Metagenome Family F072105

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072105
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	66 residues
Representative Sequence	LQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS
Number of Associated Samples	108
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.50 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (24.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.322 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.27% β-sheet: 2.20% Coil/Unstructured: 72.53%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF09084	NMT1	52.89
PF01541	GIY-YIG	8.26
PF03070	TENA_THI-4	2.48
PF13911	AhpC-TSA_2	1.65
PF00596	Aldolase_II	1.65
PF13379	NMT1_2	1.65
PF05977	MFS_3	1.65
PF13416	SBP_bac_8	0.83
PF13751	DDE_Tnp_1_6	0.83
PF00903	Glyoxalase	0.83
PF00528	BPD_transp_1	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	52.89
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	52.89
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	1.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.17 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.37 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.65 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	48.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.31 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.65 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	48.76 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.48 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	1.65 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	48.76 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2.48 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	1.65 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	47.93 %
Stagnimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas	2.48 %
Candidatus Scalinduaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae	1.65 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.83 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	47.93 %
Stagnimonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica	2.48 %
Candidatus Scalindua	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua	1.65 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.83 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.83 %
Unclassified	root	N/A	0.83 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	47.93 %
Stagnimonas aquatica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica	2.48 %
Candidatus Scalindua rubra	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	1.65 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	0.83 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.83 %
Unclassified	root	N/A	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig847529	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
2199352025\|deepsgr__Contig_10395	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
2209111006\|2214800810	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300000574\|JGI1357J11328_10169867	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300001536\|A1565W1_10247906	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300001538\|A10PFW1_10066715	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300004114\|Ga0062593_101738749	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300004156\|Ga0062589_102803376	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300004157\|Ga0062590_100657973	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300004463\|Ga0063356_101124908	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300004463\|Ga0063356_102649580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300004479\|Ga0062595_100855920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	758	Open in IMG/M
3300004643\|Ga0062591_101255544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica	725	Open in IMG/M
3300004643\|Ga0062591_102112924	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	583	Open in IMG/M
3300004779\|Ga0062380_10200302	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300004782\|Ga0062382_10130255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1043	Open in IMG/M
3300005171\|Ga0066677_10451770	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300005174\|Ga0066680_10678667	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005177\|Ga0066690_10827407	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005332\|Ga0066388_106431769	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005332\|Ga0066388_107293189	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005332\|Ga0066388_107421526	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005339\|Ga0070660_100843579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300005345\|Ga0070692_10655415	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300005440\|Ga0070705_101777383	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300005444\|Ga0070694_100213405	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005444\|Ga0070694_101176375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300005445\|Ga0070708_102264716	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005458\|Ga0070681_10011150	All Organisms → cellular organisms → Bacteria	8893	Open in IMG/M
3300005458\|Ga0070681_11781901	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005467\|Ga0070706_102140357	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005536\|Ga0070697_101972837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300005536\|Ga0070697_102020760	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005544\|Ga0070686_100948609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300005545\|Ga0070695_100501710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300005546\|Ga0070696_100106931	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300005549\|Ga0070704_100741467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	874	Open in IMG/M
3300005568\|Ga0066703_10436281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	786	Open in IMG/M
3300005574\|Ga0066694_10006484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4832	Open in IMG/M
3300005598\|Ga0066706_11151365	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005614\|Ga0068856_100663341	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300005617\|Ga0068859_102083246	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005764\|Ga0066903_104778947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300005764\|Ga0066903_108841154	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005829\|Ga0074479_10277655	All Organisms → cellular organisms → Bacteria	3825	Open in IMG/M
3300005843\|Ga0068860_101852538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300005844\|Ga0068862_101066683	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006804\|Ga0079221_10329296	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006844\|Ga0075428_100553006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_60_19	1230	Open in IMG/M
3300006871\|Ga0075434_100854129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	926	Open in IMG/M
3300009093\|Ga0105240_10833152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	997	Open in IMG/M
3300009094\|Ga0111539_10514935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1394	Open in IMG/M
3300009100\|Ga0075418_12896002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300009137\|Ga0066709_103653153	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300009148\|Ga0105243_10490255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1162	Open in IMG/M
3300009148\|Ga0105243_12485611	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300009162\|Ga0075423_10400191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1441	Open in IMG/M
3300009162\|Ga0075423_12880591	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009678\|Ga0105252_10113199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300009777\|Ga0105164_10061231	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300009777\|Ga0105164_10283130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	829	Open in IMG/M
3300010047\|Ga0126382_10690324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300010325\|Ga0134064_10239917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300010358\|Ga0126370_10767721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300010361\|Ga0126378_10388957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1506	Open in IMG/M
3300010362\|Ga0126377_12324859	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	612	Open in IMG/M
3300010373\|Ga0134128_10953064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	949	Open in IMG/M
3300010397\|Ga0134124_11745994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300011444\|Ga0137463_1172465	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300012096\|Ga0137389_11449237	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300012198\|Ga0137364_10005645	All Organisms → cellular organisms → Bacteria	6727	Open in IMG/M
3300012200\|Ga0137382_10003016	All Organisms → cellular organisms → Bacteria	7822	Open in IMG/M
3300012211\|Ga0137377_11629017	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300012349\|Ga0137387_10407365	All Organisms → cellular organisms → Bacteria → Proteobacteria	986	Open in IMG/M
3300012354\|Ga0137366_10594353	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300012498\|Ga0157345_1059339	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012918\|Ga0137396_10520338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300012925\|Ga0137419_11585048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	556	Open in IMG/M
3300012986\|Ga0164304_11344710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300013297\|Ga0157378_10470659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1250	Open in IMG/M
3300013306\|Ga0163162_11545119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300014745\|Ga0157377_10227571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1197	Open in IMG/M
3300015264\|Ga0137403_10374895	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300015374\|Ga0132255_104763583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300016319\|Ga0182033_10610984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	948	Open in IMG/M
3300016387\|Ga0182040_11491266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300018028\|Ga0184608_10445361	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300018074\|Ga0184640_10043320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1838	Open in IMG/M
3300018074\|Ga0184640_10464337	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018084\|Ga0184629_10679963	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018433\|Ga0066667_10750030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	824	Open in IMG/M
3300018465\|Ga0190269_11460417	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300018468\|Ga0066662_10486108	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300018482\|Ga0066669_11974917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300025931\|Ga0207644_11809958	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025944\|Ga0207661_11256041	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300026095\|Ga0207676_10457936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1204	Open in IMG/M
3300026309\|Ga0209055_1208654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica	597	Open in IMG/M
3300026524\|Ga0209690_1016458	All Organisms → cellular organisms → Bacteria	3816	Open in IMG/M
3300026547\|Ga0209156_10011375	All Organisms → cellular organisms → Bacteria	5779	Open in IMG/M
3300027725\|Ga0209178_1118400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	896	Open in IMG/M
3300027765\|Ga0209073_10065116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1227	Open in IMG/M
3300027775\|Ga0209177_10128183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300027775\|Ga0209177_10249287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300027815\|Ga0209726_10266195	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031573\|Ga0310915_10515019	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	850	Open in IMG/M
3300031720\|Ga0307469_11601268	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031740\|Ga0307468_101488694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300031910\|Ga0306923_12198698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300031995\|Ga0307409_102701767	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300032001\|Ga0306922_10099019	All Organisms → cellular organisms → Bacteria	3082	Open in IMG/M
3300032035\|Ga0310911_10769106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300032075\|Ga0310890_11028548	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Scalinduaceae → Candidatus Scalindua → Candidatus Scalindua rubra	664	Open in IMG/M
3300032122\|Ga0310895_10612007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Stagnimonas → Stagnimonas aquatica	559	Open in IMG/M
3300032180\|Ga0307471_101231334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	912	Open in IMG/M
3300032421\|Ga0310812_10361855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300032829\|Ga0335070_10308309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1532	Open in IMG/M
3300032892\|Ga0335081_10520087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1491	Open in IMG/M
3300033158\|Ga0335077_11514022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300034150\|Ga0364933_178744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.51%
Host-Associated	Host-Associated	21.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.77%
Plants	Host-Associated → Plants	21.49%
Aquatic	Environmental → Aquatic	10.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Sediment	Environmental → Aquatic → Sediment	5.79%
Freshwater	Environmental → Aquatic → Freshwater	4.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.11%
Loam	Environmental → Terrestrial → Soil → Loam	17.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.65%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	1.65%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	1.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_07765450	2124908045	Soil	VHSDANDEHGDINEAILTKYCVSQELQEKALDAARFRWENQEARHDIIYRYFVLGAS
deepsgr_01607630	2199352025	Soil	LNEGEALLRHYGIPEDALLFYHVHSDANDEHGDINEAIXXXYCVSADLQERALAAARFRWDNQETRHDIIYRYFALAEN
2213830336	2209111006	Arabidopsis Rhizosphere	DANDEHGNINEAILKKYCISAEQQEKALAAARFRWENQEARNDIVYRYFVLGEN
JGI1357J11328_101698671	3300000574	Groundwater	ALLFFNVHSDANDEHGDINEAILRKYCVSAEQRQKALAAARFRWENQETRSDIIYRYFVLGENE*
A1565W1_102479062	3300001536	Permafrost	VDLPGEGKALKLHYGLPDEALEFYHVHGDANDEHGDICEGVLRRWCTTAELQRKALDAARFRWDNHEARQDIIYHYFIR*
A10PFW1_100667151	3300001538	Permafrost	PKEEHHDTALPSEGKALMLHYGLPEDALQFYFVHGDANDEHGDICEDILKRYCTTREQQRKALEAARFRWANHEARQDIIVEYFVR*
Ga0062593_1017387493	3300004114	Soil	GEGEALVQYYGLPRDALLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0062589_1028033761	3300004156	Soil	KEEGLLNEGAALARHYGLPDDALLFYHVHSDANDEHGDINEAILKKYCVTAEQQEKALAAARFRWENQETRADIIYKYFVLGEPR*
Ga0062590_1006579732	3300004157	Soil	EALVRHYGLPRDALLFYDVHSDANDDHGNINEAILKNYCVSVEQQERALAAARFRWENQEARSDIVYRYFVLDQS*
Ga0063356_1011249081	3300004463	Arabidopsis Thaliana Rhizosphere	GEAWTRHYGLPKDALLFFNVHSDANDEHGDINEAILIKYCLTAEQQQKALAAARFRWENQETRSDIIYRYFVVGESWN*
Ga0063356_1026495802	3300004463	Arabidopsis Thaliana Rhizosphere	NDEHGNICENILKQYCTTKELQRRALAAARFRWENHETRHDIVYRYFVLGQD*
Ga0062595_1008559202	3300004479	Soil	YNVHSDANDEHGDINEAILKNYCVSAEQQEQAFAAARFRWENQEARTDIMYRYLVLGEN*
Ga0062591_1012555441	3300004643	Soil	INEAILKKYCLTVEQQQKAVEAARFRWENQETRSDIIYRYFVVGES*
Ga0062591_1021129242	3300004643	Soil	GDINEAILKKYCLTAEQQRSALAAARFRWENQETRSDIIYRYFVVGES*
Ga0062380_102003023	3300004779	Wetland Sediment	HSDANDDHGNINEAILKKYCITAEQQQKALAAARFRWENQEARSDIIYKYFVAGEGA*
Ga0062382_101302553	3300004782	Wetland Sediment	WTRHYGLPKDALLFFNVHSDANDDHGNINEAILKKYCITAEQQQKALAAARFRWENQEARSDIIYKYFVAGEGA*
Ga0066677_104517701	3300005171	Soil	HSDANDEHGDINEAILKKYCTSAELQQKALAAARFRWENQETRHDIIHRYFVLGENG*
Ga0066680_106786671	3300005174	Soil	EALSQHYGLAEEALQFYHVHSDANDEHGDINEAILKRYCVSRELQKKALDAARFRWENQETRHDIIYRYFVLGAS*
Ga0066690_108274072	3300005177	Soil	LQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0066388_1064317691	3300005332	Tropical Forest Soil	HEGEALRHHYGLPKDALQFYHVHSDANDEHGDINEAILKKYCLSPELREKALDAARFRWENQETRHDIIYRYFVFGTT*
Ga0066388_1072931892	3300005332	Tropical Forest Soil	GLPKDALQFYHVHSDANDEHGDINEAILKKYCLSPELQEKALDAARFRWENQETRHDIIYRYFVLGTI*
Ga0066388_1074215261	3300005332	Tropical Forest Soil	VHSDANDEHGDINEAILKKYCLSQELQEKALAAARFRWENQETRHDIIYRYFVLGTT*
Ga0070660_1008435791	3300005339	Corn Rhizosphere	RDALLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0070692_106554151	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RAALLFYHVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0070705_1017773831	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GEAMARYYGLPRAALLFYHVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0070694_1002134051	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PRAALLFYHVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0070694_1011763751	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GNINEAILKNYCVSVEQQERALAAARFRWENQEARSDIVYRYFVLDQS*
Ga0070708_1022647161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	REEGLLDEGEALRRHYGLSQEALQFYHVHSDANDEHGDINEAILKQYCVSEELQEKALAAARFRWENQETRHDIIYRYFVLGAS*
Ga0070681_1001115011	3300005458	Corn Rhizosphere	ANDDHGNINEAILKNYCVSVEQQERALAAARFRWENQEARSDIVYRYFVLDQS*
Ga0070681_117819011	3300005458	Corn Rhizosphere	ANDDHGNINEAILKNYCVSVEQQERALAAARFRWENQEARSDIIYQYFVLA*
Ga0070706_1021403571	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EDGLLGEGEALMRHYGLTQDALIFYHVHSDANDEHGDINEGILKKYCTTVELQEKALAAARFRWENQETRSDIVYRYFVLDEK*
Ga0070697_1019728371	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DINEGILKKYCTTVELQEKALAAARFRWENQETRSDIVYRYFVLDEK*
Ga0070697_1020207601	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	HVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0070686_1009486091	3300005544	Switchgrass Rhizosphere	HGNINEAILKKYCISAEQQEKALAAARFRWENQEARNDIIYRYFVVGES*
Ga0070695_1005017101	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	SDANDDHGNINEAILKNYCVSVEQQERALAAARFRWENQEARSDIIYQYFVLA*
Ga0070696_1001069313	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LPRAALLFYHVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0070704_1007414671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HSDANDEHGNINEAILKKYCVSVEQQEQALAAARFRWENQEARSDIVYRYFVLDQS*
Ga0066703_104362811	3300005568	Soil	LPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0066694_100064847	3300005574	Soil	QEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0066706_111513652	3300005598	Soil	ALQFYHVHSDANDEHGDINEAILRKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0068856_1006633413	3300005614	Corn Rhizosphere	EEGLLGEGEALVRHYGLPNDALLFYNVHSDANDEHGNINEAILKKYCVSVVQQQQALAAARFRWENQEARSDIIYQYFVLA*
Ga0068859_1020832461	3300005617	Switchgrass Rhizosphere	VHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0066903_1047789471	3300005764	Tropical Forest Soil	ANDEHGDINEAILKRYCLSQELQEKALDAARFRWENQETRHDIIYRYFVLGTG*
Ga0066903_1088411541	3300005764	Tropical Forest Soil	VHGDANDEHGDICETILKKYCTTREQQRAALAAARFRWEQHEARHDIVYRYFALAT*
Ga0074479_102776554	3300005829	Sediment (Intertidal)	YGLPKDALLFFNVHSDANDEHGDINEAILKKYCLSAEQQQKALAAARFRWENQETRSDIIFRYFVLGES*
Ga0068860_1018525381	3300005843	Switchgrass Rhizosphere	HGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0068862_1010666832	3300005844	Switchgrass Rhizosphere	HYYGLPQAALLFYHVHSDANDEHGDINEAILKKYCTTPELQDKALAAARFRWENQETRHDIVYRYFVANEN*
Ga0079221_103292961	3300006804	Agricultural Soil	LPKDALLFYNVHSDANDEHGNINEAILKEYCVSVEQQEQALAAARFRWENQEARSDIVYRYFVLDQS*
Ga0075428_1005530061	3300006844	Populus Rhizosphere	EHGAHDFLPEGEALKTYYGVPDEALEFYYVHGDANDEHGDICETILKEYCTTREQQRAALAAARFRWEQHEARHDIVYRYFALAT*
Ga0075431_1001503341	3300006847	Populus Rhizosphere	ICETILKEYCTTREQQRAALAAARFRWEQHEARHDIVYRYFALAT*
Ga0075434_1008541291	3300006871	Populus Rhizosphere	DANDEHGDINEAILKKYCVSADLQERALAAARFRWENQETRHDIIYRYFALAEN*
Ga0105240_108331521	3300009093	Corn Rhizosphere	LLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA
Ga0111539_105149351	3300009094	Populus Rhizosphere	HGNINEAILKKYCVSVVQQQQALAAARFRWENQEARSDIIYRYFVLDESA*
Ga0075418_128960022	3300009100	Populus Rhizosphere	ALRQHYGLPEEALQFYHVHSDANDEHGDINEAILKKYCVSQELQEKALDAARFRWENQETRHDIIYRYFVLGAS*
Ga0066709_1036531531	3300009137	Grasslands Soil	SDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0105243_104902553	3300009148	Miscanthus Rhizosphere	EEGLLGEGEALVRYYGLPRDVLLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0105243_124856111	3300009148	Miscanthus Rhizosphere	KEDGLLNEGEALLRHYGIPEDALLFYHVHSDANDEHGDINEAILKKYCVSADLQERALAAARFRWDNQETRHDIIYRYFVLAEN*
Ga0075423_104001912	3300009162	Populus Rhizosphere	INEAILKNFCVSAEQQEKALAAARFRWENQEARSDIIYRYFVLSES*
Ga0075423_128805912	3300009162	Populus Rhizosphere	LLPEGEALRQHFGLPEEALQFYHVHSDANDEHGDINEAILTKYCVSQELQEKALDAARFRWENQEARHDIIYRYFVLGAS*
Ga0105252_101131992	3300009678	Soil	PKDALLFFNVHSDANDEHGDINEAILKKYCLTAEQQQKALAAARFRWENQETRSDIIYRYFVVGESC*
Ga0105164_100612311	3300009777	Wastewater	EGLLREGEALRRHYGLPEEALQFYHVHSDANDEHGDINENILKKFCVTKELQRNALAAARFRWDNQETRHDIIYRYFVLGQS*
Ga0105164_102831301	3300009777	Wastewater	EGLLREGEALRRHYGLPEEALQFYHVHSDANDEHGDINENILKKFCVTRELQRNALAAARFRWDNQETRHDIVYRYFVLGEG*
Ga0126382_106903242	3300010047	Tropical Forest Soil	HYGLPEGALQFYHVHSDANDEHGDINEAILKKYCLSQELQEKALDAARFRWENQETRHDIIYRYFVLGTT*
Ga0134064_102399171	3300010325	Grasslands Soil	MQRHCGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQAKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0126370_107677211	3300010358	Tropical Forest Soil	HEGEALRQHYGLPEEALQFYHVHSDANDAHGDINEAILKRYCLSQELQEKALDAARFRWENQETRHDIIYRYFVLGAS*
Ga0126378_103889573	3300010361	Tropical Forest Soil	YHVHSDANDEHGNINEAILEKYCVSTKQREKALAAARFRWENQEARNDIIYRYFVAGES*
Ga0126377_123248591	3300010362	Tropical Forest Soil	LLHEGEALRQHYGLPEGALQFYHVHSDANDEHGDINEAILKKYCLSQELQEKALDAARFRWENQETRHDIIYRYFVLGTS*
Ga0134128_109530642	3300010373	Terrestrial Soil	GEGEALVRYYGLPRDVLLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0134124_117459942	3300010397	Terrestrial Soil	PNDALLFYNVHSDANDEHGNINEAILKKYCVSVVQQQQALAAARFRWENQEARSDIIYRYFVLDESA*
Ga0137463_11724651	3300011444	Soil	HSDANDEHGDINEAILNKYCVTQEQQEKALAAARFRWENQETRSDIIYRYFVLAER*
Ga0137389_114492371	3300012096	Vadose Zone Soil	GMWRRYTPRDEHGAHDFLPEGEALKTYYGVPDEALEFYYVHGDANDEHGDICESILKQYCTTREQQRAALAAARFRWEQHEARHDIVYRYFALGT*
Ga0137364_100056451	3300012198	Vadose Zone Soil	GLPQEALQFYHVHSDANDEHGDINEAILKKYCVAAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0137382_100030161	3300012200	Vadose Zone Soil	NDALLFYHVHSDANDEHGDINEAILKKYCVTAEAQEKALAAARFRWENQETRSDIVYRYFVLGEN*
Ga0137377_116290172	3300012211	Vadose Zone Soil	EEAMERHYGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0137387_104073653	3300012349	Vadose Zone Soil	YGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0137366_105943531	3300012354	Vadose Zone Soil	HSDANDEHGDINEAILKKYCVAAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS*
Ga0157345_10593392	3300012498	Arabidopsis Rhizosphere	LLFYHVHSDANDEHGDINEAILKKYCVSADMQERALAAARFRWDNQETRHDIIYRYCAL
Ga0137396_105203381	3300012918	Vadose Zone Soil	YGLTQDALIFYHVHSDANDEHGDINEGILKKYCTTVELQEKALAAARFRWENQETRSDIVYRYFVLDEK*
Ga0137419_115850482	3300012925	Vadose Zone Soil	YHVHSDANDEHGDINEAILKKYCLTAELQEKALAAARFRWENQETRHDIIYRYLVLGEQR
Ga0164304_113447101	3300012986	Soil	HGDINEAILKKYCVSADLQERALAAARFRWENQETRHDIIYRYCALAEN*
Ga0157378_104706592	3300013297	Miscanthus Rhizosphere	NEGEALLRHYGIPEDALLFYHVHSDANAEHGDINEAILKKYCVSADLQERALAEARFRWENQETRHDIIYRYCALAEN*
Ga0163162_115451191	3300013306	Switchgrass Rhizosphere	HYGIPEDALLFYHVHSDANDEHGDINEAILKKYCVSADLQERALAAARFRWENQETRHDIIYRYFALAEN*
Ga0157377_102275711	3300014745	Miscanthus Rhizosphere	GLLGEGEALVQYYGLPRDALLFYNVHSDANDDHGDINEAILKKYCISVEQQEQALAAARFRWENQEARSDIIYQYFVLA*
Ga0137403_103748952	3300015264	Vadose Zone Soil	MRHYGLTQDALIFYHVHSDANDEHGDINEAILKKYCTTVELQEKALAAARFRWENQETRSDIVYRYFVLDEK*
Ga0132255_1047635832	3300015374	Arabidopsis Rhizosphere	EDALLFYHVHSDANDEHGDINEAILKKYCVSADLQERALAAARFRWENQETRADIIYRYFALAAN*
Ga0182033_106109842	3300016319	Soil	FYHVHSDANDEHGDINEAILKQYCVSGELQEKALAAARFRWENQETRHDIIYRYFVLGAS
Ga0182040_114912662	3300016387	Soil	EALQFYHVHSDANDEHGDINEAILKQYCVSGELQEKALAAARFRWENQETRHDIIYRYFVLGAS
Ga0184608_104453612	3300018028	Groundwater Sediment	LPEEALQFYHVHSDANDEHGDINEAILKRYCVSRELQDKALDAARFRWENQETRHDIIYRYFVLSTS
Ga0184640_100433201	3300018074	Groundwater Sediment	ANFLGEGEALKQYYGLKDVDLEFHFVHSDANDEHGDICENILKQYCVTKELQRRALAAARFRWENHETRHGIVYRYFVLGQD
Ga0184640_104643372	3300018074	Groundwater Sediment	ANFLGEGEALKQYYGLKDVDLEFHFVHSDANDEHGDICENILKQYCATKELQRRALAAARFRWENHETRHDIVYRYFVLGQD
Ga0184629_106799632	3300018084	Groundwater Sediment	FPKDALLFYNVHSDANDEHGDINEAILKKYCVNAEQQQMALAAARFRWENQETRHDITYRYFVLAESS
Ga0066667_107500302	3300018433	Grasslands Soil	DEHGDINEAILKRYCVSRELQKKALDAARFRWENQETRHDIIYRYFVLGAS
Ga0190269_114604171	3300018465	Soil	NDEHGDINEAILKKYCLSVEQQQKALAAARFRWENQETRSDIIYRYFVAGES
Ga0066662_104861081	3300018468	Grasslands Soil	MERHYGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS
Ga0066669_119749171	3300018482	Grasslands Soil	HVHSDANDEHGDINEGILKKYCTTVELQEKALAAARFRWENQETRSDSVYRYFVLDEK
Ga0207644_118099582	3300025931	Switchgrass Rhizosphere	NEAILKNYCVSVEQQERALAAARFRWENQEARSDIVYRYFVLYQS
Ga0207661_112560412	3300025944	Corn Rhizosphere	GEGEALVRHYGLPNDALLFYNVHSDANDEHGNINEAILKKYCVSVEQQQQALAAARFRWENQEARSDIIYRYFVLDESA
Ga0207676_104579362	3300026095	Switchgrass Rhizosphere	ARYYGLPRAALLFYHVHSDANDEHGDINEAILKKYCTTPELQEKALAAARFRWENQETRHDIVYRYFVANEN
Ga0209055_12086542	3300026309	Soil	ANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS
Ga0209690_10164586	3300026524	Soil	DEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS
Ga0209156_100113758	3300026547	Soil	YGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAELQEKALAAARFRWENQETRHDIIYRYFVLGGNS
Ga0209178_11184002	3300027725	Agricultural Soil	LLFYDVHSDANDEHGNINEAILKEYCVSVEQQEQALAAARFRWENQEARSDIVYRYFVLDQS
Ga0209073_100651162	3300027765	Agricultural Soil	NDEHGNINEAILKKYCVSVEQQEQALAAARFRWENQEARSDIVYRYFVLGEN
Ga0209177_101281832	3300027775	Agricultural Soil	HYGLPKDALLFYNVHSDANDEHGNINEAILKKYCISAEQQEKALAAARFRWENQEARSDIIYRYFVLGEN
Ga0209177_102492872	3300027775	Agricultural Soil	VHSDANDEHGNINEAILKKYCVSVEQQEQALAAARFRWENQEARSDIVYRYFVLDQS
Ga0209726_102661951	3300027815	Groundwater	TRHYGLPKDALLFFNVHSDANDEHGDINEAILRKYCVSAEQRQKALAAARFRWENQETRSDIIYRYFVLGENE
Ga0310915_105150192	3300031573	Soil	GEALVRHYGLSTDALLFYHVHSDANDEHGNINEAILKKYCISAVQQKKALAAARFRWENQEARNDIIYRYFVVGES
Ga0307469_116012681	3300031720	Hardwood Forest Soil	LRRHYGIPEDALLFYHVHSDANDEHGDINEAILKKYCVSADLQERALAAARFRWDNQETRHDIIYRYFVLGESVQ
Ga0307468_1014886942	3300031740	Hardwood Forest Soil	QFYYVHSDANDEHGDINEAILKQYCVSQEFQEKALAAARFRWENQETRHDIIYRYFILGA
Ga0306923_121986981	3300031910	Soil	LRRHYGLSQEALQFYHVHSDANDEHGDINEAILKQYCVSGELQEKALAAARFRWENQETRHDIIYRYFVLGAS
Ga0307409_1027017671	3300031995	Rhizosphere	EHGDINEAILKKYCLTAEQQQKALAAARFRWENQETRSDIIYRYFVAGES
Ga0306922_100990194	3300032001	Soil	HCNINETILKKYCISAEQQEKALAAARFRWENQEARNDIIYRYFVVGES
Ga0310911_107691061	3300032035	Soil	YHVHSDANDEHGDINEAILKQYRVSGELQEKALAAARFRWENQETRHDIIYRYFVLGAS
Ga0310890_110285481	3300032075	Soil	GLPKDALLFFHVHSDANDEHGDINEAILKKYCLTAEQQQKALAAAGFRWENQETRSDIIYRYFVAVES
Ga0310895_106120071	3300032122	Soil	HVHSDANDEHGDINEAILKKYCLTAEQQQKALAAARFRWENQETRSDIIYRYFVVGES
Ga0307471_1012313341	3300032180	Hardwood Forest Soil	EGEALMRHYGLTQDALIFYHVHSDANDEHGDINEGILKKYCTTVELQEKALAAARFRWENQETRSDIVYRYFVLDEK
Ga0310812_103618551	3300032421	Soil	LLGEGEAWTRHYGLPKDALLFFNVHSDANDEHGDINEAILKKYCVTAEQQEKALAAARFRWENQETRADIIYKYFVLGEPR
Ga0335070_103083091	3300032829	Soil	EAMARYYGLPRETLLFYHVHSDANDEHGDINEAILRKYCTGAELQEKALAAARFRWENQETRHDIIYRYFVASED
Ga0335081_105200871	3300032892	Soil	LGEGEALARHYGLPQEALQFYHVHSDANDEHGDINEAILKKYCVTAEQQEKALAAARFRWENQETRHDIIYRYFVLGQC
Ga0335077_115140222	3300033158	Soil	DEHGDINEAILKQYCVTEELQEKALAAARFRWENQETRHDIIYRYFVLGAS
Ga0364933_178744_5_178	3300034150	Sediment	VHSDANDEHGDINEAILKKYCVSADLQERALAAARFRWDNQETRHDIIYRYCALAEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences