Metagenome Family F072155

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072155
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	81 residues
Representative Sequence	MICTRCGQREANTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR
Number of Associated Samples	92
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.12 %
% of genes near scaffold ends (potentially truncated)	22.31 %
% of genes from short scaffolds (< 2000 bps)	83.47 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (39.669 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.38% β-sheet: 0.00% Coil/Unstructured: 50.62%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01872	RibD_C	4.13
PF14534	DUF4440	4.13
PF13783	DUF4177	1.65
PF02311	AraC_binding	1.65
PF03992	ABM	1.65
PF13649	Methyltransf_25	1.65
PF12867	DinB_2	1.65
PF02517	Rce1-like	0.83
PF07831	PYNP_C	0.83
PF13683	rve_3	0.83
PF08241	Methyltransf_11	0.83
PF12697	Abhydrolase_6	0.83
PF02861	Clp_N	0.83
PF02899	Phage_int_SAM_1	0.83
PF12710	HAD	0.83
PF01527	HTH_Tnp_1	0.83
PF01906	YbjQ_1	0.83
PF11225	DUF3024	0.83
PF04892	VanZ	0.83
PF00144	Beta-lactamase	0.83
PF06271	RDD	0.83
PF00589	Phage_integrase	0.83
PF04191	PEMT	0.83
PF00903	Glyoxalase	0.83
PF02472	ExbD	0.83
PF14539	DUF4442	0.83
PF11954	DUF3471	0.83
PF12680	SnoaL_2	0.83
PF05866	RusA	0.83
PF00190	Cupin_1	0.83
PF04255	DUF433	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	4.13
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	4.13
COG0213	Thymidine phosphorylase	Nucleotide transport and metabolism [F]	0.83
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.83
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.83
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.83
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.83
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.83
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.83
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.83
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.83
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.83
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.83
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.20 %
Unclassified	root	N/A	42.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.31 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.31 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.83 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.31 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.65 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.83 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Candidatus Aenigmarchaeota	phylum	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.79 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3.31 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.48 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.83 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.83 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.83 %
unclassified Aenigmarchaeota	no rank	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota	0.83 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.96 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	3.31 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.48 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	1.65 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.83 %
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gemmatimonadetes bacterium 13_1_20CM_69_28	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.96 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	3.31 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.48 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	1.65 %
Sulfurovaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gemmatimonadetes bacterium 13_1_20CM_69_28	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.96 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	3.31 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	2.48 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1.65 %
Sulfurovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gemmatimonadetes bacterium 13_1_20CM_69_28	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.96 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	3.31 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2.48 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1.65 %
unclassified Sulfurovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gemmatimonadetes bacterium 13_1_20CM_69_28	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.96 %
Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	3.31 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2.48 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1.65 %
Sulfurovum sp. XGS-02	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum → Sulfurovum sp. XGS-02	0.83 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.83 %
Candidatus Aenigmarchaeota archaeon CG1_02_38_14	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	0.83 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.83 %
Gemmatimonadetes bacterium 13_1_20CM_69_28	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	0.83 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.83 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10006801	All Organisms → cellular organisms → Bacteria	4037	Open in IMG/M
3300002561\|JGI25384J37096_10082398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1160	Open in IMG/M
3300002561\|JGI25384J37096_10123829	Not Available	862	Open in IMG/M
3300002562\|JGI25382J37095_10074843	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300002908\|JGI25382J43887_10390855	Not Available	587	Open in IMG/M
3300002909\|JGI25388J43891_1019584	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300002911\|JGI25390J43892_10160652	Not Available	525	Open in IMG/M
3300004463\|Ga0063356_101293750	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1066	Open in IMG/M
3300004780\|Ga0062378_10140876	Not Available	631	Open in IMG/M
3300004808\|Ga0062381_10440375	Not Available	507	Open in IMG/M
3300005166\|Ga0066674_10122574	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300005166\|Ga0066674_10159342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1067	Open in IMG/M
3300005172\|Ga0066683_10125584	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300005180\|Ga0066685_10235479	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005446\|Ga0066686_10044577	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Aenigmarchaeota → unclassified Aenigmarchaeota → Candidatus Aenigmarchaeota archaeon CG1_02_38_14	2678	Open in IMG/M
3300005546\|Ga0070696_101486304	Not Available	579	Open in IMG/M
3300005553\|Ga0066695_10084314	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	1933	Open in IMG/M
3300005553\|Ga0066695_10505896	Not Available	742	Open in IMG/M
3300005553\|Ga0066695_10787454	Not Available	550	Open in IMG/M
3300005556\|Ga0066707_10220673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	1229	Open in IMG/M
3300005556\|Ga0066707_10240154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1180	Open in IMG/M
3300005556\|Ga0066707_10328781	Not Available	1000	Open in IMG/M
3300005557\|Ga0066704_10064116	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300005561\|Ga0066699_10061662	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300005568\|Ga0066703_10078002	Not Available	1911	Open in IMG/M
3300005569\|Ga0066705_10488154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_20CM_69_28	772	Open in IMG/M
3300006034\|Ga0066656_10420643	Not Available	867	Open in IMG/M
3300006034\|Ga0066656_11003899	Not Available	535	Open in IMG/M
3300006049\|Ga0075417_10674532	Not Available	530	Open in IMG/M
3300006796\|Ga0066665_10748333	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300006796\|Ga0066665_11684152	Not Available	502	Open in IMG/M
3300006800\|Ga0066660_10570729	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300006852\|Ga0075433_10107945	All Organisms → cellular organisms → Bacteria	2468	Open in IMG/M
3300006871\|Ga0075434_102489971	Not Available	519	Open in IMG/M
3300007255\|Ga0099791_10399439	Not Available	662	Open in IMG/M
3300007258\|Ga0099793_10015742	All Organisms → cellular organisms → Bacteria	3023	Open in IMG/M
3300007258\|Ga0099793_10101802	Not Available	1330	Open in IMG/M
3300007258\|Ga0099793_10169883	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300009012\|Ga0066710_101038676	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300009012\|Ga0066710_101249379	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	1151	Open in IMG/M
3300009012\|Ga0066710_101390801	Not Available	1088	Open in IMG/M
3300009012\|Ga0066710_104260678	Not Available	534	Open in IMG/M
3300009137\|Ga0066709_103300732	Not Available	587	Open in IMG/M
3300009147\|Ga0114129_12901069	Not Available	567	Open in IMG/M
3300009162\|Ga0075423_10503814	Not Available	1273	Open in IMG/M
3300010301\|Ga0134070_10013068	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300010329\|Ga0134111_10070173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300010329\|Ga0134111_10109891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1064	Open in IMG/M
3300010329\|Ga0134111_10574001	Not Available	503	Open in IMG/M
3300010391\|Ga0136847_11799638	All Organisms → cellular organisms → Bacteria	1950	Open in IMG/M
3300010400\|Ga0134122_10245759	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1509	Open in IMG/M
3300011429\|Ga0137455_1078535	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300011438\|Ga0137451_1210161	Not Available	616	Open in IMG/M
3300012096\|Ga0137389_10024298	All Organisms → cellular organisms → Bacteria	4309	Open in IMG/M
3300012189\|Ga0137388_10008969	All Organisms → cellular organisms → Bacteria	6952	Open in IMG/M
3300012198\|Ga0137364_10121925	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300012198\|Ga0137364_10457159	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300012199\|Ga0137383_10443927	Not Available	950	Open in IMG/M
3300012201\|Ga0137365_10037530	All Organisms → cellular organisms → Bacteria	3702	Open in IMG/M
3300012201\|Ga0137365_10311520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1165	Open in IMG/M
3300012201\|Ga0137365_11011663	Not Available	602	Open in IMG/M
3300012201\|Ga0137365_11268985	Not Available	524	Open in IMG/M
3300012203\|Ga0137399_10312909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1299	Open in IMG/M
3300012203\|Ga0137399_10384745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1169	Open in IMG/M
3300012203\|Ga0137399_10405093	Not Available	1138	Open in IMG/M
3300012204\|Ga0137374_10386430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1117	Open in IMG/M
3300012204\|Ga0137374_10399078	Not Available	1094	Open in IMG/M
3300012204\|Ga0137374_10688730	Not Available	769	Open in IMG/M
3300012206\|Ga0137380_10024359	All Organisms → cellular organisms → Bacteria	5571	Open in IMG/M
3300012207\|Ga0137381_11561048	Not Available	551	Open in IMG/M
3300012208\|Ga0137376_10199930	Not Available	1729	Open in IMG/M
3300012208\|Ga0137376_10662187	Not Available	901	Open in IMG/M
3300012208\|Ga0137376_11159414	Not Available	661	Open in IMG/M
3300012208\|Ga0137376_11516359	Not Available	561	Open in IMG/M
3300012211\|Ga0137377_10068623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3316	Open in IMG/M
3300012285\|Ga0137370_10226902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1102	Open in IMG/M
3300012349\|Ga0137387_10103827	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300012349\|Ga0137387_10988906	Not Available	604	Open in IMG/M
3300012350\|Ga0137372_10459943	Not Available	953	Open in IMG/M
3300012353\|Ga0137367_10263883	Not Available	1237	Open in IMG/M
3300012354\|Ga0137366_10099346	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Sulfurovaceae → Sulfurovum → unclassified Sulfurovum → Sulfurovum sp. XGS-02	2206	Open in IMG/M
3300012356\|Ga0137371_10142685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1877	Open in IMG/M
3300012359\|Ga0137385_11662580	Not Available	502	Open in IMG/M
3300012360\|Ga0137375_10708000	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012362\|Ga0137361_10127748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2248	Open in IMG/M
3300012362\|Ga0137361_10659186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	957	Open in IMG/M
3300012532\|Ga0137373_10978629	Not Available	614	Open in IMG/M
3300012685\|Ga0137397_10193773	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300012922\|Ga0137394_11441827	Not Available	548	Open in IMG/M
3300012925\|Ga0137419_10932260	Not Available	716	Open in IMG/M
3300012927\|Ga0137416_11977513	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012930\|Ga0137407_10251737	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300012976\|Ga0134076_10391346	Not Available	618	Open in IMG/M
3300015054\|Ga0137420_1212447	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300015264\|Ga0137403_10915252	Not Available	726	Open in IMG/M
3300017654\|Ga0134069_1267343	Not Available	598	Open in IMG/M
3300017657\|Ga0134074_1188170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	730	Open in IMG/M
3300018028\|Ga0184608_10161896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	969	Open in IMG/M
3300018056\|Ga0184623_10120374	Not Available	1215	Open in IMG/M
3300018059\|Ga0184615_10679562	Not Available	526	Open in IMG/M
3300018071\|Ga0184618_10000596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	8443	Open in IMG/M
3300018071\|Ga0184618_10005366	All Organisms → cellular organisms → Bacteria	3569	Open in IMG/M
3300018084\|Ga0184629_10196380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1041	Open in IMG/M
3300018433\|Ga0066667_10370074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1147	Open in IMG/M
3300018468\|Ga0066662_10252477	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300018482\|Ga0066669_10458043	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_4_67_11	1096	Open in IMG/M
3300019883\|Ga0193725_1007711	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300020003\|Ga0193739_1019908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1748	Open in IMG/M
3300020170\|Ga0179594_10282649	Not Available	628	Open in IMG/M
3300026277\|Ga0209350_1048497	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300026301\|Ga0209238_1001236	All Organisms → cellular organisms → Bacteria	9826	Open in IMG/M
3300026306\|Ga0209468_1002787	All Organisms → cellular organisms → Bacteria	7168	Open in IMG/M
3300026320\|Ga0209131_1183746	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300026343\|Ga0209159_1134582	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300026532\|Ga0209160_1166001	Not Available	970	Open in IMG/M
3300026538\|Ga0209056_10316850	Not Available	1059	Open in IMG/M
3300027655\|Ga0209388_1154077	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	649	Open in IMG/M
3300028536\|Ga0137415_10048138	All Organisms → cellular organisms → Bacteria	4144	Open in IMG/M
3300032180\|Ga0307471_101286748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300034165\|Ga0364942_0250933	Not Available	578	Open in IMG/M
3300034177\|Ga0364932_0367221	Not Available	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.04%
Host-Associated	Host-Associated	4.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.95%
Aquatic	Environmental → Aquatic	9.09%
Plants	Host-Associated → Plants	4.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.30%
Sediment	Environmental → Aquatic → Sediment	6.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.13%
Freshwater	Environmental → Aquatic → Freshwater	2.48%
Floodplain	Environmental → Terrestrial → Floodplain	1.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.65%
Lake	Environmental → Aquatic → Freshwater → Lake	0.83%
Loam	Environmental → Terrestrial → Soil → Loam	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	39.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.13%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100068012	3300002558	Grasslands Soil	MATTIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDXAERKKAETIRRGRELLARPLEFIDRFVESLR*
JGI25384J37096_100823981	3300002561	Grasslands Soil	TIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR*
JGI25384J37096_101238292	3300002561	Grasslands Soil	MICTRCGRRKAYNEAEAAALVAKGSPALPVGVCFLCAWQDPALQPALREYAERKKAETIRRTRELLARPLEFIDRLVARF
JGI25382J37095_100748432	3300002562	Grasslands Soil	MATTIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR*
JGI25382J43887_103908551	3300002908	Grasslands Soil	CPLAQSPAMICTRCGRRKAYNEVEAAALAAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRGRELLARPLEFIDRLVERFR*
JGI25388J43891_10195842	3300002909	Grasslands Soil	MATTIPCTRCGKLMAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDXAERKKAETIRRGRELLARPLEFIDRFVESLR*
JGI25390J43892_101606521	3300002911	Grasslands Soil	MATTIPCTRCGKLTAHTEADYAAIAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLARPLEFI
Ga0063356_1012937503	3300004463	Arabidopsis Thaliana Rhizosphere	MICTRCGQRKANSEAEAAALVAKGGPVLPAGVCFPCAWNDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0062378_101408761	3300004780	Wetland Sediment	WGLVMICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWNDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0062381_104403751	3300004808	Wetland Sediment	MICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWNDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0066674_101225742	3300005166	Soil	MATTIPCTRCGKRTAYTEADYATLAAKGAPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLR*
Ga0066674_101593423	3300005166	Soil	MICRRCGQRKANTQAEAAALAAKGGPVLPAGVCFPCAWQDTSLQPALREYAERKKAETIRGAREFLARPLEFIDRLMDSLR*
Ga0066683_101255841	3300005172	Soil	MIDCTRCGQPEAHTEAECAALAAKGGPALPAGVCFPCAWKDPLLRPALREYAERKKAETIRRARELLARPLEFIDRLVDRLR*
Ga0066685_102354792	3300005180	Soil	MATTIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKVETIRRGRELLARPLEFIDRFVESLR*
Ga0066686_100445773	3300005446	Soil	MICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLRKYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0070696_1014863041	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MICTRCGRRKAYDEAEAAALVAKGGPALPVGVCFVCAWQDPALQPALREYTVRKKAETIRRARELLARPLEFIDRLVEKFR*
Ga0066695_100843143	3300005553	Soil	MATTIPCTRCGKRTAYTEADYVALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKTETICRARELLVRPLEFIDRFVESLW*
Ga0066695_105058961	3300005553	Soil	MIDCTRCGQPEAHTEAECAALAAKGGPALPAGVCFPCAWKDPLLRPALREYAERKKAETIRRARELLGRPLEFIDRLVDRLR*
Ga0066695_107874541	3300005553	Soil	MICTRCGQRKAYTETEAAALSAKGGPLLPVGVCFLCAWKDPALQPALRAYAERKKAETILRARELLARPLEFIDRLVESFR*
Ga0066707_102206732	3300005556	Soil	MATTIPCTRCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLW*
Ga0066707_102401541	3300005556	Soil	MATTIPCTRCGKLTAHTEADYAAIAAKGGPVLPGGVCFPCAWRDPALQPALREYAEREKAETIRRARELLARPLEFIDRFVESLR*
Ga0066707_103287813	3300005556	Soil	MICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLRKYAERKKAETIRRARVLLARPLEFIDRLVESFR*
Ga0066704_100641162	3300005557	Soil	MICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLRRYAERKKAETIRLARELLARPLEFIDRLVESFR*
Ga0066699_100616624	3300005561	Soil	VATTIPCTRCGELTAYTEADYAVLASQGGPVLPGGVCFPCAWRDPTLQPALREYAERKKAETIRRARELLAKPLEFIDRFVESLRY*
Ga0066703_100780025	3300005568	Soil	AALGAKGGPVLPAGVCFPCAWKDPALQPGLRRYAERKKAETIRLARELLARPLEFIDRLVESFR*
Ga0066705_104881542	3300005569	Soil	MATTIPCIRCGELTAYTEADYAVLAAKGGPVLPGGVCFPCAWRDPTLQPALREYAERKKAETIRRARELLAKPLEFIDRFVESLRC*
Ga0066656_104206431	3300006034	Soil	PKRLGMATTIPCTRCGKRTAYTEADYVALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKTETICRARELLVRPLEFIDRFVESLW*
Ga0066656_110038991	3300006034	Soil	MICTRCGQRKAYTETEAAALAGKGGPLLPVGVCFLCAWKDPALQPALRAYVERKKAETIRRARELLARPLEFIDRFVESFR*
Ga0075417_106745322	3300006049	Populus Rhizosphere	RCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWNDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESLR*
Ga0066665_107483331	3300006796	Soil	MATTIPCTRCGKLTAHTEADYAAIAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLARPLEFIDRFVESLR*
Ga0066665_116841521	3300006796	Soil	MTCTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWQDGALQPALREYAQRKKAETIRRARELLVRPLEFIDRLVERFR*
Ga0066660_105707292	3300006800	Soil	YAVLASQGGPVLPGGVCFPCAWRDPTLQLALREYAERKKAETIRRARELLAKPLEFIDRFVESLRY*
Ga0075433_101079452	3300006852	Populus Rhizosphere	MICTRCGRRKAYDEAEAAALVAKGGPALPVGVCFVCAWQDPTLQPALREYTVRKKAETIRRARELLARPLEFIDRLVERFR*
Ga0075434_1024899711	3300006871	Populus Rhizosphere	MICTRCGRRKAYDEAEAAALVAKGGPALPVGVCFVCAWQDPALQPALREYTVRKKAETIRRARELLARPLEFIDRLVERFR*
Ga0099791_103994392	3300007255	Vadose Zone Soil	ETEAAALSAKGGPLLPVGVCFLCAWQDPALQPALRAFAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0099793_100157421	3300007258	Vadose Zone Soil	TQLKRGPLGCPVAQSPAMICTRCGRRKAYNETEAAALVAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRARELVARPLEFIDRLVEKFR*
Ga0099793_101018023	3300007258	Vadose Zone Soil	MICTRCGHREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0099793_101698831	3300007258	Vadose Zone Soil	MSCTRCRQRKAYTEPEAAALAAKGGPVLPAGICFPCAWQDPTLQPALRAYADRKKAETIRRAREFLARPLECIDRLVESLR*
Ga0066710_1010386761	3300009012	Grasslands Soil	MICTRCGKRKAYTEAEAAALASKGGPVLPVGVCFLCAWQDPALQPELREYTQRKKAQTIRRARELLARPLELIDRLVGRFR
Ga0066710_1012493791	3300009012	Grasslands Soil	MATTIPCTRCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKTETICRARELLVRPLEFIDRFVESLW
Ga0066710_1013908012	3300009012	Grasslands Soil	CTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWQDGALQPALREYAQRKKAETIRRARELLARPLEFIDRLVERFR
Ga0066710_1042606781	3300009012	Grasslands Soil	MIDCTRCGQPKAHTEAECAALAAKGGPALPAGVCFACAWKDPLLQPALREYAERKKAETIRRARELLARPLEFIDRLVDRLG
Ga0066709_1033007321	3300009137	Grasslands Soil	MTCTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWQDGALQPALREYAQRKKAETIRRARELLARPLEFIDRLVERFR*
Ga0114129_129010691	3300009147	Populus Rhizosphere	MICTRCGQREAKSEAEAAALAAKGGPVLPAGVCLPCAWNDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESLR*
Ga0075423_105038142	3300009162	Populus Rhizosphere	MICTRCGRRKAYDEAEAAALVAKGGPALPVGVCFVCAWQDPTLQPALREYTVRKNTETIRRARELLARPLEFIDRLVERFR*
Ga0134070_100130684	3300010301	Grasslands Soil	MIDCTRCGQPKAHTEAECAALAAKGGPALPAGVCFACAWKDPLLRPALREYAERKKAETIRRARELLARPLEFIDRLVDRLR*
Ga0134111_100701733	3300010329	Grasslands Soil	MATTIPCTRCGKRTAYTEADYVALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLW*
Ga0134111_101098911	3300010329	Grasslands Soil	LVAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRARELVARPLEFIDRLVERFR*
Ga0134111_105740011	3300010329	Grasslands Soil	AAALAAKGGPVLPVGVCFPCAWRDGALQPALREYAQRKKAETIRRARELLVRPLEFIDRLVERFR*
Ga0136847_117996382	3300010391	Freshwater Sediment	MICTRCGSSKAHTEAECTALAAKGGPTLPPGICFRCAWEDPALQKALGEWAEHRKAETFRRARELLVRPLEFIDRLVDSLR*
Ga0134122_102457594	3300010400	Terrestrial Soil	RKAYDEAEAAALVAKGGPALPVGVCFVCAWQDPALQPALREYTVRKKAETIRRARELLARPLEFIDRLVEKFR*
Ga0137455_10785352	3300011429	Soil	MINCTRCGKPKAHTETECAALAAKGGPVLPAGVCFPCAWKDPLLQPALREYAERKKAETIRRARELLARPLEFIDRLVDSLR*
Ga0137451_12101611	3300011438	Soil	MINCMRCGQPKAHTEAECAALAAKGGPALPAGVCFPCAWKDPLLQPALKEYAERKKAETIRRARELLARPLEFIDRLVDSLR*
Ga0137389_100242987	3300012096	Vadose Zone Soil	MATTIPCTRCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALRDYAERKKAETIRRARELLARPLEFIDRFVESLQ*
Ga0137388_100089695	3300012189	Vadose Zone Soil	METTIPCTRCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALRDYAERKKAETIRRARELLARPLEFIDRFVESLQ*
Ga0137364_101219251	3300012198	Vadose Zone Soil	MATTIPCTRCGKRTAYTEADYATLAAKGAPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLW*
Ga0137364_104571592	3300012198	Vadose Zone Soil	SMIDCTRCGQPKAHTEAECAALAAKGGPALPAGVCFACAWKDPLLQPALREYAERKKAETIRRARELLARPLEFIDRLVDRLR*
Ga0137383_104439272	3300012199	Vadose Zone Soil	MICTRCGKRKAYTEAEAAALASKGGPVLPAGVCFLCAWQDPALQPELREYTQRKKAQTIRRARELLARPLELIDRLVERFR*
Ga0137365_100375304	3300012201	Vadose Zone Soil	MIDCTRCGQPKAHTEAECAALAAKGGPALPAGVCFACAWKDPLLQPALREYAERKKAETIRRARELLARPLEFIDRLVDRLR*
Ga0137365_103115202	3300012201	Vadose Zone Soil	MIDCTRCGQPKAHTEAECAALATKGGPALPAGVCFPCAWKDPLLRPALREYAERKKAETIRRARELLARPLEFIDRLVDRLR*
Ga0137365_110116632	3300012201	Vadose Zone Soil	AEAAALAAKGGPVLPVGVCFPCAWQDGALQPALREYAQRKKAETIRRARELLVRPLAFIDRLVERFR*
Ga0137365_112689851	3300012201	Vadose Zone Soil	MICTRCGHREAKTEAEAAALAAKGGPVLAAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0137399_103129091	3300012203	Vadose Zone Soil	MINCMRCSQPKAHTEAECAALAAKGGPALPTGVCFPCAWKDPLLQPALREYAERKKAETIGRARELLARP
Ga0137399_103847451	3300012203	Vadose Zone Soil	MICTRCGRRKAYNETEAAALVAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRARELVARPLEFIDRLVEKFR*
Ga0137399_104050933	3300012203	Vadose Zone Soil	MICTRCGKRKAYTEAKAAALASKGGPVLPVGVCFLCAWQDPALQPELREYTQRKKAQTIQRARELLARPLELIDRLVERFR*
Ga0137374_103864302	3300012204	Vadose Zone Soil	MINCMRCGQPKAHTEAECAALAAKAGPVLPAGVCFPCAWKDPLLQPALREYAERKKAETIRRARELLARPLESIDRLVDSLR*
Ga0137374_103990781	3300012204	Vadose Zone Soil	MICTRCGHREAKTEAEAGALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETMRRARELLARPLEFIDRLVESFR*
Ga0137374_106887301	3300012204	Vadose Zone Soil	MATTIPCTRCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPVLRDYAERKKAETIRRAREFLARPLEIIDRFVESFR*
Ga0137380_100243593	3300012206	Vadose Zone Soil	VAKGGPALPVGVCFVCAWQEPALQPALREYTERKKAETIRRTRELLARPLEFIDRLVERFR*
Ga0137381_115610481	3300012207	Vadose Zone Soil	MICTRCGKRKAYTEAEASALASKGGPVLPAGVCFLCAWQDPALQPELREYTQRKKAQTIRRARELLARPLELIDRLVERFR*
Ga0137376_101999303	3300012208	Vadose Zone Soil	MTCTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCVWRDGALQPALREYAQRKKAETIRRARELLVRPLEFIDRLVERFR*
Ga0137376_106621871	3300012208	Vadose Zone Soil	GKRKAYTEAEAAALASKGGPVLPAGVCFLCAWQDPALQPEFREYTQRKKAQTIRRARELLARPLELIDRLVERFR*
Ga0137376_111594142	3300012208	Vadose Zone Soil	MICTRCGQRKANAEAEAAALAAKGGPVLPAGVCFPCAWQDPTLQPGLREYAERKKAETIRRARDLLARPLEFIDRLVESFR*
Ga0137376_115163591	3300012208	Vadose Zone Soil	LVAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRTRELVARPLESIDRLVERFR*
Ga0137377_100686236	3300012211	Vadose Zone Soil	MTCTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWRDGALQPALREYAQRKKAETIRRARELLVRPLEFIDRLVERFR*
Ga0137370_102269022	3300012285	Vadose Zone Soil	MICTRCSRRKAYNEAEAAALVAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRARELVARPLEFIDRLVESFR*
Ga0137387_101038271	3300012349	Vadose Zone Soil	MICTRCGRRKAYNEAEAAALVAKGGPALPVGVCFVCAWQEPALQPALREYTERKKAETIRRTRELLARPLEFIDRLVERFR*
Ga0137387_109889061	3300012349	Vadose Zone Soil	MATSIPCTRCGKLTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLR*
Ga0137372_104599431	3300012350	Vadose Zone Soil	MICTRCGHREAKTEAEAAALAAKGGPVLAAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFQ*
Ga0137367_102638832	3300012353	Vadose Zone Soil	MICTQCGHREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0137366_100993465	3300012354	Vadose Zone Soil	MINCMRCGQPKAHTEAECAALAAKGGPVLPAGVCFPCAWKDPLLQPALREYAERKKAETIRRARELLARPLEFIDRLVDSLR*
Ga0137371_101426851	3300012356	Vadose Zone Soil	RCGKRTAYTEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLW*
Ga0137385_116625801	3300012359	Vadose Zone Soil	AHVLVMICTRCGKRKAYTEAEAAALASKGGPVLPVGVCFICAWQDPALQPELREYTQRKKAQTIRRARELLARPLELIDRLVERFR*
Ga0137375_107080002	3300012360	Vadose Zone Soil	MINCMRCGQPKAHTEAECAALAAKGGPVLPAGVCFPCAWKDPLLQPALREYAERKKAETIRRARELLARPLESIDRLVDSLR*
Ga0137361_101277484	3300012362	Vadose Zone Soil	MICTRCGQRKAYTETEAAALSAKGGPLLPVGVCFLCAWKDPALQPALRAYAERKKAETIRRARELLARPLEFIDRLVERFR*
Ga0137361_106591861	3300012362	Vadose Zone Soil	LAAKGGPALPVGVCFLCAWQDPALQPALREYTERKKAETIRRGRELLARPLEFIDRLVERFR*
Ga0137373_109786291	3300012532	Vadose Zone Soil	MICTQCGHREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFQ*
Ga0137397_101937732	3300012685	Vadose Zone Soil	MINCMRCSQPKAHTEAECATLAAKGGPALPAGVCFPCAWKDPLLQPALREYAERKKAETIGRARELLARPLEFIDRLVESLR*
Ga0137394_114418271	3300012922	Vadose Zone Soil	MICTRCGQREANTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVEGFR*
Ga0137419_109322601	3300012925	Vadose Zone Soil	MICTRCGQREANTEAEAAVLAAKGGPALPAGVCFPCAWKDPALQSGLREYAERKKAETIRRARELLARPLELIDRVVESFR*
Ga0137416_119775131	3300012927	Vadose Zone Soil	RCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR*
Ga0137407_102517372	3300012930	Vadose Zone Soil	MICTRCGQREANTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0134076_103913461	3300012976	Grasslands Soil	MICTRCGHREATTEAEAVALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR*
Ga0137420_12124472	3300015054	Vadose Zone Soil	VMICTRCGKRKAYTEAEAAALASKGGPVLPVGVCFVCAWQDPALQPELREYTQRKKAQTIRRARELLARPLELIDRLVEKFR*
Ga0137403_109152522	3300015264	Vadose Zone Soil	MICTRCGHREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLELIDRLVESFR*
Ga0134069_12673432	3300017654	Grasslands Soil	AEAEAASLAAKGGPVLPAGVCFPCAWQDSTLQPGLREYAERKKAETIRRARELLARPLEFIDRLVESFR
Ga0134074_11881701	3300017657	Grasslands Soil	MICTRCGQRKAYTETEAAALSAKGGPLLPVGVCFLCAWKDPALQPALRAYAERKKAETILRARELLARPLEFIDRLVESFR
Ga0184608_101618963	3300018028	Groundwater Sediment	RCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWQDPALQPALREYARRKKAETIRRARELLVRPLEFIDRLVERFR
Ga0184623_101203742	3300018056	Groundwater Sediment	MTCTRCGQRKAYTEAEAAALAAKGGPVLPVGVCFPCAWQDPALQPALREYARRKKAETIRRARELLARPLEFIDRLVESFR
Ga0184615_106795621	3300018059	Groundwater Sediment	MICTRCGSSKAHTEAECTALAVKGGPTLPAGICFRCAWEDPALHKALSEWAERKKAETYRRVREFLVRPLEFIDRLVDGLR
Ga0184618_100005964	3300018071	Groundwater Sediment	MINCTRCGEPKAHTEAECAALAAKGGPALPTGVCFPCAWKDPLLQPALREYAERKKAETIRRAREILARPLEFIDRLVDSLR
Ga0184618_100053666	3300018071	Groundwater Sediment	MICTRCGKPKAHTEAECAALVGKGGPSLPAGVCFPCAWQDPLLQPGLRDYAERKKAETIRRARELLARPLEFIDRLVDSLR
Ga0184629_101963801	3300018084	Groundwater Sediment	MINCMRCGQPKAHTEAECAALAAKGGPALPAGVCFPCAWKDPLLQPALKEYAERKKAETIRRARELLARPLEFIDRLVDSLR
Ga0066667_103700742	3300018433	Grasslands Soil	MATTIPCTRCGKLTAHTEADYAAIAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLARPLEFIDRFVESLR
Ga0066662_102524772	3300018468	Grasslands Soil	MATTIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR
Ga0066669_104580431	3300018482	Grasslands Soil	MATTIPCTRCGKRTAYTEADYVALAAKGGPVLPGGVCFPCAWRDPALQPALREYAERKKTETICRARELLVRPLEFIDRFVESLW
Ga0193725_10077115	3300019883	Soil	MICTRCGKPKAHTEAECAALVAKGGPLLPAGVCFPCAWEDPLLRPALRDYAERKKAETIRRARELLARPLEFIDRLVDSLR
Ga0193739_10199081	3300020003	Soil	MICTRCGSAEAHTEAEYTALAAKGGPTLPAGICFRCAWEDPALHKALSEWAERKKAETYRRVREFLVRPLEFIDRLVDGLR
Ga0179594_102826491	3300020170	Vadose Zone Soil	MICTRCGQREANTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAETIRRARELLARPLEFIGRLVESFR
Ga0209350_10484972	3300026277	Grasslands Soil	MATTIPCTRCGKLMAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR
Ga0209238_100123614	3300026301	Grasslands Soil	MATTIPCTRCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKVETIRRGRELLARPLEFIDRFVESLR
Ga0209468_10027874	3300026306	Soil	MATTIPCTRCGKRTAYTEADYATLAAKGAPVLPGGVCFPCAWRDPALQPALREYAERKKAETIRRARELLVRPLEFIDRFVESLR
Ga0209131_11837462	3300026320	Grasslands Soil	MICTRCGQREANTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLREYAERKKAENIRRVRELLARPLEFIDRLVESFR
Ga0209159_11345821	3300026343	Soil	AYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR
Ga0209160_11660013	3300026532	Soil	GAKGGPVLPAGVCFPCAWKDPALQPGLRRYAERKKAETIRLARELLARPLEFIDRLVESF
Ga0209056_103168502	3300026538	Soil	MICTRCGQREAKTEAEAAALAAKGGPVLPAGVCFPCAWKDPALQPGLRKYAERKKAETIRRARVLLARPLEFIDRLVESFR
Ga0209388_11540772	3300027655	Vadose Zone Soil	MICTRCGQRKAYTETEAAALSAKGGPLLPVGVCFLCAWKDPALQPALRAYAERKKAETIRRARELLARPLEFIDRLVERFR
Ga0137415_100481381	3300028536	Vadose Zone Soil	RCGKLTAYTDADYAALAAKGGPVLPSGVCFPCAWRDPALQPALRDYAERKKAETIRRGRELLARPLEFIDRFVESLR
Ga0307471_1012867482	3300032180	Hardwood Forest Soil	MTKAIPCTRCGKQTAYSEADYAALAAKGGPVLPGGVCFPCAWRDPALQPALRDYAERKKAETVRRARELLARPLEFIDRLVESFR
Ga0364942_0250933_208_453	3300034165	Sediment	MICPRCGKPKAHTEAECAKLVAKGGPSLPAGVCFPCAWQDPLLQPALRDYAERKKAETIRRARELLARPLEFIDRLVDSLR
Ga0364932_0367221_164_427	3300034177	Sediment	LSKAFHDDLRAVRRAKGTKESECAALVGKGGPLLPDGICFRCAWEDPLLQPALREYAERKKAETIRRAREFLARPLEFIDRLVDSMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072155

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences