30.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.33% β-sheet: 0.00% Coil/Unstructured: 41.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03466	LysR_substrate	37.19
PF07681	DoxX	7.44
PF00248	Aldo_ket_red	3.31
PF02436	PYC_OADA	2.48
PF04248	NTP_transf_9	2.48
PF13343	SBP_bac_6	2.48
PF07883	Cupin_2	1.65
PF04224	DUF417	1.65
PF00596	Aldolase_II	0.83
PF02900	LigB	0.83
PF13486	Dehalogenase	0.83
PF08669	GCV_T_C	0.83
PF13453	zf-TFIIB	0.83
PF12681	Glyoxalase_2	0.83
PF00903	Glyoxalase	0.83
PF14686	fn3_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	7.44
COG4270	Uncharacterized membrane protein	Function unknown [S]	7.44
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	2.48
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	1.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.51 %
Unclassified	root	N/A	21.49 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.63 %
Unclassified	root	N/A	21.49 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.65 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	42.98 %
Unclassified	root	N/A	21.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	42.98 %
Unclassified	root	N/A	21.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.48 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.83 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	42.98 %
Unclassified	root	N/A	21.49 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	2.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.83 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	42.98 %
Unclassified	root	N/A	21.49 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2.48 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.65 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.83 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01C790G	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300000789\|JGI1027J11758_12798479	Not Available	1072	Open in IMG/M
3300001139\|JGI10220J13317_10014109	Not Available	838	Open in IMG/M
3300004022\|Ga0055432_10098547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	765	Open in IMG/M
3300004050\|Ga0055491_10181838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300004058\|Ga0055498_10132773	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300004463\|Ga0063356_101797851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	920	Open in IMG/M
3300004778\|Ga0062383_10142647	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300004779\|Ga0062380_10378025	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005174\|Ga0066680_10042763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	2629	Open in IMG/M
3300005179\|Ga0066684_11129559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005180\|Ga0066685_10158816	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005186\|Ga0066676_10970816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300005332\|Ga0066388_103977556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300005333\|Ga0070677_10275939	Not Available	845	Open in IMG/M
3300005339\|Ga0070660_100153374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1853	Open in IMG/M
3300005366\|Ga0070659_100570183	Not Available	970	Open in IMG/M
3300005458\|Ga0070681_11348399	Not Available	636	Open in IMG/M
3300005536\|Ga0070697_101974601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300005545\|Ga0070695_101115662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300005549\|Ga0070704_100208322	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1583	Open in IMG/M
3300005558\|Ga0066698_10145659	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300005615\|Ga0070702_100090397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1856	Open in IMG/M
3300005616\|Ga0068852_100957272	Not Available	874	Open in IMG/M
3300005718\|Ga0068866_11254483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300005764\|Ga0066903_101398224	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300005842\|Ga0068858_102238374	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005890\|Ga0075285_1032863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	656	Open in IMG/M
3300005895\|Ga0075277_1030834	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006794\|Ga0066658_10503713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300006804\|Ga0079221_11742344	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300006844\|Ga0075428_100853050	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300006845\|Ga0075421_100480260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1480	Open in IMG/M
3300006847\|Ga0075431_100065763	All Organisms → cellular organisms → Bacteria	3743	Open in IMG/M
3300006847\|Ga0075431_100918173	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300006871\|Ga0075434_100052934	All Organisms → cellular organisms → Bacteria	4034	Open in IMG/M
3300006903\|Ga0075426_10357052	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300006954\|Ga0079219_10033314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2060	Open in IMG/M
3300006969\|Ga0075419_10674333	Not Available	731	Open in IMG/M
3300007076\|Ga0075435_100492294	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300007076\|Ga0075435_100651947	Not Available	914	Open in IMG/M
3300009094\|Ga0111539_10148408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2745	Open in IMG/M
3300009094\|Ga0111539_11690867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300009101\|Ga0105247_11626687	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300009162\|Ga0075423_10179443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2223	Open in IMG/M
3300009162\|Ga0075423_11393200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300009162\|Ga0075423_13139670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300009174\|Ga0105241_11637411	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300009691\|Ga0114944_1121452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1009	Open in IMG/M
3300010036\|Ga0126305_10807185	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300010336\|Ga0134071_10683190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300010361\|Ga0126378_10514602	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300010366\|Ga0126379_10681148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1121	Open in IMG/M
3300010403\|Ga0134123_10045278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3284	Open in IMG/M
3300010868\|Ga0124844_1156982	Not Available	857	Open in IMG/M
3300012198\|Ga0137364_10869216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300012198\|Ga0137364_11005055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300012207\|Ga0137381_11364465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300012228\|Ga0137459_1057027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1113	Open in IMG/M
3300012582\|Ga0137358_10849914	Not Available	602	Open in IMG/M
3300012922\|Ga0137394_10516245	Not Available	1014	Open in IMG/M
3300012924\|Ga0137413_10099180	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1812	Open in IMG/M
3300012925\|Ga0137419_10802474	Not Available	770	Open in IMG/M
3300012957\|Ga0164303_11143069	Not Available	565	Open in IMG/M
3300013306\|Ga0163162_10123399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2695	Open in IMG/M
3300014254\|Ga0075312_1012798	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300014314\|Ga0075316_1064802	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300015242\|Ga0137412_10152630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1862	Open in IMG/M
3300015372\|Ga0132256_101980555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300015372\|Ga0132256_103806134	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	507	Open in IMG/M
3300015373\|Ga0132257_101085721	Not Available	1010	Open in IMG/M
3300015374\|Ga0132255_102455557	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300016270\|Ga0182036_11839273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300018031\|Ga0184634_10497921	Not Available	544	Open in IMG/M
3300018056\|Ga0184623_10233458	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300018063\|Ga0184637_10269354	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300018063\|Ga0184637_10538346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300018476\|Ga0190274_10353474	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300018920\|Ga0190273_10646730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300019361\|Ga0173482_10123177	Not Available	974	Open in IMG/M
3300019362\|Ga0173479_10286791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	743	Open in IMG/M
3300021081\|Ga0210379_10016304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2774	Open in IMG/M
3300021081\|Ga0210379_10102254	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300021090\|Ga0210377_10585594	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300021332\|Ga0210339_1521050	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300022534\|Ga0224452_1254356	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300022756\|Ga0222622_10291031	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300025315\|Ga0207697_10014429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3276	Open in IMG/M
3300025893\|Ga0207682_10325366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	722	Open in IMG/M
3300025912\|Ga0207707_10142258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2097	Open in IMG/M
3300025917\|Ga0207660_10800119	Not Available	769	Open in IMG/M
3300025933\|Ga0207706_10741343	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300025935\|Ga0207709_10437382	Not Available	1008	Open in IMG/M
3300025949\|Ga0207667_12154461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	515	Open in IMG/M
3300025961\|Ga0207712_10552898	Not Available	990	Open in IMG/M
3300026089\|Ga0207648_10556883	Not Available	1054	Open in IMG/M
3300026324\|Ga0209470_1375645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	508	Open in IMG/M
3300026535\|Ga0256867_10323174	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026540\|Ga0209376_1374668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300027614\|Ga0209970_1090740	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300027843\|Ga0209798_10112685	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300027843\|Ga0209798_10420897	Not Available	621	Open in IMG/M
3300027909\|Ga0209382_10362143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1622	Open in IMG/M
3300027915\|Ga0209069_10914393	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300028536\|Ga0137415_11181364	Not Available	580	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1097239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	636	Open in IMG/M
3300031716\|Ga0310813_10153471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1855	Open in IMG/M
3300031820\|Ga0307473_10952715	Not Available	623	Open in IMG/M
3300031911\|Ga0307412_10032645	All Organisms → cellular organisms → Bacteria	3302	Open in IMG/M
3300031962\|Ga0307479_11437035	Not Available	648	Open in IMG/M
3300031965\|Ga0326597_11483811	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300031995\|Ga0307409_100659283	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300032001\|Ga0306922_11587575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	651	Open in IMG/M
3300032075\|Ga0310890_11159323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300032076\|Ga0306924_10964025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300032783\|Ga0335079_10569710	Not Available	1198	Open in IMG/M
3300033412\|Ga0310810_10532461	Not Available	1155	Open in IMG/M
3300033475\|Ga0310811_10236855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2179	Open in IMG/M
3300033481\|Ga0316600_11092418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300034164\|Ga0364940_0253204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300034690\|Ga0364923_0198155	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	32.23%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.41%
Plants	Host-Associated → Plants	32.23%
Aquatic	Environmental → Aquatic	16.53%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Sediment	Environmental → Aquatic → Sediment	6.61%
Freshwater	Environmental → Aquatic → Freshwater	5.79%
Marine	Environmental → Aquatic → Marine	3.31%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.36%
Loam	Environmental → Terrestrial → Soil → Loam	8.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.83%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.48%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.65%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.65%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.83%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.83%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005890	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021332	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.384 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_00827210	2170459017	Switchgrass, Maize And Mischanthus Litter	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVGRAPWVK
JGI1027J11758_127984791	3300000789	Soil	MEVKSTKEVHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKL
JGI10220J13317_100141091	3300001139	Soil	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDAR
Ga0055432_100985471	3300004022	Natural And Restored Wetlands	MEVKSIKERHTELMMHSVKFAKDEQGRRKGQDVLFKWPDI
Ga0055491_101818381	3300004050	Natural And Restored Wetlands	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQLGEHKHIYVVDARL
Ga0055498_101327731	3300004058	Natural And Restored Wetlands	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQ
Ga0063356_1017978512	3300004463	Arabidopsis Thaliana Rhizosphere	MLKHEGGSMDVKSVKETHTELMMHSVRFAKDEQGRRKGQDVLFKWRDV
Ga0062383_101426471	3300004778	Wetland Sediment	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQEILFKWPDIEKQLGEHKHIYVVDA
Ga0062380_103780252	3300004779	Wetland Sediment	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPDIEKQLGEHKHIY
Ga0066680_100427633	3300005174	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQK
Ga0066684_111295591	3300005179	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLGEHKHIYVV
Ga0066685_101588161	3300005180	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKL
Ga0066676_109708161	3300005186	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLG
Ga0066388_1039775561	3300005332	Tropical Forest Soil	MDVKSVKEVHTELMMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHI
Ga0070677_102759391	3300005333	Miscanthus Rhizosphere	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKQLG
Ga0070660_1001533741	3300005339	Corn Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEI
Ga0070659_1005701832	3300005366	Corn Rhizosphere	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEK
Ga0070681_113483991	3300005458	Corn Rhizosphere	MEVKSIKERHTELLMHSVRFAKDEQGRRKGQEVLFKWPDIEKQL
Ga0070697_1019746012	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKSVKERHTELMMHSVKFAKDEQGRRQGQEILFKWPDIE
Ga0070695_1011156621	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPDIEKQLGEHKH
Ga0070704_1002083221	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKSTQELHTELMMHSVRFAKDEQGRRKGQEVLFKWPDIEK
Ga0066698_101456591	3300005558	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPE
Ga0070702_1000903971	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKL
Ga0068852_1009572722	3300005616	Corn Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKQLGEHK
Ga0068866_112544831	3300005718	Miscanthus Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKK
Ga0066903_1013982242	3300005764	Tropical Forest Soil	MDVKSVKEVHTELMMHSVRFAKDEQGRRKGQDVLFKWPE
Ga0068858_1022383742	3300005842	Switchgrass Rhizosphere	MEVKSTQELHTELMMHSVRFAKDEQGRRKGQEVLFKWPDIEKKLGEHKHIYV
Ga0075285_10328632	3300005890	Rice Paddy Soil	MEVKSTRELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDARL
Ga0075277_10308342	3300005895	Rice Paddy Soil	MEVKSTRELHSELAMHSVRFAKDEQGRRKGQEVLFKWPEIEKKLGEHKH
Ga0066658_105037132	3300006794	Soil	MKQEQRSVKEVHNELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLGEHKHI
Ga0079221_117423441	3300006804	Agricultural Soil	MEVKSIKETHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGE
Ga0075428_1008530501	3300006844	Populus Rhizosphere	MEVKSVKERNTELMMHSVKLAKDEQARRKGQEILFKWPD
Ga0075421_1004802601	3300006845	Populus Rhizosphere	MEVKSIKERNTELMMHSVKFAKDEQARRKGQEILFK
Ga0075431_1000657636	3300006847	Populus Rhizosphere	MDVKSVKETHTELMMHSVRFAKDEQGRRKGQDVLFKW
Ga0075431_1009181731	3300006847	Populus Rhizosphere	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPDIEKQLGEHKHIYVVDARLGS
Ga0075434_1000529346	3300006871	Populus Rhizosphere	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKQLGEHKHIYVVDARLGSN
Ga0075426_103570522	3300006903	Populus Rhizosphere	MELKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKQLGEHKHIYVVDAR
Ga0079219_100333141	3300006954	Agricultural Soil	MEVKSIKETHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKH
Ga0075419_106743331	3300006969	Populus Rhizosphere	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKW
Ga0075435_1004922943	3300007076	Populus Rhizosphere	MEQRSVKEVHSELGMHSVRFAKEEQGRRKQQQVLFKWPEVEKKLGEHKHIYVVDARLGSN
Ga0075435_1006519472	3300007076	Populus Rhizosphere	MEVKSIKERHTELTMHSVKFAKDEQGRRKGQEILFKWP
Ga0111539_101484084	3300009094	Populus Rhizosphere	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKH
Ga0111539_116908671	3300009094	Populus Rhizosphere	MEVKSVKEVHTDLLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVV
Ga0105247_116266871	3300009101	Switchgrass Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVD
Ga0075423_101794434	3300009162	Populus Rhizosphere	MEVKSIKERHTELTMHSVKFAKDEQGRRKGQEILFKWPDIEKQLG
Ga0075423_113932001	3300009162	Populus Rhizosphere	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPDIEKQ
Ga0075423_131396701	3300009162	Populus Rhizosphere	MEVKSVKERHTELAMHSVKFAKDEQGRRKGQEILFKWPDIEKQL
Ga0105241_116374111	3300009174	Corn Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGE
Ga0114944_11214521	3300009691	Thermal Springs	MEQRSTKELHGELGMHSVRFAKEEQGRRKEQQVLFKWPEIQKKLGEHKHI
Ga0126305_108071852	3300010036	Serpentine Soil	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQLGEHKHIYVVDAR
Ga0134071_106831903	3300010336	Grasslands Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKW
Ga0126378_105146024	3300010361	Tropical Forest Soil	MEQRSVKEIHSELGMHSVRFAKEEQGRRKQQQVLFKWPEVEKKLGE
Ga0126379_106811482	3300010366	Tropical Forest Soil	MEQKSIKEVHTELMMHSVKFAKDEQGRRKQQQVLFKWAEVEKKLGEHKHIYVVDAR
Ga0134123_100452781	3300010403	Terrestrial Soil	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEH
Ga0124844_11569822	3300010868	Tropical Forest Soil	MGFMDVKSVKEVHTELMMHSVRFAKDEQGRRKSQDVLFKWPEIEKKLGEHKHIY
Ga0137364_108692162	3300012198	Vadose Zone Soil	MKQEPRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLGE
Ga0137364_110050552	3300012198	Vadose Zone Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLGE
Ga0137381_113644652	3300012207	Vadose Zone Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRKEQQVLFKWPEVQKKLGEHKH
Ga0137459_10570273	3300012228	Soil	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPDI
Ga0137358_108499142	3300012582	Vadose Zone Soil	MEVKSIKERHTELMMHSVKFAKDEQGRRKGQEILF
Ga0137394_105162453	3300012922	Vadose Zone Soil	MEVKSIKERHTELTMHSVKFAKDEQGRRKGQEILFKWPDIEKQL
Ga0137413_100991801	3300012924	Vadose Zone Soil	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDARL
Ga0137419_108024742	3300012925	Vadose Zone Soil	MEVKSIKERHTELTMHSVKFAKDEQGRRKGQEILFKWPDIEKQLGEHKHIYVVD
Ga0164303_111430691	3300012957	Soil	MEVKSTKEVHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLG
Ga0163162_101233994	3300013306	Switchgrass Rhizosphere	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLF
Ga0075312_10127981	3300014254	Natural And Restored Wetlands	MEVKSTRELHSELAMHSVRFAKDEQGRRKGQEVLFKW
Ga0075316_10648022	3300014314	Natural And Restored Wetlands	MEVKSTRELHSELAMHSVRFAKDEQGRRKGQEVLFKWL
Ga0137412_101526301	3300015242	Vadose Zone Soil	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLREHKHIYVVDAR
Ga0132256_1019805551	3300015372	Arabidopsis Rhizosphere	MEVKSVKEVHTDLLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIY
Ga0132256_1038061341	3300015372	Arabidopsis Rhizosphere	MEVKSIKETHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKL
Ga0132257_1010857213	3300015373	Arabidopsis Rhizosphere	MEVKSVKEVHTDLLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHK
Ga0132255_1024555571	3300015374	Arabidopsis Rhizosphere	MEVKSVKEVHTDLLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYV
Ga0182036_118392731	3300016270	Soil	MDVKSVKEVHTELMMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDARLGSN
Ga0184634_104979211	3300018031	Groundwater Sediment	MEVKSVKERNTELMMHSVKFAKEEQGRRKGQEVLFKWQDVEK
Ga0184623_102334581	3300018056	Groundwater Sediment	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFEWPDIEKQLGEHKHI
Ga0184637_102693542	3300018063	Groundwater Sediment	MDVKSTKEVHTELLMHSVKFAKDEQGRRKQQEVLFKWPDIEKKLGEHKHIYVVD
Ga0184637_105383461	3300018063	Groundwater Sediment	MEVKSVKERHTELMMHSVKFAKDEQGRRKGQEILFKWPDIE
Ga0190274_103534743	3300018476	Soil	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQLGEHKHIYVVDARLGSN
Ga0190273_106467302	3300018920	Soil	MEVKSIKETHTELMMHSVKFAKDEQGRRKGQEVLFKWPDI
Ga0173482_101231772	3300019361	Soil	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDARIGSN
Ga0173479_102867911	3300019362	Soil	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVV
Ga0210379_100163041	3300021081	Groundwater Sediment	MEVKSIKERNTELMMHSVKFAKDEQARRRGQEILF
Ga0210379_101022541	3300021081	Groundwater Sediment	MDVKATKQVHAELAMHSVRFAKDEQGRRKGQDVLFKWPDIEKQLGEHK
Ga0210377_105855941	3300021090	Groundwater Sediment	MDVKTTKQVHTELAMHSVRFAKDEQGRRKGQDVLFKWPDIEKQLG
Ga0210339_15210502	3300021332	Estuarine	MEVKSIKETHTELMMHSVKFAKDEQGRRKGQEILFKWPDI
Ga0224452_12543561	3300022534	Groundwater Sediment	MEVKSVKERHSELAMHSVKFAKDEQGRRKGQEILFKWPDIEKQLGEHKHIYVV
Ga0222622_102910312	3300022756	Groundwater Sediment	MEVKSTQELHTELMMHSVRFAKDEQGRRKGQEVLFKWPDIEKKLGEH
Ga0207697_100144294	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHK
Ga0207682_103253661	3300025893	Miscanthus Rhizosphere	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKH
Ga0207707_101422583	3300025912	Corn Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKW
Ga0207660_108001191	3300025917	Corn Rhizosphere	MEVKSIKERHTELLMHSVRFAKDEQGRRKGQEVLFKWPDIEKQLGEHKHIYVVDARLG
Ga0207706_107413432	3300025933	Corn Rhizosphere	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVD
Ga0207709_104373821	3300025935	Miscanthus Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEK
Ga0207667_121544611	3300025949	Corn Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDARL
Ga0207712_105528981	3300025961	Switchgrass Rhizosphere	VEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIY
Ga0207648_105568831	3300026089	Miscanthus Rhizosphere	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIY
Ga0209470_13756451	3300026324	Soil	MEVKSVKERHTELMMHSVKFAKDEQGRRKGQEILFKWPDIEKQLGEHKHIYV
Ga0256867_103231741	3300026535	Soil	MDVKATKQVHAELAMHSVRFAKDEQGRRKGQDVLFKWPDIEKQLGEHKHIYVVD
Ga0209376_13746681	3300026540	Soil	MKQEQRSVKEVHSELGMHSVRFAKDEQGRRREQQVLFKWPEVQKKLGEHKH
Ga0209970_10907401	3300027614	Arabidopsis Thaliana Rhizosphere	MEVKSTKELHSELTMHSVRFAKDEQGRRKGQDVLFKWSEIEKKLGEHKHIYVVDA
Ga0209798_101126851	3300027843	Wetland Sediment	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQDVLFKWQEVEKQLGEHGHIYVVDK
Ga0209798_104208971	3300027843	Wetland Sediment	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQEILFKWPDIEKQLGEHKHIYVVDARL
Ga0209382_103621433	3300027909	Populus Rhizosphere	MEVKSVKERNTELMMHSVKFAKDEQARRKGQEILFKWPD
Ga0209069_109143932	3300027915	Watersheds	MEVKSIKEKHTELMMQSVKFAKDEQSRRKGQEVLFKWPDIEKQLGEQTRP
Ga0137415_111813642	3300028536	Vadose Zone Soil	MEVKSTKELHSELAMHSVRFAKDEQGRRKGQDVLFKWPEIETQ
(restricted) Ga0255311_10972392	3300031150	Sandy Soil	MEVKSVKETHTELMMHSVRFAKDEQGRRKGQEVLFKWRDVEKQLGEHKHIYVVDARLGSN
Ga0310813_101534711	3300031716	Soil	MEVKSIKETHTELLMHSVRFAKDEQGRRKGQDVLFKWPEI
Ga0307473_109527151	3300031820	Hardwood Forest Soil	MEQRSVKEVHSELGMHSVRFAKEEQGRRKQQQVLFKWPEVEKKLGEHKHIYVVDAR
Ga0307412_100326455	3300031911	Rhizosphere	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKW
Ga0307479_114370351	3300031962	Hardwood Forest Soil	MEQRSVKEVHSELGMHSVRFAKEEQGRRKQQQVLFK
Ga0326597_114838112	3300031965	Soil	MDVKTTKQVHTELAMHSVRFAKDEQGRRKGQDVLFKWPDIEKQLGEHKHIYV
Ga0307409_1006592833	3300031995	Rhizosphere	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQLGEHK
Ga0306922_115875752	3300032001	Soil	MDVKSVKEVHTELMMHSVRFAKDEQGRRKGQDVLFKWPEVEKKL
Ga0310890_111593231	3300032075	Soil	MEVKSVKEVHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKHIYVVDA
Ga0306924_109640252	3300032076	Soil	MEQKSTKEVHSELGMHSVRFAKEEQGRRKQQQVLFKWPEVQKKL
Ga0335079_105697101	3300032783	Soil	MEQKSIKEVHTELMMHSVKFAKDEQGRRKQQQVLFKWAEVE
Ga0310810_105324613	3300033412	Soil	MEVKSVKEVHTDLLMHSVRFAKDEQGRRKGQDVLFKWPEIEKKLGEHKH
Ga0310811_102368552	3300033475	Soil	MEVKSIKETHTELLMHSVRFAKDEQGRRKGQDVLFKWPEIE
Ga0316600_110924183	3300033481	Soil	MEVKSIKETHTELMMQSVKFAKDEQGRRKGQAILFKWPEIEKQLGEHKHIYV
Ga0364940_0253204_1_168	3300034164	Sediment	MDVKSTKEVHTELLMHSVKFAKDEQGRRKQQEVLFKWPEIEKKLGEHKHIYVVDAR
Ga0364923_0198155_376_537	3300034690	Sediment	MDVKTTKEVHTELAMHSVRFAKDEQGRRKGQDVLFKWPDIEKQLGEHKHIYVVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters