Metagenome Family F072151

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072151
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	45 residues
Representative Sequence	MMKDEELRTLLRKRGYTILELSYSSYSDKKRDELYREILNGLGK
Number of Associated Samples	76
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.00 %
% of genes near scaffold ends (potentially truncated)	28.10 %
% of genes from short scaffolds (< 2000 bps)	32.23 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.595 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.628 % of family members)
Environment Ontology (ENVO)	Unclassified (49.587 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01909	NTP_transf_2	4.13
PF04307	YdjM	2.48
PF01850	PIN	2.48
PF13432	TPR_16	1.65
PF05168	HEPN	1.65
PF04242	DUF424	1.65
PF03965	Penicillinase_R	1.65
PF08241	Methyltransf_11	1.65
PF00801	PKD	0.83
PF01351	RNase_HII	0.83
PF13361	UvrD_C	0.83
PF10137	TIR-like	0.83
PF01939	NucS	0.83
PF13456	RVT_3	0.83
PF13649	Methyltransf_25	0.83
PF00227	Proteasome	0.83
PF01548	DEDD_Tnp_IS110	0.83
PF11867	DUF3387	0.83
PF00254	FKBP_C	0.83
PF08774	VRR_NUC	0.83
PF01844	HNH	0.83
PF02182	SAD_SRA	0.83
PF00211	Guanylate_cyc	0.83
PF04480	DUF559	0.83
PF02371	Transposase_20	0.83
PF00557	Peptidase_M24	0.83
PF05050	Methyltransf_21	0.83
PF00145	DNA_methylase	0.83
PF01546	Peptidase_M20	0.83
PF13439	Glyco_transf_4	0.83
PF13482	RNase_H_2	0.83
PF00534	Glycos_transf_1	0.83
PF05866	RusA	0.83
PF01555	N6_N4_Mtase	0.83
PF08843	AbiEii	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	2.48
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.65
COG2412	Uncharacterized conserved protein, DUF424 domain	Function unknown [S]	1.65
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.65
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.65
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	1.65
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.83
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.83
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.83
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.83
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	0.83
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.83
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.83
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	0.83
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.83
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
All Organisms	root	All Organisms	31.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
cellular organisms	root	All Organisms → cellular organisms	29.75 %
Viruses	superkingdom	All Organisms → Viruses	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	26.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	12.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	10.74 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	9.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Methanomassiliicoccales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	9.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Methanomassiliicoccaceae	family	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	9.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Methanomassiliicoccus	genus	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae → Methanomassiliicoccus	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.60 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	9.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.65 %
Methanomassiliicoccus luminyensis	species	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae → Methanomassiliicoccus → Methanomassiliicoccus luminyensis	0.83 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.83 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10035147	Not Available	1963	Open in IMG/M
3300002562\|JGI25382J37095_10195670	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	613	Open in IMG/M
3300005166\|Ga0066674_10131979	All Organisms → cellular organisms → Archaea → Euryarchaeota	1173	Open in IMG/M
3300005167\|Ga0066672_10942182	All Organisms → cellular organisms → Archaea	531	Open in IMG/M
3300005174\|Ga0066680_10401784	Not Available	870	Open in IMG/M
3300005176\|Ga0066679_10570796	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005447\|Ga0066689_10037838	All Organisms → Viruses → Predicted Viral	2513	Open in IMG/M
3300005450\|Ga0066682_10418577	Not Available	856	Open in IMG/M
3300005552\|Ga0066701_10108992	All Organisms → cellular organisms → Archaea	1627	Open in IMG/M
3300005554\|Ga0066661_10836912	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300005556\|Ga0066707_10882634	Not Available	549	Open in IMG/M
3300005558\|Ga0066698_10339538	All Organisms → cellular organisms → Archaea	1039	Open in IMG/M
3300005568\|Ga0066703_10741582	Not Available	563	Open in IMG/M
3300005568\|Ga0066703_10864838	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	516	Open in IMG/M
3300005586\|Ga0066691_10279094	Not Available	984	Open in IMG/M
3300007265\|Ga0099794_10005723	All Organisms → cellular organisms → Archaea	5009	Open in IMG/M
3300009822\|Ga0105066_1048090	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	892	Open in IMG/M
3300010304\|Ga0134088_10105432	All Organisms → cellular organisms → Archaea	1328	Open in IMG/M
3300010329\|Ga0134111_10475575	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300010333\|Ga0134080_10030663	Not Available	2047	Open in IMG/M
3300010333\|Ga0134080_10168679	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae → Methanomassiliicoccus → Methanomassiliicoccus luminyensis	935	Open in IMG/M
3300010333\|Ga0134080_10238287	Not Available	799	Open in IMG/M
3300010398\|Ga0126383_12527957	Not Available	598	Open in IMG/M
3300011271\|Ga0137393_10921273	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012203\|Ga0137399_10000465	All Organisms → cellular organisms → Archaea	16004	Open in IMG/M
3300012203\|Ga0137399_10449609	All Organisms → cellular organisms → Archaea	1078	Open in IMG/M
3300012206\|Ga0137380_10047402	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3944	Open in IMG/M
3300012206\|Ga0137380_10338923	All Organisms → cellular organisms → Archaea	1342	Open in IMG/M
3300012206\|Ga0137380_10591838	All Organisms → cellular organisms → Archaea → TACK group	971	Open in IMG/M
3300012209\|Ga0137379_11316036	Not Available	628	Open in IMG/M
3300012349\|Ga0137387_10034091	All Organisms → cellular organisms → Archaea	3308	Open in IMG/M
3300012349\|Ga0137387_10034291	All Organisms → cellular organisms → Archaea	3299	Open in IMG/M
3300012351\|Ga0137386_10555930	All Organisms → cellular organisms → Archaea	826	Open in IMG/M
3300012359\|Ga0137385_10033348	All Organisms → cellular organisms → Bacteria	4618	Open in IMG/M
3300012359\|Ga0137385_10426475	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300012359\|Ga0137385_10658973	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	876	Open in IMG/M
3300012359\|Ga0137385_11061525	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	667	Open in IMG/M
3300012930\|Ga0137407_10337520	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1385	Open in IMG/M
3300017654\|Ga0134069_1309963	All Organisms → cellular organisms → Archaea → TACK group	561	Open in IMG/M
3300018468\|Ga0066662_11018651	Not Available	821	Open in IMG/M
3300025174\|Ga0209324_10284646	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1071	Open in IMG/M
3300025313\|Ga0209431_10523834	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	899	Open in IMG/M
3300026296\|Ga0209235_1165997	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	845	Open in IMG/M
3300026313\|Ga0209761_1029439	All Organisms → cellular organisms → Archaea	3319	Open in IMG/M
3300026317\|Ga0209154_1136873	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1027	Open in IMG/M
3300026317\|Ga0209154_1283946	All Organisms → cellular organisms → Archaea	550	Open in IMG/M
3300026328\|Ga0209802_1085981	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1447	Open in IMG/M
3300026548\|Ga0209161_10062448	All Organisms → Viruses → Predicted Viral	2377	Open in IMG/M
3300027655\|Ga0209388_1013594	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2225	Open in IMG/M
3300032180\|Ga0307471_101556588	Not Available	818	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.69%
Loam	Environmental → Terrestrial → Soil → Loam	2.48%
Sand	Environmental → Terrestrial → Soil → Sand	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	44.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.83%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101666081	3300002558	Grasslands Soil	DEELRSLLRKRGYRILELSYGSYTDKKRDELYREILNGLGK*
JGI25384J37096_101580481	3300002561	Grasslands Soil	MKDEELRTLLRKKGYRLLELCYDNYSDKKRDELYEEILANLGMT*
JGI25382J37095_100351472	3300002562	Grasslands Soil	MTKDEELRTLLRKRGYRILELYYDIYSDKKRDQLYEQILKDLSMQ*
JGI25382J37095_101604991	3300002562	Grasslands Soil	HLKTAQMMKDEELRSLLRKRGYRILELSYGTYSDKKRDELYREILNGLGR*
JGI25382J37095_101956701	3300002562	Grasslands Soil	MTKDEELRTLLRKRGYRILELSYSSYSDKKRDELYREIMSGLGK*
JGI25386J43895_100260192	3300002912	Grasslands Soil	MMKDEELRTLLRKRGYTILELSYSSYSDKKRDELYREILNGLGK*
Ga0066674_101319791	3300005166	Soil	MTKDEELRTLLRKRGYRILELFYDSYTDKKREQLYEAILDSLGRQ*
Ga0066674_105018671	3300005166	Soil	LKTTQIVKDEELRSLLGKRGYRVLELAYSSYSDKKRDELYEKILDNLGRS*
Ga0066672_109421821	3300005167	Soil	MSKDEELRTLLRKRGYRILELFYESYSDKKRDQLYEEIQN
Ga0066680_100537565	3300005174	Soil	MMKDEELWTLLRKRGYRILELSYSSYTNKKGDELFREIVNKVGRE*
Ga0066680_104017841	3300005174	Soil	KDEELRSLLRKRGYRVLELCYNSYSDKKRDQLYEGILTGLGKQ*
Ga0066679_104526491	3300005176	Soil	LRTLLRKRGYKVMELVYGSYSDKKRDELYQEIVMQLGKE*
Ga0066679_105707962	3300005176	Soil	TAQMMKDEELRTLLRKKGYRVLEPYYDSYSDKKRDQLYEEILTNLARI*
Ga0066685_108644252	3300005180	Soil	MAKDEEPRTLLRKRGYKVLELIYRSYSDKKRDELYQEIIKELGRE*
Ga0066689_100378381	3300005447	Soil	MAKDEELRTLLRKRGYRILELFYESYSDKKRDQLYEEIQNSLAKLGT*
Ga0066682_104185771	3300005450	Soil	SQMTKDEETRTLLRKKGYRILELYYESYSDKKRDQLYREILAAIGMSSPL*
Ga0070699_1000585193	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MMKDEKLRSLLRKRGYRVLELSYTGYSDKKRDELYREIMSQLGK*
Ga0070699_1003522822	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSQMIRDGETRSLLRKRGYRALELSYTGYTDKKRDELCREIMSHLGK*
Ga0066701_1000282411	3300005552	Soil	KDEELRTLLRKRGYRILELVYGSYTDKKGDELYREILNGLG*
Ga0066701_101089921	3300005552	Soil	DEELRLLLRKRGYRILELYHDSYSDKKRDELYNEIRNGLRIARS*
Ga0066661_108369121	3300005554	Soil	DEELRGLLRKRGYRILELYYDSYSDKKRDELYEEMMNSLGRE*
Ga0066707_108826342	3300005556	Soil	KDEELRSLLRKRGYRVLELRYDSYSDKKRDQLYEQILSDLRRT*
Ga0066698_103395381	3300005558	Soil	MSKDEELRTLLRKRGYRTLELFYESYSDKKRDQLYEEIQNSLAKLAT*
Ga0066703_107415822	3300005568	Soil	HLNTAQMMKDEELRTLLRKKGYRVLEPYYDSYSDKKRDQLYEEILTNLARI*
Ga0066703_108648381	3300005568	Soil	VKDEELRSLLRKRGYRIIELFYDSYSDKKRDELYEQILSDLNRR*
Ga0066708_102401521	3300005576	Soil	QMVKDEELRSLLRKRGYRILKLSYSSYTDKKRDELYREILNGLGK*
Ga0066691_102790942	3300005586	Soil	MAKDEEVRSLLRKRGYRVLELTYNSYSDKKRDDLYEEISNSL
Ga0066656_100311401	3300006034	Soil	TLLRKRGYKVMELIYRSYSDKKRDELYQEIVTQLGRE*
Ga0066665_111474382	3300006796	Soil	HLARAQMIRDKETRLLLRKRGYGILELSYGSYTDKKRDRLYREILNGLGK*
Ga0099791_101332562	3300007255	Vadose Zone Soil	MKDEELRTLLRKRGYRVLELSYTGYTDKKRDELYREILNGLGK*
Ga0099794_100057234	3300007265	Vadose Zone Soil	MVKDEELRSLLRKRGYRVLELLYIKYSEKKRDQLYEEILDNLVGSGAIH*
Ga0066710_10000322112	3300009012	Grasslands Soil	MAKDEELRTLLRKRGYKVVELVYRSYSGKKRDELYQEIVKQLGRE
Ga0066710_1025780021	3300009012	Grasslands Soil	DEELRTLLRKRGYRVLELSYTGYTDKKRDELYRELVERLGRE
Ga0099829_110513122	3300009038	Vadose Zone Soil	LRTLLRKRGYRVLELSYSSYSDKKRDKLYREMVSALGK*
Ga0099830_117088291	3300009088	Vadose Zone Soil	MSQMKDEELRTILRKGGYRILELSYSSYSDKRRDELYR
Ga0099828_100868795	3300009089	Vadose Zone Soil	MSQMKDEELRTILRKGGYRILELSYSSYSDKKRDELYREIMSGLGK*
Ga0099827_100525833	3300009090	Vadose Zone Soil	MSQMKDEELRTILRKRGYRILEPSYSSYSDKKRDELYREIMSGLGK*
Ga0066709_1001067042	3300009137	Grasslands Soil	MAKDEELRTLLRNRGYKVMELVYRSYSDKKRDELFQEIVKQLGREESG*
Ga0066709_1017641061	3300009137	Grasslands Soil	MMKDEELRTLLRKRGYRILELRYSSYSDKKRDELYREIMSGLGK*
Ga0066709_1024573692	3300009137	Grasslands Soil	DEELRTLLRKRGYRILELTYDNYSDKKRDELYEEILDSLGREI*
Ga0105066_10480903	3300009822	Groundwater Sand	VKDEELRSLLRKRGYRVLELYYNSYSNKKRDQLYSEILNSLGREYP*
Ga0134088_101054324	3300010304	Grasslands Soil	AQMAKDEELSSLLRKRGYRILELCYNNYSDKKRDELYKEIRHSLHS*
Ga0134088_101959822	3300010304	Grasslands Soil	LKTSQMMKDEELRTLLRKRGYGILELSYGSYTDKKRDRLYREILNGLGK*
Ga0134111_104013591	3300010329	Grasslands Soil	EELRTLLRKRGYKVMELIYRNYSDKKRDELYQELVQQLGREQGGNT*
Ga0134111_104755751	3300010329	Grasslands Soil	AQMAKDEELRSLLRKRGYRILELFYDSYSDKKRDQLYEEIRKGLHSSSS*
Ga0134111_105542862	3300010329	Grasslands Soil	MAKDEELRTLLRKRGYKVMELIYRSYSDKKRDELYEEIVTQLGRE*
Ga0134080_100306631	3300010333	Grasslands Soil	KDEETRTLLRKKGYRILELSYSNYSDKKRDQLYQDILAGLGREL*
Ga0134080_101686792	3300010333	Grasslands Soil	DEELRSLLRKRGYRILELFYDSYSDKKRDMMYEQILYDLGTE*
Ga0134080_102382871	3300010333	Grasslands Soil	KDEELRTLLRKRGYRILELYYNSYSDKKRDQLFKELLDNLGKL*
Ga0126383_125279572	3300010398	Tropical Forest Soil	MKDEEVRSLLRKKGYKVLEPYDESYSEKKRHELYLEIIKTLGRE*
Ga0137393_109212731	3300011271	Vadose Zone Soil	TSQMTKDEETRTLLRKKGYRILELPYDSYSDKKRDELYQEILDSLGTNEVD*
Ga0137388_110398962	3300012189	Vadose Zone Soil	HLKTAQMMKDEELRTLLRKRGYRVLELSYSSYTDKKTDELYREILNGLGK*
Ga0137364_109984912	3300012198	Vadose Zone Soil	ELRTLLRKRGYKIVELAYTDYSDKKRDELFQQLLAGLGQE*
Ga0137399_100004655	3300012203	Vadose Zone Soil	MVKDEELRSLLRKRGYRVLELLYIKYSEKKRDQLYEEILDNLVGSGPIR*
Ga0137399_104496092	3300012203	Vadose Zone Soil	MVKDEELRTLLRKRGYRIIELVYSSYTDKKRDELYREILNGLGK*
Ga0137374_110264191	3300012204	Vadose Zone Soil	RTLLRKRGYKVMELIYRSYSDKKRDALYQEIVRQLERK*
Ga0137362_111335751	3300012205	Vadose Zone Soil	MVKDEELRALLRKRGYRVLELSYSGYSDKKRDELYEEILNGRGRSLAAR
Ga0137380_100181751	3300012206	Vadose Zone Soil	LRTLLRKRGYKVMELVYHNYSDKKRDELYQEIVKELGRE*
Ga0137380_100474021	3300012206	Vadose Zone Soil	QMAKDGELRILLRKKGYRVLELYYENYTDKKRDQLYHEILDKLGME*
Ga0137380_103389231	3300012206	Vadose Zone Soil	MSKDEELRTLLRKRGYRILEIFYESYSDKKRDQLYEEIQNSLAKLGT*
Ga0137380_105123013	3300012206	Vadose Zone Soil	MMKDEELRTLLRKRGYRVLELNYTGYTDKKRDELYREIVKQLGRE*
Ga0137380_105918381	3300012206	Vadose Zone Soil	QMMKDEELRILLRKRGYRVLELYYDSYSNLKRDKLYRQLLGSLGKE*
Ga0137380_114697152	3300012206	Vadose Zone Soil	KDEELRTLLRNRGYMVLELYYASYSDKKRDELYREILTSLGRS*
Ga0137381_104188381	3300012207	Vadose Zone Soil	PHLRTIQMAKDEELRTLLRKRGYKVMELIYNSYSDKKRDELYQEILTQLGRE*
Ga0137381_104910793	3300012207	Vadose Zone Soil	GLPHLRTIQMAKDEELRTLLRKRGYEVMELIYLSYSDKKRDELYQEIVKQLGRE*
Ga0137381_107097353	3300012207	Vadose Zone Soil	QMAKDEELRSLLRKRGYRILELCYECYSDKKRDELYEGILSGLGNQ*
Ga0137379_108864971	3300012209	Vadose Zone Soil	KDEELRSLLRKRGYRILELCYECYSDKKRDELYEGILSGLGNQ*
Ga0137379_113160361	3300012209	Vadose Zone Soil	RSLLRRRGYRILELFYESYSDKKRDHLYEEILASLNRLTR*
Ga0137379_113272202	3300012209	Vadose Zone Soil	RKKGYRVLELFYHNYSDKKRDELYEEILASLGRAGLW*
Ga0137379_117163402	3300012209	Vadose Zone Soil	RTLLRKRGYRVLELSYTGYTDKKRDELYREILNGLGK*
Ga0137378_104747141	3300012210	Vadose Zone Soil	IQMAKDEELRTLLRKRGYKVMELIYRSYSDKKRDELYQELVEQLGRE*
Ga0137378_104993962	3300012210	Vadose Zone Soil	MMKDEELRTLLRKRGYRVLELSYTGYTDKKRDEFYREIANGLGK*
Ga0137378_110315171	3300012210	Vadose Zone Soil	EELRSLLRKRGYRILELRYDRYSDKKRDKLYEEILEGLGIG*
Ga0137378_117435842	3300012210	Vadose Zone Soil	QMVKDEELRTLLRKRGYRILELNYDSYSNKRRDELYQEILSNLGKE*
Ga0137387_100340912	3300012349	Vadose Zone Soil	MSKDEELRTLLRKRGYRILEIFYESYSDKKRDQLYEEIQNSLAKLATSRV*
Ga0137387_100342911	3300012349	Vadose Zone Soil	MKDEELRSLLLKRGYRILELSYNNYSDSKRDQLYEEIQNSLAKLTH*
Ga0137387_113294312	3300012349	Vadose Zone Soil	QMIKDEELRTLLRKRGYRVVELGYANYSDKKRDELYQQLLSSLGRE*
Ga0137386_100175844	3300012351	Vadose Zone Soil	MAKDEELRTLLRKRGYKVMELVYHNYSDKKRDELYQEIVKELGRE*
Ga0137386_100621705	3300012351	Vadose Zone Soil	TEKDEELRTLLRKRGYRVLELCYDNYSDKKRDELCEEILANQGTN*
Ga0137386_100800863	3300012351	Vadose Zone Soil	MRAIQMAKDEELRTLLRKRGYKIMELVYRSYSDKKRDELYQEIVKQLGRE*
Ga0137386_102518331	3300012351	Vadose Zone Soil	QMMKDEELRTLLRKRGYRILEVSYSSYSDKKRDELYREILNGLGKQ*
Ga0137386_105559302	3300012351	Vadose Zone Soil	MMKDEELRTLLRRRGYRVLELSYTGYTDKKRDEFYREIMNGLGK*
Ga0137366_111269521	3300012354	Vadose Zone Soil	KDEELRTLLRKRGYRILELSYSSYTDRKRDELYQEIFQQLGRE*
Ga0137369_101956631	3300012355	Vadose Zone Soil	RSLLRKRGYRILELVYSSYTDKKRDELYQEIFQQLGRE*
Ga0137384_100185441	3300012357	Vadose Zone Soil	EELRSLLRKRGYRILELSYDYYSDKKRDELYEEVLNSLNRR*
Ga0137384_114543251	3300012357	Vadose Zone Soil	VMKDEELRTLLRKKGHTLLELCYDNYSDKKRDQLYDEILANLGII*
Ga0137385_100333483	3300012359	Vadose Zone Soil	MSKDEELRTLLRKRGYRILEIFYESYSDKKRDQLYEEIQNSLA
Ga0137385_104264753	3300012359	Vadose Zone Soil	QMTKDEETRTLLRKRGYRVLELRYNDYSDKKRDQLYEELLDNLGKEYPVNSEN*
Ga0137385_106589731	3300012359	Vadose Zone Soil	DEELRTLLRKRGYRILEIFYESYSDKKRDQLYEEIQNSLAKLGT*
Ga0137385_110615251	3300012359	Vadose Zone Soil	DEELRTLLRKRGYRILEIFYESYSDKKRDQLYEEIQNSLAKLATSRV*
Ga0137361_108186131	3300012362	Vadose Zone Soil	MMKDEELWPLLRKRGYRILELSYSSYTDKKRDEFYREIMNGLGK*
Ga0137419_106039081	3300012925	Vadose Zone Soil	VKDEELRTLLRKRGYTILELSYSSYTDKKRDELYREILNGIGK*
Ga0137416_109986063	3300012927	Vadose Zone Soil	MKDEELRTLLRKRGYRVLELSYTGYTDKKRDELCREILNGLGR*
Ga0137407_103375203	3300012930	Vadose Zone Soil	MKGEELRTLLRNKGYRLLELCYDNYSDKKRDELYDEILANLGII*
Ga0134087_105013711	3300012977	Grasslands Soil	RSLLRKRGYRILELYYDSYSGQKRDELYEQILDDLRRK*
Ga0134069_13099631	3300017654	Grasslands Soil	SRIVKDEELRSLLRKRGYRVSELCYESYSDKIRDHLYEEIRNSLAKLAT
Ga0066655_107787411	3300018431	Grasslands Soil	EELRTLLRKRGYRILELVYGSYTDKKGDALYREILNGLG
Ga0066667_109389242	3300018433	Grasslands Soil	MAKDGELRTLLRKRGYKVIELVYRSYSGKKRDELYQEIVKQLGR
Ga0066662_100496594	3300018468	Grasslands Soil	MMKDEELWTLLRKRGYRILELSYSSYTNKKGDELFREIVNKVGRE
Ga0066662_110186511	3300018468	Grasslands Soil	MAKDEELRSLLRKRGYRVLELCYNSYSDKARDRLYQQVLNDLR
Ga0066662_117702491	3300018468	Grasslands Soil	RTKNYRSLLRKRGYRILELSYSSYSDKKRNELYREILNGLGK
Ga0066662_121756921	3300018468	Grasslands Soil	MAKDEELRTLLRKRGYKVMELIYRSYSDKKRDELYQEIVKQLGRE
Ga0209324_102846462	3300025174	Soil	GKDEELRSLLRKRGYRVLELYYDNYSEKKRDKLYEEILDGLGKE
Ga0209431_105238341	3300025313	Soil	KDEELRSLLRKRGYRVLELYYNSYSDKKRDQLYGEILNGLGKE
Ga0209234_10235793	3300026295	Grasslands Soil	MAKDEELRTLLRNRGYKVMELVYRSYSDKKRDELFQEIVKQLGREESG
Ga0209235_11659971	3300026296	Grasslands Soil	KTSQMTKDEETRTLLRKKGYRILELYYSNYSDKKRDQLYQDILAGLGRES
Ga0209236_10680983	3300026298	Grasslands Soil	AQMMKDEELRTLLRKKGYRVLELSYTGYSDKKRDELYGEIMSHIGR
Ga0209055_11271663	3300026309	Soil	EELRTLLLKKGYRLLELFYDNYSDKKRDELYDEILANLGII
Ga0209761_10294395	3300026313	Grasslands Soil	MKDEELRTLLRKKGYRLLELCYDNYSDKKRDELYEEILANLGMT
Ga0209761_10526641	3300026313	Grasslands Soil	DEELRTLLRKRGYRILELSYGSYTDKKRDELYREILNGLGK
Ga0209154_11368732	3300026317	Soil	MSKDEELRTLLRKRGYRILELFYESYSDKKRDQLYEEIQNSLAKLGT
Ga0209154_12839461	3300026317	Soil	MSKDEELRTLLRKRGYRILELFYESYSDKKRDQLYEEIQNSL
Ga0209472_10614711	3300026323	Soil	EKSQMLKDEELRSLLRKRGYRVLELSYNSYSDKKRDELHEEIRSGLARLAS
Ga0209802_10859811	3300026328	Soil	MAKDEELRTLLRKRGYRILELFYESYSDKKRDQLYEEIQNSLAKLGT
Ga0209056_100373436	3300026538	Soil	DEELRTILRKRGYRILELVYSSYSDKKRDELYREVLNGLGK
Ga0209161_100624484	3300026548	Soil	QMTKDEELRSLLRKRGYRILELFYDNYSDKKRDQLYQQVLDDLR
Ga0209388_10135943	3300027655	Vadose Zone Soil	MKDEELRTLLRKRGYRVLELSYTGYTDKKRDELYREILNGLGK
Ga0209283_107401521	3300027875	Vadose Zone Soil	KDEELRTLLRKRGYQILELYYSSYSEKKRDELYQEIVKQLGRE
Ga0209590_100280361	3300027882	Vadose Zone Soil	MSQMKDEELRTILRKRGYRILELSYSSYSDKKRDELYREIMSGLGK
Ga0137415_100867894	3300028536	Vadose Zone Soil	MKDEELRTLLRKRGYRVLELSYTGYTDKKRDELCREILNGLGR
Ga0307471_1015565882	3300032180	Hardwood Forest Soil	MMKDEELRGILRKRGYRILELYYDSYSGKKRDELYNEILNGLGKENSGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072151

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences