Metagenome Family F072050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072050
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	41 residues
Representative Sequence	GLYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Number of Associated Samples	79
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	84.30 %
% of genes from short scaffolds (< 2000 bps)	85.12 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.719 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (64.463 % of family members)
Environment Ontology (ENVO)	Unclassified (91.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (63.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF00211	Guanylate_cyc	3.31
PF16177	ACAS_N	2.48
PF13565	HTH_32	1.65
PF13683	rve_3	1.65
PF13384	HTH_23	0.83
PF06827	zf-FPG_IleRS	0.83
PF04909	Amidohydro_2	0.83
PF00296	Bac_luciferase	0.83
PF03352	Adenine_glyco	0.83
PF13676	TIR_2	0.83
PF07311	Dodecin	0.83
PF07508	Recombinase	0.83
PF11294	DUF3095	0.83
PF01527	HTH_Tnp_1	0.83
PF06283	ThuA	0.83
PF07366	SnoaL	0.83
PF02515	CoA_transf_3	0.83
PF00355	Rieske	0.83
PF00872	Transposase_mut	0.83
PF03237	Terminase_6N	0.83
PF02371	Transposase_20	0.83
PF11149	DUF2924	0.83
PF00118	Cpn60_TCP1	0.83
PF09371	Tex_N	0.83
PF00571	CBS	0.83
PF13276	HTH_21	0.83
PF06736	TMEM175	0.83
PF04392	ABC_sub_bind	0.83
PF04248	NTP_transf_9	0.83
PF13470	PIN_3	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.31
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.83
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.83
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.83
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.83
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.83
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.83
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
All Organisms	root	All Organisms	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
cellular organisms	root	All Organisms → cellular organisms	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.93 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.83 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	14.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.65 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.05 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.83 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.83 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.05 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.83 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.83 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.83 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.05 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
Azorhizobium caulinodans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans	0.83 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.83 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.83 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.05 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.65 %
Azorhizobium caulinodans ORS 571	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans → Azorhizobium caulinodans ORS 571	0.83 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.83 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.83 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.83 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100150617	Not Available	1815	Open in IMG/M
3300006854\|Ga0075425_101222704	Not Available	853	Open in IMG/M
3300006881\|Ga0068865_100523893	Not Available	992	Open in IMG/M
3300010400\|Ga0134122_10313611	Not Available	1351	Open in IMG/M
3300012924\|Ga0137413_11164751	Not Available	613	Open in IMG/M
3300016294\|Ga0182041_11673419	Not Available	588	Open in IMG/M
3300016294\|Ga0182041_12236878	Not Available	511	Open in IMG/M
3300016341\|Ga0182035_10432020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300016341\|Ga0182035_11025508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300016357\|Ga0182032_10352184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300016357\|Ga0182032_10479055	Not Available	1020	Open in IMG/M
3300016387\|Ga0182040_10477671	Not Available	992	Open in IMG/M
3300016404\|Ga0182037_10234996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1442	Open in IMG/M
3300016422\|Ga0182039_10354136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1233	Open in IMG/M
3300016445\|Ga0182038_10541806	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300016445\|Ga0182038_11059996	Not Available	719	Open in IMG/M
3300016445\|Ga0182038_12128892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300021171\|Ga0210405_10725038	Not Available	766	Open in IMG/M
3300021474\|Ga0210390_11622521	Not Available	509	Open in IMG/M
3300027911\|Ga0209698_11170562	Not Available	567	Open in IMG/M
3300031545\|Ga0318541_10217624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1058	Open in IMG/M
3300031545\|Ga0318541_10522125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	664	Open in IMG/M
3300031546\|Ga0318538_10194269	Not Available	1082	Open in IMG/M
3300031561\|Ga0318528_10071659	Not Available	1785	Open in IMG/M
3300031564\|Ga0318573_10006942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4588	Open in IMG/M
3300031564\|Ga0318573_10259468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	927	Open in IMG/M
3300031572\|Ga0318515_10343129	Not Available	801	Open in IMG/M
3300031573\|Ga0310915_10085012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2111	Open in IMG/M
3300031573\|Ga0310915_10180758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1469	Open in IMG/M
3300031640\|Ga0318555_10814372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300031679\|Ga0318561_10143940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1277	Open in IMG/M
3300031679\|Ga0318561_10247097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	972	Open in IMG/M
3300031680\|Ga0318574_10109093	Not Available	1543	Open in IMG/M
3300031680\|Ga0318574_10400971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300031681\|Ga0318572_10171725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1259	Open in IMG/M
3300031681\|Ga0318572_10216435	Not Available	1121	Open in IMG/M
3300031681\|Ga0318572_10536022	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300031708\|Ga0310686_118832130	Not Available	510	Open in IMG/M
3300031713\|Ga0318496_10098504	Not Available	1567	Open in IMG/M
3300031719\|Ga0306917_10001311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11626	Open in IMG/M
3300031719\|Ga0306917_10136516	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300031744\|Ga0306918_10542237	Not Available	911	Open in IMG/M
3300031747\|Ga0318502_10076655	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300031763\|Ga0318537_10357207	Not Available	539	Open in IMG/M
3300031768\|Ga0318509_10773452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031781\|Ga0318547_11017803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	518	Open in IMG/M
3300031782\|Ga0318552_10273785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	857	Open in IMG/M
3300031793\|Ga0318548_10329831	Not Available	749	Open in IMG/M
3300031793\|Ga0318548_10330603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031794\|Ga0318503_10305261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031797\|Ga0318550_10182219	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031805\|Ga0318497_10087807	Not Available	1656	Open in IMG/M
3300031805\|Ga0318497_10119971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1423	Open in IMG/M
3300031819\|Ga0318568_10739074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300031821\|Ga0318567_10587662	Not Available	632	Open in IMG/M
3300031832\|Ga0318499_10089053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1188	Open in IMG/M
3300031835\|Ga0318517_10586589	Not Available	501	Open in IMG/M
3300031879\|Ga0306919_11325884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	544	Open in IMG/M
3300031880\|Ga0318544_10028276	Not Available	1933	Open in IMG/M
3300031890\|Ga0306925_11387878	Not Available	693	Open in IMG/M
3300031893\|Ga0318536_10061416	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300031893\|Ga0318536_10137206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1240	Open in IMG/M
3300031893\|Ga0318536_10486041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300031910\|Ga0306923_10156448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2602	Open in IMG/M
3300031910\|Ga0306923_10308425	Not Available	1808	Open in IMG/M
3300031910\|Ga0306923_10683218	Not Available	1144	Open in IMG/M
3300031910\|Ga0306923_10700507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1127	Open in IMG/M
3300031912\|Ga0306921_10237270	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300031912\|Ga0306921_10484280	All Organisms → cellular organisms → Bacteria → Proteobacteria	1439	Open in IMG/M
3300031912\|Ga0306921_10841264	Not Available	1045	Open in IMG/M
3300031941\|Ga0310912_11412164	Not Available	525	Open in IMG/M
3300031945\|Ga0310913_10111673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1859	Open in IMG/M
3300031945\|Ga0310913_10582931	Not Available	793	Open in IMG/M
3300031946\|Ga0310910_10556256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans → Azorhizobium caulinodans ORS 571	910	Open in IMG/M
3300031946\|Ga0310910_10964375	Not Available	667	Open in IMG/M
3300031947\|Ga0310909_10660621	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031947\|Ga0310909_11648376	Not Available	507	Open in IMG/M
3300031954\|Ga0306926_11027097	Not Available	979	Open in IMG/M
3300031959\|Ga0318530_10178856	Not Available	867	Open in IMG/M
3300031959\|Ga0318530_10242254	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300031981\|Ga0318531_10065959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1558	Open in IMG/M
3300031981\|Ga0318531_10069632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300031981\|Ga0318531_10119533	Not Available	1169	Open in IMG/M
3300032001\|Ga0306922_12194866	Not Available	532	Open in IMG/M
3300032010\|Ga0318569_10422043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	622	Open in IMG/M
3300032035\|Ga0310911_10335171	Not Available	872	Open in IMG/M
3300032039\|Ga0318559_10273069	Not Available	783	Open in IMG/M
3300032039\|Ga0318559_10618222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032041\|Ga0318549_10338944	Not Available	677	Open in IMG/M
3300032042\|Ga0318545_10244658	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300032044\|Ga0318558_10074629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1548	Open in IMG/M
3300032055\|Ga0318575_10332471	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300032059\|Ga0318533_11265069	Not Available	539	Open in IMG/M
3300032063\|Ga0318504_10151432	Not Available	1068	Open in IMG/M
3300032063\|Ga0318504_10237616	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	856	Open in IMG/M
3300032066\|Ga0318514_10227724	Not Available	979	Open in IMG/M
3300032066\|Ga0318514_10746927	Not Available	520	Open in IMG/M
3300032076\|Ga0306924_10096569	Not Available	3335	Open in IMG/M
3300032076\|Ga0306924_11440076	Not Available	733	Open in IMG/M
3300032076\|Ga0306924_11471652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300032076\|Ga0306924_11529171	Not Available	706	Open in IMG/M
3300032089\|Ga0318525_10680521	Not Available	524	Open in IMG/M
3300032090\|Ga0318518_10614540	Not Available	554	Open in IMG/M
3300032094\|Ga0318540_10477036	Not Available	602	Open in IMG/M
3300032261\|Ga0306920_100308692	Not Available	2355	Open in IMG/M
3300032261\|Ga0306920_100958090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1248	Open in IMG/M
3300032261\|Ga0306920_101823940	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300033289\|Ga0310914_11718589	Not Available	531	Open in IMG/M
3300033290\|Ga0318519_10471819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300033290\|Ga0318519_10671328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.35%
Host-Associated	Host-Associated	1.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.69%
Aquatic	Environmental → Aquatic	1.65%
Plants	Host-Associated → Plants	1.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.69%
Freshwater	Environmental → Aquatic → Freshwater	0.83%
Sediment	Environmental → Aquatic → Sediment	0.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	94.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	64.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.93%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.83%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1001506172	3300004152	Bog Forest Soil	MNGEGLLEFYRQHAEAAAQRSKPQHAQTVPQPGSMEWVKAQEQKG*
Ga0075425_1012227042	3300006854	Populus Rhizosphere	EGIYEWYRQQSAAAAQRSKPQPAQTVPQPGSMEWSEAQKKQG*
Ga0068865_1005238932	3300006881	Miscanthus Rhizosphere	MTGEGIYEWYRQQSAAAAQRSKPQPAQTVPQPGSMEWSEAQKKQG*
Ga0134122_103136111	3300010400	Terrestrial Soil	MPGEGIYEWYRQQSAAAAQRSKPQPAQTVPQPGSMEWSEAQKKQG*
Ga0137413_111647511	3300012924	Vadose Zone Soil	MKGEAMFELARRNAEAAEQRRKPQPVETVPQPGSMEWFEAQKKKG*
Ga0182041_116734192	3300016294	Soil	YEWYRQQAKAAAQPSKPQPAQTVPQPGSIEWFKAQKNKG
Ga0182041_122368781	3300016294	Soil	GLYEFYRQQAEAAAQPSKPQPAQTVPQPGSMEWLEARKNKG
Ga0182035_104320203	3300016341	Soil	YRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0182035_110255081	3300016341	Soil	EGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSTEWFQAQKNKG
Ga0182032_103521844	3300016357	Soil	FYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0182032_104790552	3300016357	Soil	LYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQKNKG
Ga0182034_103394941	3300016371	Soil	GEGLYEFYRQQAEAAAQPSKPQPAQTVAQPGSMEWLAQQGKLG
Ga0182040_104776712	3300016387	Soil	EGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKKKG
Ga0182037_102349963	3300016404	Soil	FYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKMKG
Ga0182039_103541361	3300016422	Soil	PMPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0182038_105418061	3300016445	Soil	EFYRQQAKAAAQPSKPQPAQTVPQPGSLEWLEAQKDKG
Ga0182038_110599961	3300016445	Soil	MKGEGIYELYRQMAEAAAQRSKPQPAQTVPQPGSTEWFEARKKQG
Ga0182038_121288921	3300016445	Soil	RQQAKAAAQPSKPQPAQTVPQPGSMEWFKAQKNKG
Ga0210405_107250382	3300021171	Soil	VPEPECEKAAAQRSKPQPAQTVPQPGSMEWFEAQKKKG
Ga0210390_116225211	3300021474	Soil	LYRRRDAEAAAQRSKPQPAQTVPQPGSMEWFEAQKKKG
Ga0209698_111705622	3300027911	Watersheds	MESAGIFELYHQKAEAAAQRNKPQPAQSVPQPGSMEWFEAQKK
Ga0318541_102176243	3300031545	Soil	ELLVEPMPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0318541_105221252	3300031545	Soil	GEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLQAQEKKG
Ga0318538_101942691	3300031546	Soil	LVEPMPGEGIYEFYRQQAKAAAQPSKPQPAQTVPQPGPMEWLEAQEKKG
Ga0318528_100716592	3300031561	Soil	YEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKKKG
Ga0318573_100069421	3300031564	Soil	YELYRGQAEAAAQRSKPQPAQTVPQPGSMEWFKAQKNKG
Ga0318573_102594683	3300031564	Soil	RRQAEADAERSKPQPVQSVPQPGSMEWFEAQKKKA
Ga0318515_103431291	3300031572	Soil	LYEWYRQQAKAAAQPSKLQPTQTVPQPGSMEWLEAQKNKG
Ga0318515_104660031	3300031572	Soil	GFYELLRRQAEADAERSKPQPVQSVPQPGSMEWFEAQKKKA
Ga0310915_100850124	3300031573	Soil	PGEGIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAQKKSR
Ga0310915_101807581	3300031573	Soil	GLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318555_108143721	3300031640	Soil	YRQQAKAAAQPSKPQPAQTVPQPGSMEWLAEQEKSG
Ga0318561_101439401	3300031679	Soil	GLYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318561_102470972	3300031679	Soil	LLVEPMPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGSMEWFKAQKNKG
Ga0318574_101090934	3300031680	Soil	DKRRAEAAAQRNKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318574_104009711	3300031680	Soil	IFELYRQQAKAAAQPSKPQPAQTVPQPGSMEWLAEQEKSG
Ga0318572_101717254	3300031681	Soil	LLVEPMPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0318572_102164351	3300031681	Soil	VEPMPGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKKKG
Ga0318572_105360221	3300031681	Soil	IYELYRQQAKAAAQPSKTQPAQTVPQPGSTEWLEARKKQG
Ga0310686_1188321301	3300031708	Soil	SAGIYALYRQKAAAAAEHSKPQPVKTVPQPGSTEWFEAQKKKG
Ga0318496_100985041	3300031713	Soil	PMPGEGLYEFYRQQAEPAAQPSKPQPPQTVPQPGSMEWFEAEKKKG
Ga0306917_100013111	3300031719	Soil	QLYNQQAEAAAQRSKPQPAQTVPQPGSMEWLAEQEKSR
Ga0306917_101365164	3300031719	Soil	RQMAEAAAQRSKPQPAQTVPQPGSTEWFEARIKQG
Ga0306918_105422372	3300031744	Soil	EPMPGEAIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFQAQKNKG
Ga0318502_100766552	3300031747	Soil	YEWYRQQAKAAQPSKPQPAQTVPQPGSMEWFKAQDKKG
Ga0318502_105929391	3300031747	Soil	FELLRRRAEAAAERSKPPPVQSVPQPGSMEWFEEQKKKA
Ga0318537_103572072	3300031763	Soil	LYEFYREQAKAAAQPSNPQPAQTVPQPGSTEWLEAQEKKG
Ga0318509_107734521	3300031768	Soil	RQQAEAAAQRSKPQPVQSAPQPGSMEWFAWVEAQKKKG
Ga0318543_100426912	3300031777	Soil	RRQAEADAERSKPQPVQSVPQPGSMEWFEAQKKKG
Ga0318547_110178031	3300031781	Soil	LYEWYRHQAKATAQPSNPQPAQTVPQPGSMEWLEAQEKKG
Ga0318552_102737851	3300031782	Soil	LYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAQKKSR
Ga0318548_103298312	3300031793	Soil	IYELYRQQAKAAAQGSKPQPAQTVPQPGSMEWFAEQEKSR
Ga0318548_103306031	3300031793	Soil	PGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGSMEWFKAQKNKG
Ga0318503_103052611	3300031794	Soil	SPGEGISEFDRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318550_100914161	3300031797	Soil	LLRRQAEADAERSKPQPVQSVPQPGSMEWFEAQKKKG
Ga0318550_101822193	3300031797	Soil	MPGEGLLEFYRQRAEAAAQPSKPQPAQTVPQPGSMEWFKAQKNKG
Ga0318497_100878072	3300031805	Soil	PGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKKKG
Ga0318497_101199712	3300031805	Soil	LYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318568_107390742	3300031819	Soil	GIYEWYRQQAKAAQPSKPQPAQTVPQPGSMEWFKAQDKKG
Ga0318567_105876622	3300031821	Soil	GIYEWYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEARNKQG
Ga0318499_100890532	3300031832	Soil	GIYKLYRQQAKAAAQPSKPQPAQTVPQPGSMEWLAEQEKSG
Ga0318517_105865891	3300031835	Soil	GIYELYRQEEEAAEQRRKPQPAQTVPQPGSMEWFEARENQG
Ga0306919_113258842	3300031879	Soil	KGRAPQPASPGEGISEFDRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318544_100282761	3300031880	Soil	QQEEAAAQRSKPQPAQTLPQPGSTEWFAWLEAQEKNG
Ga0318544_102555712	3300031880	Soil	FGSMRGEGIYEWYRQQAKAAAQPSKPQPAQTVAQPGSMEWLAQQGKLG
Ga0306925_113878781	3300031890	Soil	LSRCRAKVYELYCQQAKAAAQPSKPQPAQTVPQPGSVEWSEAQKKKG
Ga0318536_100614161	3300031893	Soil	IYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFQAQKNKG
Ga0318536_101372062	3300031893	Soil	PMPGEGIYELYRQQAEAAAQRSRPQHVQTVPQPGSMEWFEAQKKSR
Ga0318536_104860411	3300031893	Soil	EWYRQQAKAAQPSKPQPAQTVPQPGSMEWFKAQDKKG
Ga0306923_101564484	3300031910	Soil	LLVEPMPGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0306923_103084251	3300031910	Soil	VEPMPGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLQAQEKKG
Ga0306923_106832183	3300031910	Soil	LLVEPMPGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAEKKKG
Ga0306923_107005072	3300031910	Soil	MKGEDIFELYHRDGEAGAQRSKPQPAQTVPQPGSMEWFEAQEKKG
Ga0306921_102372705	3300031912	Soil	GIYEFYRQQAEAAAQRSKPQPAQTVPQPGSMEWFEAQKKQG
Ga0306921_104842801	3300031912	Soil	LYEFYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0306921_108412641	3300031912	Soil	EGIYELYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEAQKKSR
Ga0310912_114121641	3300031941	Soil	EGIYEWYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEARNKQG
Ga0310913_101116731	3300031945	Soil	IYELYHQQAEAAAQRSKPQPAQTVPQPGSTEWLEARKKQG
Ga0310913_105829311	3300031945	Soil	IYELYRQQAEAAAQRSKPQPAQTVPQPGSMEWSEAQKKQG
Ga0310910_105562561	3300031946	Soil	PMKGEGIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWLAEQEKSG
Ga0310910_109643751	3300031946	Soil	FVLYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0310909_106606213	3300031947	Soil	MPGEGLFEFYRHQAKAAAQPSKPQPAQTVPQPGSTEWFQAQKNKG
Ga0310909_116483762	3300031947	Soil	PMPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGSMEWFKAQKNKG
Ga0306926_110270971	3300031954	Soil	ELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAQKKSR
Ga0318530_101788561	3300031959	Soil	GIYELYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEAQKKSR
Ga0318530_102422541	3300031959	Soil	LYEFYRQQAKAAAQPSKPQPAQTVPQPGSVEWSEAQKKKG
Ga0318531_100659593	3300031981	Soil	WYREQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318531_100696324	3300031981	Soil	PQPASPGEGISEFDRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318531_101195332	3300031981	Soil	IYELYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEAQKKSR
Ga0306922_121948662	3300032001	Soil	LVEPMKGEGIYEWYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEARNKQG
Ga0318569_104220431	3300032010	Soil	LYEWYRQQAKPAAQPSKPQPPQTVPQPGSMEWFKAQAEKG
Ga0310911_103351712	3300032035	Soil	GEAIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFQAQKNKG
Ga0318559_102730691	3300032039	Soil	AIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFQAQKNKG
Ga0318559_106182221	3300032039	Soil	GIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFKAQKNKG
Ga0318549_103389441	3300032041	Soil	YHQQAEAAAQRSKPQPAQTVPQPGSTEWFEARKKQG
Ga0318545_102446581	3300032042	Soil	LYRQMAEAAAPRSKPQPAQTVPQPGSTEWFEARKKQG
Ga0318556_102733881	3300032043	Soil	YELLRRQAEADAERSKPQPVQSVPQPGSMEWFEAQKKKA
Ga0318558_100746294	3300032044	Soil	PMPGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0318506_102797732	3300032052	Soil	SWGSYELCRQQAEAAAQRSKPQPVQSVPQPGSMEWFAWVEAQKKKG
Ga0318575_103324713	3300032055	Soil	MPGEGLYEFYRQQAKAAAQPSNPQPAQTVPQPGLMEWLEAQEKKG
Ga0318533_112650692	3300032059	Soil	EPMKGEGIYEWYRQQAEAAAQRSRPQPVQTVPQPGSMEWFEARNKQG
Ga0318504_101514321	3300032063	Soil	GLYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWFKAQKNKG
Ga0318504_102376162	3300032063	Soil	IYELYCQEEEAAEQRRKPQPAQTVPQPGSMEWFEAQENQG
Ga0318513_103860522	3300032065	Soil	GEGIYELYRQQAKAAAQGSKPQPAQTVPQPGSMEWFAEQEKSR
Ga0318514_102277242	3300032066	Soil	LYEFYRQQAKAAAQPSKPQPAQTVPQPGSMEWLQAQEKKG
Ga0318514_107469271	3300032066	Soil	GIYELYRQQAKAAAQPSKTQPAQTVPQPGSMEWFEAQENQG
Ga0306924_100965697	3300032076	Soil	ASPGEGISEFDRQQAKAAAQPSKPQPAQTVPQPGSMEWLEAQEKKG
Ga0306924_114400761	3300032076	Soil	IFELSRQQAEAAAQRGKPQPAQTVPQPGSMEWLAEQEKSG
Ga0306924_114716521	3300032076	Soil	EGIYELYRQQAKAAAQPSKPQPAQTVPQPGSMEWLAEQEKSG
Ga0306924_115291712	3300032076	Soil	GLFEFYRHQAKAAAQPSKPQPAQTVPQPGSTEWFQAQKNKG
Ga0318525_106805211	3300032089	Soil	IYELYRQQAEAAAQRSKPQPAQTVPQPGSTEWFEARKKQG
Ga0318518_106145401	3300032090	Soil	GISEFDRQQAKAAAQPSKPEPAQTVPQPGSIEWLAAQEKKG
Ga0318540_104770361	3300032094	Soil	YRQQAEPAAQPSKPQPPQTVPQPGSMEWFEAEKKKG
Ga0307470_113171601	3300032174	Hardwood Forest Soil	LDVQCNELYRQQAEAAAERSKPQPVQSLPQPGSMEWFEAQK
Ga0306920_1003086922	3300032261	Soil	PGEGLYEFYRQQAKAAAQPSKPQPAQTVPQPGWMEWLEAQEKKG
Ga0306920_1009580902	3300032261	Soil	MPGEGLYEWYRHQAKATAQPSNPQPAQTVPQPGSMEWLEAQEKKG
Ga0306920_1018239401	3300032261	Soil	YRQQAKAAAQPSKPQPAQTVPQPGSMEWFEAQKNKG
Ga0306920_1021314621	3300032261	Soil	NVYELYRQQAEAAAERSKPQPVQSLPQPGSMEWFEAQK
Ga0310914_117185892	3300033289	Soil	IFELYHRDGEAGAQRSKPQPAQTVPQPGSMEWFEAQEKKG
Ga0318519_104718192	3300033290	Soil	GEGIYEWYRQQAKAAQPSKPQPAQTVPQPGSMEWFKAQDKKG
Ga0318519_106713282	3300033290	Soil	GIYELYHQQAKAAAQCSKPQPAQTVPQPGSIEWLKTQANKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F072050

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences