Metagenome / Metatranscriptome Family F072065

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	112 residues
Representative Sequence	MKGLILPVLAIAALAACASANKYARWPYRGPMLMVTNPTQNRLVVMARDGAGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR
Number of Associated Samples	100
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.86 %
% of genes near scaffold ends (potentially truncated)	24.79 %
% of genes from short scaffolds (< 2000 bps)	71.90 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.529 % of family members)
Environment Ontology (ENVO)	Unclassified (26.446 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.149 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 13.89% β-sheet: 15.97% Coil/Unstructured: 70.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01546	Peptidase_M20	19.83
PF00326	Peptidase_S9	14.05
PF13484	Fer4_16	11.57
PF07687	M20_dimer	9.92
PF12706	Lactamase_B_2	1.65
PF03641	Lysine_decarbox	1.65
PF00486	Trans_reg_C	0.83
PF07690	MFS_1	0.83
PF10502	Peptidase_S26	0.83
PF06245	DUF1015	0.83
PF01592	NifU_N	0.83
PF00266	Aminotran_5	0.83
PF08281	Sigma70_r4_2	0.83
PF08331	QueG_DUF1730	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	1.65
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1600	Epoxyqueuosine reductase QueG (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.83
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	68.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	68.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	66.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.83 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	66.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.83 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	66.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	66.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	66.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.65 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.83 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.83 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001086\|JGI12709J13192_1001638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3275	Open in IMG/M
3300003319\|soilL2_10126766	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300004780\|Ga0062378_10069280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	815	Open in IMG/M
3300004799\|Ga0058863_11284302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300004803\|Ga0058862_11193061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300004808\|Ga0062381_10116415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300005171\|Ga0066677_10076293	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1732	Open in IMG/M
3300005171\|Ga0066677_10450296	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	737	Open in IMG/M
3300005171\|Ga0066677_10495683	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	702	Open in IMG/M
3300005175\|Ga0066673_10332177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	887	Open in IMG/M
3300005175\|Ga0066673_10417347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	786	Open in IMG/M
3300005176\|Ga0066679_10369433	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	939	Open in IMG/M
3300005177\|Ga0066690_10834828	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300005184\|Ga0066671_10131350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1435	Open in IMG/M
3300005187\|Ga0066675_10144515	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1626	Open in IMG/M
3300005294\|Ga0065705_10452363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300005295\|Ga0065707_10322766	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	963	Open in IMG/M
3300005440\|Ga0070705_100525915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300005451\|Ga0066681_10574596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300005518\|Ga0070699_101072648	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300005518\|Ga0070699_101228466	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300005537\|Ga0070730_10001079	All Organisms → cellular organisms → Bacteria	27211	Open in IMG/M
3300005549\|Ga0070704_100240079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1482	Open in IMG/M
3300005554\|Ga0066661_10860317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300005561\|Ga0066699_10153840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1572	Open in IMG/M
3300005561\|Ga0066699_10408566	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300005566\|Ga0066693_10035138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1608	Open in IMG/M
3300005569\|Ga0066705_10347688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	935	Open in IMG/M
3300005575\|Ga0066702_10900387	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300005576\|Ga0066708_10533858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	756	Open in IMG/M
3300005895\|Ga0075277_1002082	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005937\|Ga0081455_10544251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300006031\|Ga0066651_10037082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2219	Open in IMG/M
3300006845\|Ga0075421_100341693	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300006845\|Ga0075421_100439439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1560	Open in IMG/M
3300006853\|Ga0075420_100931921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300006871\|Ga0075434_102376068	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	532	Open in IMG/M
3300006918\|Ga0079216_11115102	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	624	Open in IMG/M
3300007004\|Ga0079218_10054458	All Organisms → cellular organisms → Bacteria	2507	Open in IMG/M
3300007004\|Ga0079218_12663052	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300009147\|Ga0114129_12334284	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	642	Open in IMG/M
3300009162\|Ga0075423_11724932	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300009799\|Ga0105075_1008960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	890	Open in IMG/M
3300010322\|Ga0134084_10074008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300010322\|Ga0134084_10306841	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	591	Open in IMG/M
3300010364\|Ga0134066_10000797	All Organisms → cellular organisms → Bacteria	4776	Open in IMG/M
3300010399\|Ga0134127_10727318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1035	Open in IMG/M
3300011414\|Ga0137442_1048764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300011438\|Ga0137451_1017744	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300012035\|Ga0137445_1055877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300012204\|Ga0137374_10059476	All Organisms → cellular organisms → Bacteria	3852	Open in IMG/M
3300012353\|Ga0137367_10062133	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300012358\|Ga0137368_10060775	All Organisms → cellular organisms → Bacteria → Acidobacteria	3129	Open in IMG/M
3300012360\|Ga0137375_10209367	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300012469\|Ga0150984_109360815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300012685\|Ga0137397_10865079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	670	Open in IMG/M
3300012918\|Ga0137396_10207240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1442	Open in IMG/M
3300012922\|Ga0137394_10003529	All Organisms → cellular organisms → Bacteria	11789	Open in IMG/M
3300012925\|Ga0137419_10001437	All Organisms → cellular organisms → Bacteria	10212	Open in IMG/M
3300012944\|Ga0137410_10028134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3910	Open in IMG/M
3300012944\|Ga0137410_10092162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2233	Open in IMG/M
3300014166\|Ga0134079_10000286	All Organisms → cellular organisms → Bacteria	13155	Open in IMG/M
3300014166\|Ga0134079_10184803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	864	Open in IMG/M
3300017997\|Ga0184610_1081471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1004	Open in IMG/M
3300017997\|Ga0184610_1103561	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	904	Open in IMG/M
3300018028\|Ga0184608_10021601	All Organisms → cellular organisms → Bacteria	2342	Open in IMG/M
3300018031\|Ga0184634_10126065	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300018031\|Ga0184634_10213044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300018053\|Ga0184626_10368287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300018054\|Ga0184621_10065451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1241	Open in IMG/M
3300018056\|Ga0184623_10004819	All Organisms → cellular organisms → Bacteria	5748	Open in IMG/M
3300018056\|Ga0184623_10387163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300018071\|Ga0184618_10022715	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300018072\|Ga0184635_10230804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300018074\|Ga0184640_10080721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1391	Open in IMG/M
3300018074\|Ga0184640_10473408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300018084\|Ga0184629_10072891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1626	Open in IMG/M
3300018084\|Ga0184629_10126929	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300018433\|Ga0066667_11971809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300018482\|Ga0066669_10134005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1791	Open in IMG/M
3300018482\|Ga0066669_10766441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	852	Open in IMG/M
3300019244\|Ga0180111_1174228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	649	Open in IMG/M
3300019869\|Ga0193705_1026666	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1249	Open in IMG/M
3300019879\|Ga0193723_1000084	All Organisms → cellular organisms → Bacteria	30138	Open in IMG/M
3300019997\|Ga0193711_1032198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	655	Open in IMG/M
3300020003\|Ga0193739_1000448	All Organisms → cellular organisms → Bacteria	11549	Open in IMG/M
3300020010\|Ga0193749_1035919	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300021073\|Ga0210378_10011317	All Organisms → cellular organisms → Bacteria	3762	Open in IMG/M
3300021073\|Ga0210378_10202862	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300021080\|Ga0210382_10425542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300021081\|Ga0210379_10034764	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300021081\|Ga0210379_10494350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300021344\|Ga0193719_10115125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1169	Open in IMG/M
3300021951\|Ga0222624_1238630	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300021972\|Ga0193737_1001588	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300022534\|Ga0224452_1008668	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
3300025917\|Ga0207660_10445713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300026295\|Ga0209234_1003541	All Organisms → cellular organisms → Bacteria	5946	Open in IMG/M
3300026300\|Ga0209027_1001318	All Organisms → cellular organisms → Bacteria	9327	Open in IMG/M
3300026300\|Ga0209027_1223374	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300026305\|Ga0209688_1056802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300026306\|Ga0209468_1074520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1136	Open in IMG/M
3300026310\|Ga0209239_1053746	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300026318\|Ga0209471_1012825	All Organisms → cellular organisms → Bacteria	4344	Open in IMG/M
3300026323\|Ga0209472_1117266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1047	Open in IMG/M
3300026530\|Ga0209807_1001474	All Organisms → cellular organisms → Bacteria	11165	Open in IMG/M
3300026550\|Ga0209474_10291224	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	972	Open in IMG/M
3300026552\|Ga0209577_10575042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	697	Open in IMG/M
3300027587\|Ga0209220_1000230	All Organisms → cellular organisms → Bacteria	23351	Open in IMG/M
3300027857\|Ga0209166_10003950	All Organisms → cellular organisms → Bacteria	10536	Open in IMG/M
3300027909\|Ga0209382_10665130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1125	Open in IMG/M
3300027909\|Ga0209382_11782852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300027961\|Ga0209853_1116304	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300028784\|Ga0307282_10009896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3807	Open in IMG/M
3300028784\|Ga0307282_10037403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2126	Open in IMG/M
3300028793\|Ga0307299_10004880	All Organisms → cellular organisms → Bacteria	4641	Open in IMG/M
3300028807\|Ga0307305_10394024	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300028828\|Ga0307312_10003851	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8033	Open in IMG/M
3300031114\|Ga0308187_10328937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	582	Open in IMG/M
3300031965\|Ga0326597_10287716	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1875	Open in IMG/M
3300033815\|Ga0364946_114194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.08%
Host-Associated	Host-Associated	9.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.94%
Aquatic	Environmental → Aquatic	23.14%
Plants	Host-Associated → Plants	8.26%
Human	Host-Associated → Human	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.12%
Sediment	Environmental → Aquatic → Sediment	15.70%
Freshwater	Environmental → Aquatic → Freshwater	7.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.44%
Digestive System	Host-Associated → Human → Digestive System	1.65%
Floodplain	Environmental → Terrestrial → Floodplain	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.70%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.65%
Sand	Environmental → Terrestrial → Soil → Sand	1.65%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.65%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.53%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.65%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001086	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009799	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012035	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019244	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT293_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12709J13192_10016382	3300001086	Forest Soil	MKRLIPLLALAVLAACASANRYARWPYRGPMLMVTNPTHSRLTVMARDGMGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQFKPVSNPNVCR*
soilL2_101267664	3300003319	Sugarcane Root And Bulk Soil	MNKVLAVLALAALAGCANLTQYAKWPYRGPMMMVRNSTTTKLVVTARDGMGRELVTARLDPNDKQCFRWPLIHDIGYLIARAPSDTVQTDAFKPWSADGWEWNGEIEPVSNPKVCR*
Ga0062378_100692801	3300004780	Wetland Sediment	MKGLILPVLAIAALAACASANKYARWPYRGPMLMVTNPTQNRLVVMARDGAGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR*
Ga0058863_112843021	3300004799	Host-Associated	MKSLMIPVLAIAALAACASANKYARWPYRGPMLMVTNPTQSRLVVSARDGQGRELVTATIKPNGKQCFRCPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR*
Ga0058862_111930611	3300004803	Host-Associated	MKSLMIPVLAIAALAACASANKYARWPYRGPMLMVTNPTQSRLVVSARDGQGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR*
Ga0062381_101164152	3300004808	Wetland Sediment	MKGLILPVLAIAALAACASANKYARWPYRGPMLMVTNPTQNRLVVMARDGAGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADG
Ga0066677_100762931	3300005171	Soil	MRAAILSMLAIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPR
Ga0066677_104502962	3300005171	Soil	MKRLIIPVLTIALAAACASANKYARWPYRGPMLLVTNPTNSPLVVSARDGMGRELVTATIKPKGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPRVCR*
Ga0066677_104956831	3300005171	Soil	TRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRPNPKVCR*
Ga0066673_103321771	3300005175	Soil	MLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQ
Ga0066673_104173472	3300005175	Soil	MRVAVLSVLTIAVAAACARGNTTRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0066679_103694332	3300005176	Soil	MQSRIVAAPAAPAALAIAVLIGCASATRYTQWPYQGPMMMVRNPTHNTLVVLARDGTGRELVAARVEPNSKQCFRWPFIHAIGYLVAAESPHDTLTTEPFQPWSADGWEWSGQLEPKSNPNACR*
Ga0066690_108348282	3300005177	Soil	MRAAILSVLAIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLE
Ga0066671_101313501	3300005184	Soil	MRAAILSVLAIAAAAACARGSTTRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELVTARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRPNPKVCR*
Ga0066675_101445151	3300005187	Soil	MRSAILSVLTIAAAAACARGSATRYTQWPYEGPMMMVTNPTPNTVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0065705_104523631	3300005294	Switchgrass Rhizosphere	MKLLVSLLAVTLTGCMTTRYAHWPLRGPMLMVQNPTQSRLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHSVGYLIASGSDTLTTQAFEPWSADGWEWSGKFE
Ga0065707_103227661	3300005295	Switchgrass Rhizosphere	MKLLVSLLAVTLTGCMTTRYAHWPLRGPMLMVQNPTQSRLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHSVGYLIASGSDTLTTQAFEPWSADGWEWS
Ga0070705_1005259152	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKVLVSLLAVTLSACMMTTKYARWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0066681_105745962	3300005451	Soil	MRVAVLSVLTIAAAAACARGNTTRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0070699_1010726481	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKGFLCLLAVTLTACMTTRYAHWPLRGPMLMVQNHTQTQLVVSARDGAGRELVTARIKPNGKSCFRWPFVHSVGYLIASGSDTLTTHAFEPWSADGWEWSAEFEPVANPKVCR*
Ga0070699_1012284662	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKVFVPLLVLALCACASINNYARWPYRGPMLMVQNPTQNRLIVRARDGVGREWVTANIKPHGKACFRWPFVHTIGYLVAVGSDTLTTEPFEPWSADGWEWSGQFEPVANPKVCR*
Ga0070730_1000107926	3300005537	Surface Soil	MQTRILAPLALAVMAACAGATRYTQWPYEAPMMLVRNPTANTLVVLARDGAGRELVAARIEPNRTQCFRWPFLHAIGYLAATEATTDTLTTQPFRPWSADGWEWSGEVEPRSNPNACR*
Ga0070704_1002400792	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKVLVSLLAVTLSACMMTTKYARWPYRGPMLMVQNPTQTPLVVSARDGAGRELVTATIKANGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTA
Ga0066661_108603171	3300005554	Soil	MRAAILSVLTIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLKPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSDPKVCR*
Ga0066699_101538402	3300005561	Soil	MRAAILSMLAIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0066699_104085662	3300005561	Soil	MRAAILSVIAIAAAVACARGSTTRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELVTARLQPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0066693_100351382	3300005566	Soil	MLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSHTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG*
Ga0066705_103476883	3300005569	Soil	MRAAILSVLTIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLKPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0066702_109003872	3300005575	Soil	MRAAILSVLAIAAAAACARGNTTRYAQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRSNPKVCR*
Ga0066708_105338582	3300005576	Soil	MRAAIFSMLAIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRPNPKVCR*
Ga0075277_10020821	3300005895	Rice Paddy Soil	MFPRITVALAFLIVVGCAGARQYSQWPYRGPMMLVRNPTAHTLVVLARDGTGRELITARVRPNSRQCFRWPFIDATGYLRAAESASDTLTTEQFQPWSADGWEWSPATRLRPRLGD
Ga0081455_105442512	3300005937	Tabebuia Heterophylla Rhizosphere	MRVLVSLLALSATACMMTTRYAHWPYRGPMLMVQNPTHSRLVVSARDGAGRELITATIKPNGKSCFRWPFVHTVGYLVASGSDTLTTQAFEP
Ga0066651_100370822	3300006031	Soil	MLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG*
Ga0075421_1003416932	3300006845	Populus Rhizosphere	MRVLVSLLALSLTACMMTTKYAHWPYRGPMLMVQNPTQNRLVVSARDGAGRELVTATIKPNGTSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0075421_1004394392	3300006845	Populus Rhizosphere	MKVFVPLLLLALTACAASLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR*
Ga0075420_1009319212	3300006853	Populus Rhizosphere	MKTFVPLLVLALAACASLNRYARWPYRGPMFMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR*
Ga0075434_1023760682	3300006871	Populus Rhizosphere	VLVSLLALSLTACMMTTRYARWPYRGPMFMVQNPTQRPLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSAKFEPIANPKVCR*
Ga0079216_111151022	3300006918	Agricultural Soil	MNKVLAVFALVSLAGCANLTQYARWPYRGPMMMVRNSTSASVVVTARDGVGRELVTARIGPNGKQCFRWPFIHETGYLTARAQGDTLTTEPFKPWSADGWEWSGELEPVSNPRVCR*
Ga0079218_100544583	3300007004	Agricultural Soil	MNKVLAVFALVSLAGCANLTQYARWPYRGPMMMVRNSTSASVVVTARDGVGRELVTARIGPNGKQCFRWPFIHETGYLIARAKADTLTTEPFKPWSADGWEWSGELEPISNPRVCR*
Ga0079218_126630521	3300007004	Agricultural Soil	MKSLMIPVLAIAALAACASANKYARWPYRGPMLMVTNPMQNRLVVSARDGQGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR*
Ga0114129_123342841	3300009147	Populus Rhizosphere	MMTTKYAHWPYRGPMLMVQNPTQRPLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0075423_117249322	3300009162	Populus Rhizosphere	MLMVQNPTQRPLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0105075_10089602	3300009799	Groundwater Sand	MKRLLLPLLTIAAVTACASANNYARWPYRGPMLLVTNPTNTPLVVSARDGMGRELVTATIRPNSQQCFRWPFIHAIGYLIAMGSDTLTTQPFEPWTSHAWEWSGQIEPVSNPKVCR*
Ga0134084_100740081	3300010322	Grasslands Soil	MLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGW
Ga0134084_103068412	3300010322	Grasslands Soil	MQSRIVAALAALAVAVLIGCASATRYTQWPYQGPMMMVRNSTPNMLVVLARDGTGRELVAARVKPNSKQCFRWPFIHAIGYLVAAESPHDTLTTEPFQPWSADGWEWSGQLAPKSNPKVCR*
Ga0134066_100007972	3300010364	Grasslands Soil	MVSRTIIALAFLLGAGCASASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG*
Ga0134127_107273181	3300010399	Terrestrial Soil	PYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0137442_10487642	3300011414	Soil	MTGHYARWPYRGPMLMVQNPTQSRLVVLARDGVGRELVTATIKPHSKSCFRWPFVHAIGYLIAAGSDTLTSEPFEPWSADGWEWSGQFEPVANPRVCR*
Ga0137451_10177442	3300011438	Soil	MKVFVPVLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR*
Ga0137445_10558772	3300012035	Soil	MKVVVPLLVLALCACASLNNYARWPYRGPMLMVQNPTQKRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR*
Ga0137374_100594762	3300012204	Vadose Zone Soil	MMSTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTASIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0137367_100621333	3300012353	Vadose Zone Soil	MMTTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTASIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0137368_100607752	3300012358	Vadose Zone Soil	MRVLVSLLALSLTACMMSTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTASIKPNGTSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0137375_102093672	3300012360	Vadose Zone Soil	MRVLVSLLALSLTACMMSTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTASIKPNGTSCFRWPFVHTVGYLIASGSDTLTTRAFEPWTADGWEWSGKFEPVANPKVCR*
Ga0150984_1093608152	3300012469	Avena Fatua Rhizosphere	MKRLLLPVLTIAAVAACASANKYARWPYRGPILLVTNPTNSQLVVSARDRMGRELVTATIKPKGKQCFRWPFIHAIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPKVCR*
Ga0137397_108650792	3300012685	Vadose Zone Soil	MTAKYAHWPYRGPMLMVQNPTQSRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVPNPKVCR*
Ga0137396_102072402	3300012918	Vadose Zone Soil	MTAKYAHWPYRGPMLMVQNPTQSRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGKF
Ga0137394_100035298	3300012922	Vadose Zone Soil	MLMVQNPTQSRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHNVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVPNPKVCR*
Ga0137419_100014378	3300012925	Vadose Zone Soil	MTAKYAHWPYRGPMLMVQNPTQSRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR*
Ga0137410_100281342	3300012944	Vadose Zone Soil	MRVLVSLLALSLTACMMTTRYAHWPYRGPMLLVQNPTQGRLVVRARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGRFEPVANPKVCR*
Ga0137410_100921622	3300012944	Vadose Zone Soil	MTAKYAHWPYRGPMLMVQNPTQSRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWS
Ga0134079_100002869	3300014166	Grasslands Soil	MVSRTIIALAFLLGAGCASASQYTQWPYQGPMMMVKNPTSHTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG*
Ga0134079_101848032	3300014166	Grasslands Soil	MFPRIIIALAFLLAVGCASASPRYTQWPYRGPLMMVRNPTRETVVVLARDGTGRELITARLQPNGKQCFRWPFIHAIGYLRAAESARDTLTSEPFQPWSADGWEWAPMTRLKPRLGACG*
Ga0184610_10814711	3300017997	Groundwater Sediment	MKVLVPLLLLALTACAATLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGRELVTARIGPHGKACFRWPFIHTIGYLVAAGSDTLATEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0184610_11035611	3300017997	Groundwater Sediment	MKRLILPVLSLAVVAACASTTRYARWPYRGPMLMVTNPTQSRLVVMARDGMGRELVAATIKPNGKQCFRWPFIHAIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPKVCR
Ga0184608_100216012	3300018028	Groundwater Sediment	MKLLVSLLAVTLSACMMTTKYAHWPLRGPMLMVQNPTQARLVVSARDGAGRQLVTATIRPNGKSCFRWPFVHSVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR
Ga0184634_101260652	3300018031	Groundwater Sediment	MKVFVSLLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR
Ga0184634_102130441	3300018031	Groundwater Sediment	MKRVIPVLTLAVLAACASANQYARWPLRGPMLMVTNPTQKRLVVLARDGMGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQVEPVSNPNVCR
Ga0184626_103682871	3300018053	Groundwater Sediment	PLLLLALTACAATLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0184621_100654512	3300018054	Groundwater Sediment	PLRGPMLMVQNPTQARLVVSARDGAGRQLVTATIRPNGKSCFRWPFVHSVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR
Ga0184623_100048193	3300018056	Groundwater Sediment	MKGLIIPVLTLAVVAACASANQYARWPYRGPMLMVTNPTQSRLVVMARDGMGRELVAATIKPNGKQCFRWPFIHAIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPKVCR
Ga0184623_103871631	3300018056	Groundwater Sediment	MKVFVPLFVLALCACASLNNYARWPYRGPMLMVQNPTQKRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR
Ga0184618_100227152	3300018071	Groundwater Sediment	MRVLVSLLALSLTACMMTTKYARWPYRGPMLMVQNPTQNRLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR
Ga0184635_102308041	3300018072	Groundwater Sediment	LTACMTTRYAHWPLRGPMLMVQNPTQSRLVISARDGAGRQLVTATIKPNGKSCFRWPFVHSVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR
Ga0184640_100807212	3300018074	Groundwater Sediment	MKGLILPVLTLAVVAACASANQYARWPYRGPMLMVTNPTQSRLVVMARDGMGRELVAATIKPNGKQCFRWPFIHAIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPKVCR
Ga0184640_104734081	3300018074	Groundwater Sediment	MKRVIPVLTLAVLAACASANQYARWPVRGPMLMVTNPTQKRLVVLARDGMGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQVEPVSNPNVCR
Ga0184629_100728911	3300018084	Groundwater Sediment	MLMVQNPTQNRLVVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0184629_101269292	3300018084	Groundwater Sediment	MKVFVPVLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0066667_119718092	3300018433	Grasslands Soil	MRAAIFSMLAIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPHSDQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRSNPKVCR
Ga0066669_101340052	3300018482	Grasslands Soil	MKRLIIPVLTIALAAACASANKYARWPYRGPMLLVTNPTNSPLVVSARDGMGRELVTATIKPKGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPRVCR
Ga0066669_107664413	3300018482	Grasslands Soil	MVSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG
Ga0180111_11742282	3300019244	Groundwater Sediment	MKVFVPLLVLALCACASLNNYAHWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR
Ga0193705_10266661	3300019869	Soil	MKVLVSLLAVTLSACMMTTKYARWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLKTQAFEPWTADGWEWSGKFEPVANPKVCR
Ga0193723_100008427	3300019879	Soil	MKLLVSLLAVTLSACMMTTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLKTQAFEPWTADGWEWSGKFEPVANPRVCR
Ga0193711_10321981	3300019997	Soil	LLALVLSACATVQYARWPYRGPMLMVQNPTAARLIVRARDGAGREWVTASIKPHGTSCFRWPFIHTVGYLIAAGSDTLKTQAFEPWTADGWEWSGQFEPVKNPGVCR
Ga0193739_100044810	3300020003	Soil	MKVFVPLVVLALCACASLNNYARWPYRGPMLMVQNPTQQRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR
Ga0193749_10359191	3300020010	Soil	VTLSACMMTTKYARWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLKTQAFEPWTADGWEWSGKFEPVANPKVCR
Ga0210378_100113172	3300021073	Groundwater Sediment	MKVFVPLLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0210378_102028622	3300021073	Groundwater Sediment	MKAFLPLLALVLSACATVQYARWPYRGPMLMVQNPTATRLIVRARDGAGREWVTASIKPHGTSCFRWPFIHTVGYLIAAGSDTLKTQAFEPWTADGWEWSGQFEPVKNPGVCR
Ga0210382_104255421	3300021080	Groundwater Sediment	FRYTSSGGVFMRVLVSLLALSLTACMMTTKYARWPYRGPMLMVQNPTQNRLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLTTQAFEPWSADGWEWSGKFEPVANPKVCR
Ga0210379_100347642	3300021081	Groundwater Sediment	MKVFVPVLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLVVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0210379_104943501	3300021081	Groundwater Sediment	MKVFVPVLVLALCACASLNNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRV
Ga0193719_101151252	3300021344	Soil	MQSRILAALAVAALLGCAGATRYTQWPYRGPMMMVQNPTQNTLVVLARDGTGRELITARVRPNSTQCFRWPFIHAIGYLVAAESPHDTLTTQPFQPWSADGWEWSGQLEPKSNPNACR
Ga0222624_12386301	3300021951	Groundwater Sediment	ASPIPAHVEARELVPANPSIGGSTMKLLVSLLAVTLSACMMTTKYARWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLKTQAFEPWTADGWEWSGKFEPVANPKVCR
Ga0193737_10015882	3300021972	Soil	MKVFVPLLLLALTACAATLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKVCFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0224452_10086683	3300022534	Groundwater Sediment	MKVLVPLLLLALTACAAPLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGRELVTARIGPHGKACFRWPFIHTIGYLVAAGSDTLATEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0207660_104457131	3300025917	Corn Rhizosphere	MKSLMIPVLAIAALAACASANKYARWPYRGPMLMVTNPTQSRLVVSARDGQGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLMTEPFEPWSADGWEWSGQFEPVSNPKVCR
Ga0209234_10035417	3300026295	Grasslands Soil	MRAPILSVLAIAAAAACARGNTTRYAQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRPNPKVCR
Ga0209027_10013186	3300026300	Grasslands Soil	MRAAILSVLAIAAAAACARGNTTRYAQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRPNPKVCR
Ga0209027_12233741	3300026300	Grasslands Soil	RIIIALAFLIAVGCASASPRYTQWPYRGPMMMVRNPTRETVVVLARDGSGRELITARLQPNSKQCFRWPFIHAIGYLRAAESARDTLTSEPFQPWSADGWEWSPMTRLKPRLGACG
Ga0209688_10568022	3300026305	Soil	AMLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSHTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG
Ga0209468_10745203	3300026306	Soil	MLSRTIIALAFLLGAGCAGASQYTQWPYQGPMMMVKNPTSQTLVVLARDGTGRQLITARVRPKSMQCFRWPFIDVTGYLRAAETAADTVTTGPFQPWSAAGWEWSAREQPKSNPNACG
Ga0209239_10537463	3300026310	Grasslands Soil	AIAAAAACARGNTTRYAQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLRPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPRPNPKVCR
Ga0209471_10128255	3300026318	Soil	MQSRIVAAPAALAIAVLIGCASATRYTQWPYQGPMMMVRNPTHNTLVVLARDGTGRELVAARVEPNSKQCFRWPFIHAIGYLVAAESPHDTLTTEPFQPWSADGWEWSGQLEPKSNPNAC
Ga0209472_11172661	3300026323	Soil	RLIIPVLTIALAAACASANKYARWPYRGPMLLVTNPTNSPLVVSARDGMGRELVTATIKPKGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPRVCR
Ga0209807_10014742	3300026530	Soil	MRAAILSVLTIAAAAACARGSATRYTQWPYEGPMMMVRNPTPNPVVVLARDGMGRELITARLKPNSNQCFRWPFIHAIGYLVAAGRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR
Ga0209474_102912241	3300026550	Soil	MRSAILSVLTIAAAAACARGSATRYTQWPYEGPMMMVTNPTPNTVVVLARDGMGRELITARLQPNSNQCFRWPFIHAIGYLGAARRDTLTTEPFQPWSADGWEWSGQLEPRSNPKVCR
Ga0209577_105750422	3300026552	Soil	MRAAILSVLAIAAAAACARGNTTRYAQWPYEGPMMMVRNPTPNPVVVLARDGMGRELVTARLQPNSNQCFRWPFIHAIGYLVAAGRDTLSTEPFQPWSADGWEWSGQLEPR
Ga0209220_100023020	3300027587	Forest Soil	MKRLIPLLALAVLAACASANRYARWPYRGPMLMVTNPTHSRLTVMARDGMGRELVTATIKPNGKQCFRWPFIHAIGYLIAAGSDTLTTEPFEPWSADGWEWSGQFKPVSNPNVCR
Ga0209166_100039508	3300027857	Surface Soil	MQTRILAPLALAVMAACAGATRYTQWPYEAPMMLVRNPTANTLVVLARDGAGRELVAARIEPNRTQCFRWPFLHAIGYLAATEATTDTLTTQPFRPWSADGWEWSGEVEPRSNPNACR
Ga0209382_106651301	3300027909	Populus Rhizosphere	MKVFVPLLLLALTACAASLRYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0209382_117828521	3300027909	Populus Rhizosphere	MRVLVSLLALSLTACMMTTKYAHWPYRGPMLMVQNPTQNRLVVSARDGAGRELVTATIKPNGTSCFRWPFVHTVGYLIASGSDTLTTQAFEPWTADGWEWSGKFEPVANPKVCR
Ga0209853_11163042	3300027961	Groundwater Sand	MKGWILPVLTLAVVAACASANQYARWPYRGPMLMVTNPTQSRLVVMARDGMGRELVTATIKPNGKQCFRWPFIHAIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVSNPKVCR
Ga0307282_100098961	3300028784	Soil	MKVLVSLLAVTLSACMMTTKYAHWPYRGPMLMVQNPTQTRLVVSARDGAGRELVTATIKPNGKSCFRWPFVHTVGYLIASGSDTLKTQAFEPWTADGWEWSGKFEPVANPRVCR
Ga0307282_100374032	3300028784	Soil	MQPRILAALGVAALLGCASATRYTQWPYRGPMMMVQNPTQNTLVVLARDGTGRELITARVRPNSTQCFRWPFIHAIGYLVAAESPHDTLTTQPFQPWSADGWEWSGQLEPKSNPRVCR
Ga0307299_100048802	3300028793	Soil	MRVLVSLLALSLTACMMTTKYARWPYRGPMLMVQNPTQNRLVVSARDGAGRQLVTATIKPNGKSCFRWPFVHNVGYLIASGSDTLTTRAFEPWSADGWEWSGKFEPVANPKVCR
Ga0307305_103940242	3300028807	Soil	QPRILAALGVAALLGCASATRYTQWPYRGPMMMVQNPTQNTLVVLARDGTGRELITARVRPNSTQCFRWPFIHAIGYLVAAESPHDTLTTQPFQPWSADGWEWSGQLEPKSNPRVCR
Ga0307312_100038519	3300028828	Soil	MQSRILAALGVAALLGCASATRYTQWPYRGPMMMVQNPTQNTLVVLARDGTGRELITARVRPNSTQCFRWPFIHAIGYLVAAESPHDTLTTQPFQPWSADGWEWSGQLEPKSNPRVCR
Ga0308187_103289371	3300031114	Soil	MNTFVPLLVVALGACASLHNYARWPYRGPMLMVQNPTQNRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGQFEPVANPRVCR
Ga0326597_102877164	3300031965	Soil	MKVLVPLLAAALTACITSNYNYARWPYRGPMLMVTNPTQGQLVVRARDGMGRELITATVKPNGRQCFRWPFIHEIGYLIAAGSDTLTTRSFEPWTADGWEWSGQFEPVANPKICR
Ga0364946_114194_72_329	3300033815	Sediment	MLMVQNPTQKRLIVSARDGVGREWVTATIKPHGKACFRWPFIHTIGYLVAAGSDTLTTEPFEPWSADGWEWSGEFEPVANPRVCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences