NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F071907

Metagenome / Metatranscriptome Family F071907

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F071907
Family Type Metagenome / Metatranscriptome
Number of Sequences 121
Average Sequence Length 64 residues
Representative Sequence PEVPVTVTVAAPVVAVAEAVRVSVEVALPFAGGVTGLVENAAVTPLGRPVALKVVAELKL
Number of Associated Samples 108
Number of Associated Scaffolds 121

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 44.04 %
% of genes near scaffold ends (potentially truncated) 53.72 %
% of genes from short scaffolds (< 2000 bps) 84.30 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (56.198 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(12.397 % of family members)
Environment Ontology (ENVO) Unclassified
(30.579 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.240 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 3.41%    β-sheet: 17.05%    Coil/Unstructured: 79.55%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 121 Family Scaffolds
PF12867DinB_2 2.48
PF00857Isochorismatase 1.65
PF03861ANTAR 0.83
PF12697Abhydrolase_6 0.83
PF13432TPR_16 0.83
PF01855POR_N 0.83
PF00266Aminotran_5 0.83
PF02789Peptidase_M17_N 0.83

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 121 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 1.65
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.65
COG0260Leucyl aminopeptidaseAmino acid transport and metabolism [E] 0.83
COG0674Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 0.83
COG3707Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domainsTranscription [K] 0.83
COG4231TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 0.83


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A56.20 %
All OrganismsrootAll Organisms43.80 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_101023532Not Available711Open in IMG/M
3300002664|Ga0005488J37274_112072Not Available539Open in IMG/M
3300003218|JGI26339J46600_10149136All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300003551|Ga0005498J51100_111297Not Available563Open in IMG/M
3300004080|Ga0062385_10133178Not Available1259Open in IMG/M
3300004080|Ga0062385_10774087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300004082|Ga0062384_101291629Not Available534Open in IMG/M
3300004152|Ga0062386_100786740Not Available783Open in IMG/M
3300005332|Ga0066388_101204278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1295Open in IMG/M
3300005436|Ga0070713_101375965All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium684Open in IMG/M
3300005602|Ga0070762_10632620Not Available713Open in IMG/M
3300005610|Ga0070763_10661380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300006059|Ga0075017_101415900Not Available547Open in IMG/M
3300006102|Ga0075015_100194453All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1077Open in IMG/M
3300006162|Ga0075030_101472637All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300009098|Ga0105245_12711885Not Available548Open in IMG/M
3300009632|Ga0116102_1116821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi755Open in IMG/M
3300009645|Ga0116106_1159853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi720Open in IMG/M
3300009824|Ga0116219_10500238Not Available672Open in IMG/M
3300010159|Ga0099796_10575981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300010341|Ga0074045_10382058All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300010343|Ga0074044_10131711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1677Open in IMG/M
3300010362|Ga0126377_10261181All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium1691Open in IMG/M
3300010867|Ga0126347_1113619Not Available505Open in IMG/M
3300010877|Ga0126356_10873954Not Available590Open in IMG/M
3300011075|Ga0138555_1160044Not Available916Open in IMG/M
3300011077|Ga0138572_1037108All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300011120|Ga0150983_12209027Not Available1250Open in IMG/M
3300011120|Ga0150983_13724613Not Available658Open in IMG/M
3300011120|Ga0150983_13814784All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2232Open in IMG/M
3300011120|Ga0150983_14529561Not Available501Open in IMG/M
3300011120|Ga0150983_16709267All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium717Open in IMG/M
3300011269|Ga0137392_10174972Not Available1745Open in IMG/M
3300011271|Ga0137393_10421660All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1143Open in IMG/M
3300012189|Ga0137388_10019354All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5078Open in IMG/M
3300012200|Ga0137382_10659895Not Available749Open in IMG/M
3300012205|Ga0137362_11509217All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300012212|Ga0150985_109922122All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300012362|Ga0137361_11553473All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300012363|Ga0137390_11678641Not Available570Open in IMG/M
3300014165|Ga0181523_10708495Not Available550Open in IMG/M
3300014200|Ga0181526_10173808All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1380Open in IMG/M
3300014638|Ga0181536_10272453Not Available799Open in IMG/M
3300014657|Ga0181522_10261276Not Available1024Open in IMG/M
3300014657|Ga0181522_10461185Not Available763Open in IMG/M
3300014657|Ga0181522_10895867Not Available547Open in IMG/M
3300015193|Ga0167668_1034662All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium1102Open in IMG/M
3300015242|Ga0137412_10393373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1074Open in IMG/M
3300015245|Ga0137409_10633842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium900Open in IMG/M
3300017933|Ga0187801_10319609Not Available634Open in IMG/M
3300017948|Ga0187847_10001253All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae23591Open in IMG/M
3300017972|Ga0187781_10231722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1305Open in IMG/M
3300017974|Ga0187777_11477881Not Available503Open in IMG/M
3300018038|Ga0187855_10139024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1453Open in IMG/M
3300018040|Ga0187862_10465908Not Available765Open in IMG/M
3300018086|Ga0187769_10049669All Organisms → cellular organisms → Bacteria → Acidobacteria2910Open in IMG/M
3300019258|Ga0181504_1120880Not Available565Open in IMG/M
3300019278|Ga0187800_1472745Not Available645Open in IMG/M
3300020579|Ga0210407_11026295Not Available628Open in IMG/M
3300020581|Ga0210399_10901495All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium717Open in IMG/M
3300021180|Ga0210396_10995276All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300021401|Ga0210393_10594957Not Available903Open in IMG/M
3300021404|Ga0210389_10075755All Organisms → cellular organisms → Bacteria2581Open in IMG/M
3300021406|Ga0210386_11239235Not Available630Open in IMG/M
3300021475|Ga0210392_10927386All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300021478|Ga0210402_11937304Not Available515Open in IMG/M
3300021559|Ga0210409_10348447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1331Open in IMG/M
3300021858|Ga0213852_1167721Not Available627Open in IMG/M
3300022527|Ga0242664_1116103Not Available564Open in IMG/M
3300022709|Ga0222756_1059035Not Available590Open in IMG/M
3300022716|Ga0242673_1091549Not Available576Open in IMG/M
3300022721|Ga0242666_1087833Not Available705Open in IMG/M
3300023250|Ga0224544_1008178Not Available1413Open in IMG/M
3300026879|Ga0207763_1018969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300027110|Ga0208488_1067542Not Available595Open in IMG/M
3300027660|Ga0209736_1142365All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300027698|Ga0209446_1127242All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300027825|Ga0209039_10351211Not Available572Open in IMG/M
3300027853|Ga0209274_10068234All Organisms → cellular organisms → Bacteria1715Open in IMG/M
3300027867|Ga0209167_10000534All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae26720Open in IMG/M
3300027889|Ga0209380_10166724Not Available1290Open in IMG/M
3300027895|Ga0209624_10598519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium731Open in IMG/M
3300027903|Ga0209488_11101296All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300028762|Ga0302202_10398945All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium639Open in IMG/M
3300028776|Ga0302303_10059369Not Available1470Open in IMG/M
3300029908|Ga0311341_10811444Not Available517Open in IMG/M
3300029943|Ga0311340_10673089Not Available891Open in IMG/M
3300029951|Ga0311371_11267813Not Available844Open in IMG/M
3300030617|Ga0311356_11127965Not Available725Open in IMG/M
3300030618|Ga0311354_10717058Not Available955Open in IMG/M
3300030706|Ga0310039_10305871Not Available601Open in IMG/M
3300030707|Ga0310038_10329083All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium681Open in IMG/M
3300030741|Ga0265459_13030649Not Available586Open in IMG/M
3300030743|Ga0265461_11003000Not Available826Open in IMG/M
3300031090|Ga0265760_10368675Not Available516Open in IMG/M
3300031239|Ga0265328_10057486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1428Open in IMG/M
3300031708|Ga0310686_100418825All Organisms → cellular organisms → Bacteria3224Open in IMG/M
3300031708|Ga0310686_118619206All Organisms → cellular organisms → Bacteria → Acidobacteria1275Open in IMG/M
3300031715|Ga0307476_10615536All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae805Open in IMG/M
3300031753|Ga0307477_10677233All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium691Open in IMG/M
3300031754|Ga0307475_10780514All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium759Open in IMG/M
3300031823|Ga0307478_10968169Not Available711Open in IMG/M
3300031871|Ga0316036_113219Not Available576Open in IMG/M
3300032174|Ga0307470_10536017All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium862Open in IMG/M
3300032174|Ga0307470_10583955All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium832Open in IMG/M
3300032180|Ga0307471_100754124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1139Open in IMG/M
3300032180|Ga0307471_102122724Not Available707Open in IMG/M
3300032180|Ga0307471_102452697Not Available659Open in IMG/M
3300034125|Ga0370484_0114504All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.40%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil9.09%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil9.09%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil6.61%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog6.61%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.13%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.13%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.31%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.31%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.48%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.65%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.65%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.65%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.65%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.65%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.65%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.83%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.83%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.83%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.83%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.83%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.83%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002664Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF137 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300003551Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011075Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011077Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014638Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300015197Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022527Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022709Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023250Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14EnvironmentalOpen in IMG/M
3300026879Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)EnvironmentalOpen in IMG/M
3300027110Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028776Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031871Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10102353213300002245Forest SoilVVEPEVPVIVTVAVPTVALEEAVSVRVEVALPFAGGVTGLVENVAVTPLGKPDALRVVA
Ga0005488J37274_11207213300002664Forest SoilVIVTVAVPTVAPAEAVSVRVELALPFAGGVTGLVENVAVTPEGNPDALSVVAESN
JGI26339J46600_1014913623300003218Bog Forest SoilMVVLWLSEPEAPVTVTVEVPRVAPSEAVSVRIEVTLPFAGGVTGLAENVAVTPLGRPVALSVVAELKLFWLVM
Ga0005498J51100_11129713300003551Forest SoilVIVTVAVPTVALEEAVSVRVEVALPFAGGVTGLVENLAVTPEGRPDALNVVAELK
Ga0062385_1013317813300004080Bog Forest SoilEVPVIVTVAAPTVAVEEAVKVSVEVALPFAAGVTGLVENAAVTPLGKPVALSVVAALKLL
Ga0062385_1077408723300004080Bog Forest SoilMVVLWLSEPEVPVTVTVAVPMVALPEAVSVRFEVVLPFAAGVTGFFENFAVTPLGTPVALSVVAELKLLWLVMVMV
Ga0062384_10129162913300004082Bog Forest SoilVPTVALAEAVSVRVELALPFAGGVTGLVENVAVTPEGRPDALSVVAELKPPVL
Ga0062389_10148123823300004092Bog Forest SoilTVTVPVAAVADAVNVSVEVTLPLAGGVTGFGENPAVTPLGKPVAVSVVAELKLF*
Ga0062386_10078674023300004152Bog Forest SoilVSEPEVPVIVTVAAPTVALAEAVSVSVEVALPFAAGVTGLVEKVAVTPLGRPVALSVVADEKLF*
Ga0066388_10120427843300005332Tropical Forest SoilDEFTVREIVVLCVSDPDVPVTVIVAAPVVAVAEAVSVSVELTLPLAGGVTGLLENDAVTPVGNPEALSVVAELKLF*
Ga0070713_10137596513300005436Corn, Switchgrass And Miscanthus RhizosphereVAVPVVAVEDAVSVRMEVALPLAGGVTGLVENAAVMPVGNPVALRVVAEVKLF*
Ga0070762_1063262013300005602SoilVVDPEVPVIVTVAAPTVALAEAVSVSVEVALPFAGGVTGLVENAAVTPEGRPEALNVVA
Ga0070763_1066138013300005610SoilVPWLSEPEVPVTVTVAVPTVALAAAVSVRVEVALLFAGGVTGLGENAAVTPLGKPLAVSEVAELNPF*
Ga0075017_10141590013300006059WatershedsPVDELTVRAIVVEWVSVPEVPVRVTVAVPTVADAEAVKVRVEVALPLAGGVTGLVEKAAVTPVGSPFVLRVVAELKLF*
Ga0075015_10019445313300006102WatershedsLTVSAIVVECVSVPEVPVTVTVAVPTLADAEAVNVRVEVALPLAGGVTGLVEKAAVTPAGKPFAVRVVAELKLF*
Ga0075030_10147263713300006162WatershedsLTVRAMVVEWVREPEVPVTVTVAVPTVADGEAVKVSVEVVLPLAGGVMGLVEKPAVTPAGKPVALSVVAEL*
Ga0105245_1271188513300009098Miscanthus RhizosphereMVIVAAPVVAVAEAVSVSVELALPLAGGVTGLVEKAAVTPLGRPVALSVVAELKLF*
Ga0116102_111682113300009632PeatlandMVVLWLSEPEVPVTVTVAVPVVALLEAVSVRVEVALPFAAGVTGFFENAAVTPLGRP
Ga0116106_115985313300009645PeatlandMVVLWLSEPEVPVTVTVAVPVVALLEAVSVRVEVALPFAAGVTGFFENAAVTPLGRPVAPSVVAELKL
Ga0116101_104098923300009759PeatlandMVVVPVAAEAEAVSVRVEFTLPFAGGVTGLGENPAVTPLGRPEALSVVAELKLF*
Ga0116219_1050023823300009824Peatlands SoilCAPPDGFTVSVMFVLWLSEPEVPVTVTVAVPVAAVAEAVSVRVEFTLPFAGGVTGLGENPAVTPLGKLEALSVVAELKLF*
Ga0126384_1189855013300010046Tropical Forest SoilVRLPEIPEMVSENVPVLAVEDAARVRVEDALPPAGGVTLTGANVAVTPLGKPEMFRLV
Ga0099796_1057598123300010159Vadose Zone SoilVDEFTVKAIFVLWVSDPEVPVTVTVAGPVVAVAEAVRVSVEVALPFAGGVTGLVENAAVTPLGKPVVLRVVAELKLF*
Ga0074045_1038205833300010341Bog Forest SoilVIVTVAAPTVALEEAVRVSVEVALPLAGGVTGLVENAAVTPEGRPDALSVVAELK
Ga0074044_1013171113300010343Bog Forest SoilVIVTVAAPVAAVEEAVSVSVEVALPFAAGVTGLVENEAVTPLGRPLALRVVAELNPFWLV
Ga0126377_1026118113300010362Tropical Forest SoilVIFVLWDNVPDVPVTVTVDVPKVAVGEAVKVNNEVTLPPDGGVTGFGLNAAVTPLGRFVAERVVAELKPLTLVTVIV
Ga0126347_111361923300010867Boreal Forest SoilMVTVAVPVVAVPEAVRVRVEVTLPFAGGVTGFGEHAAVTPLGKPDALSVVAELKPFR
Ga0126356_1087395423300010877Boreal Forest SoilCNPTEEFTVRAMVALWVSVPDVPVMVTVAAPVVAVAEAVSVSVDVALPFAGGVTGFVENAAVSPLGNPVALSVVAELKLF*
Ga0138555_116004423300011075Peatlands SoilVLWWSEAEVPVTVTVAVPVAAVPEAVSVRVDVAVPFAGGVTGLVENVAVTPLGKPVAVRVVAELKLF*
Ga0138572_103710813300011077Peatlands SoilMVALWLSEPEVPVTVTVAVRRVAVAEAVSVSTDVAVPFAGGVTGLAENAAVTPLGRP
Ga0150983_1220902713300011120Forest SoilMVALCVSEPEVPVTVTVAVPVVALAEAVSVSVEVALPFAGGVTGFVEYAAVTPLGKPVVLSVV
Ga0150983_1372461313300011120Forest SoilMVVLCVSEPDVPVTVTVLVPEAADEEAVNVKVEVALPFAGGVTGLVEKAAVTPLGNPDALSVVAELNPFWL
Ga0150983_1381478423300011120Forest SoilMVALWTSDPDVPVTVTVAVPTVAVEEAVSVRVEVALPFAGGVTGFVEYAAVTPLGKPVVLSVVAELKLF*
Ga0150983_1452956113300011120Forest SoilVSDPEVPVTVTVALPVVAVPEAVSVSVEVALPLAGGVTGLVENPAVTPLGNPDALNVVAELKLF*
Ga0150983_1670926723300011120Forest SoilMVVLCTSDPEVPVTVTVLVPDGAEADAVKVKVEVALPFAGGVTGLVEKAAVTPVGSPEALSVVAEL
Ga0137392_1017497223300011269Vadose Zone SoilVSEPDVPVTVTVALPVVAVAEAVSVSVEVALPFAGGVTGFVEKAAVTPLGNPVALSVVAELKLF*
Ga0137393_1042166013300011271Vadose Zone SoilTVTVALPVVAVAEAVSVSVEVALPFAGGVTGFVEKAAVTPLGNPVALSVVAELKLF*
Ga0137388_1001935413300012189Vadose Zone SoilMVVECVSAPDVPVIVTVALPVVAVPDAVSIRVDVAVPFAGGVTGLVENAAVTPPGKPEALSV
Ga0137382_1065989513300012200Vadose Zone SoilVLCDNVPDVPVTVIVAAPVVAVAEAVSVSVEVALPLAGGVTGLVENAAVTPLGRPVALSVVAELKLF*
Ga0137362_1150921713300012205Vadose Zone SoilMVVECVSAPEVPVTVTVALPVVAVPEAVSVRVDVALPFAGGVTGLVENAAVTPLGKPEALSV
Ga0150985_10992212213300012212Avena Fatua RhizosphereMVALCVREPEVPVTVMLTVPVVAVPDAVNVRVDVAVPLAGGVTGLLENAAVTPLGNPEALRVVAALNPTRL
Ga0137370_1068522313300012285Vadose Zone SoilMVMFDVPVVAVPEAVSVSVELALLLAGGVTGFGENAAVTPLGKLEALSVVAELKPFRLV
Ga0137361_1155347313300012362Vadose Zone SoilMVVLCVIEPEVPVTVTVLVPAVAVEDAVNVKVDVALPFTGGVTGLGEKAAVTPLGSPE
Ga0137390_1167864113300012363Vadose Zone SoilVLTVRLTVVLWVSEPEVAVRVTVAGPVAAEAEAVRVKVEVALPLAGGVTGFAEKAAVTPLGSPEALRLVAELNPPRLETVRVLV
Ga0181517_1042626723300014160BogMVVVPVAAEAEAVSVRVEFTLPFAGGVTGFGENPAVTPLGRPEALSVVAELKLF*
Ga0181523_1008216343300014165BogMVAVPTAAVEEAVSVNTEVALPLAGGVTGLVENVAVTPLGKPLALRVVAEL
Ga0181523_1070849523300014165BogVIVTVAAPTVALEEAVSVSVEVALPFAAGVTGLVENVAVTPAGRPVALNVVAELKP
Ga0181526_1017380823300014200BogLFIVNTIVVLFVSEPELPVTVTVAVPVVAEEEAVSVRVDVALAFALGVTELGEKLAVTPLGRPVALNVVAVLKLF*
Ga0181536_1027245323300014638BogMVALWLSEPEVPVTVTVAAPVVAVEEAVSVRVEVTLPFAAGVTGLDENAAVTPVGSPV
Ga0181522_1026127633300014657BogMVAVPTAAVEEAVSVNTEVALPLAGGVTGLVENVAVTPLGKPLALRVVAELKPF*
Ga0181522_1046118513300014657BogDYFVIVKAIVVFFVSEPEVPVTVTVAVPMVAEEEAVSVRVDVALPFALGVTELGKKLAVTPLGRPVALNAVAELKLF*
Ga0181522_1089586713300014657BogVSDPEVPVTVTVAVPTVAVEEAVSVRIEVALPFAGGVTGLVEKAAVTPVGRPLTLSVVAELKLFWLVM
Ga0167668_103466223300015193Glacier Forefield SoilMVVECVSAPEVPVMVTVALPVVAVPEAVSVRVDVALPFAGGVTGLVENAAVTPLDKPEAL
Ga0167638_109447913300015197Glacier Forefield SoilMPVMVTVDVPVVAVEEAVRVSVEFALPFAGGVTGFVENVAVTPLGKPEALSVV
Ga0137412_1039337323300015242Vadose Zone SoilVTVAVPTVAVAEAVRVSVELALPFAGGVTGFVEYAAVTPLGNPVVLRVVAELKLF*
Ga0137409_1063384213300015245Vadose Zone SoilVPVTVTVAVPTVAVAEAVRVSVEVALPFAGGVTGFVEYAAVTPLGNPVVLRVVAELKLF*
Ga0187801_1031960913300017933Freshwater SedimentLTVSEIVVEWVSEPEVPVTVTVAVPVVADAEAVNVRVEVALPLAGGVTGLVEKAAATPVGKPVALSVVAALKLF
Ga0187847_1000125323300017948PeatlandVSEPELPVTVTVAVPVVAEEEAVSVRVDVALAFALGVTELGEKLAVTPLGRPVALNVVAVLKLF
Ga0187781_1023172223300017972Tropical PeatlandVIVTVAAPTVAVEEAVSVRVEVALPLAAGVTGLVEKLAVTPEGRPLALSVVAELKPF
Ga0187777_1147788113300017974Tropical PeatlandVIEPEAPVIVRAAVPVVAEEDAVRVRVEVVLPFAGGVTGLVEKVAVTPLGNPVAL
Ga0187855_1013902423300018038PeatlandLSSFESCNASRHDYLFIVNTIVVLFVSEPELPVTVTVAVPVVAEEEAVSVRVDVALAFALGVTELGEKLAVTPLGRPVALNVVAVLKLF
Ga0187862_1046590823300018040PeatlandLFIVNTIVVLFVSEPELPVTVTVAVPVVAEEEAVSVRVDVALAFALGVTELGEKLAVTPLGRPVALNVVAVLKLF
Ga0187890_1081600713300018044PeatlandMVVVPVAAEAEAVSVRVEFTLPFAGGVTGLGENPAVTPLGRAEALSVVAELKLF
Ga0187769_1004966953300018086Tropical PeatlandMVTVAVPTVALEEAVSVRVEVALPFAGGVTGLVENVAVTPLGKPLALSVVAELNPF
Ga0181504_112088013300019258PeatlandVVDPDVPVIVTVAAPTVALEEAVSVRVEVALPFAGGVTGLVENAAVTPVGKPEALNVV
Ga0187800_147274513300019278PeatlandMVMVAVPVAALEEAVSVSVEVVLPLAGGVTGLVENDAVTPLGKPLALSVTAELKLFWLVT
Ga0210407_1102629523300020579SoilCESDPDVPVTVTVAVPVVAVAEAVRVSVEAALPLAGGVTGLVENAAVTPLGNPDALNVVAELKLF
Ga0210399_1090149513300020581SoilVAVPTVAVADAVRVRVEVALPLAGGVTGFVEYAAVTPLGNPVVLSVVAELKLF
Ga0210396_1099527613300021180SoilVPEVPVTVTVAVPVVAVADAVSVSTDVTDPFGAGVTGFTEKPAVTPLGSPLAASVVAELKLF
Ga0210393_1059495723300021401SoilVIVTVAVPTVAVEEAVSVSVEVALPLAGGVTGLVENAAVTPLGRPDALNVVAE
Ga0210389_1007575513300021404SoilVIVTVAAPTVAAAEAVSVSVEVTLPFAAGVTGLVENAAVTPLGNPVADNVVAEL
Ga0210386_1123923513300021406SoilVSEIVVLWESDPDVPVTVTVAVPVVAVAEAVRVSVEAALPLAGGVTGLVENAAVTPLGNPDALNVVAELKLF
Ga0210392_1092738623300021475SoilPEVPVTVTVAAPVVAVAEAVRVSVEVALPFAGGVTGLVENAAVTPLGRPVALKVVAELKL
Ga0210402_1193730423300021478SoilLTVRAMVVECESEPETPVTVTVAFPTVADAEAVNVKVELALPLAGGVTGLGEKAAVTPVGKPVALSVVAELKLFWLVMVTVLVPVPP
Ga0210409_1034844713300021559SoilMVAERMSEPEVPVTVTFVVPVGAVAAAVKVKAEVALPLAGGVTGLVENAPVTPVGSPEA
Ga0213852_116772123300021858WatershedsLTVRAIVVEWVSVPEVPVRVTVAVPTVADAEAVKVRVEVALPLAGGVTGLVEKAAVTPVGSPFVLRVVAELKLF
Ga0242664_111610323300022527SoilPEVPVTVTVAAPVVAVAEAVRVSVEVALPLAGGVTGLVENAAVTPLGNPVALKVVAELKV
Ga0222756_105903513300022709SoilVVDPDVPVIVTVAAPTVAVEEAVSVRVEVALPFAGGVTGLVENAAVTPLGKPDALNV
Ga0242673_109154913300022716SoilVVEPEVPVIVTVAAPTVALAEAVSVRVEVTLPFAAGVTGLVENAAVTPVGKPVALNVVAE
Ga0242666_108783313300022721SoilMLVPWLSEPEVPVTVTVAVPTVALAAAVSVRVEVALLFAGGVTGLGENAAVTPLGKPLAVSEVAELNPF
Ga0224544_100817843300023250SoilVIVTVAMPTVALEEAVNVRVEAALPFAGGVTGLVENAAVTPEGRPDALSVVAELK
Ga0207763_101896923300026879Tropical Forest SoilVSDPDVPVTVTVAAPVVAVAEAVSVSVEVALPFAGGVTGLVENAAVTPLGNPVALSVVAELKLF
Ga0208488_106754213300027110Forest SoilVVEPDVPVIVTVAAPTVALAEAVSVRVEVALPFAAGVTGLVENAAVTPAGSPVALNVVAE
Ga0209736_114236523300027660Forest SoilVSEPDVPVTVTVAAPVVAVADAVNVSVEVALPLAGGVTGLVEKAAVTPLGKPVALSVVAELKLP
Ga0209446_112724223300027698Bog Forest SoilMVVLWLSEPEVPVTVTVAVPMVALPEAVSVRFEVVLPFAAGVTGFFENFAVTPLGTPVALSVVAELKLLWLVMVMVLL
Ga0209039_1035121113300027825Bog Forest SoilVSEPEVPVIVTVAAPTVALAEAVSVSVEVALPFAAGVTGLVEKVAVTPLGRPVALSVVADEKLF
Ga0209274_1006823423300027853SoilVPVAVTLNVPVVAVPVAVNVSVEVTAPFAGGVTGFGENAAVTPLGRPEALSVVAELKLFWLVIVIVLVAFEP
Ga0209167_10000534263300027867Surface SoilVVEPEVPVIVTVAAPVVAVAEAVSVRTEVTLPLAAGVTGLVENAAVTPVGKPVALRVVAELKLF
Ga0209380_1016672423300027889SoilVPEDEFTVNAMVALCVSEPEVPVTVTVAVPVVAEEDAVSVSVEVALPLAGGVTGLVENAAVTPLGKPVALSVVAELKLF
Ga0209624_1059851923300027895Forest SoilVPEVPVTVTVAVPVVAVADAVSVSTDVTDPFGAGVTGFTEKPAVTPLGSPLAASAVAELKLF
Ga0209488_1110129623300027903Vadose Zone SoilVSEPEVPVTVTVLVPAAAVAEAVKVKVEVAVPLAGGVTGLGEKAAVTPLGSPEALSVVAELN
Ga0302202_1039894523300028762BogVPEVPVTVTVTVPVAAVAEAVNVSTEVALLFAGGVTGFTENAAVTPLGNPVAVSVVADEKLF
Ga0302303_1005936943300028776PalsaVIVTVAVPTVALEEAVNVRVEVALPFAGGVTGLVENAAVTPEGRPDALSVVAELKPP
Ga0311341_1081144423300029908BogVIVTVAVPTVAVEEAVSVSVELALPFAGGVTGFVENAAVTPEGRPDALNVVAELKPP
Ga0311340_1067308923300029943PalsaMVKAIVVFLVSEPEVPVTVTVAVPMVAEEEAVSVRVDVALPFALGVTELGKKLAMTPLGRPVALNAVAELKLF
Ga0311371_1126781313300029951PalsaVIVTVAAPVVAVAEAVSVSVDVTLPFAGGVTGLVENAAVTPEGRPLALSVVAELKLFWLVIVI
Ga0311356_1112796513300030617PalsaVSEPDVPVTVTVAVPTVAVEEAVSVRVEVALPLAGGVTGLVEKAAVTPVGRPLTVSVVA
Ga0311354_1071705833300030618PalsaEVPVTVTVAVQMVAEEEAVSVRVDVALPFALGVTELGKKLAMTPLGRPVALNAVAELKLF
Ga0310039_1030587113300030706Peatlands SoilVTVAVPVAAVAEAVSVRVEFTLPFAGGVTGLGENPAVTPLGKLEALSVVAELKLF
Ga0310038_1032908323300030707Peatlands SoilLSEPEVPVTVTVAVPVAAVPEAVSVRVDVAVPFAGGVTGLVENVAVTPLGKPVAVRVVAELKLF
Ga0265459_1303064913300030741SoilVVDPDVPVMVTVAVPTVALEEAVSVSVEVALPFAGGVTGLVEKAAVTPAGRPVAVSVV
Ga0265461_1100300023300030743SoilVSEPDVPVIVTVAVPTVAVEEAVSVSVEVALPFAGGVTGLVEKAAVTPAGRPVAVSVVAELKLF
Ga0265760_1036867523300031090SoilVVEPEVPVIVTVAAPTVAVEEAVSVRVEVTLPFAGGVTGLVENAAVTPVGRPVALNVVA
Ga0265332_1034618713300031238RhizosphereVAVCNPTDELTVNAIVVECVSEPETPVTVTVAVPTVAEADAVKVRVEVALPLAGGVTGFVENAAVTPVGSPVALKVVAELKLF
Ga0265328_1005748623300031239RhizospherePTDELTVNAIVVECVSEPETPVTVTVAVPTVAEADAVKVRVEVALPLAGGVTGFVENAAVTPVGSPVALKVVAELKLF
Ga0310686_10041882523300031708SoilVSELEVPVTVTVAVPVVAEEEAVSVRVDVALPFALGVTELGEKLAVTPLGRPVALNVVAELKLF
Ga0310686_11861920623300031708SoilMFVPWLSEPEVPVTVIVEVPVVAVAEAVRVRVEVTLPFAGGVTGLGENPAVTPLGRPEALSVVAELKLS
Ga0307476_1061553623300031715Hardwood Forest SoilEVPVTVTVAVPVVAVADAVSVSTDVTDPFGAGVTGFTEKPAVTPLGSPLAASVVAELKLF
Ga0307474_1137813023300031718Hardwood Forest SoilLSNTAVCNPTDEFTVNEIVVPCVSDPEVPVIVTVAVPVVAVAEAVRVSVDAALPLAGGVTGLVENAAVTPLGNPDALNVVAELKLF
Ga0307477_1067723323300031753Hardwood Forest SoilVSVPEVPVMVTVALPVVAVAEAVSVRVDVALPFAGGVTGFVENAAVTPLGKPVALSVVAELKLF
Ga0307475_1078051433300031754Hardwood Forest SoilVAVPVVAVEEAVSVSVEDVLPFAGGVTGLVENDAVTPLGRPEALRVVAELKPFRLLTV
Ga0307478_1096816923300031823Hardwood Forest SoilVVDPDVPVIVTVAAPVAAEADAVKVRVEVTLPFAGGVTGLVENAAVTPEGRPLALSVVAELN
Ga0307478_1098309723300031823Hardwood Forest SoilVPVVAVADAVSVSTDVTDPFGAGVTGFTEKPAVTPLGSPLAASVVAELKLF
Ga0316036_11321913300031871SoilVVDPEVPVIVTVAAPVVAVAEAVKVSVEVTLPLAGGVTGLVENAAVTPLGNPEALNVVA
Ga0307470_1053601723300032174Hardwood Forest SoilLTLRAMVVEWVSVPEVPVTVTVAMPTVADAEDVNVRVEVALLLAGGVRGLVEKAAVTPLGKLVALKVMADPKLF
Ga0307470_1058395523300032174Hardwood Forest SoilLTFRVMVVEWVSVPEVPVKVTVAIPTVADAEAVNVRVEVALLLAGGVTGLVEKATVTPLGKPVALKVVAELKLF
Ga0307471_10075412423300032180Hardwood Forest SoilEVPVKVTVAIPTVADAEAVNVRVEVALLLAGGVTGLVEKATVTPLGKPVALKVVAELKLF
Ga0307471_10212272413300032180Hardwood Forest SoilVTVTVAAPVVAVADAVSVSVEVALPIAGGVTGFVENAAVTPLGRPVALSVVAELKLF
Ga0307471_10245269713300032180Hardwood Forest SoilVEPDVPVMVTVAVPVVAVEAAVSVKVEAALLFAGGVTGFGENAAVTPVGKPEALSVVAALKPF
Ga0326727_1092587923300033405Peat SoilLKTAVCAPRDELTVKAMLVLWLSEPEAPATVTVAVPTVAVAEAVNVRVEVALPSAAGVTGLLENAVVTPLGRPVALSVVAELKLF
Ga0370484_0114504_308_4813300034125Untreated Peat SoilVTVTVAVPTVADAEAVKVKVEVALPLAGGVTGFVEKAAVTPVGKPVVLSVVAELKLF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.