Metagenome / Metatranscriptome Family F071983

Basic Information
Family ID	F071983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	61 residues
Representative Sequence	ARNENRLWALYIYLKSGGLAMTWTHTVIDIVRGRKEAYAYERELVKLFEPELNDQYL
Number of Associated Samples	101
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.65 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	84.30 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (49.587 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (26.446 % of family members)
Environment Ontology (ENVO)	Unclassified (62.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (78.512 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1JGI12421J11937_101393702 2JGI12421J11937_101450521 3B570J40625_1007292673 4JGI25908J49247_101010121 5JGI25908J49247_101363303 6JGI25907J50239_10657961 7JGI25911J50253_101049853 8JGI25911J50253_101900901 9JGI25914J50564_100046191 10JGI25919J51413_10033841 11JGI25924J51412_10501142 12Ga0063232_102484512 13Ga0065166_102191371 14Ga0066178_100120951 15Ga0068876_100390909 16Ga0068876_102635174 17Ga0078894_109020873 18Ga0078894_114999102 19Ga0078894_115484081 20Ga0102873_10774311 21Ga0102879_11941711 22Ga0102914_12693172 23Ga0102897_12200931 24Ga0108970_106980551 25Ga0114340_11453011 26Ga0114341_100165733 27Ga0114346_12198502 28Ga0114350_10542271 29Ga0114354_100024784 30Ga0114876_10570421 31Ga0114973_102688912 32Ga0114962_103992032 33Ga0114975_100972681 34Ga0114975_102636003 35Ga0114979_102305011 36Ga0114969_104190093 37Ga0114974_102012461 38Ga0114974_102243864 39Ga0114974_107327861 40Ga0114967_100640206 41Ga0136644_107702242 42Ga0129333_109192772 43Ga0129333_113857013 44Ga0129336_103691773 45Ga0114986_11026392 46Ga0133913_130870691 47Ga0138285_11058711 48Ga0164293_105018742 49Ga0181358_12180681 50Ga0181349_10413791 51Ga0181349_12714571 52Ga0181359_10353616 53Ga0207193_13688881 54Ga0194110_102866361 55Ga0211732_11878393 56Ga0211732_12360621 57Ga0211733_104912671 58Ga0194134_102051553 59Ga0194134_103181581 60Ga0194118_101414346 61Ga0194124_104494763 62Ga0211731_116849811 63Ga0194127_106950203 64Ga0194125_101426218 65Ga0208852_10324741 66Ga0194123_104552523 67Ga0214163_10367975 68Ga0210307_12477943 69Ga0194117_103682101 70Ga0194117_104033233 71Ga0222714_102469945 72Ga0255148_10381741 73Ga0244777_107169911 74Ga0255171_10004381 75Ga0256312_10289704 76Ga0255267_11447891 77Ga0255102_10587713 78Ga0255113_10289295 79Ga0255112_100722410 80Ga0255111_10112946 81Ga0255111_10710131 82Ga0208442_10490681 83Ga0208172_10601132 84Ga0208805_10800972 85Ga0208027_10532321 86Ga0255124_100177217 87Ga0255140_100681610 88Ga0255146_11130102 89Ga0255125_10703581 90Ga0208966_10425543 91Ga0255117_10925771 92Ga0208974_10199457 93Ga0208974_11136501 94Ga0209356_10001101 95Ga0209356_10772813 96Ga0209769_12551751 97Ga0209553_11973611 98Ga0209551_11136391 99Ga0209551_12753481 100Ga0209188_10357776 101Ga0209617_103043422 102Ga0209442_10106221 103Ga0209442_11587031 104Ga0209770_101819031 105Ga0209768_100426521 106Ga0209500_103804072 107Ga0209107_104672941 108Ga0209354_1000110538 109Ga0209550_101661561 110Ga0209191_10569675 111Ga0256335_10158835 112Ga0304730_11526562 113Ga0315901_104074394 114Ga0315901_111702513 115Ga0315906_1002418018 116Ga0315903_104502514 117Ga0335020_0539837_333_548 118Ga0335012_0051865_2195_2368 119Ga0335033_0210131_805_1023 120Ga0335058_0107473_1458_1631 121Ga0335048_0360271_511_666
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86 1JGI12421J11937_101393702 2JGI12421J11937_101450521 3JGI25908J49247_101010121 4JGI25908J49247_101363303 5JGI25907J50239_10657961 6JGI25911J50253_101049853 7Ga0066178_100120951 8Ga0068876_102635174 9Ga0102873_10774311 10Ga0102879_11941711 11Ga0114340_11453011 12Ga0114346_12198502 13Ga0114354_100024784 14Ga0114969_104190093 15Ga0114974_102012461 16Ga0129336_103691773 17Ga0114986_11026392 18Ga0133913_130870691 19Ga0138285_11058711 20Ga0194134_102051553 21Ga0194134_103181581 22Ga0214163_10367975 23Ga0255148_10381741 24Ga0244777_107169911 25Ga0255111_10112946 26Ga0255146_11130102 27Ga0209188_10357776 28Ga0315901_111702513 29Ga0335058_0107473_1458_1631
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1Ga0209551_12753481 2JGI25911J50253_101049853 3JGI25919J51413_10033841 4Ga0068876_102635174 5Ga0102914_12693172 6Ga0102897_12200931 7Ga0114340_11453011 8Ga0114350_10542271 9Ga0114876_10570421 10Ga0114962_103992032 11Ga0114975_102636003 12Ga0114974_102243864 13Ga0114974_107327861 14Ga0136644_107702242 15Ga0129333_109192772 16Ga0129333_113857013 17Ga0129336_103691773 18Ga0114986_11026392 19Ga0138285_11058711 20Ga0181358_12180681 21Ga0211733_104912671 22Ga0194118_101414346 23Ga0211731_116849811 24Ga0210307_12477943 25Ga0194117_103682101 26Ga0255148_10381741 27Ga0255267_11447891 28Ga0255111_10710131 29Ga0209188_10357776 30Ga0209770_101819031 31Ga0315901_111702513 32Ga0335058_0107473_1458_1631
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.47% β-sheet: 0.00% Coil/Unstructured: 63.53%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF08722	Tn7_TnsA-like_N	0.83
PF16363	GDP_Man_Dehyd	0.83
PF00004	AAA	0.83
PF04434	SWIM	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.83
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.83
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.41 %
Unclassified	root	N/A	49.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.79 %
Unclassified	root	N/A	49.59 %
Viruses	superkingdom	All Organisms → Viruses	44.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	17.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.48 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	17.36 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.31 %
Unclassified	root	N/A	49.59 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.31 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	17.36 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.48 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.31 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	16.53 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.31 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.53 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium septentrionale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	0.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.48 %
unclassified Flavobacteriales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales	2.48 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.53 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium septentrionale	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium septentrionale	0.83 %
Bradyrhizobium sp. CCGB20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCGB20	2.48 %
Flavobacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium	2.48 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.27 %
Unclassified	root	N/A	49.59 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16.53 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10139370	Not Available	611	Open in IMG/M
3300000756\|JGI12421J11937_10145052	Not Available	593	Open in IMG/M
3300002835\|B570J40625_100729267	Not Available	882	Open in IMG/M
3300003277\|JGI25908J49247_10101012	Not Available	695	Open in IMG/M
3300003277\|JGI25908J49247_10136330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300003394\|JGI25907J50239_1065796	Not Available	722	Open in IMG/M
3300003411\|JGI25911J50253_10104985	Not Available	857	Open in IMG/M
3300003411\|JGI25911J50253_10190090	Not Available	571	Open in IMG/M
3300003429\|JGI25914J50564_10004619	All Organisms → Viruses → Predicted Viral	4613	Open in IMG/M
3300003488\|JGI25919J51413_1003384	All Organisms → Viruses → Predicted Viral	1272	Open in IMG/M

Showing 1 to 10 of 121 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.35%
Plants	Host-Associated → Plants	0.83%
Terrestrial	Environmental → Terrestrial	0.83%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.83%
Freshwater	Environmental → Aquatic → Freshwater	86.78%
Leaf	Host-Associated → Plants → Leaf	0.83%
Marine	Environmental → Aquatic → Marine	11.57%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	2.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.26%
Lake	Environmental → Aquatic → Freshwater → Lake	36.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.71%
River	Environmental → Aquatic → Freshwater → River	12.40%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.31%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.26%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.54%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.93%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	12.40%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.83%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.26%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.83%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	12.40%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.48%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.48%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.83%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	26.45%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.05%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.09%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.83%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.48%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.48%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.13%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003488	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300004054	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M

Showing 1 to 10 of 101 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_101393702	3300000756	Freshwater And Sediment	NRLWALYVYLKTGGLDMTWEHKVIAVVRGRAEAYDFERGLVKQLQPTLNDQYM*
JGI12421J11937_101450521	3300000756	Freshwater And Sediment	VNENRLWALYIYLKSGGLAMNWTHEIIAVVRGRKEAYAYERELVKLFEPELNDQYL*
B570J40625_1007292673	3300002835	Freshwater	NENRLWALYIYLKSGGLAMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL*
JGI25908J49247_101010121	3300003277	Freshwater Lake	RKHISRARNENRAWVLYEYLKMGAMDWAWEHRVLAIIRGRKEAYAYERALVKEQVPSLNDQYL*
JGI25908J49247_101363303	3300003277	Freshwater Lake	ALYVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKMAEPTLNDQYL*
JGI25907J50239_10657961	3300003394	Freshwater Lake	RKGSVTVAKAVKERWRKHXSXARNENRLWAXYVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYM*
JGI25911J50253_101049853	3300003411	Freshwater Lake	WRKHKSRARNENRTWALYVYLKTGGLDLGWTHNIIAIVRGRAEAYAYERELVKRAEPTLNDQYL*
JGI25911J50253_101900901	3300003411	Freshwater Lake	AKNENRLWALYIYLKSGGLAMNWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL*
JGI25914J50564_100046191	3300003429	Freshwater Lake	LYIYLKSGGLAMNWTHEIIAVVRGRKEAYAYERELVKLFEPELNDQYL*
JGI25919J51413_10033841	3300003488	Freshwater Lake	HISRARNENRAWVLYEYLKMGAMDWAWEHRVLAIIRGRKEAYAYERALVKEQVPSLNDQYL*
JGI25924J51412_10501142	3300003491	Freshwater Lake	YVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYM*
Ga0063232_102484512	3300004054	Freshwater Lake	VLERWRKHKSRARNENRKWALYVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKMAEPTLNDQYL*
Ga0065166_102191371	3300004112	Freshwater Lake	NENRMWALYVYLKTGGLDMTWTHTVLDVIRGRKEAYAYERELVKMIEPELNDQYL*
Ga0066178_100120951	3300004124	Freshwater Lake	NEDRKWALYVYLKTGGLDLGWTHKIITIIRGRAEAYAYERELVKQVVPELNDQYL*
Ga0068876_100390909	3300005527	Freshwater Lake	ERWRKHKSRAVNENRLWALYIYLKSGGLAMTWKHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL*
Ga0068876_102635174	3300005527	Freshwater Lake	PTKAVRERWRKHISRAKNENRTWALYVYLKTGGLTMTWSHRILEIVRGRAEAYARERELVKTVRPELNDQYL*
Ga0078894_109020873	3300005662	Freshwater Lake	NENRMWALYVYLKTGGLDMTWTHTVLDVIRGRKEAYAYERELVKMMEPELNDQYL*
Ga0078894_114999102	3300005662	Freshwater Lake	WALYIYLKSGGLAMNWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL*
Ga0078894_115484081	3300005662	Freshwater Lake	LYIYLKSGGLAMTWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL*
Ga0102873_10774311	3300007545	Estuarine	VTRAVAERWRKHVSRAKNENRLWALYVYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL*
Ga0102879_11941711	3300007549	Estuarine	RWRKHKSRARNENRLWALYIYLKSGGLDLAWHHRVIAVIRGRKEAFEYERHLVK*
Ga0102914_12693172	3300007561	Estuarine	LERWRKHKSRARNENRTWALYVYLKTGGLDLGWTHTILAIVRGRAEAYAYERSLVKELGPTLNDQYTG*
Ga0102897_12200931	3300007617	Estuarine	NENRLWALYVYLKTGGMDMGWEHRVIAVIRGRAEAYDFERGLVKALEPTLNDQYL*
Ga0108970_106980551	3300008055	Estuary	NRLWALYIYLKSGGLAMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL*
Ga0114340_11453011	3300008107	Freshwater, Plankton	VLYQYLKAGALDFHWEHRVLEIVRGRKAAYAREREIVKIQKPTLNDQYL*
Ga0114341_100165733	3300008108	Freshwater, Plankton	MTKHKSRAKNENRLWALYIYLKSGGLAMNWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL*
Ga0114346_12198502	3300008113	Freshwater, Plankton	SRARNENRLWALYIYLKTGGLDLAWTHRVITVIRGRAEAYAWEREYVKKHKPTLNDQYL*
Ga0114350_10542271	3300008116	Freshwater, Plankton	PNVDKVVAERWRKHKRRARNEHRLWALYIYLKTGGLDLAWTHRVITVIRGRAEAYAWEREYVKKHKPTLNDQYL*
Ga0114354_100024784	3300008119	Freshwater, Plankton	VTPVKAVLERWRKHKSRARNEDRKWALYVYLKTGGLDLGWTHKIITIIRGRAEAYAYERELVKQVVPELNDQYL*
Ga0114876_10570421	3300008448	Freshwater Lake	ADKVVAERWRKHRSRAVNENRLWALYIYLKSGGLDMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL*
Ga0114973_102688912	3300009068	Freshwater Lake	GLTRKGSVTVAKAVKERWRKHISRARNENRLWALYVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYM*
Ga0114962_103992032	3300009151	Freshwater Lake	VTVAKAVKERWRKHISRARNENRLWALYVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYIG*
Ga0114975_100972681	3300009164	Freshwater Lake	SRARNENRLWALYIYLKSGGLDMMWEHRVITVIRGRAEAYAYERSLVKELGPSLNDQYTG
Ga0114975_102636003	3300009164	Freshwater Lake	RARNEDRKWALYVYLKSGGLDLGWTHTILAIVRGRAEAYAYERELVKSARPQLNDQYL*
Ga0114979_102305011	3300009180	Freshwater Lake	KSRARNENRMWALYVYLKTGGLDMTWTHTVLDVIRGRKEAYAYERELVKMIEPELNDQYL
Ga0114969_104190093	3300009181	Freshwater Lake	ARNENRLWALYIYLKSGGLDMTWEHTVIDIIRGRKEAYATERIIVKAVEPELNDQYL*
Ga0114974_102012461	3300009183	Freshwater Lake	KAVKERWRKHISRARNENRLWALYIYLKSGGLDMAWEHRVITVIRGRAEAYAYERSLVKELGPTLNDQYQ*
Ga0114974_102243864	3300009183	Freshwater Lake	SRARNENRLWALYIYLKSGGLDLAWHHRVIAVIRGRKEAYEYERHLVKEFQPTLNDQYL*
Ga0114974_107327861	3300009183	Freshwater Lake	ERWRKHKSRAVNENRLWALYICLKSGGLAMNWTHEIIAVIRGRKEAYAYERELVKLIKPELNDQYL*
Ga0114967_100640206	3300010160	Freshwater Lake	YVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELKPTLNDQYIG*
Ga0136644_107702242	3300010334	Freshwater Lake	KHLSRARNENRLWALYIYLKSGGLDMAWEHRVITVIRGRAEAYAYERSLVKELGPSLNDQYQ*
Ga0129333_109192772	3300010354	Freshwater To Marine Saline Gradient	NENRLWALYVYLKSGGLDLSWTHRVITVIRGRAEAYAWEREYVKAHQPALNDQYL*
Ga0129333_113857013	3300010354	Freshwater To Marine Saline Gradient	YVYLKTGGLEQTWEHRVLEIVRGRKAAYAREREIVKELAPSLNDQYL*
Ga0129336_103691773	3300010370	Freshwater To Marine Saline Gradient	LSRARNEHRAWRLYEYMRAGGLEQTWEHRVLAIIRGRAEAYAWERAVVKEQQPTLNDQYL
Ga0114986_11026392	3300010374	Deep Subsurface	YQYLKDRLDGTWTHRVLAVVRGRADAYAYERALVKKMEPTLNDQYM*
Ga0133913_130870691	3300010885	Freshwater Lake	ALYIYLKSGGLDLAWHHRVIAVIRGRKEAYEYERHLVKEFRPTLNDQYL*
Ga0138285_11058711	3300012758	Freshwater Lake	KSRARNEDRAWPLYQYLRDRLDGDWSHRVITIIRGRAEAYDYERSLVKTLQPTLNDQYIG
Ga0164293_105018742	3300013004	Freshwater	YIYLKSGGLAMTWTHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL*
Ga0181358_12180681	3300017774	Freshwater Lake	RKHKSRARNEDRKWALYVYLNTGGLTMSWTHRIIEIVRGRAEAYAREREIVKTVRPQLNDQYL
Ga0181349_10413791	3300017778	Freshwater Lake	KSRARNENRKWALYVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKMAEPTLNDQYL
Ga0181349_12714571	3300017778	Freshwater Lake	LERWRKHKSRARNEDRKWALYVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKRAEPTLNDQYL
Ga0181359_10353616	3300019784	Freshwater Lake	NVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYM
Ga0207193_13688881	3300020048	Freshwater Lake Sediment	KWALYVYLKTGGLDLGWTHKIITIIRGRAEAYAYERELVKQAEPILNDQYL
Ga0194110_102866361	3300020084	Freshwater Lake	RLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0211732_11878393	3300020141	Freshwater	ADKVVAERWRKHKSRAKNENRLWALYIYLKSGGLDMTWTHTVIDIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0211732_12360621	3300020141	Freshwater	KVVAERWRKHKSRAVNENRLWALYIYLKSGGLAMNWTHEIIAVIRGRKEAYAYERELVKLFEPELNDQYR
Ga0211733_104912671	3300020160	Freshwater	KGSVTVEKAVLERWRKHKSRARNENRMWALYVYLKTGGLDMTWTHTVLDVIRGRKEAYAYERELVKMIEPELNDQYL
Ga0194134_102051553	3300020179	Freshwater Lake	ENKVVAERWRKHKSRARNENRLWALYVYLKTGGLELNWTHRIIAVIRGRAEAYAWEREYVKKHQPTLNDQYL
Ga0194134_103181581	3300020179	Freshwater Lake	WALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWERQYVKQHRPSLNDQYL
Ga0194118_101414346	3300020190	Freshwater Lake	ERWRKHKSRARCENRLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0194124_104494763	3300020196	Freshwater Lake	LERWRKHRSRARCEHRLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0211731_116849811	3300020205	Freshwater	TETKAVLERWRKHKSRARNENRMWALYIYLKSGGLDMAWTHTVIDVIRGRKEAYAYERELVKIMEPELNDQYL
Ga0194127_106950203	3300020221	Freshwater Lake	RKHRSRARCEHRLWALYVYLKTGGLELNWTHRVIAVIRGRRAAYAWEREYVKQHQPTLNDQYL
Ga0194125_101426218	3300020222	Freshwater Lake	RARCEHRLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0208852_10324741	3300020560	Freshwater	WALYVYLKTGGLDMTWTHTVIDVIRGRKEAYAYERELVKMIEPELNDQYL
Ga0194123_104552523	3300021093	Freshwater Lake	SRARCEHRLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0214163_10367975	3300021141	Freshwater	LKTGGLDMTWTHTVIDVIRGRKEAYAYERELVKMIEPELNDQYM
Ga0210307_12477943	3300021336	Estuarine	VAKAVKERWRKHISRARNENRLWALYIYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL
Ga0194117_103682101	3300021424	Freshwater Lake	KKHKSRARCEHRLWALYVYLKTGGLDLAWTHRIIAVIRGRRAAYAWEREYVKQHQPTLNDQYL
Ga0194117_104033233	3300021424	Freshwater Lake	ARCENRLWALYVYLKTGGLELNWTHRVIAVIRGRAEAYAWEREYVKQHRPSLNDQYL
Ga0222714_102469945	3300021961	Estuarine Water	KSRAVNENRLWALYIYLKSGGLAMNWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255148_10381741	3300024306	Freshwater	STVNKSVLERWRKHKSRARNENRLWALYVYLKTGGLDLAWEHRVLEIVRGRREAYAREREIVKALAPSLNDQYL
Ga0244777_107169911	3300024343	Estuarine	IYLKSGGLDMTWEHKVITVIRGRAEAYAYERSLVKELGPSLNDQYTG
Ga0255171_10004381	3300024354	Freshwater	ENRLWALYVYLKTGGLDMTWEHKIIAVIRGRAEAYDFERGLVKELRPSLNDQYL
Ga0256312_10289704	3300024861	Freshwater	NRLWALYIYLKSGGLAMTWKHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255267_11447891	3300024867	Freshwater	ENYIGLTRKGSTTVNRAVKERWRKHLSRARNENRLWALYVYLKTGGLDMTWEHKIIAVIRGRAEAYDFERGLVKELRPSLNDQYL
Ga0255102_10587713	3300027144	Freshwater	LYVYLKTGGLDLGWTHNIIAIVRGRAEAYAYERELVKMAEPTLNDQYL
Ga0255113_10289295	3300027147	Freshwater	LWALYIYLKSGGLAMNWTHEIIAVVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255112_100722410	3300027150	Freshwater	LYIYLKSGGLAMNWTHEIIAVVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255111_10112946	3300027154	Freshwater	DKVVAERWRKHKSRAVNENRLWALYIYLKSGGLAMTWKHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255111_10710131	3300027154	Freshwater	KAVLERWRKHKSRARNEDRKWALYVYLKTGGLELGWTHKIITIIRGRAEAYAYERELVKQVVPELNDQYL
Ga0208442_10490681	3300027229	Estuarine	RAVAERWRKHVSRAKNENRLWALYVYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL
Ga0208172_10601132	3300027231	Estuarine	KGDVTVAKAVKERWRKHISRARNENRLWALYIYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL
Ga0208805_10800972	3300027241	Estuarine	VSRAKNENRLWALYVYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL
Ga0208027_10532321	3300027260	Estuarine	QWALYVYLKSGGLDMTWTHTVIDVIRGRAEAYATERIIVKAVEPELNDQYL
Ga0255124_100177217	3300027299	Freshwater	LYIYLKSGGLAMTWKHEIIAIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0255140_100681610	3300027300	Freshwater	LYIYLKSGGLDMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL
Ga0255146_11130102	3300027396	Freshwater	YVYLKTGGLDLAWEHRVLEIVRGRREAYAREREIVKALAPSLNDQYL
Ga0255125_10703581	3300027534	Freshwater	RKHRSRAVNENRLWALYIYLKSGGLDMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL
Ga0208966_10425543	3300027586	Freshwater Lentic	TVAKAVKERWRKHISRARNENRLWALYVYLKTGGLDMTWEHKVIAVVRGRAEAYDFERGLVKELQPTLNDQYM
Ga0255117_10925771	3300027600	Freshwater	HKSRAKNENRLWALYIYLKSGGLAMNWTHEIIAIVRGRKEAYAYERELVKLFEPELNDQY
Ga0208974_10199457	3300027608	Freshwater Lentic	VVKERWRKHISRARNENRAWVLYEYLKMGAMDWAWEHRVLAIIRGRKEAYAYERALVKEQVPSLNDQYL
Ga0208974_11136501	3300027608	Freshwater Lentic	ERWRKHRSRAVNENRLWALYIYLKSGGLAMTWQHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL
Ga0209356_10001101	3300027644	Freshwater Lake	ERWRKHRSRAVNENRLWALYIYLKSGGLAMTWRHEVIAVIRGRAEAYALERELVKLFEPELNDQYL
Ga0209356_10772813	3300027644	Freshwater Lake	VLERWRKHKSRARNENRKWALYVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKRAEPTLNDQYL
Ga0209769_12551751	3300027679	Freshwater Lake	WALYIYLKSGGLAMTWSHEVIAVIRGRKEAYAYERELVKLFEPELNDQYR
Ga0209553_11973611	3300027688	Freshwater Lake	YVYLKTGGLDLGWTHNILAIVRGRAEAYAYERELVKMAEPTLNDQYL
Ga0209551_11136391	3300027689	Freshwater Lake	NRLWALYIYLKSGGLAMTWRHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL
Ga0209551_12753481	3300027689	Freshwater Lake	ARNENRLWALYIYLKSGGLAMTWTHTVIDIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0209188_10357776	3300027708	Freshwater Lake	SRARNEQREWVLYEYLRALGLALAWEHKIICIIRGRKEAYAYERELVKARQPTLNDQYCG
Ga0209617_103043422	3300027720	Freshwater And Sediment	VTPVKAVLERWRKHKSRARNENRKWALYVYLNTGGLTMSWTHRIIEIVRGRAEAYAREREIVKAARPQLNDQYL
Ga0209442_10106221	3300027732	Freshwater Lake	VLERWRKHKSRARNEDRKWALYVYLKTGGLDLGWTHKIITVIRGRAEAYAYERELVKQVVPELNDQYL
Ga0209442_11587031	3300027732	Freshwater Lake	WRKHKSRARNENRLWALYIYLKSGGLAMTWTHTVIDIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0209770_101819031	3300027769	Freshwater Lake	VAERWRKHKSRAVNENRMWNLYVYLKSGGLAMNWTHEIIAIVRGRAEAYAYERELVKLFEPELNDQYL
Ga0209768_100426521	3300027772	Freshwater Lake	TRKGSVTVAKAVKERWRKHISRARNENRLWALYVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELQPTLNDQYM
Ga0209500_103804072	3300027782	Freshwater Lake	WALYIYLKSGGLDMMWEHKVITVIRGRAEAYAYERSLVKELGPTLNDQYQ
Ga0209107_104672941	3300027797	Freshwater And Sediment	VNENRLWALYIYLKSGGLAMTWQHEVIAVIRGRKEAYAYERELVKLFEPELNDQYL
Ga0209354_1000110538	3300027808	Freshwater Lake	KAVLERWRKHKSRARNEDRKWALYVYLKTGGLDLGWTHKIITVIRGRAEAYAYERELVKQVVPELNDQYL
Ga0209550_101661561	3300027892	Freshwater Lake	KGSVTVNKAVLERWRKHKSRARNENRMWALYVYLKTGGLDMTWTHTVIDVIRGRKEAYAYERELVKMIEPELNDQYL
Ga0209191_10569675	3300027969	Freshwater Lake	RWRKHVSRARNENRLWALYIYLKSGGLDMMWEHRVITVIRGRAEAYAYERSLVKELGPSLNDQYTG
Ga0256335_10158835	3300028112	Freshwater	AVKERWRKHLSRARNENRLWALYVYLKTGGLDMTWEHKIIAVIRGRAEAYDFERGLVKELRPSLNDQYL
Ga0304730_11526562	3300028394	Freshwater Lake	NENRLWALYVYLKTGGLDMTWEHRVIAIVRGRAEAYDFERGLVKELKPTLNDQYIG
Ga0315901_104074394	3300031963	Freshwater	PAKAVRERWRKHISRAKNENRTWALYVYLKTGGLTMTWTHRILEIVRGRAEAYARERELVKTVRPELNDQYL
Ga0315901_111702513	3300031963	Freshwater	RWALYVYLKTGGLTMQWSHRILEVVRGRAEAYARERELVKAVQPQLNDQYL
Ga0315906_1002418018	3300032050	Freshwater	KGTVTPVKAVLERWRKHKSRARNEDRKWALYVYLKTGGLDLGWTHKIITIIRGRAEAYAYERELVKQVVPELNDQYL
Ga0315903_104502514	3300032116	Freshwater	NRTWALYVYLKTGGLTMTWTHRILEIVRGRAEAYARERELVKTVRPELNDQYL
Ga0335020_0539837_333_548	3300034082	Freshwater	DKVVAERWRKHKSRAKNENRLWALYIYLKSGGLDMTWTHTVIDIVRGRKEAYAYERELVKLFEPELNDQYL
Ga0335012_0051865_2195_2368	3300034093	Freshwater	ARNENRLWALYIYLKSGGLDLAWHHRVIAVIRGRKEAYEYERHLVKEFRPTLNDQYL
Ga0335033_0210131_805_1023	3300034117	Freshwater	VTKVVAERWRKHKSRARNENRLWALYIYLKTGGLELAWEHRVLAIIRGRKEAYEYERSLVKELAPTLNDQYL
Ga0335058_0107473_1458_1631	3300034121	Freshwater	ARNENRLWALYIYLKTGGLELAWEHRVLAIIRGRKEAYEYERSLVKELAPTLNDQYL
Ga0335048_0360271_511_666	3300034356	Freshwater	MWALYVYLKTGGLDMTWTHTVLDVIRGRKEAYAYERELVKMIEPELNDQYL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences