Metagenome / Metatranscriptome Family F071985

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071985
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	75 residues
Representative Sequence	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Number of Associated Samples	92
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	30.58 %
% of genes from short scaffolds (< 2000 bps)	72.73 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (64.463 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (24.793 % of family members)
Environment Ontology (ENVO)	Unclassified (70.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (67.769 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.63% β-sheet: 0.00% Coil/Unstructured: 47.37%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08281	Sigma70_r4_2	29.75
PF03150	CCP_MauG	6.61
PF01370	Epimerase	2.48
PF14240	YHYH	1.65
PF13561	adh_short_C2	0.83
PF11842	DUF3362	0.83
PF09334	tRNA-synt_1g	0.83
PF08497	Radical_SAM_N	0.83
PF04264	YceI	0.83
PF04542	Sigma70_r2	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	6.61
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.83
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.83
COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	General function prediction only [R]	0.83
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.83
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.83
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.83
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.46 %
Unclassified	root	N/A	35.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.46 %
Unclassified	root	N/A	35.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.46 %
Unclassified	root	N/A	35.54 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	38.84 %
Unclassified	root	N/A	35.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	19.01 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	19.01 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	14.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	14.88 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	7.44 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Fluviicola	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola	4.96 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	1.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
unclassified Fluviicola	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola	4.96 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.54 %
Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	4.96 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10018954	All Organisms → cellular organisms → Bacteria	2554	Open in IMG/M
3300000882\|FwDRAFT_10034084	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2382	Open in IMG/M
3300000929\|NpDRAFT_10034727	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1913	Open in IMG/M
3300002447\|JGI24768J34885_10024500	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300002835\|B570J40625_100079263	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4262	Open in IMG/M
3300003388\|JGI25910J50241_10073325	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300003388\|JGI25910J50241_10150744	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300003404\|JGI25920J50251_10022898	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1967	Open in IMG/M
3300003404\|JGI25920J50251_10052127	All Organisms → cellular organisms → Bacteria → FCB group	1076	Open in IMG/M
3300003404\|JGI25920J50251_10107117	Not Available	637	Open in IMG/M
3300003404\|JGI25920J50251_10150798	Not Available	505	Open in IMG/M
3300003411\|JGI25911J50253_10044040	Not Available	1559	Open in IMG/M
3300003411\|JGI25911J50253_10060338	All Organisms → cellular organisms → Bacteria → FCB group	1261	Open in IMG/M
3300003411\|JGI25911J50253_10107613	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300003412\|JGI25912J50252_10042544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1293	Open in IMG/M
3300003412\|JGI25912J50252_10043193	All Organisms → cellular organisms → Bacteria → FCB group	1279	Open in IMG/M
3300003429\|JGI25914J50564_10010820	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300003488\|JGI25919J51413_1019628	Not Available	529	Open in IMG/M
3300003497\|JGI25925J51416_10025002	All Organisms → cellular organisms → Bacteria → FCB group	1746	Open in IMG/M
3300003499\|JGI25930J51415_1003538	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300004764\|Ga0007754_1476807	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300004767\|Ga0007750_1536221	Not Available	680	Open in IMG/M
3300004836\|Ga0007759_11577458	Not Available	975	Open in IMG/M
3300005517\|Ga0070374_10312353	Not Available	797	Open in IMG/M
3300005517\|Ga0070374_10647201	Not Available	523	Open in IMG/M
3300005580\|Ga0049083_10113489	Not Available	935	Open in IMG/M
3300005580\|Ga0049083_10229009	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005580\|Ga0049083_10235270	Not Available	618	Open in IMG/M
3300005580\|Ga0049083_10255756	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005582\|Ga0049080_10187053	Not Available	687	Open in IMG/M
3300005583\|Ga0049085_10073544	Not Available	1200	Open in IMG/M
3300005583\|Ga0049085_10141883	Not Available	813	Open in IMG/M
3300005585\|Ga0049084_10144017	Not Available	834	Open in IMG/M
3300007544\|Ga0102861_1014386	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300007546\|Ga0102874_1188287	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300007562\|Ga0102915_1277854	Not Available	541	Open in IMG/M
3300007590\|Ga0102917_1153581	Not Available	808	Open in IMG/M
3300007618\|Ga0102896_1261957	Not Available	533	Open in IMG/M
3300007622\|Ga0102863_1048239	All Organisms → cellular organisms → Bacteria → FCB group	1240	Open in IMG/M
3300007622\|Ga0102863_1159240	Not Available	665	Open in IMG/M
3300007622\|Ga0102863_1223608	Not Available	553	Open in IMG/M
3300007622\|Ga0102863_1225779	Not Available	550	Open in IMG/M
3300007639\|Ga0102865_1008235	All Organisms → cellular organisms → Bacteria	2838	Open in IMG/M
3300007670\|Ga0102862_1011594	All Organisms → cellular organisms → Bacteria → FCB group	1960	Open in IMG/M
3300007864\|Ga0105749_1086034	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300007972\|Ga0105745_1176110	Not Available	665	Open in IMG/M
3300007972\|Ga0105745_1247119	Not Available	572	Open in IMG/M
3300007973\|Ga0105746_1356166	Not Available	511	Open in IMG/M
3300007974\|Ga0105747_1317650	Not Available	529	Open in IMG/M
3300007992\|Ga0105748_10391708	Not Available	599	Open in IMG/M
3300008996\|Ga0102831_1240149	Not Available	598	Open in IMG/M
3300009051\|Ga0102864_1012193	All Organisms → cellular organisms → Bacteria → FCB group	2190	Open in IMG/M
3300009068\|Ga0114973_10032767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3137	Open in IMG/M
3300009079\|Ga0102814_10205363	All Organisms → cellular organisms → Bacteria → FCB group	1074	Open in IMG/M
3300009152\|Ga0114980_10088181	All Organisms → cellular organisms → Bacteria → FCB group	1859	Open in IMG/M
3300009155\|Ga0114968_10014461	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5570	Open in IMG/M
3300009158\|Ga0114977_10460589	Not Available	700	Open in IMG/M
3300009183\|Ga0114974_10013981	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5769	Open in IMG/M
3300009185\|Ga0114971_10792596	Not Available	514	Open in IMG/M
3300010160\|Ga0114967_10046382	All Organisms → cellular organisms → Bacteria → FCB group	2775	Open in IMG/M
3300010885\|Ga0133913_10575519	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300010885\|Ga0133913_12233254	Not Available	1347	Open in IMG/M
3300013295\|Ga0170791_10097671	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300020141\|Ga0211732_1213714	Not Available	717	Open in IMG/M
3300020151\|Ga0211736_10279798	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	1283	Open in IMG/M
3300020159\|Ga0211734_10821580	All Organisms → cellular organisms → Bacteria	4811	Open in IMG/M
3300020161\|Ga0211726_10619228	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	8719	Open in IMG/M
3300020162\|Ga0211735_10656021	Not Available	1010	Open in IMG/M
3300020172\|Ga0211729_10106623	All Organisms → cellular organisms → Bacteria → FCB group	1512	Open in IMG/M
3300020172\|Ga0211729_10279545	Not Available	666	Open in IMG/M
3300020172\|Ga0211729_10774901	Not Available	637	Open in IMG/M
3300020205\|Ga0211731_10261495	Not Available	559	Open in IMG/M
3300020205\|Ga0211731_11181351	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300020205\|Ga0211731_11182581	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300020519\|Ga0208223_1001540	All Organisms → cellular organisms → Bacteria	4953	Open in IMG/M
3300020524\|Ga0208858_1000121	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	18303	Open in IMG/M
3300020528\|Ga0208224_1000561	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	6723	Open in IMG/M
3300023184\|Ga0214919_10003008	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	25943	Open in IMG/M
3300023184\|Ga0214919_10031317	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5538	Open in IMG/M
3300023184\|Ga0214919_10061857	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	3460	Open in IMG/M
3300023184\|Ga0214919_10472554	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300024343\|Ga0244777_10219195	All Organisms → cellular organisms → Bacteria → FCB group	1217	Open in IMG/M
3300024480\|Ga0255223_1013274	All Organisms → cellular organisms → Bacteria → FCB group	1296	Open in IMG/M
3300026567\|Ga0256303_1090901	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300027210\|Ga0208802_1003562	All Organisms → cellular organisms → Bacteria → FCB group	2123	Open in IMG/M
3300027211\|Ga0208307_1026488	All Organisms → cellular organisms → Bacteria → FCB group	925	Open in IMG/M
3300027214\|Ga0208306_1032352	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300027586\|Ga0208966_1116462	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027608\|Ga0208974_1178988	Not Available	523	Open in IMG/M
3300027621\|Ga0208951_1036498	All Organisms → cellular organisms → Bacteria → FCB group	1480	Open in IMG/M
3300027627\|Ga0208942_1009812	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3190	Open in IMG/M
3300027627\|Ga0208942_1027469	All Organisms → cellular organisms → Bacteria → FCB group	1820	Open in IMG/M
3300027679\|Ga0209769_1132294	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	796	Open in IMG/M
3300027688\|Ga0209553_1150232	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	794	Open in IMG/M
3300027707\|Ga0209443_1089201	All Organisms → cellular organisms → Bacteria → FCB group	1184	Open in IMG/M
3300027707\|Ga0209443_1146782	Not Available	861	Open in IMG/M
(restricted) 3300027728\|Ga0247836_1008324	All Organisms → cellular organisms → Bacteria	10557	Open in IMG/M
3300027744\|Ga0209355_1017885	All Organisms → cellular organisms → Bacteria	3661	Open in IMG/M
3300027746\|Ga0209597_1015014	All Organisms → cellular organisms → Bacteria	4358	Open in IMG/M
3300027772\|Ga0209768_10110112	Not Available	1341	Open in IMG/M
3300027785\|Ga0209246_10261848	All Organisms → cellular organisms → Bacteria → FCB group	669	Open in IMG/M
3300027797\|Ga0209107_10055888	All Organisms → cellular organisms → Bacteria → FCB group	2212	Open in IMG/M
3300027798\|Ga0209353_10230911	All Organisms → cellular organisms → Bacteria → FCB group	801	Open in IMG/M
3300027836\|Ga0209230_10294688	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	934	Open in IMG/M
3300027892\|Ga0209550_10513427	Not Available	717	Open in IMG/M
3300027892\|Ga0209550_10574826	Not Available	665	Open in IMG/M
3300027963\|Ga0209400_1057307	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1983	Open in IMG/M
3300028394\|Ga0304730_1001486	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	17621	Open in IMG/M
3300033992\|Ga0334992_0039922	All Organisms → cellular organisms → Bacteria → FCB group	2737	Open in IMG/M
3300034022\|Ga0335005_0093013	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1975	Open in IMG/M
3300034051\|Ga0335024_0507601	Not Available	587	Open in IMG/M
3300034060\|Ga0334983_0188638	Not Available	1285	Open in IMG/M
3300034071\|Ga0335028_0089300	All Organisms → cellular organisms → Bacteria → FCB group	2032	Open in IMG/M
3300034082\|Ga0335020_0089676	All Organisms → cellular organisms → Bacteria → FCB group	1576	Open in IMG/M
3300034095\|Ga0335022_0004711	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8351	Open in IMG/M
3300034095\|Ga0335022_0366625	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300034095\|Ga0335022_0405699	Not Available	735	Open in IMG/M
3300034103\|Ga0335030_0000890	All Organisms → cellular organisms → Bacteria	26207	Open in IMG/M
3300034168\|Ga0335061_0157182	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300034284\|Ga0335013_0204077	Not Available	1309	Open in IMG/M
3300034357\|Ga0335064_0037721	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Fluviicola → unclassified Fluviicola → Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24	2661	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.34%
Marine	Environmental → Aquatic → Marine	20.66%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	42.15%
Lake	Environmental → Aquatic → Freshwater → Lake	34.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.88%
Coastal	Environmental → Aquatic → Marine → Coastal	4.96%
River	Environmental → Aquatic → Freshwater → River	1.65%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.83%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	37.19%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	34.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	14.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.31%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.65%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.65%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.83%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	24.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.88%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.88%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	10.74%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.92%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.31%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.65%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.65%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.65%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.83%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300003404	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300003499	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN	Environmental	Open in IMG/M
3300004764	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004767	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004836	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020524	Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020528	Freshwater microbial communities from Lake Mendota, WI - 26OCT2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024480	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026567	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027210	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3 (SPAdes)	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027214	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02 (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027621	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF (SPAdes)	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027728 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14m	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100189541	3300000756	Freshwater And Sediment	MKELEDFKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKK
FwDRAFT_100340841	3300000882	Freshwater And Marine	KFSSRIEVSDELAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
NpDRAFT_100347272	3300000929	Freshwater And Marine	MKELEDFKFSSRIEVSDELAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
JGI24768J34885_100245001	3300002447	Freshwater And Sediment	MKELEDFKFSSRIEVSDELVNKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
B570J40625_1000792633	3300002835	Freshwater	MKELEDFTFSSRIEVSEELAKKLAMIPSQSQAPSIHFYYAAAAIALLISINLFAVLYSNQTKKINIENTEYFEEWN*
JGI25910J50241_100733252	3300003388	Freshwater Lake	MKELEDFTFSSRIEVSEELAKKLAMIPTQSQAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
JGI25910J50241_101507442	3300003388	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKIN
JGI25920J50251_100228984	3300003404	Freshwater Lake	NLLFNNMKELEDFKFSSRIEVSDELANKLALIPNXSXXPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
JGI25920J50251_100521271	3300003404	Freshwater Lake	MKELEIFKFSSRIEVSXELANKLVLIPNQSSAPIFHFYYAAAAIVLLISFNVFAVLYSNQTKKINIENTEYFEEWT*
JGI25920J50251_101071172	3300003404	Freshwater Lake	MKELEGFTFSSRIEVSDELANKLALIPTGKQAPITHFYYAAAAMTLLVSINIFAVLYANQTKETQNEATEYFEEWN*
JGI25920J50251_101507981	3300003404	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLALIPTGKQAPITRFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN*
JGI25911J50253_100440402	3300003411	Freshwater Lake	MKELEGFKFSSRIEVSDXLANKLALIPTGKQAPITHFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN*
JGI25911J50253_100603381	3300003411	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKIN
JGI25911J50253_101076132	3300003411	Freshwater Lake	MKELEDFKFSSRIEVSDELVNKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
JGI25912J50252_100425442	3300003412	Freshwater Lake	MKELENFNFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
JGI25912J50252_100431932	3300003412	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKIN
JGI25914J50564_100108204	3300003429	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLILINVFAVLYSNQTKKINIENTEYFEEWT*
JGI25919J51413_10196281	3300003488	Freshwater Lake	EVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNHSKKINIENTEYFEEWT*
JGI25925J51416_100250022	3300003497	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
JGI25930J51415_10035382	3300003499	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0007754_14768072	3300004764	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLALIPNQSSTPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0007750_15362212	3300004767	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLALIPNPSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0007759_115774581	3300004836	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0070374_103123532	3300005517	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0070374_106472012	3300005517	Freshwater Lake	MKELEIFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0049083_101134891	3300005580	Freshwater Lentic	NINLLFNNMKELEDFTFSSRIEVSDELSKKLAMIPTQSQAPSIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0049083_102290092	3300005580	Freshwater Lentic	MKELEIFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINIFAVLYSNQTKKINIENTEYFEEWT*
Ga0049083_102352702	3300005580	Freshwater Lentic	MKELEDFKFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0049083_102557561	3300005580	Freshwater Lentic	MKELEDFEFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEY
Ga0049080_101870532	3300005582	Freshwater Lentic	MKELEGFKFSSRIDVSDELANKLALIPTGKQAPITRIYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN*
Ga0049085_100735442	3300005583	Freshwater Lentic	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNHSKKINIENTEYFEEWT*
Ga0049085_101418832	3300005583	Freshwater Lentic	MKELEDFKFSSRIEVSDELAKKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0049084_101440172	3300005585	Freshwater Lentic	MKELEGFKFSSRIEVSDELANKLAVIPNQSLAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102861_10143863	3300007544	Estuarine	MKELEDFKFSSRIEVSDQLAKKLAMIPTQSQAPSIHFYYAAAAIALLITINVFAVLYSNQTKKINID
Ga0102874_11882872	3300007546	Estuarine	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKINIENTE
Ga0102915_12778542	3300007562	Estuarine	MKELEGFKFSSRIEVSDELANKLAVIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102917_11535813	3300007590	Estuarine	FKFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102896_12619571	3300007618	Estuarine	KELEDFKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102863_10482391	3300007622	Estuarine	VININLLFNNMKELEDFTFSSRIEVSDQLAKKLAMIPTQSQAPSIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0102863_11592401	3300007622	Estuarine	EDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102863_12236081	3300007622	Estuarine	SRIEVSEELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102863_12257791	3300007622	Estuarine	VININLLFNNMKELEDFTFSSRIEVSDQLAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0102865_10082352	3300007639	Estuarine	MKELEDFKFSSRIEVSDQLAKKLAMIPTQSQAPSIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0102862_10115942	3300007670	Estuarine	MKELENFNFSSRIEVSDELAKKLALIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0105749_10860342	3300007864	Estuary Water	MKELEDFKFSSRIEVSDELAKKLAMIPTQSQAPIIHFYYAAAAIALLISINVFAVLYSNQTKKIN
Ga0105745_11761101	3300007972	Estuary Water	MKELEDFKFSSRIEVSDQLAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0105745_12471192	3300007972	Estuary Water	MKELEGFKFSSRIDVSDELANKLALIPTGKQAPITRFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN*
Ga0105746_13561662	3300007973	Estuary Water	LEDFKFSSRIEVSDQLAKKLAMIPTQSRAPIIHFYYAAAAIALLISINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0105747_13176502	3300007974	Estuary Water	MKELEDFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN*
Ga0105748_103917081	3300007992	Estuary Water	NMKELEDFKFSSRIEVSDELAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0102831_12401491	3300008996	Estuarine	KNINLLFNNMKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102864_10121933	3300009051	Estuarine	MKELEDFKFSSRIEVSDQLAKKLAMIPTQSRAPIIHFYYAAAAIALLISINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0114973_100327675	3300009068	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0102814_102053632	3300009079	Estuarine	MKELEDFKFSSRIEVSEELANKLALIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTK
Ga0114980_100881812	3300009152	Freshwater Lake	MKELEDFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINIFAVLYSNQTKKINIENTEYFEEWT*
Ga0114968_100144616	3300009155	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0114977_104605892	3300009158	Freshwater Lake	FKFSSRIEVSEELAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0114974_100139816	3300009183	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLAVIPNQSLAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0114971_107925961	3300009185	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLSVIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0114967_100463822	3300010160	Freshwater Lake	MKELEIFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0133913_105755194	3300010885	Freshwater Lake	MKELEDFTFSSRIEVSDELAKKLAMIPTQSQAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN*
Ga0133913_122332542	3300010885	Freshwater Lake	MIELEEFKFSSRIEVSDELANKLALIPTGKQVPITRFYYAAAAIALLISINVFAVLYAKKSAETQKEDTEYFEEWT*
Ga0170791_100976712	3300013295	Freshwater	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHVYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT*
Ga0211732_12137142	3300020141	Freshwater	MKELEDFKFSSRIEVSDELAKKLALIPNQSSTPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211736_102797982	3300020151	Freshwater	MKELEGFKFSSRIEVSDELANKLALIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN
Ga0211734_108215808	3300020159	Freshwater	MKELKDFKFSSRIEVSDELANNLALIPTGKQAPITRFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211726_1061922811	3300020161	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211735_106560211	3300020162	Freshwater	NLLFNNMKELEGFKFSTRIEVSDELANKLALIPAGKQAPITRFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211729_101066231	3300020172	Freshwater	INLLFNNMKELEDFKFSSRIEVSDELANKLVLIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211729_102795452	3300020172	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTNKINIENTEYFEEWN
Ga0211729_107749011	3300020172	Freshwater	KELEGFKFSSRIEVSDELANKLALIPTERQASIARFYYAAAAIALLISINIFAVLYANQTKETQNEDTEYFEEWK
Ga0211731_102614952	3300020205	Freshwater	MKDLEGFKFSSRIEVSDELANKLALIPTERQVSFARFYYAAAAIALLISINIFAVLYANQTKETQNEDTEYFEEWN
Ga0211731_111813512	3300020205	Freshwater	MKELEDFKFSSRIEVSDELANKLVLIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0211731_111825812	3300020205	Freshwater	MKELEGFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEE
Ga0208223_10015405	3300020519	Freshwater	MKELEDFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINIFAVLYSNQTKKINIENTEYFEEWT
Ga0208858_10001216	3300020524	Freshwater	MKELEDFTFSSRIEVSEELAKKLAMIPSQSQAPSIHFYYAAAAIALLISINLFAVLYSNQTKKINIENTEYFEEWN
Ga0208224_10005615	3300020528	Freshwater	MKELEDFKFSSRIEVSDELANKLALISNQSRAPIMQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0214919_1000300820	3300023184	Freshwater	MKELEGFKFSSRIEVSEELAKKLAIIPTQSRAPITRFYYAAAAIALLISINVFAVLYAKKSAETQKEDTEYFEEWT
Ga0214919_100313174	3300023184	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLILINVFAVLYSNQTKKINIENTEYFEEWT
Ga0214919_100618574	3300023184	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYF
Ga0214919_104725542	3300023184	Freshwater	MKELEDFKFSSRIEVSDELAKKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYF
Ga0244777_102191952	3300024343	Estuarine	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0255223_10132742	3300024480	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPIQLSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0256303_10909011	3300026567	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPIQLSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEY
Ga0208802_10035623	3300027210	Estuarine	MKELEDFKFSSRIEVSDQLAKKLAMIPTQSQAPSIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN
Ga0208307_10264881	3300027211	Estuarine	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0208306_10323522	3300027214	Estuarine	MKELEDFKFSSRIEVSDELAKKLAMIPTQSRAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN
Ga0208966_11164622	3300027586	Freshwater Lentic	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0208974_11789882	3300027608	Freshwater Lentic	MKELENFNFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0208951_10364981	3300027621	Freshwater Lentic	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNHSKKINIENTEYFEEWT
Ga0208942_10098125	3300027627	Freshwater Lentic	MKELEIFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINIFAVLYSNQTKKINIENTEYFEEWT
Ga0208942_10274692	3300027627	Freshwater Lentic	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIKFYYAAAAIVLLISINVFAVLYSNHSKKINIENTEYFEEWT
Ga0209769_11322942	3300027679	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLALIPTGKQAPITRFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN
Ga0209553_11502322	3300027688	Freshwater Lake	MKELEGFTFSSRIEVSDELANKLALIPTGKQAPITHFYYAAAAMTLLVSINIFAVLYANQTKETQNEATEYFEEWN
Ga0209443_10892011	3300027707	Freshwater Lake	MKELEDFKFSSRIEVSDELVNKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEY
Ga0209443_11467822	3300027707	Freshwater Lake	FKFSSRIEVSDELANKLALIPIQSSTPIFHFYYAAAAIVLLILINVFAVLYSNQTKKINIENTEYFEEWT
(restricted) Ga0247836_10083243	3300027728	Freshwater	MIELEGFKFSSRIEVSDDLANKLALIPTGKQVPITRFYYAAAAIALLISINVFAVLYANKSAETQKEDTEYFEEWT
Ga0209355_10178854	3300027744	Freshwater Lake	MKELEDFTFSSRIEVSEELAKKLAMIPTQSQAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN
Ga0209597_10150142	3300027746	Freshwater Lake	MKELEDFKFSSRIEVSDELENKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0209768_101101122	3300027772	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLALIPTGKQAPITHFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN
Ga0209246_102618481	3300027785	Freshwater Lake	MKELEGFKFSSRIEVSDELANKLAVIPNQSRAPIFDFYYAAAAIVLLISINVFAVLYSNQTKK
Ga0209107_100558883	3300027797	Freshwater And Sediment	MKELEDFTFSSRIEVSDELANKLALIPNQSQAPIIHFYYAAAAIALLISINVFAVLYANQTKETQNEATEYFEEWN
Ga0209353_102309112	3300027798	Freshwater Lake	MKELEDFEFSSRIEVSDELANKLALIPNQSSTPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0209230_102946881	3300027836	Freshwater And Sediment	MKELEGFKFSSRIDVSDELANKLALIPTGKQAPITPFYYAAAAIALLVSINIFAVLYANQTKETQNEATEYFEEWN
Ga0209550_105134272	3300027892	Freshwater Lake	MKELEGFKFSSRIEVSEELAKKLELIPTGKQAPITRFYYAAAAMALLVSINIFAVLYSNQMKKINAETTEYFEEWN
Ga0209550_105748262	3300027892	Freshwater Lake	MKELEGFTFSSRIEVSDELANKLALIPTGKQAPITHFYYAAAAMTLLVSINIFAVLYANQTKETQ
Ga0209400_10573073	3300027963	Freshwater Lake	MKELEDFKFSSRIEVSDELANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWN
Ga0304730_10014866	3300028394	Freshwater Lake	MKELEIFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0334992_0039922_1708_1938	3300033992	Freshwater	MKELEIFKFSSRIEVSEELANKLALIPAGKQAPITRFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0335005_0093013_1655_1885	3300034022	Freshwater	MIELEDFTFSSRIEVSEELAKKLAMIPTQSQAPIIHFYYAAAAIALLISINIFAVLYSNQTKKINIENTEYFEEWN
Ga0335024_0507601_346_576	3300034051	Freshwater	MKELEGFTFSSRIEVSEELAKKLAMIPTQSQAPSIHFYYAAAAIALLISINVFAVLYSNQTKKINIENTEYFEEWN
Ga0334983_0188638_483_713	3300034060	Freshwater	MKELEGFKFSSRIEVSDELANKLALIPTGKQVPITRFYYAAAAIALLISINVFAVLYAKKSAETQKEDTEYFEEWT
Ga0335028_0089300_611_841	3300034071	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0335020_0089676_1057_1287	3300034082	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPTGKQVPITRFYYAAAAIALLISINVFAVLCAKKSAETQKEDTEYFEEWT
Ga0335022_0004711_190_420	3300034095	Freshwater	MIELEEFKFSSRIEVSDELANKLALIPTGKQVPITRFYYAAAAIALLISINVFAVLYAKKSAETQKEDTEYFEEWT
Ga0335022_0366625_462_692	3300034095	Freshwater	MKELEGFKFSSRIEVSDKLANKLAVIPNQSRAPIFHFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0335022_0405699_312_542	3300034095	Freshwater	MKELEDFTFSSRIEVSEELAKKLAMIPTQSRAPIIHFYYAAAAIALLISINVFAVLYSNQTKKINIENTEYFEEWN
Ga0335030_0000890_12044_12274	3300034103	Freshwater	MKELEDFKFSSRIEVSDELANKLALIPNQSRAPIIQFYYAAAAIVLLISINIFAVLYSNQTKKINIENKEYFEEWT
Ga0335061_0157182_453_683	3300034168	Freshwater	MKELEGFKFSSRIEVSDELANKLALIPAGKQAPITRFYYAAAAIVLLISINVFAVLYSNQTKKINIENTEYFEEWT
Ga0335013_0204077_288_518	3300034284	Freshwater	MKELEDFKFSSRIEVSEELAKKLALIPTQSQAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWT
Ga0335064_0037721_711_941	3300034357	Freshwater	MKELEDFTFSSRIEVSDELANKLALIPNQSQAPIIHFYYAAAAIALLITINVFAVLYSNQTKKINIENTEYFEEWN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters