Metagenome / Metatranscriptome Family F072166

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	60 residues
Representative Sequence	MCASKIGSTLGVGEGVGDGDGVGLGVGEATATVALALGDGELTAGCPHAASNTTATSKTRAITL
Number of Associated Samples	96
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	11.57 %
% of genes near scaffold ends (potentially truncated)	17.36 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.578 % of family members)
Environment Ontology (ENVO)	Unclassified (41.322 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01510	Amidase_2	61.16
PF00730	HhH-GPD	4.13
PF04909	Amidohydro_2	3.31
PF00083	Sugar_tr	2.48
PF02069	Metallothio_Pro	1.65
PF00211	Guanylate_cyc	0.83
PF00589	Phage_integrase	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	4.13
COG0177	Endonuclease III	Replication, recombination and repair [L]	4.13
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	4.13
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	4.13
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	4.13
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.65 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	66.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	66.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	66.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005166\|Ga0066674_10016624	All Organisms → cellular organisms → Bacteria	3127	Open in IMG/M
3300005167\|Ga0066672_10531947	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005171\|Ga0066677_10027006	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300005174\|Ga0066680_10397345	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005174\|Ga0066680_10625715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300005178\|Ga0066688_10672974	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300005181\|Ga0066678_10714290	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005184\|Ga0066671_10062929	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300005187\|Ga0066675_10418523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	991	Open in IMG/M
3300005343\|Ga0070687_100343668	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005445\|Ga0070708_100130158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2328	Open in IMG/M
3300005445\|Ga0070708_101633722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300005446\|Ga0066686_10059568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2358	Open in IMG/M
3300005446\|Ga0066686_10933566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300005468\|Ga0070707_102049433	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005536\|Ga0070697_100349507	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005553\|Ga0066695_10080237	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300005555\|Ga0066692_10524566	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300005558\|Ga0066698_10070882	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300005559\|Ga0066700_10077864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2121	Open in IMG/M
3300005560\|Ga0066670_10076606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1814	Open in IMG/M
3300005561\|Ga0066699_10594973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	794	Open in IMG/M
3300005566\|Ga0066693_10502642	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005576\|Ga0066708_10262207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1100	Open in IMG/M
3300005586\|Ga0066691_10391637	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005598\|Ga0066706_10405846	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300006049\|Ga0075417_10091283	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300006796\|Ga0066665_10153046	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300006852\|Ga0075433_10201167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1771	Open in IMG/M
3300006854\|Ga0075425_100923084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	998	Open in IMG/M
3300007258\|Ga0099793_10653899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300009012\|Ga0066710_102226102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300009012\|Ga0066710_102272418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	789	Open in IMG/M
3300009038\|Ga0099829_10075937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2560	Open in IMG/M
3300009088\|Ga0099830_11231567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300009089\|Ga0099828_10425732	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300009090\|Ga0099827_10696988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300009090\|Ga0099827_11207379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300009137\|Ga0066709_100181752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2738	Open in IMG/M
3300009137\|Ga0066709_100340800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2055	Open in IMG/M
3300009137\|Ga0066709_100645350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1515	Open in IMG/M
3300009137\|Ga0066709_102542116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	689	Open in IMG/M
3300009147\|Ga0114129_10585416	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300009147\|Ga0114129_11233380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300009147\|Ga0114129_12793978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300009162\|Ga0075423_10039049	All Organisms → cellular organisms → Bacteria	4849	Open in IMG/M
3300009162\|Ga0075423_11591398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300010303\|Ga0134082_10039253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1801	Open in IMG/M
3300010329\|Ga0134111_10142141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	945	Open in IMG/M
3300010333\|Ga0134080_10503482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300010373\|Ga0134128_11207643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	834	Open in IMG/M
3300011401\|Ga0153984_1117107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300012189\|Ga0137388_10719619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300012198\|Ga0137364_10010357	All Organisms → cellular organisms → Bacteria	5296	Open in IMG/M
3300012198\|Ga0137364_10125850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1831	Open in IMG/M
3300012199\|Ga0137383_10363060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1061	Open in IMG/M
3300012200\|Ga0137382_10865814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300012203\|Ga0137399_10203767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1607	Open in IMG/M
3300012203\|Ga0137399_10204628	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300012206\|Ga0137380_11290640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300012207\|Ga0137381_10220419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1646	Open in IMG/M
3300012207\|Ga0137381_11391262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300012208\|Ga0137376_10003836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9516	Open in IMG/M
3300012208\|Ga0137376_10336189	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300012208\|Ga0137376_10698547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	875	Open in IMG/M
3300012210\|Ga0137378_10555198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300012285\|Ga0137370_10483943	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300012349\|Ga0137387_10486530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	896	Open in IMG/M
3300012356\|Ga0137371_10939254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300012363\|Ga0137390_10635440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1033	Open in IMG/M
3300012363\|Ga0137390_11065429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300012918\|Ga0137396_10305220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1177	Open in IMG/M
3300012918\|Ga0137396_11162397	Not Available	547	Open in IMG/M
3300012922\|Ga0137394_10042576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3727	Open in IMG/M
3300012922\|Ga0137394_10348186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1265	Open in IMG/M
3300012923\|Ga0137359_10992581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300012923\|Ga0137359_11649184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300012925\|Ga0137419_10066694	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300012927\|Ga0137416_10433905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1120	Open in IMG/M
3300012927\|Ga0137416_11251473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300012972\|Ga0134077_10591552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300012977\|Ga0134087_10011301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3090	Open in IMG/M
3300014166\|Ga0134079_10044777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1536	Open in IMG/M
3300015241\|Ga0137418_10061047	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300015241\|Ga0137418_10975430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300015357\|Ga0134072_10464872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300017657\|Ga0134074_1110676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	947	Open in IMG/M
3300018027\|Ga0184605_10069952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1519	Open in IMG/M
3300018028\|Ga0184608_10000325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	12392	Open in IMG/M
3300018061\|Ga0184619_10245677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	823	Open in IMG/M
3300018431\|Ga0066655_11039192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300018433\|Ga0066667_10063736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2295	Open in IMG/M
3300018433\|Ga0066667_10368735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1149	Open in IMG/M
3300019279\|Ga0184642_1550349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	669	Open in IMG/M
3300021344\|Ga0193719_10451617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300025922\|Ga0207646_10339939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1356	Open in IMG/M
3300026300\|Ga0209027_1097601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1056	Open in IMG/M
3300026305\|Ga0209688_1032728	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300026307\|Ga0209469_1155614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300026309\|Ga0209055_1061080	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300026315\|Ga0209686_1082705	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300026324\|Ga0209470_1030915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2751	Open in IMG/M
3300026327\|Ga0209266_1298821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300026523\|Ga0209808_1043461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2092	Open in IMG/M
3300026530\|Ga0209807_1059699	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300026536\|Ga0209058_1071903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1851	Open in IMG/M
3300026538\|Ga0209056_10020027	All Organisms → cellular organisms → Bacteria	6555	Open in IMG/M
3300026538\|Ga0209056_10377026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	902	Open in IMG/M
3300027748\|Ga0209689_1018530	All Organisms → cellular organisms → Bacteria	4361	Open in IMG/M
3300027873\|Ga0209814_10064390	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300027875\|Ga0209283_10290793	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300028715\|Ga0307313_10209980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	605	Open in IMG/M
3300028768\|Ga0307280_10288726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300028771\|Ga0307320_10070387	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300028784\|Ga0307282_10592942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300028807\|Ga0307305_10434906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300028824\|Ga0307310_10134841	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300028824\|Ga0307310_10248512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300028828\|Ga0307312_10141662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1520	Open in IMG/M
3300031421\|Ga0308194_10071368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	939	Open in IMG/M
3300031720\|Ga0307469_12300837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.74%
Host-Associated	Host-Associated	8.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.43%
Plants	Host-Associated → Plants	7.44%
Aquatic	Environmental → Aquatic	3.31%
Fungi	Host-Associated → Fungi	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.44%
Sediment	Environmental → Aquatic → Sediment	2.48%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Mycelium	Host-Associated → Fungi → Mycelium	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.44%
Loam	Environmental → Terrestrial → Soil → Loam	6.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066674_100166244	3300005166	Soil	MGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL*
Ga0066672_105319472	3300005167	Soil	MCASKIGSTLGVGEGVGDGEAVGDGDAVAATVVIGLGDGEPTAACPHAVSNTSTTSNPRAITS*
Ga0066677_100270063	3300005171	Soil	MGRTLGVGEAVGEGEGVGLGDGDAAAATVAVGLGDVETVAGCPHAASNTSATSKTRAITL
Ga0066680_103973451	3300005174	Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATAIVAVAVGDGELTAACPHAASNTTATTNTRAITL*
Ga0066680_106257151	3300005174	Soil	VGEGVGEGDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTNATSKSRTITL*
Ga0066688_106729742	3300005178	Soil	MGRTLGVGEAVGEGEGVGLGDGDAAAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0066678_107142901	3300005181	Soil	MCASKIGSTLGVGEGVGEGDWVGLGEGEAAATVAVGLGDGEPIAGPPHAASNTNTTSNPRAITL*
Ga0066671_100629293	3300005184	Soil	MGRTLGVGEAVGEGEGVGLGDGDAAAATVAVGLGDVETVAGCPHAASNTSATSKTRAITV
Ga0066675_104185232	3300005187	Soil	MGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTS
Ga0070687_1003436682	3300005343	Switchgrass Rhizosphere	VGEGVGDGDGVGVGLGVGEATATVAVALGDGELAAGCPHEASNTTATSNTRAITL*
Ga0070708_1001301582	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MCASKIGRIVGVGEADGVGLGVGDATASVVVALGDGELTAGCPHAASNTRATSNTRAITL
Ga0070708_1016337222	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MWASKIGRIVGVGEADGVGLGVGDPTATVAVALGDGELTAGCPHAAVNTRATSNTRLITL
Ga0066686_100595684	3300005446	Soil	MWASKIGSTLGVGEGVGEGDGVGLGVGDATATVAVALGDGEPAAGCPHAASNTTATSKSRTITL*
Ga0066686_109335662	3300005446	Soil	VGEGVGEGDGVGLGDGEATAIVAVAVGDGELTAACPHAASNTTATTNTRAITL*
Ga0070707_1020494332	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MCASKIGRTLGVGEGVGEGEAVGLGDAGGIVGVALGDGEPTAACPHAASNTTATSNRRAITL*
Ga0070697_1003495071	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ASKIGRTLGVGDGVGEGDGVGLDDGEATATVALGDGEVAAGRAHAASNTRATTSPRAITL
Ga0066695_100802373	3300005553	Soil	VGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATMNTRAITL*
Ga0066692_105245661	3300005555	Soil	GVGEGVGEGDGVGLGEGEAAATVAVGDGEPTAGPAHAASNTNTTSNPRAITL*
Ga0066698_100708824	3300005558	Soil	MCASKIGSTLGVGEGVGAGDGVGLGDGEATVTVAVALGDGELSAGPPHAASNTSATSNPRAITL*
Ga0066700_100778642	3300005559	Soil	MGRTLGVGEAVGEGEGMGLGDGDAAAATVAVGLGDVETVAGCPHAASNTSATSKTRAITV
Ga0066670_100766063	3300005560	Soil	MCASNMGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL*
Ga0066699_105949732	3300005561	Soil	MGRTLGVGEAVGEGEGVGLGDGDAAAATVAVGLGNVETATGCPHAASNTSATSKTRAITL
Ga0066693_105026422	3300005566	Soil	MCASKIGRIVGVGEGVGEGDGVGLGVGDAIAIVLAVGDGGSTAGRAHAASNTIATSNMRAITL*
Ga0066708_102622072	3300005576	Soil	MCASKIGNTLGVGEGVGEGVGVGLGDGDVTATVGLGDSETAAGCPHAASNTSATSKTRAITL*
Ga0066691_103916372	3300005586	Soil	MCASKIGRTLGVGEGVGDGETVGDGDAVAVTVVVGLGDGEPTAACPHAVSNTSTTSNPRAITS*
Ga0066706_104058462	3300005598	Soil	MCASNMGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTRPTSKTRAITL*
Ga0075417_100912833	3300006049	Populus Rhizosphere	LGVGEGVGEGDRLGLGDGEATATVALGVGETAAGPPHAASNRSATSKMRAIPL*
Ga0066665_101530463	3300006796	Soil	VGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATTNTRAITL*
Ga0075433_102011674	3300006852	Populus Rhizosphere	AVGEGDGVGLDVGDATASVAVALGDDKRTAGCPHAARKASATSNTRAIAL*
Ga0075425_1009230841	3300006854	Populus Rhizosphere	MCASKIGSTLGVGEGVGDGVGLGDGEATTATVGLGDGETAAGCPHAASNTSATSKPRAITF*
Ga0099793_106538992	3300007258	Vadose Zone Soil	MCASKIGRTLGVGEGVGDGETVGDGDAVAVTVVVGLGDGEPTAGRPHAPSNTSATSNALTITL*
Ga0066710_1022261021	3300009012	Grasslands Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATMNTRAITL
Ga0066710_1022724182	3300009012	Grasslands Soil	MCASKIGSTLGVGEGVGEGDWVELGEGEAAATVAVGLGDGEPTAGPPHAASNTNTTSNPRAITL
Ga0099829_100759373	3300009038	Vadose Zone Soil	MCASKIGRIVGVGEAVGEGDGVGLGVGDATASVAVALGDGELTAGCPHAASNTRAVSNTRAITL*
Ga0099830_112315672	3300009088	Vadose Zone Soil	MCASKIGRIVGVGEAVGEGDGVGLGVGDATARVAVALGDGELTAGCPHAASNTRAVSNTRAITL*
Ga0099828_104257322	3300009089	Vadose Zone Soil	MCASKIGSTLGVGEGVGEGDVVGVGDGEATATVAVGDGELAAGRAQAASNTRATSSPRAITL*
Ga0099827_106969882	3300009090	Vadose Zone Soil	MCASKIGSTIGVGEGVGDSDAVGLGDGEATASVAVALGLGKPTAGRPHALSNTSATKSTRTITL*
Ga0099827_112073792	3300009090	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATTNTRAITL*
Ga0066709_1001817524	3300009137	Grasslands Soil	MCASKIGNTLGVGEGVGEGAVVGVGDGDVTAAVGLGDGETAAGCPHAASNTSATSKTRAITL*
Ga0066709_1003408001	3300009137	Grasslands Soil	MCASKIGNTLGVGEGVGDGVGLGVGEATATVALALGDGELTAGCPHAASNTTATSKTRAITL*
Ga0066709_1006453503	3300009137	Grasslands Soil	MWASKIGSTLGVGEGVGEGDGVRLAVGEATATVAVALGDGEPAAGCPHAASNTNATSKSRTITL*
Ga0066709_1025421162	3300009137	Grasslands Soil	MCASKIGSTLGVGEGVGAGDGVGLGDGEATVTVAVALGDGELSAGPPHAASNTSATSNPRAITF*
Ga0114129_105854162	3300009147	Populus Rhizosphere	MCASKIGRTLGVGEGVGEGDGLGLGDGEATATVALGVGETAAGPPHAASNRSATSKMRAIPL*
Ga0114129_112333802	3300009147	Populus Rhizosphere	MCASKIGRTLGVGEGVGEGDGDGLGLGDGEATATVALGVGETAAGPPHAASNR
Ga0114129_127939782	3300009147	Populus Rhizosphere	MCASKIGRIVGVGEAVGEGDGVGLDVGDATASVAVALGDDKRTAGCPHAARKASATSNTRAIAL*
Ga0075423_100390493	3300009162	Populus Rhizosphere	MCASKIGRIVGVGEAVGEGDGVGLGVGDATASVAVALGDDKRTVGCPHAARKASATSNTRAIAL*
Ga0075423_115913982	3300009162	Populus Rhizosphere	MCASKIGRTLGVGEGVGEGDGLGLGDSEATATVALALGVGETAAGPPHAASNRSATSKMRAIPL*
Ga0134082_100392534	3300010303	Grasslands Soil	MGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCAHAASNTSATSKTRAITL*
Ga0134111_101421411	3300010329	Grasslands Soil	IGRTLGVGEGVGEGDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTNATSKSRTITL*
Ga0134080_105034822	3300010333	Grasslands Soil	ICASKIGRTLGVGEGVGEGDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTNATSKSRTITL*
Ga0134128_112076432	3300010373	Terrestrial Soil	MCASKIGRIVGVGEGVGDGDGVGLGVGVGEATATVAVALRDGELATGCPQAASNTAATSNTRAITL*
Ga0153984_11171072	3300011401	Attine Ant Fungus Gardens	VGEGEGVGLGLGLGEATARVAVGLGDGEATAGPPHAASNTTATSRGRTITL*
Ga0137388_107196192	3300012189	Vadose Zone Soil	MCASNIGRIVGVGEGVGDGVGIGLGVGEAAATVAGAVADGELTAGCPHAASNTTATSKTRPITL*
Ga0137364_100103575	3300012198	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGVGDAIATVAVGVGDGEPTAACPHAASNTTATSNTRAITL*
Ga0137364_101258502	3300012198	Vadose Zone Soil	VGEGVGEGDGVGLRLGEETATVAMALGDGELTAGRAHAASNTNTTSKTRTITL*
Ga0137383_103630602	3300012199	Vadose Zone Soil	MWASKIGSTLGVGEGVGEGDGVGLALGEATATVAVALGDGEPAAGCPHAASNTNATSKSRTITL*
Ga0137382_108658142	3300012200	Vadose Zone Soil	MCASKIGSTLGVGEGVGDGDGVGLGVGEATATVALALGDGELTAGCPHAASNTTATSKTRAITL*
Ga0137399_102037672	3300012203	Vadose Zone Soil	MCASKIGSTLGVGEGVGDGEAVGVGDGDGTIATVVAGLGDGEPTAACPHAVSNTSTTSKPRAITS*
Ga0137399_102046282	3300012203	Vadose Zone Soil	MCASKIGSTLGVGEGVGEGDGVGLGDGEATATVAVAFGDGEPTAGRPHAASNTSATRNARAITL*
Ga0137380_112906402	3300012206	Vadose Zone Soil	MCASKIGRIVGVGEAVGEGDGVGLDAGDATASVAVALGDDELTAGCPHAASNTSATGNKRAITL*
Ga0137381_102204192	3300012207	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGDGELTAACPHAASNTTATTNTRAITL*
Ga0137381_113912621	3300012207	Vadose Zone Soil	MCASKIGRIVGVGEGVGDGDGVGLGVGDVTATVALAVGDDEVTAGCPHAASTTTATTNTRAITL*
Ga0137376_1000383610	3300012208	Vadose Zone Soil	VGEGDGVGLRLGEETATVAMALGDGELTAGRAHAASNTNTTSKTRTITL*
Ga0137376_103361892	3300012208	Vadose Zone Soil	MCASKIGRIVGVGEGVGDGDGVGLGDGEATATVAVAVGGGELTADCPHAASNTTATTNTRAITL*
Ga0137376_106985472	3300012208	Vadose Zone Soil	MCASKIGSTLGVGEGIGEGDGVGLGDGETTATVAVGEGELAGGRAHAASNTRATSSTRTITL*
Ga0137378_105551982	3300012210	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATMNTRAITL*
Ga0137370_104839432	3300012285	Vadose Zone Soil	VGEGVGEGDGVGLRVGEETATVAMALGDGELTAGRAHAASNTNTTSKTRTITL*
Ga0137387_104865302	3300012349	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGGGELTADCPHAASNTTATTNTRAITL*
Ga0137371_109392542	3300012356	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDSDATATVAVAVGDGELTADCPHAASNTTATTNTRAITL*
Ga0137390_106354401	3300012363	Vadose Zone Soil	MCASKIGRIVGVGEAVGEGDGVGLGVGEATASVAVAVGDDGLTAGCPHAASNTSATSNTRAITL*
Ga0137390_110654291	3300012363	Vadose Zone Soil	MCASKIGRTLGVGERVAVGDAVGLGDGGGIVGVALGDGEPTAAWPHAASNTTATSNTRAITL*
Ga0137396_103052202	3300012918	Vadose Zone Soil	MCASKIGRIVGVGEGVGSGEAVGVGDGEAAATVEVELGDGELTADCPHAVSNTRTTSNPRAITS*
Ga0137396_111623971	3300012918	Vadose Zone Soil	MCASKIVKTLGVGEGVSEGDGIGLGDGEATATVAVALGDGELTAGPPHAASNTNATSNTRAITL*
Ga0137394_100425765	3300012922	Vadose Zone Soil	MCASKIGSTLGVGEGVGDGDGVGLGVGEATATVALALGDGEFTAGCPHAASNTSATSTMRAITL*
Ga0137394_103481861	3300012922	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGEGVGLGVGEATATVALGLGDGEFTAGCPHAVSNTSATSTMRAITL*
Ga0137359_109925812	3300012923	Vadose Zone Soil	MCASKIGSTLGVGEGVGEGDGVGLGDGETTATVAVGEGELAAGRAHPASNTSATSSTRAITL*
Ga0137359_116491842	3300012923	Vadose Zone Soil	MCASKIGRIVGVGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATTNARAITL*
Ga0137419_100666942	3300012925	Vadose Zone Soil	MCASKIGRIVGVGEGVGSGEAVGVGDGEAAATVEVELGDGELTAACPHAVSNTRTTSNPRAITS*
Ga0137416_104339052	3300012927	Vadose Zone Soil	IVGVGEGVGSGEAVGVGDGEAAATVEVGLGDGELTAACPHAVSNTRTTSNPRAITS*
Ga0137416_112514732	3300012927	Vadose Zone Soil	MCASKIGSTLGVGEGVGEGDGVGGDGETTATVAVGEGELAAGRAHPASNTRATSSARAITL*
Ga0134077_105915522	3300012972	Grasslands Soil	VGKGVGEGGCVGLGDGDATVALALGDGETTAGAPHAASNTTATSNTRAITL*
Ga0134087_100113011	3300012977	Grasslands Soil	VGEGVGEDDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTSATSKTRAIT
Ga0134079_100447772	3300014166	Grasslands Soil	MCASNMGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSTSKTRAITL*
Ga0137418_100610472	3300015241	Vadose Zone Soil	MCASKIGRIVGVGEGVGAGEAVGVGDGEAAATVEVELGDGELTAACPHAVSNTRTTSNPRAITS*
Ga0137418_109754302	3300015241	Vadose Zone Soil	MCASKIGSTLGVGEGVGEGDGVGLGDGETTATVAVGEGELAAGRAHPASNTRATSSARAITL*
Ga0134072_104648722	3300015357	Grasslands Soil	MCASKIGRIVGVGEGLGEGDGVGLGVGDAFATVAVGVGDGEPTAACPHAASNTTATSNTRAITL*
Ga0134074_11106762	3300017657	Grasslands Soil	MWASKIGSTLGVGEGVGEGDGVGLGVGDATATVAVALGDGEPAAGCPHAASNTTATSKSRTITL
Ga0184605_100699522	3300018027	Groundwater Sediment	MGRIVGVGEGVGDGDGVGLGVGEATATVAVGLGEGELTAGCPHAASNTSATSNTRAITL
Ga0184608_100003256	3300018028	Groundwater Sediment	VGEGVGDGDGVGLGVGEATATVAVGLGDGELTAGCPHAASNASATSNTRAITL
Ga0184619_102456772	3300018061	Groundwater Sediment	MGRIVGVGEGVGDGEGVGLGVGEAIATVAVAVGDGELTAGCPHAASNTSATSNTRAITL
Ga0066655_110391922	3300018431	Grasslands Soil	MGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0066667_100637364	3300018433	Grasslands Soil	MGRTLGVGEAVGEGEGVGLGDGEAAAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0066667_103687352	3300018433	Grasslands Soil	VGEGVGEGDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTNATSKSRTITL
Ga0184642_15503491	3300019279	Groundwater Sediment	MCASKMGRIVGVGEGVGEGDAVGLGVGEAAATVAVAVGDGELTAGCPHAASNTSATSNTRAITL
Ga0193719_104516172	3300021344	Soil	MCASKIGRIVGVGEGVGDGDGVGLGVGEAAASVADAVGEGAVTAGCPHAASNTSATSNKRPITL
Ga0207646_103399392	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCASKIGRTLGVGEGVGEGEAVGLGDAGGIVGVALGDGEPTAACPHAASNTTATSNRRAITL
Ga0209027_10976011	3300026300	Grasslands Soil	ASKIGSTLGVGEGVGEGEGVGIGLDVGDAIAIVVAVGDGESTAGRAHAASNTIATSNMRAITL
Ga0209688_10327282	3300026305	Soil	MCASNMGKTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0209469_11556142	3300026307	Soil	GVGEGVGEGDGVGLGVGDATATVAVALGDGEPAAGCPHAASNTTATSKSRTITL
Ga0209055_10610802	3300026309	Soil	MGRTLGVGEAVGEGEGAGLGDGDAAAATVAVGLGDVETVAGCPHAASNTSATSKTRAITL
Ga0209686_10827052	3300026315	Soil	MGRTLGVGEAVGEGEGAGLGDGDAAAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0209470_10309152	3300026324	Soil	VGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATMNTRAITL
Ga0209266_12988211	3300026327	Soil	VGEGVGEGDGVGLGDGEATATVAVAVGDGELTADCPHAASNTTATMN
Ga0209808_10434611	3300026523	Soil	KIGNTLGVGEGVGEGAVVGLGDGDVTAAVGLGDGETAAGCPHAASNTSATSKTRAITL
Ga0209807_10596992	3300026530	Soil	MGRTLGVGEAVGEGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0209058_10719032	3300026536	Soil	MGRTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0209056_100200275	3300026538	Soil	VGEDVGEGDGVGLGVDEATATVAVTLGDGETAAGCPHAASNTNATSKSRTITL
Ga0209056_103770262	3300026538	Soil	MWASNMGNTLGVGEAVGEGVGLGDGDATAATVAVGLGDVETAAGCPHAASNTSATSKTRAITL
Ga0209689_10185304	3300027748	Soil	MGRTLGVGEAVGEGEGAGLGDGDAAAATVAVGLGDVETVAGCPHAASNTSATSKTRAITV
Ga0209814_100643903	3300027873	Populus Rhizosphere	LGVGEGVGEGDRLGLGDGEATATVALGVGETAAGPPHAASNRSATSKMRAIPL
Ga0209283_102907932	3300027875	Vadose Zone Soil	VGEAVGEGDGVGLGVGDATASVAVALGDGELTAGCPHAASNTRAVSNTRAITL
Ga0307313_102099802	3300028715	Soil	VGEGVGDGDGVGLGVGEAAASVADAVGEGAVTAGCPHAASNTSATSNKRPI
Ga0307280_102887261	3300028768	Soil	MGRIVGVGEGVGEGDGVGLGVADAIATVAVGVGDGELTAGCPHAASNTTATSNTRAITL
Ga0307320_100703871	3300028771	Soil	MCASKIGSTLGVGEGVGEGDGVGLAVGEATATVGVALGDGEVTAGCPHAASNTTATIRARAITL
Ga0307282_105929422	3300028784	Soil	MCASKIGTIVGVGEGVGDGDGVGLGVGEAAASVADAVGEGAVTAGCPHAASNTSATSNKRPITL
Ga0307305_104349061	3300028807	Soil	MCASKIGRIVGVGEGVGEGDGVGLGVGDAIATVAVGVGDGEPTAGCPHAASNTTATSNTRAITL
Ga0307310_101348412	3300028824	Soil	MGRIVGVGEGVGDGDGVGLGVGDAIARVAVAVGDGELTAGCPHAASNTSATTNTRPITL
Ga0307310_102485121	3300028824	Soil	KIGRIVGVGEGVGSGEAVGVGDGETTASVAVGLGDGEVTAGRPHAASNTSATSKPRAITS
Ga0307312_101416623	3300028828	Soil	MCASKIGRIVGVGEGIGDGDGVGLGVGEAAASVADAVGEGAVTAGCPHAASNTSATSNKRPITL
Ga0308194_100713682	3300031421	Soil	RIVGVGEGVGEGDGVGLGVGDTIATVAVGVGDGEPTAGCPHAASNTTATSNTRALTL
Ga0307469_123008371	3300031720	Hardwood Forest Soil	KIGSTLGVGEGVGEGDGVGLGDGETTATVAVGDGELAAGGAQAASNTRATSSARAITL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences