Metagenome / Metatranscriptome Family F072131

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072131
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	61 residues
Representative Sequence	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Number of Associated Samples	99
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.67 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	84.30 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.347 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.008 % of family members)
Environment Ontology (ENVO)	Unclassified (33.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.025 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.41% β-sheet: 0.00% Coil/Unstructured: 96.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF07883	Cupin_2	6.61
PF04237	YjbR	4.96
PF00903	Glyoxalase	2.48
PF07690	MFS_1	1.65
PF02518	HATPase_c	1.65
PF00005	ABC_tran	1.65
PF00211	Guanylate_cyc	1.65
PF03640	Lipoprotein_15	1.65
PF13302	Acetyltransf_3	1.65
PF00248	Aldo_ket_red	0.83
PF03466	LysR_substrate	0.83
PF01135	PCMT	0.83
PF05988	DUF899	0.83
PF00672	HAMP	0.83
PF01022	HTH_5	0.83
PF00082	Peptidase_S8	0.83
PF12681	Glyoxalase_2	0.83
PF13424	TPR_12	0.83
PF13520	AA_permease_2	0.83
PF01872	RibD_C	0.83
PF13417	GST_N_3	0.83
PF00487	FA_desaturase	0.83
PF00083	Sugar_tr	0.83
PF09948	DUF2182	0.83
PF06348	DUF1059	0.83
PF08327	AHSA1	0.83
PF02073	Peptidase_M29	0.83
PF09900	DUF2127	0.83
PF13305	TetR_C_33	0.83
PF00027	cNMP_binding	0.83
PF04261	Dyp_perox	0.83
PF01243	Putative_PNPOx	0.83
PF12680	SnoaL_2	0.83
PF08546	ApbA_C	0.83
PF08281	Sigma70_r4_2	0.83
PF00583	Acetyltransf_1	0.83
PF09391	DUF2000	0.83
PF00196	GerE	0.83
PF13561	adh_short_C2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	4.96
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.65
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.65
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.83
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.83
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.83
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.83
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.83
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	0.83
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.83
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.83
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.83
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.83
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.35 %
Unclassified	root	N/A	1.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	90.08 %
Unclassified	root	N/A	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.65 %
Unclassified	root	N/A	1.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.55 %
Unclassified	root	N/A	1.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.83 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.83 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	49.59 %
Unclassified	root	N/A	1.65 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.83 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.59 %
Unclassified	root	N/A	1.65 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.59 %
Unclassified	root	N/A	1.65 %
Actinacidiphila	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila	0.83 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.59 %
Unclassified	root	N/A	1.65 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.83 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.59 %
Unclassified	root	N/A	1.65 %
Ktedonobacter racemifer DSM 44963	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer → Ktedonobacter racemifer DSM 44963	0.83 %
Actinacidiphila soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	0.83 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.83 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118202008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300003990\|Ga0055455_10001585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3767	Open in IMG/M
3300003990\|Ga0055455_10079917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300004480\|Ga0062592_102360487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300005171\|Ga0066677_10300806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300005176\|Ga0066679_10580978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300005177\|Ga0066690_10815688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300005178\|Ga0066688_10662256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300005179\|Ga0066684_10264902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300005179\|Ga0066684_10501718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300005186\|Ga0066676_10530170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300005187\|Ga0066675_10146031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1618	Open in IMG/M
3300005332\|Ga0066388_108355725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300005341\|Ga0070691_10608724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300005435\|Ga0070714_102397922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300005444\|Ga0070694_100684641	All Organisms → cellular organisms → Bacteria → Terrabacteria group	833	Open in IMG/M
3300005450\|Ga0066682_10455738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300005471\|Ga0070698_100593652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1048	Open in IMG/M
3300005530\|Ga0070679_100978292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300005549\|Ga0070704_100514319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300005552\|Ga0066701_10052280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2248	Open in IMG/M
3300005555\|Ga0066692_10480758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300005560\|Ga0066670_10460467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300005561\|Ga0066699_11265979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300005564\|Ga0070664_100042171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3852	Open in IMG/M
3300005569\|Ga0066705_10314895	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300005574\|Ga0066694_10246854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300005576\|Ga0066708_10197480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300005587\|Ga0066654_10627805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300005616\|Ga0068852_100979208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300005893\|Ga0075278_1038356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	699	Open in IMG/M
3300006046\|Ga0066652_100912157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	838	Open in IMG/M
3300006046\|Ga0066652_101370071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300006800\|Ga0066660_10019136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3961	Open in IMG/M
3300006903\|Ga0075426_11132127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	593	Open in IMG/M
3300009012\|Ga0066710_102097260	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300009012\|Ga0066710_102699092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300009012\|Ga0066710_103253597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300009038\|Ga0099829_11389587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300009098\|Ga0105245_12157091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300009137\|Ga0066709_100054827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4539	Open in IMG/M
3300009137\|Ga0066709_102248196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300009137\|Ga0066709_102839154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300009137\|Ga0066709_103181461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300009148\|Ga0105243_11529155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300009162\|Ga0075423_10478855	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300009174\|Ga0105241_10796504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300010040\|Ga0126308_10026178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3207	Open in IMG/M
3300010145\|Ga0126321_1032163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300010333\|Ga0134080_10320524	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010335\|Ga0134063_10717052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300010335\|Ga0134063_10738005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300010375\|Ga0105239_11493656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300010398\|Ga0126383_10309806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1581	Open in IMG/M
3300012010\|Ga0120118_1173057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300012201\|Ga0137365_10057793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2929	Open in IMG/M
3300012204\|Ga0137374_10035056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5406	Open in IMG/M
3300012204\|Ga0137374_10572197	All Organisms → cellular organisms → Bacteria → Terrabacteria group	865	Open in IMG/M
3300012208\|Ga0137376_10603017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	950	Open in IMG/M
3300012212\|Ga0150985_103268362	Not Available	1041	Open in IMG/M
3300012285\|Ga0137370_10575304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012349\|Ga0137387_11041948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012350\|Ga0137372_10641606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300012354\|Ga0137366_10160555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1689	Open in IMG/M
3300012354\|Ga0137366_10708944	All Organisms → cellular organisms → Bacteria → Terrabacteria group	717	Open in IMG/M
3300012355\|Ga0137369_10462923	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M
3300012356\|Ga0137371_10019663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5200	Open in IMG/M
3300012358\|Ga0137368_10054219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3372	Open in IMG/M
3300012358\|Ga0137368_10192750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300012360\|Ga0137375_10135550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2432	Open in IMG/M
3300012360\|Ga0137375_10250795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1634	Open in IMG/M
3300012360\|Ga0137375_11087150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300012532\|Ga0137373_10904487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300012532\|Ga0137373_10968958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300012930\|Ga0137407_11534384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012951\|Ga0164300_10016941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2442	Open in IMG/M
3300012957\|Ga0164303_10660475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300012958\|Ga0164299_10203708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1146	Open in IMG/M
3300012977\|Ga0134087_10070414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1417	Open in IMG/M
3300012986\|Ga0164304_10915308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300012986\|Ga0164304_11604778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300014150\|Ga0134081_10322035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300015245\|Ga0137409_10879630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300018027\|Ga0184605_10347270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300018061\|Ga0184619_10423113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300018071\|Ga0184618_10341821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300018433\|Ga0066667_10187336	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300018433\|Ga0066667_10575001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300018482\|Ga0066669_10287577	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300021080\|Ga0210382_10322595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300021363\|Ga0193699_10072998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Actinacidiphila → Actinacidiphila soli	1357	Open in IMG/M
3300025929\|Ga0207664_10276208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300025932\|Ga0207690_11166164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300025933\|Ga0207706_10012976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7585	Open in IMG/M
3300025935\|Ga0207709_10162692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1558	Open in IMG/M
3300025945\|Ga0207679_10202091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1660	Open in IMG/M
3300026088\|Ga0207641_11271785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300026277\|Ga0209350_1166092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300026300\|Ga0209027_1167557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300026308\|Ga0209265_1044604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1372	Open in IMG/M
3300026527\|Ga0209059_1178667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300027748\|Ga0209689_1411818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300028711\|Ga0307293_10072679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300028716\|Ga0307311_10004743	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300028716\|Ga0307311_10146614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300028719\|Ga0307301_10039263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1441	Open in IMG/M
3300028720\|Ga0307317_10016110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2259	Open in IMG/M
3300028720\|Ga0307317_10105590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	935	Open in IMG/M
3300028768\|Ga0307280_10004932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3440	Open in IMG/M
3300028768\|Ga0307280_10258618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300028784\|Ga0307282_10012391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3444	Open in IMG/M
3300028784\|Ga0307282_10034039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2215	Open in IMG/M
3300028784\|Ga0307282_10299329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer → Ktedonobacter racemifer DSM 44963	775	Open in IMG/M
3300028793\|Ga0307299_10042851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1660	Open in IMG/M
3300028807\|Ga0307305_10483682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300028811\|Ga0307292_10223243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300028814\|Ga0307302_10625195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300028880\|Ga0307300_10209649	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300028884\|Ga0307308_10056130	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300034172\|Ga0334913_104547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.43%
Host-Associated	Host-Associated	11.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.64%
Plants	Host-Associated → Plants	11.57%
Aquatic	Environmental → Aquatic	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Sediment	Environmental → Aquatic → Sediment	2.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.48%
Freshwater	Environmental → Aquatic → Freshwater	1.65%
Marine	Environmental → Aquatic → Marine	1.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.73%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.48%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.83%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.83%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1182020082	3300002568	Soil	MTSDAGDHGVGGRETRRDLVVARLAQHDSGDRRALAVDPAVGAEGEAAAGRACRAGLDAD
Ga0055455_100015855	3300003990	Natural And Restored Wetlands	MTGDAIDHRGSSRETRLELVVAGLAQHDAGDRRPLAVDPADRPEGEAAAGR
Ga0055455_100799173	3300003990	Natural And Restored Wetlands	MTGDVVDHGGGGREARLDEVVAGLAEHDPGDRRLPAVDRAHGPEGEAAAGRVVRPGL
Ga0062592_1023604871	3300004480	Soil	MNGDPVDHGVRGRETRPDLVVAGLAQHDPGDRRLLAVDPADGPESKAAAGRVVRTGLDADKPVVPEQ
Ga0066677_103008061	3300005171	Soil	MTGDAVDHGVRGRETRRDLVVAGLAQHDSGDRRPLAVDPADGPEGEAAAGRVVRA
Ga0066679_105809781	3300005176	Soil	MTGDAIDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADEP
Ga0066690_108156881	3300005177	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHNPGDRRPLAVDPADGPEGEAAAGRVVGAGL
Ga0066688_106622561	3300005178	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRA
Ga0066684_102649021	3300005179	Soil	MSIWLGEYLPPCMTGYAVDHCVRSRETRRDLVGAGLAQHDPRDRRPLAVDPANGPESEAAAGRGVRAGLDAD
Ga0066684_105017182	3300005179	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDA
Ga0066676_105301701	3300005186	Soil	MTGDAVDHGVGGSETRRDQVVAGLPQHDPGDRGPLAVDPADGSEGEAAAGR
Ga0066675_101460311	3300005187	Soil	MTGDAVDHGVRGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDA
Ga0066388_1083557252	3300005332	Tropical Forest Soil	LTWRGPMTGHAVDHGVGGRERRGEAGLAQHDASDRPPLAVDPVDGTEGEAAAGRRGPAGLDADKPVVPKQSVGVAH
Ga0070691_106087242	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDAVDHGVGGRETGRDLVVARLAQHDPGDRRPLAVDPADDPEGEASTGRGG
Ga0070714_1023979221	3300005435	Agricultural Soil	MTGDAVDHGVGGRETRRDLVLAGLAQHGPGDRRPPAVDPADGPEGEAAAGR
Ga0070694_1006846412	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDAIDHGGGCRETRRDLVVAWLAQHDPGDRRPLAVDPADGPEGEAAAGRV
Ga0066682_104557381	3300005450	Soil	MTGDAIDHGVGGRETGRDPIAAGLAQNDPGDRRPLAVGPTDGAEGEAAAGRVVRAGLDADKP
Ga0070698_1005936523	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDAVDHCVGARETRRDLVVAGLSQHDPGDRRLLAVDPADGAEGEAAAGRGVRAGLDADKPVAPEQ
Ga0070679_1009782922	3300005530	Corn Rhizosphere	MTGDTVDDGVGGAETRRDLAVAGLAQYDPGDRRPFAVDPADGAEREAAAGRGGRAGLDADEPVVSEQCVGVVH
Ga0070704_1005143191	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDTVDHGVGGSETRRDLVVAGLAQHDPGDRRPLTVDPADGPEGEAAAGRGGRA
Ga0066701_100522801	3300005552	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066692_104807581	3300005555	Soil	MTGDAVDHGGGGRETGRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLD
Ga0066670_104604672	3300005560	Soil	MTGDAVDHGAGSRETRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066699_112659791	3300005561	Soil	MTGDAVDHGVRGRETRRDLVVPGLAQDNPGDRRPLAVDPAGGPEGEAAAGRVV
Ga0070664_1000421711	3300005564	Corn Rhizosphere	LPEIWDSPLTGDAIDHCVGGSEARGDLIVAGLSQHDPGDRRPLAVDPADGPEREAAAGRGGRAGLDADK
Ga0066705_103148953	3300005569	Soil	MTCDAVDHGGGGRESRDDLVVAGLAQHDPGDRRPPAVDPADGPEGEAAAGRVVGAGLDADKP
Ga0066694_102468541	3300005574	Soil	MTGDAVDHSVGGRETSRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066708_101974803	3300005576	Soil	MTVDAVDHGAGGRESRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066654_106278052	3300005587	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADEP
Ga0068852_1009792082	3300005616	Corn Rhizosphere	MTSDAVDHDVGGRETRRDPVVTELAEHDPGDRRPVTVDLADGSKGEAPPGRVRVASFDAHEPVVSEQCVGVVNVAGQRQCR
Ga0075278_10383562	3300005893	Rice Paddy Soil	MSRWKTAKWWALTGDAVDDDVGSRQTCRDPVVAGLTQHDPGDRRALAGDPADRAEGEAASGRV
Ga0066652_1009121572	3300006046	Soil	MTGDAVDHGVGGRETGRDLVVAGLAQHDPCDRRPLAVDPADGPEGEAAAGRV
Ga0066652_1013700713	3300006046	Soil	MTGDAVDHGVGGRETCRDLVVAGVSQHDPGDRRLLAVDPANGPEGEAAAGRVVRAGLDADEPVVPE
Ga0066660_100191361	3300006800	Soil	MTGDAVDHGVGSRETRRDPVVTGLAQHDPSDRRPLAVDPANCPEGEAAAGRVVRAGLD
Ga0075426_111321271	3300006903	Populus Rhizosphere	LTGDAVDHDIRSRESGRDLVVAWLSQHDSCDRCPLAVDRADGPEGEAAAR
Ga0066710_1020972602	3300009012	Grasslands Soil	MTCDAVDHGGGGRETRRDLVVAGLAQHDPGDHRPLAVDPADGPEGEAAAGRVVGAGLDA
Ga0066710_1026990921	3300009012	Grasslands Soil	MTGDAVDHGVGGRETRRDLFVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADKPV
Ga0066710_1032535972	3300009012	Grasslands Soil	MTGDAVDHGVGGRETRHDLVLAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0099829_113895871	3300009038	Vadose Zone Soil	MTGDAVDHGVGGRKTRRDLVVAGLAQHDPGDRRSLALDPADGPEGEAAAGRMVRAGLDTNEPLVAK*
Ga0105245_121570911	3300009098	Miscanthus Rhizosphere	MLWNWRSRLTADAIDHGVGRRDSCREVALAKHDPGDRRPLPVDPADGPEGEAAA
Ga0066709_1000548274	3300009137	Grasslands Soil	MTVDAVDHGAGSRETRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066709_1022481961	3300009137	Grasslands Soil	MTCDAVDHGGGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAG
Ga0066709_1028391541	3300009137	Grasslands Soil	LLQIWRSPTTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAG
Ga0066709_1031814612	3300009137	Grasslands Soil	MTGDAVDHGGSGHEARRDLVLAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0105243_115291551	3300009148	Miscanthus Rhizosphere	MTGDAVDHGVGGRETRRSLVVAGLAQNDTGDGRALAADPADGPEREASAGGVGRARLDADEPVAPEQC
Ga0075423_104788553	3300009162	Populus Rhizosphere	LLSIGYSAPAGDTVDDGVGGRETRRDPVVAGLAQHDPGDRRSPAADPADCPEGETAAGRIVRAG
Ga0105241_107965043	3300009174	Corn Rhizosphere	VPTGDAVDHGGGSRETRLDEAVAGLAQHDPGDRRPLAVDPADGTEGEAAAGRVV
Ga0126308_100261784	3300010040	Serpentine Soil	MTGDAVDHGVGGRETRRDLVVVGLAQHDPGDRRPLAADPADRLEGEAAAGRGGRAGLDADKP
Ga0126321_10321632	3300010145	Soil	MAGDAVDHGVGGRETRRDLVVAGLTQHDPGDRRPLAVDPADGPEGEAAARRGGGAGLDADKPVVSE
Ga0134080_103205242	3300010333	Grasslands Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAPAGRVVRA
Ga0134063_107170521	3300010335	Grasslands Soil	MTGDAVDHCFGGRETGRDPVVAGLAQHDPGDRRPLAVDPADGAEGEAAAGR
Ga0134063_107380051	3300010335	Grasslands Soil	LLQIWRSPTTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVGAGL
Ga0105239_114936562	3300010375	Corn Rhizosphere	LLWIRHSLLTGDAVDHGVAGRETRRDPVVAGLAQHDPGDRRPLAVDQADGAEGEAAAGGRGRAGLDA
Ga0126383_103098063	3300010398	Tropical Forest Soil	MTDYAVDQCGGGRETRFDPVVPGLAQHNPGDRRSLAVDPADGAEGEAAAGRVVRAGLDTD
Ga0120118_11730572	3300012010	Permafrost	MTGDAVDYGGSGFETRLDLILAGLAQHDPGDRRRVPSGCAVDPPDGPEGEAAAGRVVRTGLDADKPVVPEQFVCVVH
Ga0137365_100577934	3300012201	Vadose Zone Soil	LLQIWRSPTTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADK
Ga0137374_100350569	3300012204	Vadose Zone Soil	MTGDAVDQGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0137374_105721971	3300012204	Vadose Zone Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPPAVDPADGPEGEAAAGRRG
Ga0137376_106030171	3300012208	Vadose Zone Soil	MTGDAVDHRIGGRETRRNLVVAGLAQHHPGDRRPLAVDPADGPEGEAA
Ga0150985_1032683621	3300012212	Avena Fatua Rhizosphere	LLEIWRRPPTEDALDDCVGCRETRRDLVVARLAQHDPGNRRRLALDPADGAEGEAAAGG
Ga0137370_105753042	3300012285	Vadose Zone Soil	MTVDAVDHGAGGRESRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGL
Ga0137387_110419481	3300012349	Vadose Zone Soil	MTGDAVHHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGLEGEAAAGRVVGAGLDADEPLV
Ga0137372_106416061	3300012350	Vadose Zone Soil	MTGEAIDDGGGGHETGRDPVVAGLAQDDAGDRRALAVDQADGPEGEAAAGRVVRAGLDADKPVVPE
Ga0137366_101605551	3300012354	Vadose Zone Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPPAVDPADGPEGEAAAGRRGRAGLDADEPVVPEQCV
Ga0137366_107089442	3300012354	Vadose Zone Soil	MTGDAVDHGVGGRETRRDLVVAGLSQHDPGDRRPLAVDPADGPEGEAAAGR
Ga0137369_104629233	3300012355	Vadose Zone Soil	MTGDAVDHRVCSRETRLDLAGLAQHDPGDRRPLAVDPADGPEGEAAAGRGGR
Ga0137371_100196631	3300012356	Vadose Zone Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDSGDRRPLAVDPADGPEGEAAAGRVVRAGLDADKPVVPEQCV
Ga0137368_100542191	3300012358	Vadose Zone Soil	LALCSDRTGDAVDHGGGGRESRRDLVVAGLAQHDPGDRLFAVDPADGAEGEAAAGCGGRAGLDADKPVVPEQCVGV
Ga0137368_101927503	3300012358	Vadose Zone Soil	MTADAVDHGVGGRETGRDPVVAGLAQHDPGDRRPLAVDPTDGPKGEAAAGRGV
Ga0137375_101355502	3300012360	Vadose Zone Soil	MTGDAVDHGVGGRETRRDLVVAGLTQHDPGDRHPLAVDPVDGLEGEAAAGRVVRARLDTDEP
Ga0137375_102507954	3300012360	Vadose Zone Soil	MTGDAVDHGVGGLETRRDLVVAGLAQHDPGDRRPLAVDPTDGPKGEAAAGRGVRAGLDADKPVVPEQ
Ga0137375_110871502	3300012360	Vadose Zone Soil	MTDDAVDHGVGGRETRRDLVVAGLAQHDPRDRRPLAVDPADGPEGEAAAGRGVR
Ga0137373_109044871	3300012532	Vadose Zone Soil	LALCSDRTGDAVDHGGGGRESRRDLVVAGLAQHDPGDRLFAVDPADGAEGEAAAGCGGRAGLDADKPVVPEQCVG
Ga0137373_109689581	3300012532	Vadose Zone Soil	LTGDALDHGVGGRETRRDLVVPGLAQHDPGDRRPLAVDPADGPEGEAAAGR
Ga0137407_115343842	3300012930	Vadose Zone Soil	MAGDAGDHGVGCRESRRDLVVAGLAQHDPGDGRLLAVDPADGPEGKAAPGRVVRAGLDADKPVVPEQCV
Ga0164300_100169412	3300012951	Soil	MIGDAVDHRGGCRETRHDPVVAGLAQDDTGDRRPLAVDPANDPERESAAGRVVRIGLDADKPVVPKKGVGVVRVIELDARPVS*
Ga0164303_106604752	3300012957	Soil	LPEIRQNTYLALRMTGDALDHRVGGLEGCRDSVVAGLAQHDAGDRGLFAGDPANGPEGEAAAGRGVRA
Ga0164299_102037081	3300012958	Soil	MIGDAVDHRGGCRETRHDPVVAGLAQDDTGDRRPLAVDPANDPEREAAAGRVVRTGLDADKPVVPKKGVGVVRVIELDARPVS*
Ga0134087_100704141	3300012977	Grasslands Soil	MTRDAVDHGAGGLETRRDLVVAGLAQHDTGDRRPLAADPADGAEGEATAGRVVRAGLDADEPVVPEQGVGVAHG
Ga0164304_109153081	3300012986	Soil	MTGDAVDHGGGGRETGRDPVVAGLAQHDPGDRRPLAVDPANGAEREAAAGRVVRTGLDADKPVVPEQC
Ga0164304_116047781	3300012986	Soil	MTGDAVDHGVGGRETRRDPVAAGLAQHDPGDRCPLAVDPADRPEGEAAAGRGGRAGLDADKPVVPE
Ga0134081_103220351	3300014150	Grasslands Soil	VTGDALDYGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGAEGEAAAGRVGRAGL
Ga0137409_108796301	3300015245	Vadose Zone Soil	MTGDAVDHGVGRRESRREAGLAQHDPGNRRPVAVDPADGPEGETAAGLRGRAGLDARKSVVP
Ga0184605_103472701	3300018027	Groundwater Sediment	MTGDAVDHGVRGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVR
Ga0184619_104231131	3300018061	Groundwater Sediment	MTGDPIDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVHPADGPEGEAAARRVVGAGLDADKPVVPEQC
Ga0184618_103418211	3300018071	Groundwater Sediment	MTGDAVDHGVGGRETGRDPVVAGLAQHDPGDRRPLAVDPADGAEGEAAAGRGVRAGLDAD
Ga0066667_101873364	3300018433	Grasslands Soil	MTGDAVDHGVRGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0066667_105750011	3300018433	Grasslands Soil	MTGDAVDHGAGSRETRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADKP
Ga0066669_102875773	3300018482	Grasslands Soil	MTGDAVDHGAGSRETRRNTVVTGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADKPVVPEQ
Ga0210382_103225952	3300021080	Groundwater Sediment	MTGDAVDHGVRGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDADKP
Ga0193699_100729982	3300021363	Soil	MRSWLGSCRTCVSPLTGDPVDHGVRGRETRRDPVVAGLAQHDPGDRRPLAGDPADGPKGEAAAGRGIRAGLDADKRI
Ga0207685_103395462	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTGDAVDHGLGGRETRRDLVVAGLTQYDPGDRRPLAVDPADGLEGEAAAG
Ga0207664_102762081	3300025929	Agricultural Soil	VTGDAVDHGRGGVETRRDPVGAGLAQHDPGDRRPPTVDPPDGPESETATGCVVRAGLDTDEPVAPEQCVG
Ga0207690_111661642	3300025932	Corn Rhizosphere	MTGDAVDHGVGGRETRRDLVVPGLAQHDSGDRRPFAVDPADRAEGEAAARRV
Ga0207706_100129769	3300025933	Corn Rhizosphere	MTGDAVDHGVGGRETGRDLVVARLAQHNPGDRRPLAVDPADDPEGEASTGRGGRAGLDADEPVVPEQCVGVVHGAGD
Ga0207709_101626923	3300025935	Miscanthus Rhizosphere	MTGDAVDHRIGGLESRRDPVVAGLAQHDPGDRRPFAVDPADGAEGEAAAGSGGRAGLDADKPVVP
Ga0207679_102020911	3300025945	Corn Rhizosphere	LPEIWDSPLTGDAIDHCVGGSEARGDLIVAGLSQHDPGDRRPLAVDPADGPEREAAAGRG
Ga0207641_112717851	3300026088	Switchgrass Rhizosphere	MAGDAVDHGGGCRETRLDPVVAGLAQHDPGDRRPLAVDQANGPEGEAAAGRGGR
Ga0209350_11660922	3300026277	Grasslands Soil	MTGDAVDHGLGGRETGRDPVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAGLDAD
Ga0209027_11675572	3300026300	Grasslands Soil	MTGDAVDHGLGGRETGRDPVVAGLAQHDPGDRRPLAVDPADGAEREAAAGRGVRAGLDADKPVVPEQCVGVVH
Ga0209265_10446044	3300026308	Soil	MTCDAVDHRVGGRETRRDLIVAGLAQHGSGDRRRLAVDPADGTEGEAAAGRVVRAG
Ga0209059_11786672	3300026527	Soil	MTRDAVDHGVGGRETRRDLIVAGLAQHDSGDRRRLAVDPADGTEGEAAAGRVVRAGLDA
Ga0209689_14118181	3300027748	Soil	MTGDAIDHGGSGRETRRDLVVAGLAQHDPGDRRPLAMDPADRPEGEAAAGRLVRAGLDTDEPVVAEQC
Ga0307293_100726791	3300028711	Soil	MTGDAVDHGVGGRETRRDPVVAGLAQHDPGDRRLLAVDPADSPEGEAAAGRVVRAGLDADKPV
Ga0307311_100047431	3300028716	Soil	MTGDAVDHGGGCREARRDPVVAGLAQYDAGDRRSLAVDPADGPEGEAAAGR
Ga0307311_101466142	3300028716	Soil	MTGDAVDHGVGGRETGRDPVVAGLAQHDPGDRRPLAVDPTDGAEGEAAAGRGVRAGLDADKPV
Ga0307301_100392633	3300028719	Soil	MTGDAVDHAVGGRETGRDPVAAGLAQHDPGDRRPLAVDPADGAEGEAAAGRGVRAG
Ga0307317_100161103	3300028720	Soil	MTGDAVDHGVGGRETRRDPVVAGLAQHDPGDSRLLAVDPADSPEGEAAAGRVVRAGLDTDKPVVPEQSVGVE
Ga0307317_101055903	3300028720	Soil	MTGDAVDHGVGGRETGRDPVVAGLAQHDPGDRRPLAVDPADGAEGEAAAGRGIRAGL
Ga0307280_100049325	3300028768	Soil	MTGDAVDHGDGCRETRRDSVVAGLAQHDPGDRRLLAVDPADSPEGEAAAGRVVRA
Ga0307280_102586181	3300028768	Soil	MTGDAVDHRVDGRETRRDPVVAGLAQHDPGDRGPLAVDPANGPEGEAAAGSVVR
Ga0307282_100123914	3300028784	Soil	MTGDAVNHGVGGRETCRDLVVAGLAQHDPRDCRPLAVDPADGPEGEAAAGRVV
Ga0307282_100340391	3300028784	Soil	MTGDAVDHGVGGRETRRDPVVAGLAQHDPGDRRLLAVDPVDSPKGEAAAGRVVRAGL
Ga0307282_102993292	3300028784	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADRPEGEAAAGRVVRAGLDADKPVVPEQRVGVV
Ga0307299_100428513	3300028793	Soil	MTGDAVDHRVGGRETRRDPVVAGLPQHDPGDRRPLAVDPADGSEREAAAGRGVRAGLDADKPVVAEQC
Ga0307305_104836821	3300028807	Soil	MTGDAVDHGGGCRETRRDPVVAGLSQYDPGDRRPLGVDPANGPEGEAAAGRVVRAGLDADKPVVSEQGVG
Ga0307292_102232431	3300028811	Soil	MTGDAVDHGVGGRETGRNPVVAGLAQHDPGDRRPLAVDPADGAEGEAAAGRGVRAGLDADKP
Ga0307302_106251952	3300028814	Soil	MTGDAVDHGGGCRETRRDLVVAGLAQHDAGNRRPLAVGQADGQEGEAAAGGVVRAGLDADKPVLPE
Ga0307300_102096492	3300028880	Soil	MTGDAVDHGVGGRETRLDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGGVVRAGLDAD
Ga0307308_100561303	3300028884	Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRVVRAR
Ga0334913_104547_1_186	3300034172	Sub-Biocrust Soil	MTGDAVDHGVGGRETRRDLVVAGLAQHDPGDRRPLAVDPADGPEGEAAAGRGGRAGLDADKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072131

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences