Metagenome / Metatranscriptome Family F072036

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072036
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	74 residues
Representative Sequence	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Number of Associated Samples	101
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	29.75 %
% of genes from short scaffolds (< 2000 bps)	85.12 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.603 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.231 % of family members)
Environment Ontology (ENVO)	Unclassified (34.711 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.413 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.73% β-sheet: 0.00% Coil/Unstructured: 36.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.86374
a.2.5.1: Prefoldin	d1fxkc_	1fxk	0.82765
a.47.1.1: STAT	d1uura1	1uur	0.82641
a.47.1.1: STAT	d1bg1a1	1bg1	0.82103
a.7.4.1: Smac/diablo	d1g73a_	1g73	0.81443

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04266	ASCH	9.92
PF01594	AI-2E_transport	4.13
PF06224	HTH_42	4.13
PF08837	DUF1810	3.31
PF12706	Lactamase_B_2	3.31
PF01494	FAD_binding_3	2.48
PF03176	MMPL	1.65
PF02782	FGGY_C	0.83
PF13662	Toprim_4	0.83
PF02607	B12-binding_2	0.83
PF08447	PAS_3	0.83
PF03350	UPF0114	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	9.92
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	9.92
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	9.92
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	4.96
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	4.13
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	4.13
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	3.31
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	2.48
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	2.48
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	2.48
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.65
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.65
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	0.83

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.60 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.99 %
Unclassified	root	N/A	12.40 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	74.38 %
Unclassified	root	N/A	12.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.96 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	63.64 %
Unclassified	root	N/A	12.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.31 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.64 %
Unclassified	root	N/A	12.40 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.64 %
Unclassified	root	N/A	12.40 %
unclassified Thermomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	63.64 %
Unclassified	root	N/A	12.40 %
Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	0.83 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_33887_len_808_cov_56_679455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	858	Open in IMG/M
2140918006\|ConsensusfromContig45938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1461	Open in IMG/M
3300000956\|JGI10216J12902_102918939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3683	Open in IMG/M
3300000956\|JGI10216J12902_113273764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	541	Open in IMG/M
3300000956\|JGI10216J12902_113398573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	941	Open in IMG/M
3300001535\|A3PFW1_10138389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2182	Open in IMG/M
3300001565\|A35518A_1028596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300003324\|soilH2_10221127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2416	Open in IMG/M
3300004156\|Ga0062589_100548155	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300004156\|Ga0062589_102432037	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300004157\|Ga0062590_100658093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	934	Open in IMG/M
3300004157\|Ga0062590_102018195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300004157\|Ga0062590_102342927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	562	Open in IMG/M
3300004463\|Ga0063356_102603605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	777	Open in IMG/M
3300004463\|Ga0063356_104737389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300004480\|Ga0062592_101270899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300004643\|Ga0062591_101061008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	777	Open in IMG/M
3300005328\|Ga0070676_11271295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300005338\|Ga0068868_100840369	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300005354\|Ga0070675_100751355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	890	Open in IMG/M
3300005355\|Ga0070671_101875939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300005356\|Ga0070674_100351296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1191	Open in IMG/M
3300005438\|Ga0070701_10819568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300005441\|Ga0070700_100398311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1034	Open in IMG/M
3300005535\|Ga0070684_101692635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300005578\|Ga0068854_100469145	Not Available	1055	Open in IMG/M
3300005618\|Ga0068864_100467273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1209	Open in IMG/M
3300006881\|Ga0068865_101393739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300009090\|Ga0099827_11980636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300009094\|Ga0111539_12857126	Not Available	559	Open in IMG/M
3300009156\|Ga0111538_12684584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300009157\|Ga0105092_10496115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	700	Open in IMG/M
3300009551\|Ga0105238_11225915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300010147\|Ga0126319_1073398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	668	Open in IMG/M
3300010147\|Ga0126319_1251655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300010154\|Ga0127503_10203250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300010154\|Ga0127503_10352602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300010154\|Ga0127503_10369551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300010397\|Ga0134124_10135846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2179	Open in IMG/M
3300010399\|Ga0134127_10406571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1348	Open in IMG/M
3300010399\|Ga0134127_12334025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300012001\|Ga0120167_1005580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4128	Open in IMG/M
3300012008\|Ga0120174_1003679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5967	Open in IMG/M
3300012010\|Ga0120118_1033285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1348	Open in IMG/M
3300012014\|Ga0120159_1010159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3995	Open in IMG/M
3300012212\|Ga0150985_105453235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1078	Open in IMG/M
3300012469\|Ga0150984_115368927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300012532\|Ga0137373_10474767	All Organisms → cellular organisms → Bacteria → Terrabacteria group	959	Open in IMG/M
3300012891\|Ga0157305_10166409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300012895\|Ga0157309_10352038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012896\|Ga0157303_10285537	Not Available	520	Open in IMG/M
3300012902\|Ga0157291_10094978	Not Available	801	Open in IMG/M
3300012908\|Ga0157286_10111322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	820	Open in IMG/M
3300012912\|Ga0157306_10245392	Not Available	628	Open in IMG/M
3300012914\|Ga0157297_10313053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300012951\|Ga0164300_10676394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300013104\|Ga0157370_12080611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	509	Open in IMG/M
3300013296\|Ga0157374_10366072	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300013306\|Ga0163162_13394868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300013308\|Ga0157375_10160031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2393	Open in IMG/M
3300013427\|Ga0120106_1092997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300013768\|Ga0120155_1013247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2853	Open in IMG/M
3300014968\|Ga0157379_12488051	Not Available	517	Open in IMG/M
3300015077\|Ga0173483_10760129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	555	Open in IMG/M
3300015085\|Ga0167632_1000056	All Organisms → cellular organisms → Bacteria	25671	Open in IMG/M
3300015192\|Ga0167646_1002752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5908	Open in IMG/M
3300015371\|Ga0132258_12593688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1266	Open in IMG/M
3300017695\|Ga0180121_10034744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1777	Open in IMG/M
3300017965\|Ga0190266_11318455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	508	Open in IMG/M
3300018469\|Ga0190270_10130183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2000	Open in IMG/M
3300018469\|Ga0190270_10147311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1905	Open in IMG/M
3300018476\|Ga0190274_10096145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2338	Open in IMG/M
3300018476\|Ga0190274_12830063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300019356\|Ga0173481_10112729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1066	Open in IMG/M
3300019356\|Ga0173481_10234092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	817	Open in IMG/M
3300019361\|Ga0173482_10204443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M
3300019361\|Ga0173482_10783259	Not Available	503	Open in IMG/M
3300020021\|Ga0193726_1353880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300021415\|Ga0193694_1045274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300022195\|Ga0222625_1687293	Not Available	589	Open in IMG/M
3300022756\|Ga0222622_10826780	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300022898\|Ga0247745_1095938	Not Available	509	Open in IMG/M
3300022898\|Ga0247745_1096623	Not Available	508	Open in IMG/M
3300025924\|Ga0207694_11756637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300025961\|Ga0207712_11074561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300025972\|Ga0207668_11780954	Not Available	556	Open in IMG/M
3300025981\|Ga0207640_10392283	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1128	Open in IMG/M
3300025986\|Ga0207658_11136794	Not Available	714	Open in IMG/M
3300026023\|Ga0207677_10212727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1545	Open in IMG/M
3300026118\|Ga0207675_101683865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300026121\|Ga0207683_10196290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1834	Open in IMG/M
3300026121\|Ga0207683_10401223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1262	Open in IMG/M
3300028380\|Ga0268265_10946754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	848	Open in IMG/M
3300028710\|Ga0307322_10239572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300028719\|Ga0307301_10254190	Not Available	574	Open in IMG/M
3300028720\|Ga0307317_10078427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1082	Open in IMG/M
3300028755\|Ga0307316_10077887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1139	Open in IMG/M
3300028771\|Ga0307320_10288233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300028787\|Ga0307323_10103069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1024	Open in IMG/M
3300028787\|Ga0307323_10250065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300028790\|Ga0307283_10032213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1172	Open in IMG/M
3300028802\|Ga0307503_10204242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	938	Open in IMG/M
3300028803\|Ga0307281_10002307	All Organisms → cellular organisms → Bacteria	5292	Open in IMG/M
3300028803\|Ga0307281_10044046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1384	Open in IMG/M
3300028819\|Ga0307296_10055502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2095	Open in IMG/M
3300028819\|Ga0307296_10452012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300028819\|Ga0307296_10463610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	693	Open in IMG/M
3300028828\|Ga0307312_11040480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300028875\|Ga0307289_10063663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1484	Open in IMG/M
3300031054\|Ga0102746_10030807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300031092\|Ga0308204_10234703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300031114\|Ga0308187_10390477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300031366\|Ga0307506_10110679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	914	Open in IMG/M
3300031858\|Ga0310892_10940879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300032012\|Ga0310902_11126413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300032122\|Ga0310895_10521820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300033550\|Ga0247829_10445485	Not Available	1069	Open in IMG/M
3300034115\|Ga0364945_0075487	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300034176\|Ga0364931_0011687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2332	Open in IMG/M
3300034354\|Ga0364943_0021090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2019	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.38%
Host-Associated	Host-Associated	25.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.94%
Plants	Host-Associated → Plants	25.62%
Aquatic	Environmental → Aquatic	7.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.40%
Freshwater	Environmental → Aquatic → Freshwater	6.61%
Floodplain	Environmental → Terrestrial → Floodplain	2.48%
Sediment	Environmental → Aquatic → Sediment	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.13%
Loam	Environmental → Terrestrial → Soil → Loam	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.65%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.65%
Ice	Environmental → Aquatic → Freshwater → Ice	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.26%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.13%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.48%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.23%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	4.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.31%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.48%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.65%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.83%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013427	Permafrost microbial communities from Nunavut, Canada - A15_35cm_18M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01595190	2088090008	Soil	VSEIENDLRATAEDIAADSARLTGIEDEKIRLDARDPRMGELSAESEQIARRMVPKTAAERELADELATTSDPDD
P1_C_01985430	2140918006	Soil	VSEIENDLRATAEDIAADSARLTGIEDEKLRLDARDPRMGELSAESEQIARRMVPKTAAERELADELATTSDPDD
JGI10216J12902_1029189394	3300000956	Soil	VSDTENDLRATAEDIAADAARLAEIEDEKARLGTDDPRLLELSAEGEAIARRLVPKTAAESELATEANGGAA*
JGI10216J12902_1132737641	3300000956	Soil	ELENDLRATAEDIAADATRLAAIELEKARLETDDPRLVELSAEGEEIVRRLVPKTAAERELAAEALATDGGAA*
JGI10216J12902_1133985733	3300000956	Soil	LVPGGIHREADVSELENDLRATAEDIAADATRLAAIEDEKAGLEPDDPRLLELSAEGEAIARRLVPKTAAESELAAEALAIDGGAA*
A3PFW1_101383892	3300001535	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEKAGMEPDDPRFVALSAESERLARRIVPKTAAERELAERASEAGVARD*
A35518A_10285961	3300001565	Permafrost	VSELEHDMRATAESIAADAARLTGIEEEKADLEADDPRLVELSVESDRLARRIVPKTAAERELAEQLAEESGSSG*
soilH2_102211273	3300003324	Sugarcane Root And Bulk Soil	VRTMSDVERDLRATAEDVAADAARIQEIEEEKSRLAASDPRVAELSAESERLARRLVPKTAAERELADAAKAPDPS*
Ga0062589_1005481551	3300004156	Soil	STARRSRSGTSIETAIGSLVSEGNHREADVSELENDLRATAEDIAADATRLAEIEDEKAGLGADDPRLIELSAEGEELARRLVPKTAAESELAAEALATDGGAA*
Ga0062589_1024320372	3300004156	Soil	EHDLQATTEDIAADAARLKAIEEEKGRLGPDDPRVLALSQEGEGIARRLVPKTVAEREIATEARED*
Ga0062590_1006580933	3300004157	Soil	VSELENDLRATAEDIAADATRLAEIEDEKAGLEADDPRLVELSAEGEELARRLVPKTAAESELAAEALATDGGAA*
Ga0062590_1020181951	3300004157	Soil	VSELESDLRATAEDIAADAERLAAIEEEKARLGSDDPRLAQLSAEGEKIARRLVPKTAAESVLANEALANNGQGS*
Ga0062590_1023429272	3300004157	Soil	VSDLDSDLRATAEDIAADAARLTEIENEKARLGTDDPRLVELSAEGEAIARRLVPKTVAERELATEAMAIDGGAA*
Ga0063356_1026036052	3300004463	Arabidopsis Thaliana Rhizosphere	TARRSRSGTSIETAIGSLVPVGIHREAEVSELENDLRATAEDIAADATRLAAIEDEKAGLEPDDPRVLELSAEGEAIARRLVPKTAAESELAAEALATDGGAA*
Ga0063356_1047373891	3300004463	Arabidopsis Thaliana Rhizosphere	MSDLEHDLQATTEDIAADAARLKEIEEEKGRLGPDDPRVLALSQEGEAIARRLVAKTVAEREIATEARED*
Ga0062592_1012708991	3300004480	Soil	DVSELENDLRATAEDIAADAERLAAIEVEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0062591_1010610081	3300004643	Soil	VSELENDLRATAEDIAADAERLAAIEGEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLADEALADATS*
Ga0070676_112712952	3300005328	Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0068868_1008403692	3300005338	Miscanthus Rhizosphere	MAIGSRARVGSPKEADVSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0070675_1007513552	3300005354	Miscanthus Rhizosphere	MAIGSRARVGSPKEADVSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0070671_1018759391	3300005355	Switchgrass Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0070674_1003512963	3300005356	Miscanthus Rhizosphere	GSPKEADVSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0070701_108195682	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVL
Ga0070700_1003983112	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0070684_1016926351	3300005535	Corn Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0068854_1004691453	3300005578	Corn Rhizosphere	MSDLEHDLQATTEDIAADAARLKEIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAERE
Ga0068864_1004672731	3300005618	Switchgrass Rhizosphere	LRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0068865_1013937392	3300006881	Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0099827_119806361	3300009090	Vadose Zone Soil	MSELEHDLRATAEDIAADSSRLTKIEDEKAELAVDDPRLTELSAESEQLARRILPKTAAERDLADRLSRETDSER*
Ga0111539_128571262	3300009094	Populus Rhizosphere	MSDLEHDLQATTEDIAADAARLKQIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREIATEAREA*
Ga0111538_126845842	3300009156	Populus Rhizosphere	LENDLRATAEDIAADATRLAEIEDEKASLETDDPRLVELSAEGEAIARRLVPKTAAESELAAEALATDGGAA*
Ga0105092_104961152	3300009157	Freshwater Sediment	MPDLENDLRATAEDIAADAARLTRIEEEKAGLDGDDPRMAELSAESEMLARRIVPKAAAEREIAEQMQAKVS*
Ga0105238_112259152	3300009551	Corn Rhizosphere	VSELENDLRATAEDIAADAERLAALEEEKARLGTDDPRLAELSAESEAIARRLVPKTAAESVLANEALTDDAAT*
Ga0126319_10733982	3300010147	Soil	LENDLRATAEDIAADAERLAAIEDEKARLGTDDPRLAELSAEGEAIARRLVPKTAAEGVLADEALTDGAAS*
Ga0126319_12516552	3300010147	Soil	VSDLESDLRATAEDIAADAARLAAIEEEKARLETDDPRLVELSAEGEAIARRLVPKTAAENQLVGEAAATDGGAA*
Ga0127503_102032502	3300010154	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLDNQALTDGAAS*
Ga0127503_103526022	3300010154	Soil	MSELEHDLRATTEDIAADSARITEIEREKAGLAADDPKLPELSAETERLARRIVPKAAAESDLVDRLAGHEGSEN*
Ga0127503_103695512	3300010154	Soil	MADMSELEHDLRATTEDIAADSARITEIENEKGRLSADDPKLPELSAETERLARRIVPKAAAESDLVDRLAGQEGPEN*
Ga0134124_101358462	3300010397	Terrestrial Soil	LENDLRATAEDIAADAERLAAIEGEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLADEALADATS*
Ga0134127_104065712	3300010399	Terrestrial Soil	MSDLDHDLRATTEDIAADAARLKQIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREIATEAREA*
Ga0134127_123340252	3300010399	Terrestrial Soil	VSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAE
Ga0120167_10055807	3300012001	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEEAGMAPGDPRPVALSAESERLARRIVPKTAAERELAERASEAGVARD*
Ga0120174_10036795	3300012008	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEKAGMAPDDPRLVELSVESERLARRLVPKTAAERELAERASEPGVATD*
Ga0120118_10332854	3300012010	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEKAGMEPDDPRFVALSAESERLARRIVPKTAAERELAERASAPGVARD*
Ga0120159_10101595	3300012014	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEKAGMAPDDPRLVALSAESERLARRIVPKTAAERELAERASEAGVARD*
Ga0150985_1054532352	3300012212	Avena Fatua Rhizosphere	VSDLENDLRATAEDIAADAARLAAIEKEKEGLETDDPRLLELSAEGEKIARRLVPKTAAESELAGEALATEGGSA*
Ga0150984_1153689272	3300012469	Avena Fatua Rhizosphere	VSDLENDLRATAEDIAADAARLAAIEKEKEGLKTDDPRLLELSAEGEKIARRLVPKTAAESELAGEAFATEGGSA*
Ga0137373_104747671	3300012532	Vadose Zone Soil	MAEQEDDLRATTEDIRSDAEELAAIEDEKARLDSDDPHLRALSRRGERIARRLGPKTAVERELADQ
Ga0157305_101664091	3300012891	Soil	VSELENDLRATAEDIAADAERLAAIEVEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0157309_103520381	3300012895	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAE
Ga0157303_102855371	3300012896	Soil	LENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0157291_100949782	3300012902	Soil	MSDLEHDLQATTEDIAADAARLKEIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREMATEARED*
Ga0157286_101113222	3300012908	Soil	LENDLRATAEDIAADATRLAEIEDEKAGLEADDPRLVELSVEGEELARRLVPKTAAESELAAEALATDGGAA*
Ga0157306_102453921	3300012912	Soil	MSDLEHDLQATTEDIAADAARLKAIEEEKGRLGPDDPRVLALSQEGEAIARRLVAKTVAEREIATEARED*
Ga0157297_103130531	3300012914	Soil	VSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVLADEALAD
Ga0164300_106763942	3300012951	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTD
Ga0157370_120806112	3300013104	Corn Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAALSAESEAIARRLVPKTAAESVLANEALTDDAAT*
Ga0157374_103660721	3300013296	Miscanthus Rhizosphere	TAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0163162_133948681	3300013306	Switchgrass Rhizosphere	VGSPKEADVSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0157375_101600312	3300013308	Miscanthus Rhizosphere	VLENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS*
Ga0120106_10929972	3300013427	Permafrost	MSELEHDLRAAAEDIAADAARLTGIEEEKAGMEPDDPRFVALSAESERLARRIVPKTAAERELAERASEAGVARD*
Ga0120155_10132471	3300013768	Permafrost	MSELEHDLRATAEDIAADAARLTGIEEEKAGMAPDDPRLVALSAESERLARRIVPKTAAERELAERASEAG
Ga0157379_124880511	3300014968	Switchgrass Rhizosphere	SGTSTEMAIGSRARGSSPKEADVSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAALSAESEAIARRLVPKTAAESVLANEALTDDAAT*
Ga0173483_107601292	3300015077	Soil	TAEDIAADAERLAAIEVEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS*
Ga0167632_100005620	3300015085	Glacier Forefield Soil	MMSELEHDLRATADDIADDATRLTRIEREKAGLEADDPRLVALSAESEKLARRIVPKTVAESELVDRLAEGNGSID*
Ga0167646_10027524	3300015192	Glacier Forefield Soil	VIVSDTEDELRATAEDIAADSARLASIEEEKAGLDARDPRMPDLSAESEQIARRLVPKTVAERELADHLQGSATDG*
Ga0167647_10682922	3300015199	Glacier Forefield Soil	MTELHDDLRATADSIAGDAERLAAIEREKETLADDHPRLVELSREAEAIARSLVPKTTAELALAREAGKP*
Ga0132258_125936883	3300015371	Arabidopsis Rhizosphere	VSELESDLRATAEDIAADAERLAAIEEEKARLGSDDPRLAQLSAEGEKIARRLVPKTAAESALANEALATNGQGS*
Ga0180121_100347443	3300017695	Polar Desert Sand	GTAIGSRALSSQKEADVSDLESDLRATAADIAADAARLTAIELEKTGLGSDDPRLLELSAESEAIARRLVPKTIAETELAGATLATDGGAG
Ga0190266_113184552	3300017965	Soil	MADSEEDLRATAEDIAADASRLAYIETENGTLDADEPVLKPLSEEGEQLARGLVPKTAAESELVE
Ga0190270_101301833	3300018469	Soil	VSELENDLRATAEDIAADATRLAAIEDEKAGLEADDPRLVELSAEGEAIARRLVPKTAAESELAAEAVATDGGGA
Ga0190270_101473112	3300018469	Soil	MADSEEDLRATAEDIAADASRLADIETEKVTLAADDPRLKTLSEEGEKLARGLVPKTAAESELVEEVSGSPA
Ga0190274_100961453	3300018476	Soil	MADSEEDLRATAEDIAADASRLADIENKKVTLAPDDPRLKTLSEEGEKLARGLVPKTAAESELVEEVSGSPA
Ga0190274_128300632	3300018476	Soil	VSEGNHREADVSELENDLRATAEDIAADATRLAEIEDEKAGLEADDPRLVELSAEGEELARRLVPKTAAESELAAEALATDGGAA
Ga0173481_101127291	3300019356	Soil	MSDLEHDLQATTEDIAADAARLKAIEEEKGRLGPDDPRVLALSQEGEGIARRLVPKTVAEREIATEARED
Ga0173481_102340922	3300019356	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Ga0173482_102044433	3300019361	Soil	VSELENDLRATAEDIAADAERLAAIEVEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Ga0173482_107832592	3300019361	Soil	MSDLDHDLRATTEDIAADAARLKQIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREIATEARED
Ga0193726_13538801	3300020021	Soil	VSELEHDLRATGEDIAADSARLAAIEAAKARLDAQDPRLVELSAEGEAIAGRLVPKTAAESELVDRLADGEDRPD
Ga0193694_10452742	3300021415	Soil	MSDMSELEHDLRATTEDIAADSARITDIEREKGRLAADDPKLPELSAETERLAQRIVPKAAAESDLVDRLAGHEG
Ga0222625_16872932	3300022195	Groundwater Sediment	VSELENDLRATAEDISADAAKLTRIEDEKAGLDADDPRMAELSAESEQLARRIVPKTVAERELADLANDGGPIN
Ga0222622_108267802	3300022756	Groundwater Sediment	VSELENDLRATAEDIAADAARLNAIEEEKAGLETDDPRLLELSAEGEEIARRLVPKTAAESELAGEAFATEGGAA
Ga0247745_10959381	3300022898	Soil	RGGSPKEADVSELENDLRATAEDIAADAERLAAIEGEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLADEALADATS
Ga0247745_10966232	3300022898	Soil	AGSPKEADVSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Ga0207694_117566372	3300025924	Corn Rhizosphere	VSELENDLRATAEDIAADAERLAALEEEKARLGTDDPRLAELSAESEAIARRLVPKTAAESVLANEALTDDAAT
Ga0207712_110745611	3300025961	Switchgrass Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALA
Ga0207668_117809542	3300025972	Switchgrass Rhizosphere	ATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS
Ga0207640_103922832	3300025981	Corn Rhizosphere	MSDLEHDLQATTEDIAADAARLKEIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREIATEAREA
Ga0207658_111367942	3300025986	Switchgrass Rhizosphere	ENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS
Ga0207677_102127272	3300026023	Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS
Ga0207675_1016838652	3300026118	Switchgrass Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGATS
Ga0207683_101962902	3300026121	Miscanthus Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKASLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Ga0207683_104012232	3300026121	Miscanthus Rhizosphere	DLDHDLRATTEDIAADAARLKQIEEEKGRLRPDDPRVLALSQEGEAIARRLVPKTVAEREIATEAREA
Ga0268265_109467542	3300028380	Switchgrass Rhizosphere	VSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTDGATS
Ga0307322_102395722	3300028710	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGSDDPRLAELSAEGEAIARRLVPKTAAESVLANEALASDGAGA
Ga0307301_102541901	3300028719	Soil	VSELESDLRATAEDISADAAKLTRIEDEKAGLDADDPRMAELSAESEQLARRIVPKTVAERELADLANDGGPID
Ga0307317_100784272	3300028720	Soil	VSELENDLRATAEDIAADAARLAAIEEEKAQLGTDDPRLAELSAEGESIARRLVPKTAAESVLANEALATDGAGA
Ga0307316_100778871	3300028755	Soil	VSDLDNDLRATAEDIAADAARLAAIEEEKARLGTDDPRLLELSAEGEEIARRLVPKTAAENELAGEALAIDGGLA
Ga0307320_102882331	3300028771	Soil	VSELENDLRATAEDIAADAARLAEIEDEKARLGADDPRLVELSAEGEAIARRLVPKTAAESELAAETLATDGGIA
Ga0307323_101030692	3300028787	Soil	VSDLDNDLRATAEDIAADAARLAAIEEEKARLGTDDPRLLELSAEGEEIARRLVPKTAAESELAGEALAIDGGLA
Ga0307323_102500651	3300028787	Soil	VSELENDLRATAEDIAADAERLAAIEEEKAGLGTDDPRLAELSAEGEAIARRLVPKTAAESVLADETLTDGA
Ga0307283_100322133	3300028790	Soil	VSELENDLRATAEDIAADAERLAAIEEEKALLGTDDPKLAALSAEGEAIARRLVPKTAVESVLAKEALADGTAS
Ga0307503_102042423	3300028802	Soil	VSELENDLRATAEDIAADAERLAAIEEETARLGTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALADGTAS
Ga0307281_100023075	3300028803	Soil	VSDLDSDLRATAEDIAADAARLAAIEEEKARLGTDDPRLLELSQEGEEIARRLVPKTAAESELAGEALATDGGLA
Ga0307281_100440461	3300028803	Soil	VSDVDNDLRATAEDIAADAARLTAIEEEKARLGTDDPRLLELSAEGEAIARRLVPKTAAESELAGEALAADGGI
Ga0307296_100555023	3300028819	Soil	VSDVDNDLRATAEDIAADAARLAAIEEEKARLGTDDPRLLELSAEGEEIARRLVPKTSAESELAGEALAADGGAA
Ga0307296_104520123	3300028819	Soil	VSELENDLRATAEDIAADAERLAAIEEEKALLGTDDPKLAALSAEGEAIARRLVPKTAVESV
Ga0307296_104636102	3300028819	Soil	VSDLDNDLRATAEDIAADAARLAAIEEEKARLETDDPRLVELSAEGEAIARRLVPKTAAESQLAGEAVATDGGAA
Ga0307312_110404802	3300028828	Soil	MSELENDLHATAEDIAADAARLTKIEDEKAGLDAGDPRMTELSQEGEELARRIVPKATAERELADLAVSPHGAID
Ga0307289_100636632	3300028875	Soil	VSDLDNDLRATAEDVAADAARLAAIEEEKARLGTDDPRLLELSAEGEEIARRLVPKTAAESELAGEALAIDGGLA
Ga0102746_100308072	3300031054	Soil	VSELENDLRATAEDIAADAARLSAIEDEKARLGADDPRLVELSAEGEAIARRLVPKTAAESELASEALATDGGMA
Ga0308204_102347031	3300031092	Soil	VSDLDNDLRATAEDVAADAARLAAIEEEKARLGTDDPRLLELSAEGEEIARRLVPKTAAENELAGEALAIDGGLA
Ga0308187_103904772	3300031114	Soil	VSELENDLRATAEDIAADAARLAAIEDEKAQLGTDDPRLVELSAEGEAIARRLVPKTAAESELAAETLATDGGIA
Ga0307506_101106793	3300031366	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLGTDDPRLAALSAEGEAIARRLVPKTAAESVLANEALTDGAAS
Ga0310892_109408791	3300031858	Soil	MADSEEDLRATAEDIAADASRLADIESEKATLAPDDPRLKTLSDEGERLARGLVPKTAAESELVDEVSGSPA
Ga0310902_111264131	3300032012	Soil	VSELENDLRATAEDIAADAERLAAIEEEKARLRTDDPRLAELSAEGEAIARRLVPKTAAESVLANEALTDGATS
Ga0310895_105218201	3300032122	Soil	VSELENDLRATAEDIAADAERLAAIEEEKAHLRTDDPRLAELSAEGEAIARRLVPKTAAESALANEALTD
Ga0247829_104454853	3300033550	Soil	MSDLEHDLQATTEDIAADAARLKAIEEEKGRLGPDDPRVLALSQEGEAIARRLVPKTVAEREIATEARED
Ga0364945_0075487_761_967	3300034115	Sediment	LRATAEDIAADAARLAAIEDEKASLGADDPRLLELSAEGEEIARRLVPKTAAESELAAEAVATDGGIA
Ga0364931_0011687_2_223	3300034176	Sediment	ELDDDLRATAEDIAADAAKLNRIETEKSGLEADDPRMVELSAESEQLARRIVPKAAAERKLADLAAEPDGSID
Ga0364943_0021090_1133_1360	3300034354	Sediment	MSELDDDLRATAEDIAADAAKLNRIESEKAGLEADDPRMVELSAESEQLARRIVPKAAAERKLADLAAEPDGSID

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072036

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences