Metagenome / Metatranscriptome Family F072000

Basic Information
Family ID	F072000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	95 residues
Representative Sequence	SAFLSPLALVVVAAIGLAALLLQLRLRKDLSTPVHAPLWLNVLGLVFAVAAVFADVLHFSANLLLVAALGAVVCFGISGTTVLHALRKKKA
Number of Associated Samples	97
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.45 %
% of genes near scaffold ends (potentially truncated)	23.14 %
% of genes from short scaffolds (< 2000 bps)	33.88 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (57.025 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil (16.529 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.810 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.03% β-sheet: 0.00% Coil/Unstructured: 36.97%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF03544	TonB_C	53.72
PF07238	PilZ	9.09
PF06026	Rib_5-P_isom_A	7.44
PF00196	GerE	3.31
PF00326	Peptidase_S9	3.31
PF03572	Peptidase_S41	2.48
PF10531	SLBB	2.48
PF03625	DUF302	2.48
PF13358	DDE_3	0.83
PF02897	Peptidase_S9_N	0.83
PF05163	DinB	0.83
PF04909	Amidohydro_2	0.83
PF00171	Aldedh	0.83
PF02656	DUF202	0.83
PF16363	GDP_Man_Dehyd	0.83
PF00589	Phage_integrase	0.83
PF00072	Response_reg	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	53.72
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	7.44
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	2.48
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	2.48
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.83
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.83
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.83
COG1770	Protease II	Amino acid transport and metabolism [E]	0.83
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.83
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.83
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
All Organisms	root	All Organisms	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
cellular organisms	root	All Organisms → cellular organisms	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.26 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.26 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.83 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.02 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.83 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10020997	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300004080\|Ga0062385_10031730	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300005332\|Ga0066388_103652873	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005435\|Ga0070714_101313623	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300005533\|Ga0070734_10097108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1733	Open in IMG/M
3300005533\|Ga0070734_10281891	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300005534\|Ga0070735_10000301	All Organisms → cellular organisms → Bacteria	58235	Open in IMG/M
3300005538\|Ga0070731_10006706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9118	Open in IMG/M
3300005541\|Ga0070733_11130455	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300005542\|Ga0070732_10195603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1208	Open in IMG/M
3300005602\|Ga0070762_10414228	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005764\|Ga0066903_100181234	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300006050\|Ga0075028_101062556	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300006059\|Ga0075017_100002388	All Organisms → cellular organisms → Bacteria	11726	Open in IMG/M
3300007265\|Ga0099794_10088113	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300009137\|Ga0066709_100013488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7710	Open in IMG/M
3300009792\|Ga0126374_11322759	Not Available	583	Open in IMG/M
3300010043\|Ga0126380_11651686	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300010360\|Ga0126372_12285301	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300010366\|Ga0126379_10130833	All Organisms → cellular organisms → Bacteria → Acidobacteria	2300	Open in IMG/M
3300010366\|Ga0126379_10187730	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300010366\|Ga0126379_10199334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1924	Open in IMG/M
3300010376\|Ga0126381_100324476	All Organisms → cellular organisms → Bacteria → Acidobacteria	2118	Open in IMG/M
3300010376\|Ga0126381_102874185	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300012925\|Ga0137419_11644091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012948\|Ga0126375_10826042	Not Available	737	Open in IMG/M
3300014501\|Ga0182024_11618346	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300017995\|Ga0187816_10244860	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300018023\|Ga0187889_10085098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1592	Open in IMG/M
3300018058\|Ga0187766_11277463	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300018088\|Ga0187771_10241549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	1505	Open in IMG/M
3300018090\|Ga0187770_10257978	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300018468\|Ga0066662_11924373	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300020021\|Ga0193726_1055819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1872	Open in IMG/M
3300021171\|Ga0210405_10073707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2689	Open in IMG/M
3300021405\|Ga0210387_10578178	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300021560\|Ga0126371_10000060	All Organisms → cellular organisms → Bacteria → Acidobacteria	73861	Open in IMG/M
3300023259\|Ga0224551_1044001	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300027548\|Ga0209523_1012889	All Organisms → cellular organisms → Bacteria → Acidobacteria	1570	Open in IMG/M
3300027826\|Ga0209060_10228813	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300027842\|Ga0209580_10196965	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300027842\|Ga0209580_10372295	Not Available	712	Open in IMG/M
3300027857\|Ga0209166_10199409	All Organisms → cellular organisms → Bacteria → Acidobacteria	1076	Open in IMG/M
3300027867\|Ga0209167_10769415	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300027986\|Ga0209168_10000628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	32293	Open in IMG/M
3300029944\|Ga0311352_10248517	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300030503\|Ga0311370_11407515	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300030759\|Ga0265745_1015164	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300031720\|Ga0307469_11400564	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300032783\|Ga0335079_10025687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6749	Open in IMG/M
3300032805\|Ga0335078_10404702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1790	Open in IMG/M
3300032828\|Ga0335080_10285753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1795	Open in IMG/M
3300032892\|Ga0335081_10162091	All Organisms → cellular organisms → Bacteria	3173	Open in IMG/M
3300032892\|Ga0335081_11058008	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300033004\|Ga0335084_11584386	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.95%
Aquatic	Environmental → Aquatic	14.05%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.64%
Freshwater	Environmental → Aquatic → Freshwater	9.92%
Sediment	Environmental → Aquatic → Sediment	3.31%
Peat	Environmental → Terrestrial → Peat	3.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.83%
Loam	Environmental → Terrestrial → Soil → Loam	9.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.83%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.31%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.83%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.83%

Habitat	Taxonomy	Distribution
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	16.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.57%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.13%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.65%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.83%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.83%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018519812	3300000364	Soil	LSPLALVVVAAIGLAALLLQLRLRKDMDKSIHPPLSLNVLGLVFAIGAVIADFLHLSAKVMLVAALAAVLCFAVSGVSVLRSLRKQKS*
JGI26341J46601_100209973	3300003219	Bog Forest Soil	ALALVVIYTSRAAFFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNVLGLVFAIGAVFDFHFGADLMLVAALGSVICFAISGTAILHALRKKKV*
Ga0062385_100317301	3300004080	Bog Forest Soil	LALVVIYTSRSAFSSPLALVVVAAIGLTALLLQLRLRKDLSPRVRAPLWLNVVGLVFAVAAIFADVLHFSANLMLVAALGAVVCFAISGTAVLRELRKKKI*
Ga0066672_110047951	3300005167	Soil	VIYTNRSAFNSPLALVVVASIGLAALLLQLRLRKDRSAEVRAPLWLNLMGLVFAIAAVLADMLHFAPNFMTVAALGSVVCFAISGTAVLRALRKKKI*
Ga0066388_1036528731	3300005332	Tropical Forest Soil	FLLALVVIYTSQRAFFSPIALVVVAAIGLAALLLQLRLHRGLGVAVRAPLWLNVLGVGFAIAAVSGDVLHVRPTLMLIVSLGAVICFAASGIVVLDALRRQQT*
Ga0070714_1007316151	3300005435	Agricultural Soil	PAFFSPLALVVVAAIGLAALLLQLRLRKDLTAEIRAPLWLNVLGLLLAIAAVFADMLHMHSNFMFIAALGAVVCFAISGIKVIHSMRRQKT*
Ga0070714_1013136232	3300005435	Agricultural Soil	ALALVVIYTSRSAFSSPLALVVVAAIGLAALLLQLRLRKDLTTQVRAPLWINILGLVFAVAAVVADGFHFSANLMLVAALGAVVCFAISGTAILHNLRKKKQP*
Ga0070734_100971082	3300005533	Surface Soil	MALAVVVIYTSRPAFSSPLAMVVVAAIGLAALLLQLRLRKDLGTPVHAPLWLNVLGLLFAVTAVFADVLHLSAGWMLVASLGAVISFGISGVAVLHALRKKN*
Ga0070734_102818912	3300005533	Surface Soil	LLALALVVIYTSRGAFLSPLALVVVAAIGLAALLLQLHLRKDFSTRVHAPLWLNLLGLVCAIGAVVADFLHFSANLLLVAALGAVVCFAISGVTVLKALRKRNL*
Ga0070734_105905801	3300005533	Surface Soil	SSPLAMVVVAAIGLAALLLQLRLRKDLQSPIHTPLWLNILGLLFALAVVFGDLLRLKPAPMMVAALGAVLCFGVSGIVVFQALRKRKI*
Ga0070735_1000030127	3300005534	Surface Soil	LLSLALVVIYTTRGAFLSPLALVVVAAIGLAAMLLQVRLHKDVSTRIRTPLWLNALGLVCALGAVLADFFHLSANLSMVTALGAVVCFAISGVRVLRTLRKRNN*
Ga0070731_100067067	3300005538	Surface Soil	VLYTSRSAFTSPLALVVVATIGIAALLLQLRLRKDLSAEQSTRVRAPLWLNAIGVVFAIAAVFADIMRLSANFMLVAALGSVVCFAVSGTAILRALRKNTP*
Ga0070731_100396823	3300005538	Surface Soil	VIYTTRRAFLSPLALVVVAAIGLAAVLLQLRLREDVRAGIRAPLWLNVLGLVCAIGAVVADFLHLSTNVLLLVALGAVACFAISGVRILQAFRKRNS*
Ga0070733_106604932	3300005541	Surface Soil	MVVVAAIGLAALLLQLRLRNDPVSPVRAPLWLNALGLLFAVAAVFADHLHLSGNLMVVAALGAVVCFGISGTVVLRALRKPRA*
Ga0070733_111304552	3300005541	Surface Soil	LVVIYTTRGAFLSPLALVVVAAIGLAAVLLQLRLRKDVRAGIRAPLWLNVLGLVCAIGAVVADFLHLSTNLLLLVALGAVLCFAISGVSVLKAFRKRNS*
Ga0070732_101956032	3300005542	Surface Soil	LLALALVVIFTSRRAFMSPLALVVVAAIGLAAILLQLRLRRDLLAPVRAPFWLNVLGLVCAVAAVFADVLHLTSNLMLITALGAVICFAISGMTVLHALRGGKG*
Ga0070732_109212682	3300005542	Surface Soil	TSHSAFLSPLALVVVAAIGLAALLLQIRFRKDMNNPVRAPLWLNVLGLICAVAAVSADIFHLSPNLLQVAALGAVICFGISGTAVLHALHKKKA*
Ga0066692_101859691	3300005555	Soil	AFLSPLALLVVAAIGLAALLLQLRLRQDLDRKIHAPLWLNVLGLIFAVSAVVTDFLHLSSNIMLVAALAAVVCFAFSGMSVLRSLRKQKS*
Ga0070762_104142281	3300005602	Soil	MLLLALALVVIYTTRGAFRSPLAVVVVAAIGLAALLLQLRLRKDLSSRIRAPLWLNVLGLILAITAVLADFLHLRANVLLVAALGAVVCFAVS
Ga0070740_103490862	3300005607	Surface Soil	VVIYTSRPAFASPLALVVVAAIGLAALLVQLRIGKNKHASLRSPLWLNVTGLILAVAAVFADYLRLNSNFMLVAALGAVVCFGISGAVILRDLRKTKL*
Ga0066903_1001812342	3300005764	Tropical Forest Soil	VLALVVIYTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHPPLWVNVLGLIFALLAVWADFAHVKASVMLLAALGAVICFSISGIAVLRSLRRQKT*
Ga0066787_100352162	3300005950	Soil	SLLALVVVAAIGLAALLLQLRLRRDLPARVKAPVWLNTLGLVFAIASVFADLLHFGAPLMQVAALAAVVCFAVSGIIVLDALRKRPRAGQ*
Ga0075028_1010625562	3300006050	Watersheds	LVVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLRHDLRAPVRAPLWLNVLGIAFAVTAVLADIAHKPTLLLLAALGAVVCFSVSGIIVLDALRKQRT*
Ga0075029_1003160662	3300006052	Watersheds	ALVVLYTGQRAFLSPLALLVVAAIGLAALLLQLRLRKDLDRRIRAPLWLNVLGLIFAVGAVLIDFLHLSANMMLIAALAAVFCFAASGMSVLRSLRKPKI*
Ga0075029_1003528641	3300006052	Watersheds	VLYTSRRAFLSPLALVVVAAIGLAALLLQIRLRKDVNSGVRAPIWVNVLGLIFALAAVCADFAHFGANLMVVAALGAVICFSVSGISVLRALRKQKT*
Ga0075017_1000023887	3300006059	Watersheds	MALALVVLYTSRRAFLSPLALVVVAAIGLAALLLQIRLRKDVNSGVRAPIWVNVLGLIFALAAVCADFAHFGANLMVVAALGAVICFSVSGISVLRALRKQKT*
Ga0099794_100881132	3300007265	Vadose Zone Soil	LVALALVVIYTDRGAFFSPIALVVVAAIGLAALLLQLRLRQGLSPTIRAPLWLNVLGVVLAIAAVMADVWHVSTLMLITALGAVVCFALSGIVVLDALRRQRT*
Ga0102924_10904593	3300007982	Iron-Sulfur Acid Spring	AVVVIYTTRPAFFSPLALVVVAAIGLAALLLQLRLRKDLTAEVRAPLWLNVLGLLLAIAAVFADLLHMRSNFMFIAALGAVVCFAISGIKVIHSMRRQKT*
Ga0066709_1000134888	3300009137	Grasslands Soil	LVALALVVIYTSRGAFFSPIALVVVAAIGLAALLLQLRLRQGLSASVRAPLWLNVLGVVFGMAAVLADVLHVSPTLMLIAALGAVVCFAVSGIVVLDALRRQRT*
Ga0126374_113227591	3300009792	Tropical Forest Soil	VLALVVIYTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHPPLWVNVLGLIFALLAVWADFAHVKASVMLLAALGAVICFSISGIAVLRSLR
Ga0116219_106480232	3300009824	Peatlands Soil	VAAIGLAALLLQIRLRNNLGSPVRAPVWLNVLGVLCAVIAVFADILRLSSAWMLVAALGAVVCFAISGFLVLKALRKKRS*
Ga0126380_116516862	3300010043	Tropical Forest Soil	YTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHPPLWVNVLGLIFALLAVWADFAHVKASVMLLAALGAVICFSISGIAVLRSLRRQKT*
Ga0126373_102007262	3300010048	Tropical Forest Soil	VIYTNRRAFMSPLALVVVAAIGLAALLLQLRLRNDISPAVHAPLWLNVVGVVFAIIAVCADIRHLGPNIMMVAALGAVVCFAVSGTTVLHALRKTK*
Ga0126372_122853012	3300010360	Tropical Forest Soil	LSLVVIYTRRGAFLSPLALVVVAAIGLAALLFQLRLRRDRDTNVHAPLWVNVLGLIFAIGAVIADFFHLSANSMLVAALAAVVCFAVSGISVLRSLRKR*
Ga0126379_101308331	3300010366	Tropical Forest Soil	SLVVIYTRRGAFLSPLALVVVAAIGLAALLFQLRLRKDMDTTVHPPLWLNILGLMFAVGAVIADFAHLRASFMLVAALAAVVCFAVSGVRVLRSVRKP*
Ga0126379_101877303	3300010366	Tropical Forest Soil	LVVIYTSQRAFFSPIALVVVAAIGLAALLLQLRLHRGLGVAVRAPLWLNVLGVGFAIAAVSGDVLHVRPTLMLIVSLGAVICFAASGIVVLDALRRQQT*
Ga0126379_101993343	3300010366	Tropical Forest Soil	VVVLYTGRGAFLSPLALVVVAAIGIAALLLQLRLRKDVSTSVRAPLWLNVLGLVFAIGAVSADFLHLSANVMMVAALGAVVCFAASGVVVIRALRQQGQ*
Ga0126381_1003244761	3300010376	Tropical Forest Soil	LALSLVVIYTSRRAFLSPLALVVVASIGLAALLLQLRLRNDLSSTVHAPMWLNVLGLIFAVGAVCADFLHLSANAMMVAALGAVVCFAVSGVTVLRALRKKK*
Ga0126381_1018381232	3300010376	Tropical Forest Soil	ALVVVAAIGLAALLLQLRLRRDVRTSVHAPFWLNVLGLICAIAAVLADVLHLTSNLMLMSALGAVICFAISGVTVLHALRGGKG*
Ga0126381_1028741852	3300010376	Tropical Forest Soil	ALVVIYTSRSAFFSPLALVVVASIGLAALLLQLRMRRDLDRQIHSPIWLNVLGLVFAIAAVIADFLHVNSNFMIVAALGAVISFAVSGIVVLDAFRKRKG*
Ga0150983_156554461	3300011120	Forest Soil	AFSSPLALVVVAAIGLAALLLQLRLRKDLSTPVRAPLWLNVLGLVFAIGAVCADIFHLSANVMLVAALGAVVCFAVSGTAVLHALRKPRA*
Ga0137383_109225802	3300012199	Vadose Zone Soil	GQGAFISPLALLVVAAIGLAALLLQLRLRQDLDRKIHAPLWLNVLGLIFAVSAVVTDFLHLSSNIMLVAALAAVVCFAFSGMSVLRSLRKQKS*
Ga0137366_100321951	3300012354	Vadose Zone Soil	TSPSAFSSPLALVVVAAIGLAALLLQIRLRKDLTTQVRAPLWINVLGLIFAIAAIVADIFHLSATAKLVAALASVVCFAASGTAILRDLRKKKS*
Ga0137419_116440911	3300012925	Vadose Zone Soil	LALVVIYTSRGAFFSPIALVVVAAIGLAALLLQLRLRQGLSPTVRAPLWLNVLGVVFAIAAVFADMLHVSPTLMLVAALGAVLCFAISGIVVLDALRRQRT*
Ga0126375_108260422	3300012948	Tropical Forest Soil	VLALVVIYTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHPPLWVNVLGLMFALLAVWADFAHLKASVMLLAALGAVICFSISGIAVLRSLRRQKT*
Ga0126369_106858391	3300012971	Tropical Forest Soil	LVVIYTSRGAFLSPLAMVVVAAIGLAALLLQLRLHKDLTDQIHAPLWLNVLGLVFAVSAVIADLLQLHPNLLILAALGAVVCFAISGVRVLQGIRRQRK*
Ga0182024_116183461	3300014501	Permafrost	ALALVVIYTSRSAFLSPLALVVVAAIGLAALLLELRLRKDLSIRAPLWLNVLGLIFAVAAVFADFLHLGANLLLLAALGAVVCFGVSGATVLHALGKKRI*
Ga0187801_100578412	3300017933	Freshwater Sediment	LALVVVAAIGLAALLLQLRLRKDLTVSVHAPLWLNVLGLIFAVCAVFADLLHLSPNLMLVAALGAVVCFAVSGTAVLRALRKKRN
Ga0187819_102776282	3300017943	Freshwater Sediment	LSPLALVVVAAIGLAALLLQLRLRRDSDKSIHAPLWLNVLGLIFAIGAVLVDFLHLRANIMLVAALGAVICFAVSGVAVLHSVRKQKI
Ga0187817_100135973	3300017955	Freshwater Sediment	MSPLALVVVAAIGLAALLLQLRLRKDLGSPIRAPLWLNVLGLLFAISAVLADILHLSSSVMMVSALGAVVCFAISGITVLRTLRKKQ
Ga0187817_105283061	3300017955	Freshwater Sediment	ASPLAIVVLAAIGLAALLLQLRLRKDLSTPVRAPFWLNVAGLGFALAAVFADVLHLSPRHLMMAALGAVVCFGVSAKVVLRALRQPRS
Ga0187779_111856742	3300017959	Tropical Peatland	LALVVVAAIGLAALLLQLRLRKDLDRSIHAPLWLNVLGLVFAIGAVFADFLHLRPNFMLVAALGAVLCFSISGVTILHSLRKQKS
Ga0187781_101586853	3300017972	Tropical Peatland	TSRNAFLSPLAVVVVAAIGLAALLIELRLRRDIAATVRAPLWLNVVGLAFAVCAVCADVFHLSASFLQVAALGAVLCFAVSGAVVYRTLRKTRP
Ga0187782_109232372	3300017975	Tropical Peatland	VVVIYTTSAAFFSPLALVVVAAIGLAALLLQLRLRHDIGPGVRAPLWLNVLGLLFALAATFADVLRLSSNRMQIAALGAVICFAASGMVVLHALRKTK
Ga0187816_102448602	3300017995	Freshwater Sediment	LVVIYTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDAPSGVHAPLWLNVLGLTFAVTAVIADIFHLSANVMMVAALGSILCFAVSGTAVLHALRKKRN
Ga0187767_103248832	3300017999	Tropical Peatland	GLAALLLQLRLRKDVNSGVHAPLWVNILGLIFALAAVCADFAHFGANVMVVAALGAVVCFSVSGVSVLRSLRKQKI
Ga0187889_100850982	3300018023	Peatland	VVIYTSRSAFFSPLALVVVAAIGLAALLLELRLRKDIGTPVHAPLWLNVAGLVLAFAAILADVFRLSATLLQVAALGAVLCFAISGVVVLRALRKPRP
Ga0187851_103371361	3300018046	Peatland	IGLAALLLQLRLRSKNKDQSATQVHAPLWLNVLGLVFAIAAVFADVLHLSANLMLVAALGAVICFAISGTAVLHALRKERR
Ga0187858_101036284	3300018057	Peatland	SAFLSPLALVVVAAIGLAALLLQLRLRKDLSTPVHAPLWLNVLGLVFAVAAVFADVLHFSANLLLVAALGAVVCFGISGTTVLHALRKKKA
Ga0187766_112774632	3300018058	Tropical Peatland	ALALVVIYTSRSAFFSPLALVVIAAIGLAALLAELRLRRDIGAPVRAPLWLNVVGLIFAVSAVFADVLRLSASLLQVAALGAVACFAVSGVVVLRALRRPRA
Ga0187766_114656562	3300018058	Tropical Peatland	RPAFSSPHALVVVAAIGLAALLLQLRLRKDAQTPVRAPLWLNVVGLALAVVSIFADVLHLRATLMTIAALGAVLCFAMSGIVVFQALRKRRIGRNKVEVP
Ga0187772_110434821	3300018085	Tropical Peatland	IYTSRAALLSPLALVVVAAIGLAALLLQLRLRSDVSASVRTPVLLSGLGLIFAGGAVFADRLHLSANLMQVAALGAVLCFAIGGMMVLHRLRRR
Ga0187771_102415491	3300018088	Tropical Peatland	LALALVVIYTSRSAFLSPLALVVVAAIGLAALLLEIRLRRDVGSPVRAPLWLNVMGLIFAVGAVFADVLHLTTNVLQITALGAVACFAVSGLVVFRALRRGHR
Ga0187770_102579781	3300018090	Tropical Peatland	LVVIYTSRTAFLSPLALVVVAAIGLAALLLELRLRRDVVAPVHAPLWLNVVGLIGAISAIIADVFRLNANFLQVAALGAVACFAVSGVVVLRALRKARS
Ga0187770_106640222	3300018090	Tropical Peatland	FLSPLALVVVAAIGLAALLLQLRLRREAGIPVRAPVWINGLGLIFAVAAIFADALRLRVAMLHVAALGAVVCFAISGGVVMHGLRKHRS
Ga0066662_119243732	3300018468	Grasslands Soil	LALALVVIYTSRPAFSSPLALVVVASIGLVALLLQLRFRTGTGSHVRSPLWLNVLGLLFAIAAVFADHLQLKGNLMVVAALGAVVCFGISGARVLHELRKKKI
Ga0193726_10558192	3300020021	Soil	VVIYTSRSAFYSPLALVVVAAIGLAALLLQLRFRKEGVGRVRAPLWLNVLGLIFALGAVIADIVHLSANVMLVAALGSVLCFAISGTAVLHALRKN
Ga0210399_108942821	3300020581	Soil	LVVLYTGQRAFLSPLALLVVAAIGLAALLLQLRLRKDLDRQIHAPMWLNVLGLIFAVSAVLTDFLHLSSNIMLVAALAAVVCFAFSGMSVLRSLRKQKS
Ga0210395_110915191	3300020582	Soil	SAFLSPLALVVVAAIGLAALLLELRLRKDLSIRAPLWLNVLGLIFAGAAVFADFLHLGANLLLLAALGAVVCFGVSGATVLHALGKRRI
Ga0210404_101809952	3300021088	Soil	LALLVVAAIGLAALLLQLRLRKDLDRKIHAPLWLNVLGLIFAVSAVVTDFLHLSSNIMLVAALAAVVCFAFSGMSVLRSLRKQKS
Ga0210400_115450762	3300021170	Soil	IYTGPAAFSSPLALVVVAAIGLAALLLQLRMRRDLGGTVRAPLLLNVLGLVFAVGAVVADIFHFSARVLLAASLGAVGCFAISGVIVFRALRRPRA
Ga0210405_100737073	3300021171	Soil	VVIYTSRSAFSSPLALVVVAAIGLAALLLQLRLRKDVSDVRAPLWLNVLGLVFAVAAVFADIVHFSTNLMLIAALGSVVCFAISGTVVLRALRKKKL
Ga0210393_108090001	3300021401	Soil	AIGLAALLLQLRLRKDLSAQPSNQVRAPLWLNVLGLVFAMAAVLADVLHLSPNAMLIAALGAVFCFAISGTTVLRALRKKRN
Ga0210387_102028151	3300021405	Soil	VVVIYTSRPAFFSPLAIVVVAAIGLAALLLQLRLRRDLNAPVHAPLWLNVLGLLFAVAAVFADVLHLSSTLMLIATLGAVICFSTSGIAVLHALRKPRA
Ga0210387_105781781	3300021405	Soil	VVVIYTPRSAFFSPLALVVVAAIGLVALLLQNRLRRDIVAPVRAPLWLNVLGLLFAIGAVAADLLHLSANIRLIAALGAVVIFAISGIIVIDALRKQRS
Ga0210384_117716101	3300021432	Soil	FFSPLALVVVAAIGLAALLLQLRLRKDLGTPVRAPLWLNVTGVAFAIGAVVADIRHLSANVMLVAALGAVVCFAVSGAAVLHALRKSRT
Ga0210390_112054012	3300021474	Soil	RAFLSPLALLVVAAIGLAALLLQLRLRKDLDRRIHAPLWLNVLGLIFAVSAVLTDFLHLSSNIMLVVALAAVVCFAFSGMSVLRSLRKQKN
Ga0126371_1000006028	3300021560	Tropical Forest Soil	VVIYTSRGAFLSPLALVVVAAIGLAALLLQLRLHKDLVDQIRAPLWLNVLGLLFAISAVVADILHLRISLLIVAALGAVVCFAISGVRVLQGIRRQRK
Ga0126371_138594121	3300021560	Tropical Forest Soil	SPLALVVVAAIGLAALLFQLRLRRDTDAKVHAPLWVNVLGLIFAIGAVIADFFHLGANSMLVAALAAVVCFAVSGISVLRSLRKR
Ga0213853_111296253	3300021861	Watersheds	YTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDIGVPVRAPLGLNVLGLIFAVAAIFADVLRLSPGVLQVAALGAVVCFAISGIVVLHALRKLRP
Ga0224551_10440012	3300023259	Soil	ALALVVIYTSRSAFLSPLALVVVAAIGLAALLLELRLRKDLSIRAPLWLNVLGLIFAVAAVFADFLHLGANLLLLAALGAVVCFGVSGATVLHALGKKRI
Ga0208848_10578062	3300025509	Arctic Peat Soil	TSHSAFSSPLALVVVAAIGLAALLLQIRLRKDVSVPVHAPLWLNVLGLIFALAAVFADLFHFSPNLMLVAALGAVVCFAVSGTSVLRALRKKKT
Ga0207663_103167302	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VVVYTNSRAFSSPLAIVVVAAIGLAALLVQLRFRKDIGVPVHAPLWLNVLGLLCAVAAVFADVLHFSANLMQVSALGAVVCFAISGVVVLRALRKKKT
Ga0207663_104677852	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VVAAIGLAALLLQLRLRKDLTAEVRAPLWLNVLGLLLAIAAVFADLLHMHSNYMFIAALGAVVCFAISGIKVIHSIRKQKI
Ga0207700_103383762	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MFTSRAAFSSPLALVVVAAIGLAALLLQLRLRKDVNARIHAPLWLNVLGLLFAVAAVFADHLHFSASLMIIAALGAVVCFAVSGIVVLRNLRKPRE
Ga0208240_10165482	3300027030	Forest Soil	FFSPLALVVVAAIGLAALLLELRFRKDVSPRVRAPLWLNVLGLVFALGAVFADLFHAGANLMLVASLGAVGCFAISGIVILQALRKPRP
Ga0207776_10172111	3300027035	Tropical Forest Soil	SSPLALVVLAAIGLAALLLQLRLRKDLRTAVHPPLWLIILGLVFAMAAVFADIRPVSANFLLVATLGAVACFAISGISVLHALRKKK
Ga0209523_10128891	3300027548	Forest Soil	ALALVVLYTGQRAFLSPLALLVVAAIGLAALLLQLRLRKDLDRKIHAPLWLNVLGLIFAISAVLTDFLHLSSNLMLVAALAAVFCFAFSGMSVLRSLRKPKS
Ga0209446_10124511	3300027698	Bog Forest Soil	YTSRSAFSSPLALVVVAAIGLTALLLQLRLRKDLSPRVRAPLWLNVVGLVFAVAAIFADVLHFSANLMLVAALGAVVCFAISGTAVLRELRKKKI
Ga0209811_100269601	3300027821	Surface Soil	YTSRGAFFSPLALVVVAAIGLAALLLQLRLRKDVNSGIHAPLWVNVLGLIFAMLAVCADFARLKANIMLVAALGAVICFSISGIAVLRSLRKQKT
Ga0209060_102288131	3300027826	Surface Soil	MALAVVVIYTSRPAFSSPLAMVVVAAIGLAALLLQLRLRKDLGTPVHAPLWLNVLGLLFAVTAVFADVLHLSAGWMLVASLGAVISFGISGVAVLHALRKKN
Ga0209060_105267522	3300027826	Surface Soil	AFSSPLAMVVVAAIGLAALLLQLRLRKDLQSPIHTPLWLNILGLLFALAVVFGDLLRLKPAPMMVAALGAVLCFGVSGIVVFQALRKRKI
Ga0209580_101969652	3300027842	Surface Soil	LLALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDLGSPVRAPLWLNVLGVLCAIAAVLADILHLSPNLLQVAALGAVVCFGISGTTVLHALHKKKA
Ga0209580_103722951	3300027842	Surface Soil	LLALALVVIFTSRRAFMSPLALVVVAAIGLAAILLQLRLRRDLLAPVRAPFWLNVLGLVCAVAAVFADVLHLTSNLMLITALGAVICFAISGMTVLHALRGGKG
Ga0209166_101994092	3300027857	Surface Soil	LLALALVVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDLGSPVRAPLWLNVLGVLCAIAAVLADILHLSPNLLQVAALGGVVCFGISGTTVLHALHKKKA
Ga0209167_100089502	3300027867	Surface Soil	MVVVAAIGLAALLLQLRLRNDPVSPVRAPLWLNALGLLFAVAAVFADHLHLSGNLMVVAALGAVVCFGISGTVVLRALRKPRA
Ga0209167_107694152	3300027867	Surface Soil	LVVIYTTRGAFLSPLALVVVAAIGLAAVLLQLRLRKDVRAGIRAPLWLNVLGLVCAIGAVVADFLHLSTNLLLLVALGAVLCFAISGVSVLKAFRKRNS
Ga0209168_100006284	3300027986	Surface Soil	LLSLALVVIYTTRGAFLSPLALVVVAAIGLAAMLLQVRLHKDVSTRIRTPLWLNALGLVCALGAVLADFFHLSANLSMVTALGAVVCFAISGVRVLRTLRKRNN
Ga0311368_108111612	3300029882	Palsa	SPLAIVVVAAIGLAALLLQLRLRKDIGTAIRSPLWLNVLGLLFAVAAVFADALHLNANMMLIASLGAVVCFAVSGIVVLRALRNRN
Ga0311352_102485171	3300029944	Palsa	LALVVLYTSRPAFSSPLAIVVVAAIGLAALLLQLRLRKDIGTAIRSPLWLNVLGLLFAVAAVFADALHLNANMMLIASLGAVVCFAVSGIVVLRALRNRN
Ga0311370_114075151	3300030503	Palsa	LALVVIYTSGRAFSSPLALVVVAAIGLAALLLQLRLRKDLRVSVRAPLWLNVLGVVFAIVAVAGDIRRSSANFMLVAALGAVACFAVSGAVVLRALRKKD
Ga0265745_10151642	3300030759	Soil	IALALVVIYTSRSAFLSPLALVVVAAIGLAALLLELRLRKDLTIRAPLWLNVLGLIFAVAAVFADFLHLGANLLLLAALGAVVCFGVSGATVLHALGKKRI
Ga0307476_104585712	3300031715	Hardwood Forest Soil	VIYTSRGAFFSPLAIVVVAAIGLAALLLQLRLRKDVGFRVHAPVWLNVLGLLFAVCAIFSDKFRLTAGLLQVAALGAVVCFAISGVVVLHMLRKHRV
Ga0307474_102616562	3300031718	Hardwood Forest Soil	AAFSSPLALVVVAAIGLAALLLQLRLRKDLTTQASARPSNDVRAPLWLNVLGLVFAISAVLADVLRLSPNAMLIAALGAVVCFAISGTAVLRALRKKRS
Ga0307474_105312261	3300031718	Hardwood Forest Soil	PLALVVVAAIGFAALLLQLRLRKDQSNPVRAPLWLNVLGLVFAISAVFADVLHLSAAVLLIAALGAVVCFAISSVTVLHALRKKKV
Ga0307469_114005642	3300031720	Hardwood Forest Soil	NRGAFFSPIALVVVAAIGLAALLLQLRLRQGLSPRVRAPLWLNVLGIVFAICAVFADVLHVGPALLLIGALVAVVCFAISGIIVLAALRKPQT
Ga0307473_107987511	3300031820	Hardwood Forest Soil	GQRAFVSPLALLVVAAIGLAALLLQLRLRKDLDRKIHAPLWLNVLGLIFAVSAVMTDFLHLRSNIMLVAALAAVVCFAFSGMSVLRSLRKQKS
Ga0307478_112625031	3300031823	Hardwood Forest Soil	VVIYTSRSAFLSPLALVVVAAIGLAALLLQLRLRKDLPATVRAPLWLNVLGLVFAIAAVFADFLRLGPNLLLVAALGAVICFGVSGTSVLHALRRKKA
Ga0307479_112171882	3300031962	Hardwood Forest Soil	KRPAFSSPVALVVVAAIGLAALLLQLRLRKDPQVRAPLGLNVLGLVFAIAALFADVLHLSANLLLIAALGAVGCFAISGTSVLYALRKKKI
Ga0335079_100256875	3300032783	Soil	LLALALVVIYTSRTAFSSPLALVVVAAIGLAALLLELRLRKDGHSSVRAPLWLNVLGLIFAIVAVFADRIHLNGTLMLVAALAAVVCFGVSGSVVLHSLRRRK
Ga0335078_1000936419	3300032805	Soil	PLALVVVAAIGLAALLLQLRLRKDVNTGVRSPLWLNVLGLIFALGAVFADLFHLTPALMLVAALGAVICFAISSVTVLRAIRRKV
Ga0335078_104047022	3300032805	Soil	MIRRRFETLCVARYNLGRNPCRTAFSSPLALVVVAAIGLAALLLQLRSRRNLGSNVRAPLWLNVLGLVFAMSAVFVDFRHQAAKLMLALTLGAVGCFAISGIAVLRAMRRK
Ga0335080_102857532	3300032828	Soil	LLALALVVLYTTRNAFFSPLALVVVAAIGLAALLLQIRLHKDLRSRIRAPLWLNVLGLVFAITAVLADILHLKPNVMLVAALGAVACFAVSGVSVIHALRHRK
Ga0335080_103629701	3300032828	Soil	LLVVAAIGLAALLLQLRLRKDLTATVRAPLWLNVLGLLFAVAAVVIDLLHLSASVLTVAALGAVGSFAISGVKVIHSLRKNR
Ga0335070_100352863	3300032829	Soil	MSPLALVVVAAIGLAALLLQLRLRRDLGAPVHAPLWLNVTGLVFALAAVFPDVLHLGPTKMQVAALGAVVCFAISGTVVLHALRRKKIRGPQAE
Ga0335081_101620915	3300032892	Soil	LMALALVVLYTTRRAFLSPLALVVVAAIGLAALLLQLRLRKDVDSGVHAPLWVNVVGLIFALAAVCADFVHLGANFMVVAALGAVVCFSVSGVSVLRSLRKQKI
Ga0335081_110580081	3300032892	Soil	LLLALSLVVIYTGRKAFLSPLALVVVAAIGLAALLMQLRLRKDMDKSIHAPLWLNLLGLIFAIGAVIADFLHLSANLMMVAALAAVVCFAVSGANVLRSLRGKKNE
Ga0335072_112893532	3300032898	Soil	LVVLYTSRSAFLSPVALVVVAAIGLAALLLQLRLRHDIGGVRAPMWLNALGLVFAVVAIFADKLGLGGDGMQVASLGAVVCFAVSGTVVLHAMRKKRA
Ga0335083_108395411	3300032954	Soil	LYTGRGAFLSPLALVVVAAIGIAALLLQLRLRKDVSTSVHAPLWLNVLGLVFAIGAVSADFLHLSANVMMVAALGAVVCFAASGVAVIHALRKQGK
Ga0335084_115843861	3300033004	Soil	LAVVVLYTGKGAFLSPLALVVVAAIGLAALLLQLRLRRDTDKSVHAPLSLNVLGLIFAIGAVIADFLHLNANVMLVAALAGVICFAVSGVSVLRSLRKQKG
Ga0335073_100135781	3300033134	Soil	AALLLQIRLRKDLPNPVRAPIWLNAVGLICAIAAVFADHLHLSSALMLAASLGAVLCFGISGARILHNLRKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign