Metagenome / Metatranscriptome Family F072044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	67 residues
Representative Sequence	MRFVLSDLGNCDLVMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Number of Associated Samples	88
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.17 %
% of genes near scaffold ends (potentially truncated)	37.19 %
% of genes from short scaffolds (< 2000 bps)	94.21 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.240 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (61.157 % of family members)
Environment Ontology (ENVO)	Unclassified (61.983 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.38% β-sheet: 8.11% Coil/Unstructured: 63.51%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01041	DegT_DnrJ_EryC1	66.12
PF02604	PhdYeFM_antitox	7.44
PF01934	HepT-like	4.96
PF08843	AbiEii	1.65
PF01909	NTP_transf_2	1.65
PF01402	RHH_1	0.83
PF03102	NeuB	0.83
PF01850	PIN	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	66.12
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	66.12
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	66.12
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	66.12
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	66.12
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	66.12
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	7.44
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	7.44
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	4.96
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	4.96
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	1.65
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.24 %
Unclassified	root	N/A	48.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.24 %
Unclassified	root	N/A	48.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.24 %
Unclassified	root	N/A	48.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.23 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	19.01 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	19.01 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	5.79 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.83 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	12.40 %
unclassified Opitutae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae	5.79 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	2.48 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.83 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12.40 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	5.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2.48 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.83 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.76 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12.40 %
Opitutae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	5.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	2.48 %
Halomonas profundi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas profundi	0.83 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.83 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003474\|NAP4_1114439	Not Available	566	Open in IMG/M
3300003476\|NAP2_1152805	Not Available	521	Open in IMG/M
3300003477\|nap3_10010135	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300003477\|nap3_10096829	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300006870\|Ga0075479_10063797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1556	Open in IMG/M
3300006874\|Ga0075475_10409884	Not Available	544	Open in IMG/M
3300007236\|Ga0075463_10088891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	997	Open in IMG/M
3300007514\|Ga0105020_1239321	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300009001\|Ga0102963_1117228	Not Available	1081	Open in IMG/M
3300009027\|Ga0102957_1232887	Not Available	664	Open in IMG/M
3300009071\|Ga0115566_10043794	Not Available	3086	Open in IMG/M
3300009071\|Ga0115566_10528835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300009071\|Ga0115566_10683108	Not Available	570	Open in IMG/M
3300009076\|Ga0115550_1263567	Not Available	561	Open in IMG/M
3300009077\|Ga0115552_1211335	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	793	Open in IMG/M
3300009132\|Ga0118730_1148126	Not Available	1457	Open in IMG/M
3300009438\|Ga0115559_1096861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1157	Open in IMG/M
3300009445\|Ga0115553_1044219	Not Available	2080	Open in IMG/M
3300009449\|Ga0115558_1357703	Not Available	574	Open in IMG/M
3300009449\|Ga0115558_1442475	Not Available	503	Open in IMG/M
3300009467\|Ga0115565_10185739	Not Available	961	Open in IMG/M
3300009496\|Ga0115570_10110891	All Organisms → cellular organisms → Bacteria → FCB group	1327	Open in IMG/M
3300009496\|Ga0115570_10449550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	543	Open in IMG/M
3300009497\|Ga0115569_10124600	Not Available	1265	Open in IMG/M
3300009497\|Ga0115569_10210996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	891	Open in IMG/M
3300009497\|Ga0115569_10366636	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300009505\|Ga0115564_10473355	Not Available	606	Open in IMG/M
3300009508\|Ga0115567_10386560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	863	Open in IMG/M
3300016724\|Ga0182048_1116805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300016726\|Ga0182045_1333671	Not Available	531	Open in IMG/M
3300016737\|Ga0182047_1055395	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300016740\|Ga0182096_1006213	Not Available	502	Open in IMG/M
3300016741\|Ga0182079_1036439	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300016747\|Ga0182078_10733628	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300016749\|Ga0182053_1482163	Not Available	530	Open in IMG/M
3300016776\|Ga0182046_1422014	Not Available	568	Open in IMG/M
3300017818\|Ga0181565_10814630	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300017818\|Ga0181565_10831624	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300017818\|Ga0181565_11012985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300017824\|Ga0181552_10132521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300017824\|Ga0181552_10210292	Not Available	999	Open in IMG/M
3300017824\|Ga0181552_10563769	Not Available	532	Open in IMG/M
3300017949\|Ga0181584_10719417	Not Available	595	Open in IMG/M
3300017950\|Ga0181607_10118362	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300017950\|Ga0181607_10430347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300017951\|Ga0181577_10461776	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300017952\|Ga0181583_10277209	Not Available	1074	Open in IMG/M
3300017952\|Ga0181583_10748471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	577	Open in IMG/M
3300017956\|Ga0181580_10440341	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300017956\|Ga0181580_10669310	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300017957\|Ga0181571_10311560	Not Available	991	Open in IMG/M
3300017957\|Ga0181571_10409175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	839	Open in IMG/M
3300017957\|Ga0181571_10445672	Not Available	797	Open in IMG/M
3300017957\|Ga0181571_10461859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	780	Open in IMG/M
3300017964\|Ga0181589_10244572	Not Available	1230	Open in IMG/M
3300017964\|Ga0181589_10908493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300017967\|Ga0181590_10539590	Not Available	806	Open in IMG/M
3300017968\|Ga0181587_10382869	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300018036\|Ga0181600_10519545	Not Available	563	Open in IMG/M
3300018036\|Ga0181600_10521544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300018041\|Ga0181601_10148414	Not Available	1439	Open in IMG/M
3300018048\|Ga0181606_10063743	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2446	Open in IMG/M
3300018410\|Ga0181561_10388740	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	636	Open in IMG/M
3300018416\|Ga0181553_10696428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300018417\|Ga0181558_10142729	Not Available	1431	Open in IMG/M
3300018418\|Ga0181567_10685854	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300018420\|Ga0181563_10466197	Not Available	713	Open in IMG/M
3300018421\|Ga0181592_10417321	Not Available	944	Open in IMG/M
3300018421\|Ga0181592_10745490	Not Available	650	Open in IMG/M
3300018421\|Ga0181592_11066664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300018423\|Ga0181593_10707691	Not Available	713	Open in IMG/M
3300018423\|Ga0181593_10932481	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	599	Open in IMG/M
3300018426\|Ga0181566_10152320	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300018426\|Ga0181566_10520260	Not Available	834	Open in IMG/M
3300018426\|Ga0181566_10544080	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300018428\|Ga0181568_10278791	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300018428\|Ga0181568_11016463	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300019253\|Ga0182064_1104731	Not Available	504	Open in IMG/M
3300019272\|Ga0182059_1049140	Not Available	584	Open in IMG/M
3300019272\|Ga0182059_1502279	Not Available	513	Open in IMG/M
3300019274\|Ga0182073_1597258	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300019277\|Ga0182081_1218962	Not Available	652	Open in IMG/M
3300019459\|Ga0181562_10175412	Not Available	1144	Open in IMG/M
3300019459\|Ga0181562_10244073	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	917	Open in IMG/M
3300019459\|Ga0181562_10363954	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300019765\|Ga0194024_1124642	Not Available	596	Open in IMG/M
3300020166\|Ga0206128_1244807	Not Available	663	Open in IMG/M
3300020173\|Ga0181602_10067047	Not Available	1869	Open in IMG/M
3300020173\|Ga0181602_10120542	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300020175\|Ga0206124_10384251	Not Available	524	Open in IMG/M
3300020177\|Ga0181596_10200886	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300020182\|Ga0206129_10137905	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300020194\|Ga0181597_10138735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1266	Open in IMG/M
3300020440\|Ga0211518_10192098	Not Available	1009	Open in IMG/M
3300020442\|Ga0211559_10165060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas profundi	1052	Open in IMG/M
3300020442\|Ga0211559_10183306	Not Available	991	Open in IMG/M
3300020810\|Ga0181598_1327350	Not Available	535	Open in IMG/M
3300021373\|Ga0213865_10042224	All Organisms → cellular organisms → Bacteria → Proteobacteria	2543	Open in IMG/M
3300021958\|Ga0222718_10580718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	529	Open in IMG/M
3300021960\|Ga0222715_10616614	Not Available	558	Open in IMG/M
3300021961\|Ga0222714_10430093	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300022909\|Ga0255755_1108162	Not Available	1199	Open in IMG/M
3300022926\|Ga0255753_1160085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1001	Open in IMG/M
3300022926\|Ga0255753_1392128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300022939\|Ga0255754_10455516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300022939\|Ga0255754_10519782	Not Available	504	Open in IMG/M
3300023116\|Ga0255751_10347493	Not Available	754	Open in IMG/M
3300023117\|Ga0255757_10455912	Not Available	570	Open in IMG/M
3300023119\|Ga0255762_10373905	Not Available	712	Open in IMG/M
3300023175\|Ga0255777_10518411	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300023178\|Ga0255759_10586284	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300023709\|Ga0232122_1100846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	668	Open in IMG/M
3300025694\|Ga0209406_1234934	Not Available	531	Open in IMG/M
3300025699\|Ga0209715_1053798	Not Available	1704	Open in IMG/M
3300025832\|Ga0209307_1176002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300025880\|Ga0209534_10041418	All Organisms → cellular organisms → Bacteria	3037	Open in IMG/M
3300025890\|Ga0209631_10067346	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300025892\|Ga0209630_10158459	Not Available	1142	Open in IMG/M
3300025892\|Ga0209630_10417013	Not Available	576	Open in IMG/M
3300028137\|Ga0256412_1289738	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.52%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.65%
Freshwater	Environmental → Aquatic → Freshwater	0.83%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	61.16%
Pelagic	Environmental → Aquatic → Marine → Pelagic	19.01%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	6.61%
Coastal	Environmental → Aquatic → Marine → Coastal	5.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.65%
River	Environmental → Aquatic → Freshwater → River	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	61.16%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	19.01%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	6.61%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	61.16%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	16.53%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.31%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	3.31%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	2.48%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.48%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.48%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	2.48%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.65%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.65%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.65%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003474	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4	Environmental	Open in IMG/M
3300003476	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 2	Environmental	Open in IMG/M
3300003477	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009132	Combined Assembly of Gp0139359, Gp0139510	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300016724	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016726	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011504BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016737	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016740	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041413YT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016741	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071410CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019253	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101410AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019272	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019277	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023709	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300028137	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NAP4_11144392	3300003474	Estuarine	MQFVLSDLGNCNLVMPKETKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKAMSKINYSIIPN*
NAP2_11528051	3300003476	Estuarine	MRFVISDLGNCDLLMPKKAKSPSMNDKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
nap3_100101353	3300003477	Estuarine	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
nap3_100968291	3300003477	Estuarine	MSREVKSPTRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0075479_100637972	3300006870	Aqueous	MRFVLSDLGNCDLVMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0075475_104098841	3300006874	Aqueous	MRFVLSDLGNCDLVMPKKAKSPTMNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0075463_100888913	3300007236	Aqueous	MSKVSKAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0105020_12393212	3300007514	Marine	MPKEAKSPTRNVKISVKRLNKSQTEASRIESFLKREGFKPISTKDKSRLKKLGFIGMPTE
Ga0102963_11172283	3300009001	Pond Water	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0102957_12328872	3300009027	Pond Water	MQFVLSDHGNCNFLMPKEAKSPTRNVKISVKRLTKSQTEASRIECFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115566_100437944	3300009071	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKEIGFIGMPTE*
Ga0115566_105288352	3300009071	Pelagic Marine	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115566_106831081	3300009071	Pelagic Marine	KEAKSPTRNVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115550_12635671	3300009076	Pelagic Marine	MLFVLIDLGNCNFLMPKEAKSPTINVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115552_12113352	3300009077	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKELGFIGMPTE*
Ga0118730_11481261	3300009132	Marine	KTLKITLVIMSKVSKAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKSRLKKLGFIGMPTE*
Ga0115559_10968612	3300009438	Pelagic Marine	MPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0115553_10442193	3300009445	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLQREVFKPISTKDKARLKKLGFIGMPTE*
Ga0115558_13577031	3300009449	Pelagic Marine	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKERLKKLGFIGMPTE*
Ga0115558_14424752	3300009449	Pelagic Marine	DLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115565_101857392	3300009467	Pelagic Marine	MRFVLIDLGNCNFLMPKEAKSPTINVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115570_101108911	3300009496	Pelagic Marine	MQFVLSVSDLGNCNFIMLKEAKSPTRNVKIYVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115570_104495502	3300009496	Pelagic Marine	MSKVSKVNSPTRRVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGM
Ga0115569_101246002	3300009497	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLNREGFKPISTKDKARLKKLGFIGMP
Ga0115569_102109962	3300009497	Pelagic Marine	MRFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115569_103666362	3300009497	Pelagic Marine	MPKKAKSPTMNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0115564_104733552	3300009505	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKYPTMNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE*
Ga0115567_103865603	3300009508	Pelagic Marine	MSKVSKVNSPTRNVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE*
Ga0182048_11168052	3300016724	Salt Marsh	MRFVLSDLGNCDLVMPKKAKSPTMNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182045_13336712	3300016726	Salt Marsh	MPRKAKSPTMNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182047_10553952	3300016737	Salt Marsh	MPKEAKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182096_10062131	3300016740	Salt Marsh	MLFVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182079_10364393	3300016741	Salt Marsh	MPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLWFIGMSTE
Ga0182078_107336282	3300016747	Salt Marsh	MPKETKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0182053_14821631	3300016749	Salt Marsh	IDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182046_14220142	3300016776	Salt Marsh	MQFVLSDLGNCDLLMPQKSKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181565_108146302	3300017818	Salt Marsh	MQFVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181565_108316241	3300017818	Salt Marsh	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLG
Ga0181565_110129852	3300017818	Salt Marsh	MLFVLSDHGNCNFIMPKEAKSPTMNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMP
Ga0181552_101325212	3300017824	Salt Marsh	MQFVLSVSDLGNCNFIMLKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181552_102102923	3300017824	Salt Marsh	MRFVLSDLGNCDLVMPKKAKSPTMNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181552_105637693	3300017824	Salt Marsh	MQFVLSDLGNCALLMPKKAKSPTMNHKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181584_107194172	3300017949	Salt Marsh	MPKEAKSPTRNVKISVKRLTKIQNEAFRIESFLKREGFNPISTKDKARLKKLWFIGMSTE
Ga0181607_101183622	3300017950	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQIEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181607_104303471	3300017950	Salt Marsh	MPKETKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTESFFRLVDN
Ga0181577_104617762	3300017951	Salt Marsh	MPKETKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181583_102772092	3300017952	Salt Marsh	MLFVLIDLGNCNFLMPKEAKSPARKVKISIKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181583_107484712	3300017952	Salt Marsh	MSKVSKAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181580_104403413	3300017956	Salt Marsh	MSKASKVKSPTRNVKISVKRRTKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181580_106693103	3300017956	Salt Marsh	DHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181571_103115603	3300017957	Salt Marsh	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181571_104091752	3300017957	Salt Marsh	MQFVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLTREDFKPISTKDKARLKKLGFIGMPTE
Ga0181571_104456721	3300017957	Salt Marsh	MQFVLSDLGNCDLLMPKKAKSPTMNDKISVKRLTKSQTEASRIESFLKREGFKPISTKDKGRLKKLGFIGMPTE
Ga0181571_104618592	3300017957	Salt Marsh	MSKASKVKSPTRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPSE
Ga0181589_102445724	3300017964	Salt Marsh	LFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPSE
Ga0181589_109084932	3300017964	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181590_105395901	3300017967	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKL
Ga0181587_103828693	3300017968	Salt Marsh	MSKDSKVKSPTRNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181600_105195452	3300018036	Salt Marsh	MRFVLSDLGNCDLVMPKKAKSPTMNVKISVKRLTKSQTEASRIECFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181600_105215441	3300018036	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGM
Ga0181601_101484142	3300018041	Salt Marsh	MLFVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181606_100637433	3300018048	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQIEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181561_103887402	3300018410	Salt Marsh	MLFVLIDLGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181553_106964282	3300018416	Salt Marsh	MRFVLSDLGNCDLVMPRKAKSPTMNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDK
Ga0181558_101427291	3300018417	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKL
Ga0181567_106858543	3300018418	Salt Marsh	MLFVLSDLGKCNFIMPKEAKSPTTNVKISIKRLSKSQNEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181563_104661971	3300018420	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDK
Ga0181592_104173212	3300018421	Salt Marsh	MQFVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGM
Ga0181592_107454901	3300018421	Salt Marsh	MRFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKL
Ga0181592_110666641	3300018421	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLG
Ga0181593_107076911	3300018423	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181593_109324811	3300018423	Salt Marsh	MSKASKVKSPSRNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGF
Ga0181566_101523204	3300018426	Salt Marsh	MSKASKVKSPSRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPSE
Ga0181566_105202602	3300018426	Salt Marsh	MQFVLSDLGNCNFLMPKEAKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKL
Ga0181566_105440801	3300018426	Salt Marsh	MLFVLSDLGKCNFIMPKEAKSPTTNVKISIKRLSKSQNEASRIESFLKREGFKPISTKDKAGLKKLGFI
Ga0181568_102787913	3300018428	Salt Marsh	MSKASKVKSPTRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPSK
Ga0181568_110164633	3300018428	Salt Marsh	MLFVLSDLGKCNFIMPKEAKSPTTNVKISIKRLSKSQNEASRIESFLKREGFKPISNKDKAGLKKLGFIGMPAE
Ga0182064_11047312	3300019253	Salt Marsh	MQFVICNLGNCDLLMLKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0182059_10491403	3300019272	Salt Marsh	SKASKVKSPTRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPS
Ga0182059_15022792	3300019272	Salt Marsh	MQKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0182073_15972582	3300019274	Salt Marsh	MPKETKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0182081_12189622	3300019277	Salt Marsh	MRFVLSDLGNCDLVMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKGRLKKLGFIGMPTE
Ga0181562_101754122	3300019459	Salt Marsh	MRFVLSDLGNCDLVMPRKAKSPTMNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIG
Ga0181562_102440732	3300019459	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0181562_103639541	3300019459	Salt Marsh	MQFVLSDHGNCNFIMPKEAKYPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0194024_11246422	3300019765	Freshwater	VLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEVSRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0206128_12448072	3300020166	Seawater	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKELGFIGMPTE
Ga0181602_100670474	3300020173	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQIEASRIESFLQREGFKPISTKDKARLKKLGFIGIPT
Ga0181602_101205421	3300020173	Salt Marsh	NAQKAKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTESFFRLVDN
Ga0206124_103842511	3300020175	Seawater	MRFVLIDLGNCNFLMPKEAKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMP
Ga0181596_102008863	3300020177	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTESFFRL
Ga0206129_101379053	3300020182	Seawater	MSKVSKVNSPTRNVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0181597_101387352	3300020194	Salt Marsh	VPKEVKSPARKVKISAKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPSE
Ga0211518_101920982	3300020440	Marine	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGM
Ga0211559_101650602	3300020442	Marine	MPKEVKSPTKMLKHPSVKRITKDQTEASRIESFLKRGGFKLITDRDKARLKKLGIIGIPS
Ga0211559_101833062	3300020442	Marine	MEFVFSNLGNCNFIMLKEAKSPARNVKTSVKWITKNQTEAYRIVSFLKGEGLKLISDKDKERLKKLVFIGIPNE
Ga0181598_13273502	3300020810	Salt Marsh	MHLVLSDHGNCNFIMPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0213865_100422247	3300021373	Seawater	MRFVLIDLGNYNLLLPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0222718_105807181	3300021958	Estuarine Water	MSKVSKAKSPTRNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0222715_106166141	3300021960	Estuarine Water	PKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKNKARLKKLGFIGMPSE
Ga0222714_104300933	3300021961	Estuarine Water	VLSDLGNCNLVMPKETKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0255755_11081621	3300022909	Salt Marsh	MRFVLSDLGNCDLVMPKKAKSPTMNVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARL
Ga0255753_11600852	3300022926	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0255753_13921282	3300022926	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTESFFRLVDN
Ga0255752_102353031	3300022929	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKD
Ga0255754_104555161	3300022939	Salt Marsh	MLFVLIDLGNCNFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARL
Ga0255754_105197822	3300022939	Salt Marsh	LSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0255751_103474932	3300023116	Salt Marsh	MLFVLIDLGNCKFLMPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLG
Ga0255757_104559122	3300023117	Salt Marsh	MQFVLSDLGNCDLVMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0255762_103739052	3300023119	Salt Marsh	MQFVLSDLGNCDLLMPKKSKSPTMNDKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLG
Ga0255777_105184113	3300023175	Salt Marsh	MSKVSKAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKL
Ga0255759_105862843	3300023178	Salt Marsh	MSKASKVKSPTRNVKISVKRITKGQTEASRIESFLKREGFKPISTKDKARLK
Ga0232122_11008462	3300023709	Salt Marsh	MPKEAKSPARKVKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0209406_12349342	3300025694	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTMNNKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0209715_10537981	3300025699	Pelagic Marine	MLFVLSDLGNCDLVMPKKAKSPTRKVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKELGFI
Ga0209307_11760021	3300025832	Pelagic Marine	MRFVLIDLGNCNFLMPKEAKSPTINVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE
Ga0209534_100414185	3300025880	Pelagic Marine	MPKEAKSPTRNVKISVKRLTKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIRMPTE
Ga0209631_100673462	3300025890	Pelagic Marine	MRFVLIDLGNCNFLMPKEAKSPTINVKISVKRLSKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0209630_101584592	3300025892	Pelagic Marine	MRFVISDLGNCDLLMPKKAKSPTMNNKISVKRLTKSQTEASRIESFLQREGFKPISTKDK
Ga0209630_104170132	3300025892	Pelagic Marine	MPKKAKSPTMNNKISVKRLTKSQTEASRIESFLQREGFKPISTKDKARLKKLGFIGMPTE
Ga0256412_12897381	3300028137	Seawater	VNSPTRNVKISVKRLSKSQTEASRIESFLKREGFKPISTKDKARLKKLGFIGMPTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences