Metagenome Family F072148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072148
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	55 residues
Representative Sequence	MNNVAETRSTALPAITSSYTLPMVLAINTFALLALDQLGQIPVWIKSAVALFLAF
Number of Associated Samples	95
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.50 %
% of genes near scaffold ends (potentially truncated)	17.36 %
% of genes from short scaffolds (< 2000 bps)	74.38 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.521 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.446 % of family members)
Environment Ontology (ENVO)	Unclassified (32.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.99% β-sheet: 0.00% Coil/Unstructured: 53.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF02954	HTH_8	33.88
PF13581	HATPase_c_2	33.88
PF01740	STAS	10.74
PF13492	GAF_3	4.96
PF00378	ECH_1	1.65
PF10728	DUF2520	1.65
PF13432	TPR_16	0.83
PF13462	Thioredoxin_4	0.83
PF12695	Abhydrolase_5	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.52 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	65.29 %
Unclassified	root	N/A	2.48 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	57.85 %
Unclassified	root	N/A	2.48 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.83 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.85 %
Unclassified	root	N/A	2.48 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001664\|P5cmW16_1045529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300004006\|Ga0055453_10094427	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300004463\|Ga0063356_100181468	All Organisms → cellular organisms → Bacteria	2453	Open in IMG/M
3300005171\|Ga0066677_10460605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300005174\|Ga0066680_10133938	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300005174\|Ga0066680_10369298	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005174\|Ga0066680_10436464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300005174\|Ga0066680_10526197	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005176\|Ga0066679_10698884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300005177\|Ga0066690_10382796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300005178\|Ga0066688_10060603	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300005179\|Ga0066684_10906658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300005181\|Ga0066678_10259175	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300005186\|Ga0066676_10317301	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300005328\|Ga0070676_11023966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005332\|Ga0066388_105933428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005445\|Ga0070708_100042903	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300005445\|Ga0070708_100046704	All Organisms → cellular organisms → Bacteria → Acidobacteria	3821	Open in IMG/M
3300005446\|Ga0066686_10009034	All Organisms → cellular organisms → Bacteria → Acidobacteria	5056	Open in IMG/M
3300005447\|Ga0066689_10188330	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005467\|Ga0070706_100195514	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300005468\|Ga0070707_100221468	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300005468\|Ga0070707_100271801	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300005471\|Ga0070698_100069223	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300005471\|Ga0070698_100580905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300005471\|Ga0070698_101316627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005471\|Ga0070698_101725819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300005518\|Ga0070699_100057128	All Organisms → cellular organisms → Bacteria	3380	Open in IMG/M
3300005529\|Ga0070741_10033305	All Organisms → cellular organisms → Bacteria → Acidobacteria	7042	Open in IMG/M
3300005529\|Ga0070741_10775304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300005529\|Ga0070741_10875308	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005534\|Ga0070735_10079247	All Organisms → cellular organisms → Bacteria	2099	Open in IMG/M
3300005536\|Ga0070697_100037400	All Organisms → cellular organisms → Bacteria	3921	Open in IMG/M
3300005536\|Ga0070697_100777674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300005552\|Ga0066701_10832015	Not Available	549	Open in IMG/M
3300005555\|Ga0066692_10893878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005557\|Ga0066704_10702089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300005558\|Ga0066698_10896053	Not Available	568	Open in IMG/M
3300005559\|Ga0066700_10473099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300005560\|Ga0066670_10751137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005568\|Ga0066703_10374628	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005897\|Ga0075281_1002241	All Organisms → cellular organisms → Bacteria → Acidobacteria	2249	Open in IMG/M
3300005904\|Ga0075280_10051625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300006046\|Ga0066652_100098685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300006796\|Ga0066665_11282865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300006903\|Ga0075426_10914552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300006903\|Ga0075426_10974041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300006914\|Ga0075436_101549482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300007255\|Ga0099791_10375237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300009012\|Ga0066710_100056747	All Organisms → cellular organisms → Bacteria → Acidobacteria	4905	Open in IMG/M
3300009012\|Ga0066710_100105051	All Organisms → cellular organisms → Bacteria	3793	Open in IMG/M
3300009038\|Ga0099829_10015859	All Organisms → cellular organisms → Bacteria → Acidobacteria	5037	Open in IMG/M
3300009089\|Ga0099828_10085530	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300009089\|Ga0099828_10766021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300009090\|Ga0099827_10272664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300009090\|Ga0099827_10281451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300009137\|Ga0066709_100006055	All Organisms → cellular organisms → Bacteria	10135	Open in IMG/M
3300009137\|Ga0066709_102404551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300009147\|Ga0114129_10098688	All Organisms → cellular organisms → Bacteria	4042	Open in IMG/M
3300010304\|Ga0134088_10243277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300010364\|Ga0134066_10257070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300011269\|Ga0137392_11316314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300011270\|Ga0137391_10050411	All Organisms → cellular organisms → Bacteria → Acidobacteria	3548	Open in IMG/M
3300012096\|Ga0137389_10827446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300012200\|Ga0137382_10744061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300012200\|Ga0137382_10965487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012203\|Ga0137399_10724017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300012204\|Ga0137374_10053656	All Organisms → cellular organisms → Bacteria → Acidobacteria	4121	Open in IMG/M
3300012206\|Ga0137380_10850454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012207\|Ga0137381_11806721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012208\|Ga0137376_10129865	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300012208\|Ga0137376_10486153	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300012208\|Ga0137376_10868750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012211\|Ga0137377_10740589	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300012211\|Ga0137377_11291526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012212\|Ga0150985_100286821	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012285\|Ga0137370_10270011	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300012349\|Ga0137387_11099001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012350\|Ga0137372_10114264	All Organisms → cellular organisms → Bacteria	2245	Open in IMG/M
3300012353\|Ga0137367_10080039	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
3300012356\|Ga0137371_10329683	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300012363\|Ga0137390_10316658	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300012922\|Ga0137394_10588286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300012925\|Ga0137419_10761983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300012944\|Ga0137410_12077410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300013503\|Ga0120127_10048264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300014166\|Ga0134079_10574016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300015164\|Ga0167652_1065159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300015358\|Ga0134089_10486165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017927\|Ga0187824_10092041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300017937\|Ga0187809_10022569	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300017994\|Ga0187822_10067516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300018431\|Ga0066655_10346392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300018433\|Ga0066667_11087332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300018468\|Ga0066662_10690145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300018468\|Ga0066662_10690878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300018482\|Ga0066669_10519972	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300021384\|Ga0213876_10261755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300021559\|Ga0210409_11076545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300025910\|Ga0207684_10428602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300025922\|Ga0207646_10064191	All Organisms → cellular organisms → Bacteria	3277	Open in IMG/M
3300025922\|Ga0207646_10072962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3065	Open in IMG/M
3300025922\|Ga0207646_10440049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300025990\|Ga0208527_1002587	All Organisms → cellular organisms → Bacteria	2325	Open in IMG/M
3300026325\|Ga0209152_10322091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300026331\|Ga0209267_1249937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300026331\|Ga0209267_1282799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300026551\|Ga0209648_10164223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1738	Open in IMG/M
3300027684\|Ga0209626_1198050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027748\|Ga0209689_1257005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300027846\|Ga0209180_10146297	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300027875\|Ga0209283_10490062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300027882\|Ga0209590_10229154	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300027986\|Ga0209168_10073613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1789	Open in IMG/M
3300031720\|Ga0307469_11267984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300031720\|Ga0307469_11464383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300031753\|Ga0307477_10017195	All Organisms → cellular organisms → Bacteria	4934	Open in IMG/M
3300031820\|Ga0307473_10968426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300032180\|Ga0307471_100060756	All Organisms → cellular organisms → Bacteria	3190	Open in IMG/M
3300032783\|Ga0335079_10144882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.39%
Host-Associated	Host-Associated	6.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.08%
Plants	Host-Associated → Plants	6.61%
Aquatic	Environmental → Aquatic	3.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.13%
Freshwater	Environmental → Aquatic → Freshwater	2.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.65%
Marine	Environmental → Aquatic → Marine	0.83%
Roots	Host-Associated → Plants → Roots	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.25%
Loam	Environmental → Terrestrial → Soil → Loam	16.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.48%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.83%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025990	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P5cmW16_10455293	3300001664	Permafrost	MNNVAETRSSTNAVSMPYTLSMMLAANTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0055453_100944272	3300004006	Natural And Restored Wetlands	MNQIAETRTNPLSVATSWALPMMLAINTFALLALDRMGQIPAWLKSAVALFLSF*
Ga0063356_1001814682	3300004463	Arabidopsis Thaliana Rhizosphere	MNNIAQTRTQSISLSYALPMVLAINTFTLLALDQLGQIPTWIKSAVALFLSF*
Ga0066677_104606051	3300005171	Soil	MNDVAETTRSNTLSNASSYALPMLLAINTFALLALDRAGQIPSWIKSAVALFLAF*
Ga0066680_101339382	3300005174	Soil	MNDIAETSRSNALSSASSYALPMLLAINTFALLALDRLGQIPPWIKSAVALFLAF*
Ga0066680_103692983	3300005174	Soil	RGVTMNNVAETRSNTISIPYALSMLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0066680_104364642	3300005174	Soil	MHDIAETTRSTALSNATSYALPMLLAINTFALLALDRLGQIPSWIKSAVALFLAF*
Ga0066680_105261972	3300005174	Soil	MRGITMNNVAETRSTALPAITSSYTLPMVLAINTFALLALDQLGQIPVWIKSAVALFLAF
Ga0066679_106988842	3300005176	Soil	MNDVAETRTTALPTITGSYTLPMLLAINTFALLALNELGQIPAWIKSAVALFLAF*
Ga0066690_103827961	3300005177	Soil	MNNVAETTRSNALANATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF*
Ga0066688_100606032	3300005178	Soil	MNNVAETRSTALPAIASSYTLPMVLAINTFALLALDQLGQIPVWIKSAVALFLAF*
Ga0066684_109066582	3300005179	Soil	MNNIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0066678_102591753	3300005181	Soil	VAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWLKSAVALFLAF*
Ga0066676_103173011	3300005186	Soil	RGVTMNNVAETTRSNTLSSASSYALPMMLAINTFALLALERLGQIPAWVKSAVALFLAF*
Ga0070676_110239661	3300005328	Miscanthus Rhizosphere	MNNIAETRTQSISLSYALPMVLAINTFTLLALDQLAQIPAWVKTAVALFLSF*
Ga0066388_1059334281	3300005332	Tropical Forest Soil	MNNVAETTRSTAISNATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLSF*
Ga0070708_1000429034	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0070708_1000467044	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRGVTMNNVAETRATTLSAVSTSYSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF*
Ga0066686_100090345	3300005446	Soil	MNNVAETTRSNTLSSASSYALPMMLAINTFALLALERLGQIPAWVKSAVALFLAF*
Ga0066689_101883302	3300005447	Soil	MNNVAETRSTALPAITPSYTLPMVLAINTFALLALNQLGQIPSWIKSAVALFLAF*
Ga0070706_1000074094	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEVARQMRGVTMNNVAETRATTLSAVSTSYSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF*
Ga0070706_1001955143	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRGVTMNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0070707_1002214682	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETTRSTQLSAATSYALPMVLAINTFALLALERLGQIPVWIKSAVAVFLAF*
Ga0070707_1002718014	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNDVAETRSTALPTVTSSYTLPMVLAINTFALLALEQLGSIPVWIKSAVALFLAF*
Ga0070698_1000692232	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LNNIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0070698_1005809051	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVAETRSTTLPTVTSSYTLPMVLAINTFALLALEQLGSIPVWIKSAVALFLAF*
Ga0070698_1013166272	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETTRSSALSNATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF*
Ga0070698_1017258191	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRGVTLNNVAETRATTLSAVSTSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF
Ga0070699_1000571281	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETRATTLSAVSTSYSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF*
Ga0070741_100333057	3300005529	Surface Soil	MNQVAESRSNTLSNAMSYALPMLLAVNTFALLALDRLGQIPSWLKSAVALFLAF*
Ga0070741_107753042	3300005529	Surface Soil	MNEVAQTTRGTLLSNASGYALPMLLAINTFALLALDRLGEIPSWIKSAVALFLAF*
Ga0070741_108753082	3300005529	Surface Soil	MNEVAETTRSTALTNLSSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF*
Ga0070735_100792474	3300005534	Surface Soil	MNEVAETTRSTAITNLSSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF*
Ga0070697_1000374004	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAV
Ga0070697_1007776741	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0066701_108320152	3300005552	Soil	MNNVAETTRTTALSPVSTSYTLPMLLAINTFALLALEQLGQIPAWIKSAVALFLAF*
Ga0066692_108938782	3300005555	Soil	MNNVAETRSSSNAVSMPYTLSMTLAVNTFALLALDHLGQIPAWIKSAVALFLA
Ga0066704_107020891	3300005557	Soil	MNNVAETRSSSNAVSMPYTLSMMLAVNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0066698_108960532	3300005558	Soil	MRGVTMNNVAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0066700_104730992	3300005559	Soil	MRGVTMNNVAETRSSSTVSMPYTLSMMLAINTFALLALDHLGQIPSWIKSAVALFLAF*
Ga0066670_107511371	3300005560	Soil	TRSNTLANASSYALPMVLAINTFALLALDRLGEIPSWIKSAVAVFLSF*
Ga0066703_103746281	3300005568	Soil	RGVTMNNVAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWLKSAVALFLAF*
Ga0075281_10022412	3300005897	Rice Paddy Soil	MNPIAETRANPLSIAASWTLPMLLAINTFALLALEQMGQIPAWLKSAVALFLSF*
Ga0075280_100516252	3300005904	Rice Paddy Soil	MNNIAETRTQSINVSYALPMVLAINTFAILALSQLGQIPSWIQSAVALFLSF*
Ga0066652_1000986853	3300006046	Soil	MNNVAETTRTNALSIASSYALPMLLAINTFALLALDRLGEVPSWIKSAVAVFLAF*
Ga0066665_112828651	3300006796	Soil	MNDVAETRSSALPNITVSYTLPMVLAINTFALLALDQLGQIPAWIKSAVALFL
Ga0075426_109145522	3300006903	Populus Rhizosphere	MGVTMNEVAETTRSTAITNLSSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF*
Ga0075426_109740412	3300006903	Populus Rhizosphere	MRGVTMNNVAETTRSTAISNATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLSF
Ga0075436_1015494822	3300006914	Populus Rhizosphere	MNNVAETTRSTALSNATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLSF*
Ga0099791_103752372	3300007255	Vadose Zone Soil	LNNIAETRSTALSAVTSSYTLPMVLAINTFALLAFDRLGQIPVWIKSAVALFLAF*
Ga0066710_1000567475	3300009012	Grasslands Soil	MNNVAETRSTALPAITPSYTLPMVLAINTFALLALNQLGQIPSWIKSAVALFLAF
Ga0066710_1001050514	3300009012	Grasslands Soil	MRGVTMNNVAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWLKSAVALFLAF
Ga0099829_100158592	3300009038	Vadose Zone Soil	MNNVAETRATTLSAVSTSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF*
Ga0099828_100855302	3300009089	Vadose Zone Soil	MNNVAETRTTVLPALTSSYTLPMVLAINTFALLALDRLGQIPIWIKSAVALFLAF*
Ga0099828_107660212	3300009089	Vadose Zone Soil	MNNVAETTRINTLSAASSYALPMMLVINTFALLALERLGQIPTWVKSAVALFLAF*
Ga0099827_102726642	3300009090	Vadose Zone Soil	MNNVAETRSNTISMPYALSMLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0099827_102814514	3300009090	Vadose Zone Soil	MNNVAETTRINTLSAASSYALPMMLAINTFALLALERLGQIPTWVKSAVALFLAF*
Ga0066709_10000605511	3300009137	Grasslands Soil	MNNVAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0066709_1024045511	3300009137	Grasslands Soil	AETRSTALTAVTSSYTLPMVLAINTFALLALNHLGQIPSWIKSAVSLFLAF*
Ga0114129_100986884	3300009147	Populus Rhizosphere	LNNIAETRSTALTAVTSTYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0134088_102432772	3300010304	Grasslands Soil	MRGITMNNVAETRSTALPAITPSYTLPMVLAINTFALLALNQLGQIPSWIKSAVALFLAF
Ga0134066_102570701	3300010364	Grasslands Soil	RGAIMNNVAETTRTNALSIASSYALPMLLAINTFALLALDRLGEVPSWIKSAVAVFLAF*
Ga0137392_113163142	3300011269	Vadose Zone Soil	MNNVAETRSSAISTPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0137391_100504112	3300011270	Vadose Zone Soil	MNNVAETRATTLSAVSTSYTLPMLLAINTFALLALNQLGQIPAWIKSVVALFLAF*
Ga0137389_108274461	3300012096	Vadose Zone Soil	DTLNNIAEPRSTALSAVTSSYTLPMVMAINTFALLAFDRLGQIPVWIKSAVALFLAF*
Ga0137382_107440612	3300012200	Vadose Zone Soil	MMNNVAETTRSNTLANASSYALPMVLAINTFALLALDRLGEIPSWIKSAVAVFLSF*
Ga0137382_109654871	3300012200	Vadose Zone Soil	MNNIAETRSTALPAVTSSYTLPMVLAINTFALLALDRLGQIPVWIKSAVALFLAF*
Ga0137399_107240171	3300012203	Vadose Zone Soil	LNNIAETRSTALPAVVSSYTLPMVLAINTFALLALDRLGQIPVWIKSAVALFLAF*
Ga0137374_100536564	3300012204	Vadose Zone Soil	MNNVAESSRGNILSGASSYALPMLLAINTFALLALDSLGQIPSWIKSVVALFLAF*
Ga0137380_108504541	3300012206	Vadose Zone Soil	MNNVAETTRTTALSAVSTSYTLPMLLAINTFALLALEQLGQIPAWIKSAVALFLAF*
Ga0137381_118067211	3300012207	Vadose Zone Soil	MNNIAETRSTALTAVTFSYTLPMVLAINTFALLALKQLGQIPSWIKSAV
Ga0137376_101298652	3300012208	Vadose Zone Soil	MNNVAETTRSNTLANASSYALPMVLAINTFALLALDRLGEIPSWIKSAVAVFLSF*
Ga0137376_104861531	3300012208	Vadose Zone Soil	RGDTMNNIAETRSTALSAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0137376_108687502	3300012208	Vadose Zone Soil	MNNVAETRSSSNAVSMPTTLSMMLAVNTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0137377_107405891	3300012211	Vadose Zone Soil	ETTRTTALSAVSTSYTLPMLLAINTFALLALEQLGQIPAWIKSAVALFLAF*
Ga0137377_112915261	3300012211	Vadose Zone Soil	MNNVAETRSSAISMPYVLSVLLAGNTFALLALDHLGQFPAWIKSAVALFLAF*
Ga0150985_1002868212	3300012212	Avena Fatua Rhizosphere	MNNIAETRTQSISLSYALPMVLAVNTFAILALDQLGSIPSWIKSAVELFLTF*
Ga0137370_102700113	3300012285	Vadose Zone Soil	MNNVAETTRSNTLANACSCALPMVLAINTSALLALDRLGGIPSWIKSAVAVFLSF*
Ga0137387_110990011	3300012349	Vadose Zone Soil	RSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0137372_101142644	3300012350	Vadose Zone Soil	MANIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0137367_100800393	3300012353	Vadose Zone Soil	MNNVAESSRGNVLSGASSYALPMLLAINTFALLALDSLGQIPSWIKSVVALFLAF*
Ga0137371_103296831	3300012356	Vadose Zone Soil	MNNIAETRSSALSAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF*
Ga0137390_103166582	3300012363	Vadose Zone Soil	MNDIAETRSTALTTVTSSYTLPMVLAINTFALLALEQLGQIPAWIKSAVALFLAF*
Ga0137394_105882861	3300012922	Vadose Zone Soil	MNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPTWIKSAVALFLAF*
Ga0137419_107619832	3300012925	Vadose Zone Soil	LNNIAETRSTALPAVASSYTLPMVLAINTFALLALDRLGQIPVWIKSAVALFLAF*
Ga0137410_120774101	3300012944	Vadose Zone Soil	LNNIAETRSTTLTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF
Ga0120127_100482642	3300013503	Permafrost	MNNVAETRSSTNAVSVPYMLSMMLAANTFALLALDHLGQIPAWIKSAVALFLAF*
Ga0134079_105740162	3300014166	Grasslands Soil	MNNVAETTRTNALSITSSYALPMLLAINTFALLALDRLGEVPSWIKSAVAVFLAF*
Ga0167652_10651592	3300015164	Glacier Forefield Soil	MYNVAETRTQTIGISYALPMMLAINTFTLLTLDQLGQIPSWIKSAVTLFLSF*
Ga0134089_104861652	3300015358	Grasslands Soil	TMNNVAETTRSNTLSSASSYALPMMLAINTFALLALERLGQIPAWVKSAVALFLAF*
Ga0187824_100920411	3300017927	Freshwater Sediment	MNEVAETTRSTAITNLSSYALPMLLAINTFALLAFDRLGEIPSWIKSAVAVFLAF
Ga0187809_100225692	3300017937	Freshwater Sediment	MNNVAETTRSNALSNLGSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF
Ga0187822_100675162	3300017994	Freshwater Sediment	MNEVAEITRSTAITNLSSYALPMLLAINTFALLALDRLGEIPTWIKSAVA
Ga0066655_103463922	3300018431	Grasslands Soil	MNNVAETTRSNTLSSASSYALPMMLAINTFALLALERLGQIPAWVKSAVALFLAF
Ga0066667_110873321	3300018433	Grasslands Soil	MRGVTMNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF
Ga0066662_106901452	3300018468	Grasslands Soil	MNNVAETRSTALPAITSSYTLPMVLAINTFALLALDQLGQIPVWIKSAVALFLAF
Ga0066662_106908782	3300018468	Grasslands Soil	MHDIAETTRSTALSNATSYALPMLLAINTFALLALDRLGQIPSWIKSAVALFLAF
Ga0066669_105199721	3300018482	Grasslands Soil	MNNIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF
Ga0213876_102617552	3300021384	Plant Roots	MNNIAETRTQSISLSYALPMVLAVNTFALLALDQLGSIPSWIKSAIELFLTF
Ga0210409_110765451	3300021559	Soil	MNNIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPTWIKSAVALFLAF
Ga0207684_104286022	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETRSSAISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF
Ga0207646_100641914	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETRSSVISMPYALSVLLAGNTFALLALDHLGQIPAWIKSAVALFLAF
Ga0207646_100729621	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNDVAETRSTALPTVTSSYTLPMVLAINTFALLALEQLGSIPVWIKSAVALFLAF
Ga0207646_104400492	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNNVAETTRSTQLSAATSYALPMVLAINTFALLALERLGQIPVWIKSAVAVFLAF
Ga0208527_10025874	3300025990	Rice Paddy Soil	MNPIAETRANPLSIAASWTLPMLLAINTFALLALEQMGQIPAWLKSAVALFLSF
Ga0209152_103220912	3300026325	Soil	MNNVAETRTSAISMPYALSVLLAGNTFALLALDHLGQIPAWLKSAVALFLAF
Ga0209267_12499371	3300026331	Soil	MNDVAETTRSNTLSNASSYALPMLLAINTFALLALDRAGQIPSWIKSAVALFLAF
Ga0209267_12827992	3300026331	Soil	MNNVAETRSTALPAIASSYTLPMVLAINTFALLALDQLGQIPVWIKSAVALFLAF
Ga0209648_101642232	3300026551	Grasslands Soil	MNDIAETRSTPLTTVTSSYTLPMVLAINTFALLALEQLGQIPAWIKSAVALFLAF
Ga0209626_11980502	3300027684	Forest Soil	MNNAVETRSNAMSMPYAFSMLLAGNTFALLALDHLGQIPAWIKSAVALFLAF
Ga0209689_12570052	3300027748	Soil	MNNVAETRSSSTVSMPYTLSMMLAINTFALLALDHLGQIPSWIKSAVALFLAF
Ga0209180_101462972	3300027846	Vadose Zone Soil	MNNVAETRATTLSAVSTSYTLPMLLAINTFALLALNQLGQIPAWIKSAVALFLAF
Ga0209283_104900622	3300027875	Vadose Zone Soil	MNNVAETRTTVLPALTSSYTLPMVLAINTFALLALDRLGQIPIWIKSAVALFLAF
Ga0209590_102291543	3300027882	Vadose Zone Soil	MNNVAETTRINTLSAASSYALPMMLAINTFALLALERLGQIPTWVKSAVALFLAF
Ga0209168_100736131	3300027986	Surface Soil	MNEVAETTRSTAITNLSSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF
Ga0307469_112679842	3300031720	Hardwood Forest Soil	LNNIAETRSTALTAVTSSYTLPMVLAINTFALLALEQLGQIPSWIKSAVALFLAF
Ga0307469_114643831	3300031720	Hardwood Forest Soil	MNNVAETTRSNTLSIASSYALPMLLAINTFALLALDRLGEVPSWIKSAVAVFLAF
Ga0307477_100171954	3300031753	Hardwood Forest Soil	MNDVAETTRSSTLSNASSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF
Ga0307473_109684262	3300031820	Hardwood Forest Soil	MNNVAETTRSSALSNATSYALPMLLAINTFALLALDRLGEIPSWIKSAVAVFLAF
Ga0307471_1000607565	3300032180	Hardwood Forest Soil	MNNVAETRSSSNAVSMPYTLSMMLAVNTFALLALDHLGQIPAWIKSAVALFLAF
Ga0335079_101448824	3300032783	Soil	MNNVAETTRSNALSNLGSYALPMMLAINTFALLALDRLGEIPSWIKSAVAVFLAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072148

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences