Metagenome / Metatranscriptome Family F071980

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071980
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	58 residues
Representative Sequence	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Number of Associated Samples	90
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	52.89 %
% of genes from short scaffolds (< 2000 bps)	80.17 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (44.628 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (17.355 % of family members)
Environment Ontology (ENVO)	Unclassified (40.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (46.281 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 90.00% β-sheet: 0.00% Coil/Unstructured: 10.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF13620	CarboxypepD_reg	28.10
PF01521	Fe-S_biosyn	10.74
PF14902	DUF4494	9.09
PF01467	CTP_transf_like	4.96
PF00118	Cpn60_TCP1	3.31
PF01592	NifU_N	3.31
PF12838	Fer4_7	3.31
PF07883	Cupin_2	2.48
PF08544	GHMP_kinases_C	2.48
PF13715	CarbopepD_reg_2	1.65
PF01471	PG_binding_1	1.65
PF01041	DegT_DnrJ_EryC1	1.65
PF13580	SIS_2	0.83
PF00037	Fer4	0.83
PF01380	SIS	0.83
PF02195	ParBc	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	10.74
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	10.74
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	3.31
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	3.31
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.65
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.65
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.65
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.65
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.65
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.37 %
Unclassified	root	N/A	44.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	44.63 %
Unclassified	root	N/A	44.63 %
Viruses	superkingdom	All Organisms → Viruses	10.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.88 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	10.74 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	10.74 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.44 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.44 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	4.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.44 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.83 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.83 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.83 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.83 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Paludibacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae	0.83 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.83 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Paludibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter	0.83 %
unclassified Cyclobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae	0.83 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Paludibacter propionicigenes	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes	0.83 %
Cyclobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	0.83 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.63 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	10.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7.44 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.31 %
Paludibacter propionicigenes WB4	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	0.83 %
Cyclobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	0.83 %
Parcubacteria group bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2200036682	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300001847\|RCM41_1037740	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300001848\|RCM47_1024440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1275	Open in IMG/M
3300001848\|RCM47_1073705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1168	Open in IMG/M
3300001849\|RCM26_1128318	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	998	Open in IMG/M
3300001851\|RCM31_10104021	All Organisms → cellular organisms → Bacteria	2281	Open in IMG/M
3300002835\|B570J40625_100019911	Not Available	11391	Open in IMG/M
3300002835\|B570J40625_100938147	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300003277\|JGI25908J49247_10024499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium	1767	Open in IMG/M
3300004112\|Ga0065166_10291294	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300004240\|Ga0007787_10634374	Not Available	535	Open in IMG/M
3300004461\|Ga0066223_1370706	All Organisms → Viruses → Predicted Viral	1117	Open in IMG/M
3300005582\|Ga0049080_10067210	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300005585\|Ga0049084_10023617	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2433	Open in IMG/M
3300007546\|Ga0102874_1052743	Not Available	1311	Open in IMG/M
3300007549\|Ga0102879_1167221	Not Available	669	Open in IMG/M
3300007555\|Ga0102817_1030280	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300007555\|Ga0102817_1037169	Not Available	1070	Open in IMG/M
3300007555\|Ga0102817_1142298	Not Available	535	Open in IMG/M
3300007562\|Ga0102915_1171628	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	706	Open in IMG/M
3300007606\|Ga0102923_1075662	Not Available	1059	Open in IMG/M
3300007621\|Ga0102872_1186529	Not Available	547	Open in IMG/M
3300007624\|Ga0102878_1224072	Not Available	535	Open in IMG/M
3300007639\|Ga0102865_1122255	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300007653\|Ga0102868_1174976	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	519	Open in IMG/M
3300007661\|Ga0102866_1138054	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	615	Open in IMG/M
3300007670\|Ga0102862_1079655	Not Available	811	Open in IMG/M
3300007955\|Ga0105740_1101141	Not Available	510	Open in IMG/M
3300007973\|Ga0105746_1097102	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300008055\|Ga0108970_11748185	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300008107\|Ga0114340_1059493	Not Available	1644	Open in IMG/M
3300008111\|Ga0114344_1219369	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	582	Open in IMG/M
3300008116\|Ga0114350_1060018	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300008117\|Ga0114351_1093943	All Organisms → Viruses → Predicted Viral	1763	Open in IMG/M
3300009050\|Ga0102909_1075387	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	827	Open in IMG/M
3300009052\|Ga0102886_1092988	Not Available	921	Open in IMG/M
3300009059\|Ga0102830_1007778	All Organisms → cellular organisms → Bacteria	3547	Open in IMG/M
3300009059\|Ga0102830_1046280	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300009079\|Ga0102814_10476359	Not Available	680	Open in IMG/M
3300009086\|Ga0102812_10567078	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	622	Open in IMG/M
3300009155\|Ga0114968_10316239	Not Available	869	Open in IMG/M
3300009159\|Ga0114978_10105015	Not Available	1861	Open in IMG/M
3300009160\|Ga0114981_10154072	Not Available	1267	Open in IMG/M
3300009163\|Ga0114970_10014229	Not Available	5497	Open in IMG/M
3300009180\|Ga0114979_10874793	Not Available	501	Open in IMG/M
3300009183\|Ga0114974_10135948	Not Available	1549	Open in IMG/M
3300009225\|Ga0103851_1012812	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1209	Open in IMG/M
3300009230\|Ga0103855_10053960	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	739	Open in IMG/M
3300009233\|Ga0103856_10067352	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	653	Open in IMG/M
3300009419\|Ga0114982_1001283	Not Available	12425	Open in IMG/M
3300009419\|Ga0114982_1133376	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300010160\|Ga0114967_10048383	Not Available	2702	Open in IMG/M
3300010160\|Ga0114967_10244455	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	943	Open in IMG/M
3300010354\|Ga0129333_10325953	Not Available	1370	Open in IMG/M
3300010354\|Ga0129333_10758086	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300010354\|Ga0129333_11221846	Not Available	623	Open in IMG/M
3300010885\|Ga0133913_10559489	All Organisms → Viruses → Predicted Viral	3007	Open in IMG/M
3300010885\|Ga0133913_11016627	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300012012\|Ga0153799_1033281	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300013372\|Ga0177922_11323598	Not Available	1480	Open in IMG/M
3300020141\|Ga0211732_1400740	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	682	Open in IMG/M
3300020160\|Ga0211733_10312842	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	544	Open in IMG/M
3300020160\|Ga0211733_10548403	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300020205\|Ga0211731_10542133	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	876	Open in IMG/M
3300020519\|Ga0208223_1026926	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Paludibacteraceae → Paludibacter → Paludibacter propionicigenes → Paludibacter propionicigenes WB4	755	Open in IMG/M
3300020562\|Ga0208597_1032661	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1086	Open in IMG/M
3300021961\|Ga0222714_10006870	Not Available	10538	Open in IMG/M
3300021961\|Ga0222714_10121845	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300021961\|Ga0222714_10192120	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1186	Open in IMG/M
3300021961\|Ga0222714_10283224	Not Available	916	Open in IMG/M
3300021962\|Ga0222713_10145930	All Organisms → Viruses → Predicted Viral	1638	Open in IMG/M
3300021962\|Ga0222713_10149878	Not Available	1610	Open in IMG/M
3300021962\|Ga0222713_10285821	Not Available	1058	Open in IMG/M
3300021962\|Ga0222713_10390496	Not Available	859	Open in IMG/M
3300021962\|Ga0222713_10424637	Not Available	812	Open in IMG/M
3300021962\|Ga0222713_10518182	Not Available	710	Open in IMG/M
3300021963\|Ga0222712_10201789	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1301	Open in IMG/M
3300021963\|Ga0222712_10348028	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300021963\|Ga0222712_10562256	Not Available	664	Open in IMG/M
3300022407\|Ga0181351_1059749	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300022407\|Ga0181351_1074634	Not Available	1365	Open in IMG/M
3300023179\|Ga0214923_10253761	Not Available	989	Open in IMG/M
3300023184\|Ga0214919_10026965	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6141	Open in IMG/M
3300023184\|Ga0214919_10208926	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300024346\|Ga0244775_10167370	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300024346\|Ga0244775_10314528	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1297	Open in IMG/M
3300024346\|Ga0244775_11147470	Not Available	607	Open in IMG/M
3300027320\|Ga0208923_1000446	Not Available	9017	Open in IMG/M
3300027418\|Ga0208022_1007103	All Organisms → cellular organisms → Bacteria	2758	Open in IMG/M
3300027508\|Ga0255072_1017390	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300027529\|Ga0255077_1114577	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300027649\|Ga0208960_1085824	Not Available	884	Open in IMG/M
3300027710\|Ga0209599_10092935	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300027754\|Ga0209596_1081501	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300027770\|Ga0209086_10012713	Not Available	5580	Open in IMG/M
3300027770\|Ga0209086_10236995	Not Available	815	Open in IMG/M
3300027772\|Ga0209768_10339074	Not Available	619	Open in IMG/M
3300027798\|Ga0209353_10004937	Not Available	6818	Open in IMG/M
3300027798\|Ga0209353_10234095	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300027892\|Ga0209550_10533858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → unclassified Cyclobacteriaceae → Cyclobacteriaceae bacterium	699	Open in IMG/M
3300027973\|Ga0209298_10039442	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300027973\|Ga0209298_10253952	Not Available	699	Open in IMG/M
3300027973\|Ga0209298_10266347	Not Available	678	Open in IMG/M
3300027974\|Ga0209299_1195176	Not Available	743	Open in IMG/M
3300028025\|Ga0247723_1011340	Not Available	3418	Open in IMG/M
3300028103\|Ga0255172_1060492	Not Available	689	Open in IMG/M
3300028394\|Ga0304730_1132439	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1029	Open in IMG/M
3300031758\|Ga0315907_10085903	All Organisms → cellular organisms → Bacteria	2710	Open in IMG/M
3300031787\|Ga0315900_10476765	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	955	Open in IMG/M
3300031951\|Ga0315904_10759347	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300032093\|Ga0315902_11331848	Not Available	503	Open in IMG/M
3300032116\|Ga0315903_10125380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2402	Open in IMG/M
3300034018\|Ga0334985_0622101	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300034061\|Ga0334987_0113486	Not Available	2056	Open in IMG/M
3300034062\|Ga0334995_0085651	Not Available	2435	Open in IMG/M
3300034101\|Ga0335027_0302415	Not Available	1080	Open in IMG/M
3300034104\|Ga0335031_0414152	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300034104\|Ga0335031_0860146	Not Available	501	Open in IMG/M
3300034105\|Ga0335035_0069718	Not Available	2295	Open in IMG/M
3300034283\|Ga0335007_0659552	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.17%
Host-Associated	Host-Associated	0.83%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.87%
Terrestrial	Environmental → Terrestrial	3.31%
Plants	Host-Associated → Plants	0.83%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	60.33%
Marine	Environmental → Aquatic → Marine	35.54%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.31%
Leaf	Host-Associated → Plants → Leaf	0.83%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.23%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.36%
Lentic	Environmental → Aquatic → Freshwater → Lentic	14.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	7.44%
Coastal	Environmental → Aquatic → Marine → Coastal	4.96%
Lotic	Environmental → Aquatic → Freshwater → Lotic	4.13%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.31%
River	Environmental → Aquatic → Freshwater → River	2.48%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.23%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	17.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.22%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.92%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	7.44%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.13%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	4.13%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.31%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	17.36%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.88%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	10.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.09%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.44%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.13%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	4.13%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.31%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.48%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	2.48%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	2.48%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.48%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.48%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.48%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	1.65%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.83%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.83%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300001847	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM41. ROCA_DNA251_0.2um_TAP-D_2a	Environmental	Open in IMG/M
3300001848	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM47, ROCA_DNA265_0.2um_TAP-S_3a	Environmental	Open in IMG/M
3300001849	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM26, ROCA_DNA190_2.0um_MCP-N_C_2b	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300009050	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009225	Microbial communities of water from Amazon river, Brazil - RCM4	Environmental	Open in IMG/M
3300009230	Microbial communities of water from Amazon river, Brazil - RCM8	Environmental	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020519	Freshwater microbial communities from Lake Mendota, WI - 07OCT2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027529	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepC_8h	Environmental	Open in IMG/M
3300027649	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027772	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027974	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028103	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8d	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200249142	2199352005	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
RCM41_10377403	3300001847	Marine Plankton	MDSKKEAIFQQMKTLWEQFAVEHGKTTKVSQKNARGLINDFKKLVTEYRAASVEESK*
RCM47_10244401	3300001848	Marine Plankton	MASKKEEIFQQLKGLWETFEAEHNKTTKVSQKNARTXXXXXXXKKLVTDYRAASVEETKQK*
RCM47_10737053	3300001848	Marine Plankton	MDSKKQAIFQQMKTLWEQFAVEHGKTTKVSQKNARGLINDLKKLVTEYRAASVEESK*
RCM26_11283182	3300001849	Marine Plankton	MSKKQDLFDAMKKLWESFEAEHNKTTKVSQKNXXXXXXXXXXXXXEYRAASVEETKA*
RCM31_101040213	3300001851	Marine Plankton	MESKKEAIFEQMKTLWEQFAVEHGKTTKVSQKNARGLINDLKKLVTEYRAASVEESK*
B570J40625_10001991115	3300002835	Freshwater	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
B570J40625_1009381472	3300002835	Freshwater	MASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
JGI25908J49247_100244992	3300003277	Freshwater Lake	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKNSN
Ga0065166_102912941	3300004112	Freshwater Lake	MKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ*
Ga0007787_106343742	3300004240	Freshwater Lake	YLVNKQKTAIMASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN*
Ga0066223_13707064	3300004461	Marine	IMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0049080_100672101	3300005582	Freshwater Lentic	KTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ*
Ga0049084_100236171	3300005585	Freshwater Lentic	KTAIMASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKNSN*
Ga0102874_10527434	3300007546	Estuarine	MASKQEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKNSN
Ga0102879_11672212	3300007549	Estuarine	MASKKEELFQTMKQLFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0102817_10302801	3300007555	Estuarine	SKKDELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ*
Ga0102817_10371691	3300007555	Estuarine	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQA
Ga0102817_11422981	3300007555	Estuarine	FFLYLINKQKTAIMASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN*
Ga0102915_11716283	3300007562	Estuarine	MASKKEELFQTMKQLFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKNSN
Ga0102923_10756624	3300007606	Estuarine	MASKKQEIFETMKALFVKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0102872_11865291	3300007621	Estuarine	MASKKQEIFETMKSLFVKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKTSN
Ga0102878_12240722	3300007624	Estuarine	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSN
Ga0102865_11222551	3300007639	Estuarine	FQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ*
Ga0102868_11749761	3300007653	Estuarine	MASKKQEIFETMKSLFAKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0102866_11380543	3300007661	Estuarine	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
Ga0102862_10796551	3300007670	Estuarine	MASKKEELFQTMKQLFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKSSN
Ga0105740_11011411	3300007955	Estuary Water	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKSSN
Ga0105746_10971022	3300007973	Estuary Water	TNKKTAIMASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ*
Ga0108970_117481852	3300008055	Estuary	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNNQ
Ga0114340_10594935	3300008107	Freshwater, Plankton	MASKKDELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASV
Ga0114344_12193693	3300008111	Freshwater, Plankton	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKIVTDY
Ga0114350_10600185	3300008116	Freshwater, Plankton	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYR
Ga0114351_10939431	3300008117	Freshwater, Plankton	YLVNKQKTAIMASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN*
Ga0102909_10753872	3300009050	Estuarine	KELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ*
Ga0102886_10929881	3300009052	Estuarine	QMTKLWVVFVDEHNKTTKVSQKNARTAIGDLKKLVTEYRSASVEETKN*
Ga0102830_10077781	3300009059	Estuarine	KEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0102830_10462802	3300009059	Estuarine	MASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSN
Ga0102814_104763592	3300009079	Estuarine	MASKKEELFQTMKQLFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0102812_105670782	3300009086	Estuarine	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETISSN
Ga0114968_103162391	3300009155	Freshwater Lake	SKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0114978_101050152	3300009159	Freshwater Lake	ETIKELFTKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSGD*
Ga0114981_101540721	3300009160	Freshwater Lake	EIFETIKELFTKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSGD*
Ga0114970_100142299	3300009163	Freshwater Lake	MASKKQEIFETIKELFTKVEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSGD
Ga0114979_108747931	3300009180	Freshwater Lake	AIMASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0114974_101359481	3300009183	Freshwater Lake	TMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0103851_10128122	3300009225	River Water	MEESRKEAIFEQMKTLWEQFTVEHSKTTKVSQKNARGLINDLKKLVTEYRAASVEESK*
Ga0103855_100539602	3300009230	River Water	TLFQDMKSLWEKFEVEHNKTTKVSQKNARGLINDLKKLVTEYRAASVEESK*
Ga0103856_100673522	3300009233	River Water	QQMKTLWEQFAVEHGKTTKVSQKNARGLINDLKKLVTEYRAASVEESK*
Ga0114982_100128314	3300009419	Deep Subsurface	MASKKQEIFETMKALFVKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKTAK
Ga0114982_11333761	3300009419	Deep Subsurface	MKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ*
Ga0114967_100483831	3300010160	Freshwater Lake	AIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN*
Ga0114967_102444554	3300010160	Freshwater Lake	METKKEALFVQMKDLWVKFEEEHVKTTKVSQKNARTLIGDLKKLVTEYRAASV
Ga0129333_103259531	3300010354	Freshwater To Marine Saline Gradient	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNNQ
Ga0129333_107580862	3300010354	Freshwater To Marine Saline Gradient	LFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN*
Ga0129333_112218462	3300010354	Freshwater To Marine Saline Gradient	QTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN*
Ga0133913_105594891	3300010885	Freshwater Lake	SKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ*
Ga0133913_110166272	3300010885	Freshwater Lake	FQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ*
Ga0153799_10332812	3300012012	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN
Ga0177922_113235982	3300013372	Freshwater	FQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN*
Ga0211732_14007402	3300020141	Freshwater	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0211733_103128422	3300020160	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYR
Ga0211733_105484032	3300020160	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSN
Ga0211731_105421332	3300020205	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKMVTDYRQASVEETKNSQ
Ga0208223_10269262	3300020519	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0208597_10326611	3300020562	Freshwater	MASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQA
Ga0222714_1000687013	3300021961	Estuarine Water	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0222714_101218453	3300021961	Estuarine Water	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
Ga0222714_101921202	3300021961	Estuarine Water	MASKKEELFQTMKQLWEQFEVEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0222714_102832241	3300021961	Estuarine Water	MASKKEELFQTMKQLWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0222713_101459302	3300021962	Estuarine Water	KEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
Ga0222713_101498782	3300021962	Estuarine Water	MASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0222713_102858211	3300021962	Estuarine Water	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0222713_103904963	3300021962	Estuarine Water	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQAS
Ga0222713_104246373	3300021962	Estuarine Water	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETK
Ga0222713_105181821	3300021962	Estuarine Water	MASKKEELFQTMKQLFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
Ga0222712_102017894	3300021963	Estuarine Water	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVED
Ga0222712_103480282	3300021963	Estuarine Water	MKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN
Ga0222712_105622562	3300021963	Estuarine Water	QKTAIMASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0181351_10597491	3300022407	Freshwater Lake	TIMASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKNSN
Ga0181351_10746344	3300022407	Freshwater Lake	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0214923_102537612	3300023179	Freshwater	MASKKEQLFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0214919_100269652	3300023184	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0214919_102089265	3300023184	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0244775_101673701	3300024346	Estuarine	EELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
Ga0244775_103145281	3300024346	Estuarine	MASKKDELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
Ga0244775_111474701	3300024346	Estuarine	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0208923_100044613	3300027320	Estuarine	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN
Ga0208022_10071031	3300027418	Estuarine	QKTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0255072_10173902	3300027508	Freshwater	IKTAIMASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0255077_11145772	3300027529	Freshwater	MKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQ
Ga0208960_10858242	3300027649	Freshwater Lentic	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEDTKSSN
Ga0209599_100929351	3300027710	Deep Subsurface	MKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
Ga0209596_10815011	3300027754	Freshwater Lake	ELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKSSN
Ga0209086_100127131	3300027770	Freshwater Lake	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKSSN
Ga0209086_102369952	3300027770	Freshwater Lake	QKTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0209768_103390743	3300027772	Freshwater Lake	ITKKTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0209353_100049373	3300027798	Freshwater Lake	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEDTKNSN
Ga0209353_102340952	3300027798	Freshwater Lake	YQKSFVYLFNNKKTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
Ga0209550_105338583	3300027892	Freshwater Lake	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKS
Ga0209298_100394424	3300027973	Freshwater Lake	MASKKQEIFETIKELFTKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSGD
Ga0209298_102539521	3300027973	Freshwater Lake	TAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0209298_102663471	3300027973	Freshwater Lake	KTAIMASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSN
Ga0209299_11951762	3300027974	Freshwater Lake	TAIMAKKQEIFEAMKSLFAKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSGD
Ga0247723_10113402	3300028025	Deep Subsurface Sediment	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSQ
Ga0255172_10604922	3300028103	Freshwater	MASKKDEIFQTMKALWEKFEVENAKSTKVSQKNARTLIGNLKKLVTEYRLASVEETKNSN
Ga0304730_11324393	3300028394	Freshwater Lake	METKKEALFVQMKDLWVKFEEEHVKTTKVSQKNARTLIGDLKKLVTEYRA
Ga0315907_100859035	3300031758	Freshwater	MASKKQEIFETIKALFVKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKISN
Ga0315907_103462451	3300031758	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDY
Ga0315900_104767652	3300031787	Freshwater	MASKKEQLFQTMKELWEQFEVEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0315904_107593472	3300031951	Freshwater	MASKKEQLFQTMKQLWEQFEVEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0315902_113318482	3300032093	Freshwater	KELWNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKNSN
Ga0315903_101253801	3300032116	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVED
Ga0334985_0622101_449_598	3300034018	Freshwater	MKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKSSQ
Ga0334987_0113486_2_157	3300034061	Freshwater	MASKKQEIFETMKSLFVKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQAS
Ga0334995_0085651_2262_2435	3300034062	Freshwater	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEETKN
Ga0335027_0302415_3_170	3300034101	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEET
Ga0335031_0414152_538_765	3300034104	Freshwater	MASKKEELFQTMKELWNKFEEEHNKTTKVSQKNARTAIGDLKKVVTDYRQASVEETKNSQKTQRGGTNRLHPFIF
Ga0335031_0860146_128_310	3300034104	Freshwater	MASKKQEIFETMKALFVKFEEEHNKTTKVSQKNARTAIGDLKKLITDYRQASVEETKSVK
Ga0335035_0069718_2139_2294	3300034105	Freshwater	MASKKEELFQTMKELFNKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQAS
Ga0335007_0659552_424_591	3300034283	Freshwater	MASKKEELFQTMKELFSKFEEEHNKTTKVSQKNARTLIGDLKKVVTDYRQASVEET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071980

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences