Metagenome Family F071906

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071906
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	91 residues
Representative Sequence	MAPKRGGGNPKKAVVGASHDNEWVPSLMGEMELNEMVEAGVLPDRVTAGWRPTDGEPYPMPHTDELVVFEDYFWRGLGLSVHPFLWDLLEF
Number of Associated Samples	60
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.02 %
% of genes near scaffold ends (potentially truncated)	12.40 %
% of genes from short scaffolds (< 2000 bps)	38.84 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.950 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (97.521 % of family members)
Environment Ontology (ENVO)	Unclassified (97.521 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (97.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.73% β-sheet: 0.00% Coil/Unstructured: 72.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04195	Transposase_28	60.33

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
All Organisms	root	All Organisms	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
cellular organisms	root	All Organisms → cellular organisms	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	14.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	13.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	11.57 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	11.57 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	11.57 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	11.57 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	1.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	11.57 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.95 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	11.57 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300013297\|Ga0157378_12297133	Not Available	591	Open in IMG/M
3300015267\|Ga0182122_1013647	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	790	Open in IMG/M
3300015268\|Ga0182154_1047978	Not Available	569	Open in IMG/M
3300015269\|Ga0182113_1047385	Not Available	626	Open in IMG/M
3300015274\|Ga0182188_1021030	Not Available	667	Open in IMG/M
3300015285\|Ga0182186_1017694	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	784	Open in IMG/M
3300015289\|Ga0182138_1048443	Not Available	603	Open in IMG/M
3300015289\|Ga0182138_1082997	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	514	Open in IMG/M
3300015291\|Ga0182125_1073760	Not Available	543	Open in IMG/M
3300015294\|Ga0182126_1008080	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1010	Open in IMG/M
3300015296\|Ga0182157_1037923	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	677	Open in IMG/M
3300015299\|Ga0182107_1053960	Not Available	616	Open in IMG/M
3300015300\|Ga0182108_1052722	Not Available	625	Open in IMG/M
3300015300\|Ga0182108_1070654	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	572	Open in IMG/M
3300015300\|Ga0182108_1080604	Not Available	549	Open in IMG/M
3300015302\|Ga0182143_1029682	Not Available	729	Open in IMG/M
3300015302\|Ga0182143_1033139	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	707	Open in IMG/M
3300015303\|Ga0182123_1027692	Not Available	722	Open in IMG/M
3300015303\|Ga0182123_1044701	Not Available	633	Open in IMG/M
3300015304\|Ga0182112_1074389	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	561	Open in IMG/M
3300015305\|Ga0182158_1047645	Not Available	637	Open in IMG/M
3300015308\|Ga0182142_1066240	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	598	Open in IMG/M
3300015322\|Ga0182110_1045398	Not Available	686	Open in IMG/M
3300015341\|Ga0182187_1070032	Not Available	730	Open in IMG/M
3300015341\|Ga0182187_1171585	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	532	Open in IMG/M
3300015341\|Ga0182187_1172234	Not Available	531	Open in IMG/M
3300015342\|Ga0182109_1178165	Not Available	548	Open in IMG/M
3300015343\|Ga0182155_1176266	Not Available	551	Open in IMG/M
3300015344\|Ga0182189_1185868	Not Available	545	Open in IMG/M
3300015345\|Ga0182111_1123361	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	655	Open in IMG/M
3300015345\|Ga0182111_1178016	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	569	Open in IMG/M
3300015346\|Ga0182139_1191766	Not Available	554	Open in IMG/M
3300015346\|Ga0182139_1231411	Not Available	514	Open in IMG/M
3300015347\|Ga0182177_1093460	Not Available	729	Open in IMG/M
3300015351\|Ga0182161_1176181	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	595	Open in IMG/M
3300015355\|Ga0182159_1175276	Not Available	680	Open in IMG/M
3300015361\|Ga0182145_1143495	Not Available	557	Open in IMG/M
3300017413\|Ga0182222_1105235	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	505	Open in IMG/M
3300017415\|Ga0182202_1012476	Not Available	1048	Open in IMG/M
3300017415\|Ga0182202_1078797	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	604	Open in IMG/M
3300017425\|Ga0182224_1067741	Not Available	668	Open in IMG/M
3300017427\|Ga0182190_1109853	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	579	Open in IMG/M
3300017430\|Ga0182192_1063384	Not Available	712	Open in IMG/M
3300017433\|Ga0182206_1124274	Not Available	545	Open in IMG/M
3300017684\|Ga0182225_1101730	Not Available	561	Open in IMG/M
3300017685\|Ga0182227_1119590	Not Available	528	Open in IMG/M
3300017689\|Ga0182231_1105384	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	97.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	97.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	97.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	97.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105243_110009371	3300009148	Miscanthus Rhizosphere	MAPKRGVGNSKKVAAKASLDNEWVPSLMGEVEINRMVEVGILSDRVTAEWRPASSEPYPMPHTDEAIVFEDYFWHGLGFPIHPFLRDLLEF*
Ga0157378_122971331	3300013297	Miscanthus Rhizosphere	MAPKRGGGNAKKAAAGTSRDKEWVLSLMGEMELNEMVEAGILPDRVTTGWHPTDDEPYLMPHTDEFIVFEDYFWRGLGLPVHPILRDLLEY*
Ga0182122_10136472	3300015267	Miscanthus Phyllosphere	MASKRGGGNPKKAAAGASYDKEWVPSLMGETELNKMVEAGVLPDRVTAGWCPADDEPYPMPHTDELVVFEDYFWRGLGLPVHPFLRDLLEY*
Ga0182154_10130651	3300015268	Miscanthus Phyllosphere	MAPKRGGGNAKKVATGASHDKEWVPSLMGETELNEMVEAGTLPNRVTTEWRLADGEPYPMPHTDEVVVFEDYFWHGLGLPVHPFLWDLLEFWGVG
Ga0182154_10385262	3300015268	Miscanthus Phyllosphere	MVSKRGVGNPKKAATGASRDNEWVSSLMGEVEINRMVEASVLSDRVTAEWWLASGEPFPMPHTNEVVVFEDYFWCSLGFPIHPFLRDLLEF*
Ga0182154_10479781	3300015268	Miscanthus Phyllosphere	MVPKRGGGNAEKAAIGARHDKEWVPSLMGETELNEMVEAGVLPDRVTAGWRLANGEPYPMPHTDELVVFEDYFWHGLGLRVHPFLQDLLEF*
Ga0182113_10473851	3300015269	Miscanthus Phyllosphere	VKKASSDPDLGDGVEEGGGNPKKAATGVSHDKEWVMSLMGETELNDMVEAGILPDRITAGWRLADSEPYPMPHTDELVVFEDYFWRGLGLPVHPFLWDLLEY*
Ga0182113_10700932	3300015269	Miscanthus Phyllosphere	MAPKKGARNPKKVAAGASRDNEWVLSVMGEAEINRMVEAGVLSDCVTVGWWPASGESFPMPHTDKVVVFEDYFWRGLGFLIHPFLRDLLEF*
Ga0182188_10210301	3300015274	Miscanthus Phyllosphere	MAPKRGGGNPKKAATGASRDNEWVPSLMGEMELNEMVEVDVLPDCITTEWCPADGEPYPMPHTDELVVFEDYFWRGLGLSVHPFLRDLLEF*
Ga0182172_10312882	3300015275	Miscanthus Phyllosphere	MAPKRGVGNPKKATARASHDNEWVPSLMGEMEINRMVEAGVLPDRVTARWRPTNGEPYPMPHTDKAIVFEDYFWCGLGFPIHPFLRDLLEF*
Ga0182128_10314281	3300015277	Miscanthus Phyllosphere	MALKRRVGNLKKAATGASHDNEWVPSLMGEAEINRMVEAGILSDRVTAGWQLASSEPFPMPHTNEAIVFEDYFWRRSGFPIHSFLRDLLEF*
Ga0182128_10486312	3300015277	Miscanthus Phyllosphere	VGDLKEAAVGANRDNEWVPSLMWEVEINRMVEAGVLPDRVTAGWRPASGEPYPMPHIDEAIVFEDYFWHGIGFPIHPFLWDLLEF*
Ga0182128_10705481	3300015277	Miscanthus Phyllosphere	MALKRGARNSKKAAAEVSRDNEWVSSLMGEAEINGMVEAGVLPDCVTVGWRPANGEPYLMPHTDEAIVFEDYFWSGLGVPIHPFLRDLLEF*
Ga0182128_10750071	3300015277	Miscanthus Phyllosphere	RSETWPPKRGAGNPKKATSRASRDNEWVSSNMGEAEINRMVEASVLSNRVTAGWRSANGEPYPLPHTDKAIVFEGYFWCGLGFSIHPFLRDLLEF*
Ga0182160_10468641	3300015281	Miscanthus Phyllosphere	MAPKKGVGNPKKATAGASRDNEWVPSLMGETELNEMVEAGVLPDRVTAGWRPADGEPYPMPHTDEVIVFEDYFYCGLGIPIHPFLHDLLEY*
Ga0182124_10713191	3300015282	Miscanthus Phyllosphere	MVPKRGVGNPKKAAAGSSHDKEWVPSLMGEAELNGMVEAGVLPDRVTTGWHPANVEPYLMPHTDEVVVFEDYFWHELGFPVHPFLRDLLEFWGVSLCN
Ga0182124_10791592	3300015282	Miscanthus Phyllosphere	ALKPKKATTGGSRDEEWVPSKMGEVEINRMVEAGILPDRVTAGWRPASGEPFLMPHTDEVIVFADYFWHGLGFPIHPFLRDLLEF*
Ga0182186_10176942	3300015285	Miscanthus Phyllosphere	MALKRGGGNAKKAAAEASCDKEWVPSLMGETELIEMVEAGVLPDRVTAGWRLADGVPYPMPHTDELVVFEDYFWRGLGLLVHPFLRGLLEY*
Ga0182176_10166111	3300015286	Miscanthus Phyllosphere	MICEMAPKKGAMNPKKVSAGARCDEEWVPSWMGEAELNRLVEAGVLPDHITAGWRSALGEPYPMPHTDDIVVFEDYFWRRLGFPIHSFLRDLLEF*
Ga0182176_10463081	3300015286	Miscanthus Phyllosphere	MAPKKGSGNPKKATAGASHDNEWVPSLMGEAEINRMVEAGGLPNHVTAGWWPTNGDPYRMPHTNETIVFEDYFWSGLGVPIHPFLRDLLEF*
Ga0182171_10073021	3300015287	Miscanthus Phyllosphere	MAPKRGVGNPEKTAARASRDNEWVLSLMGEVEINRMVEVGIPPGRVIAGWWPTNGEPYPMPHTDKAVVFEDYFWRRLGFPIHSFLRDLLEF*
Ga0182171_10725391	3300015287	Miscanthus Phyllosphere	MAPKRGAGNPKKVTVGASRDNEWVLSNMGEVKINRMVEVGVLSDHVTAGLRPASGEPFPMPHTNKVVVFEDYLWRRLGFLVHPFLRDL
Ga0182138_10376191	3300015289	Miscanthus Phyllosphere	MAPKKGAGIPKKVSAKVSRDEEWVPSRTGEVELNRLVEAGVLPDCIIAEWRSASGEPYPMPHTDKVVVFEDYFWHGLGFPVHPFLEGSAGVLESQSM*
Ga0182138_10484431	3300015289	Miscanthus Phyllosphere	MAPKKGSGNTKKAAAGASRDKEWVPSLMGETELNGMVEAGILPDRVTAGWHPADGEPYPMPHIDVVVVFKDYFWHGLELLMHLFLWDLLEYW
Ga0182138_10634531	3300015289	Miscanthus Phyllosphere	MAPKRGGGNPKKAAAGASHDNEWVPSLMGETELNEMVEAGILPDHITAGWHLADGEPYLMPHTDELIVFKDYFWRGLGLPIHPFLQDLLEFWGVSLC
Ga0182138_10829971	3300015289	Miscanthus Phyllosphere	KRGVGNPKKAAAEASRDNEWMPSLMGEMELNKMVEAGVLPDRVTAGWRPADGEPYPMPHTDEVIVFEDYFWCGLGLPVHPFLRDLLEF*
Ga0182125_10737601	3300015291	Miscanthus Phyllosphere	MASKRGGGNPKKAAAGASYDKEWVLSLMGEMALNEMVDGEPYPMPHTDEVVVFEDYFWHGLGLLVHPFLWDLLEFW
Ga0182125_10872631	3300015291	Miscanthus Phyllosphere	MAPKRGVDNPKKAAAEASHDNEWVLSLMGEMEINRMVEAGILPDRVTAKWWLANGEPYPIPHTNEDVVFEDYFWRRLGFPIHAFLRGL*
Ga0182126_10080801	3300015294	Miscanthus Phyllosphere	MVPKRGVGNPKKAATGASCDNEWVPSLMREVEINGMVEADVLPDCVTAGWQPAYNEPYPMLHSDEAIVFEDYFWRGLGFPIHPFLRDLLEF*
Ga0182157_10379231	3300015296	Miscanthus Phyllosphere	MAPKRRVGNPKKAAVRASHDNEWVPSLMGEAEINGMVEVGVLPDRVIAGWRPADGELYPMPHTDEVIVFEDYFWRGLGLPVHPFLRDLLEF*
Ga0182157_11004512	3300015296	Miscanthus Phyllosphere	MAPKRGVGDLKEAAVGANRDNEWVPSLMWEVEINRMVEAGVLLDRVTAGWWPASGEPYLMPHTDEAVVFEDYFWHELGVPIQPFLRDLLEF*
Ga0182106_10320781	3300015298	Miscanthus Phyllosphere	MAPKRGVGDLKEAAVGANRDNEWVPSLMWEVEINRMVEAGVLPDRVTAGWRPASGEPYPMPHIDEAVVFEDYFLHGLGVHVHPFLRDLLKF*
Ga0182107_10483002	3300015299	Miscanthus Phyllosphere	MAPKRGVVNPKKVAAGSSHDKEWVPSLMGEAELNRMVEAGVLPDRVTVGWRPTSGEAYPMPHTDKLVVFADYFWRRLGFPVHPFLRDLLEFWRVSLCNL
Ga0182107_10539601	3300015299	Miscanthus Phyllosphere	MVPKRGGGNAKKVAARMSYDKEWVLSLMGEMELNKMVEAGVLPDRVTTGWRSADGEPYLMPHTDELVVFEDYFWRGLGLPVHPFLRDLLEY*
Ga0182108_10527222	3300015300	Miscanthus Phyllosphere	MALKRGGGNPKKAAAGASRDKEWVPSLMGETELNEMVEAGVLPDRITTGWHPADGEPYLMPHTDELVVFEDYFWRGLELSVHPFLRDLLEYWGVSLC
Ga0182108_10706541	3300015300	Miscanthus Phyllosphere	MAPKRGGGNPKKVAVGVSHDKEWVPSLMGETEVNKMVEAGILPDHITTGWHPADGEPYPMPHTDELVVFEDYFWRGLGLPVHPFLRDLLEY*
Ga0182108_10806041	3300015300	Miscanthus Phyllosphere	MAPKRGGGNAKKASTRVSHDKEWVPILMGETELNEMVEVGIFPDCVTAGWRPADGEPYPMPHTNKLVVFEDYFWRGLGLLVHLSCGICWSFGE*
Ga0182143_10296821	3300015302	Miscanthus Phyllosphere	MAPKRGDGNVKKAATRASHDKEWVLSLMGETELNEMVEAGVLPDRVTAGWRSTNGEPYSMPHNDKLIVFEDYFWRGLGLPVHPILRDLLEY*
Ga0182143_10331391	3300015302	Miscanthus Phyllosphere	GGNPKKAATRVSHDKEWVPSLMGEMELNGMVEAGVLPDCVTTRWCLADGEPYPMPHTDEVVVFKDYFWHGLGFLIHPFLWVLLEF*
Ga0182123_10276922	3300015303	Miscanthus Phyllosphere	MAPKRGGGNAKKAAARASRDKEWVPSLMGEMELNEMVEAGVLPDRVTAGWRLANGEPYPMPHTNELVVFKDYFWRGLGLPVHPFLWHLLEF*
Ga0182123_10447011	3300015303	Miscanthus Phyllosphere	LRKLSSSDLDLRDGAEEGGGNPKKVDAGASHDKEWVPSLMGETELNEMVKAGVLPDRVTARWHPTNGEPYLMAHTNEVIVFEDYFWHGLGLPVHPFLRDLLEF*
Ga0182112_10622461	3300015304	Miscanthus Phyllosphere	MAPKKEGGNSKKATAGASHDKEWVPSLMGEAKLNGMVEAGILPNHITTGWRPADNETFLMPHTDEVVVFEDYFWHGLGLPIHPFLRDLLEF*
Ga0182112_10635091	3300015304	Miscanthus Phyllosphere	MAPKKGAVKPKKAATVASHDEEWVPSRMGEAEINRMVEAGVLSDCVTVGWRPASGGPFSMPHTDEVVVFEDYFWRGLGFLIHPFLRDLLEF*
Ga0182112_10672601	3300015304	Miscanthus Phyllosphere	KKGSRNPKKATVGASCDNEWVPSLMGEAKINMMVEASDLPDHVTAEWRPANGEPYPMPHTDEAVVFEDYFWHGLGFPIHPLLRDLLEF*
Ga0182112_10743891	3300015304	Miscanthus Phyllosphere	MAPKRGGGNAKKANAVMSHEKEWVSSLMQETELNEMVEVGMLPDSVTAGWRPANGEPYPMPHTDELVVFEDYFWHGLGLSVHPFLQDLLEY*
Ga0182158_10476451	3300015305	Miscanthus Phyllosphere	MAPKREGGNAKKAVTGASHDKEWVPSLMGEMELNEMVEAGVLPDRITSGWRPTDGEPYPMPHTDELVVFKDYFWRGLGLLVHPFLRDLLQY*
Ga0182158_10806651	3300015305	Miscanthus Phyllosphere	MVPKRGVGNPKKATAGASQDHEWVSSLMGETELNGMVEAGILPDRVTAGWRPTDGEPYPMPHTDKVIVFEDYFWHKLGFPIHPFLWDLLELWE*
Ga0182144_10788643	3300015307	Miscanthus Phyllosphere	MAPKRGDGNPKKVATGASYDKEWVSSLMGEMELNDMVEAGVLPDRVTVGWRPTDGVPYPMPHTNEVIVFEDYFWRRLGFPIHPFLRDL*
Ga0182142_10276842	3300015308	Miscanthus Phyllosphere	MAPKRGGGNAKKAAVGMSRDKEWVPSLMEETELNEMVEAGVLPDRVTTGWRPAKGEPYPMPHTDEVVVFEDYFWRGLGVPVHPFLRDLLEFW*
Ga0182142_10662402	3300015308	Miscanthus Phyllosphere	MAPKRGGGNTKKAAAGTSRDKEWVPSLMGETELNEMVEVGVLPDHVTIGWCPTDGEPYLMPHTDELVVFEDYFRHGLGLPVHPFLRDLLEY*
Ga0182142_10836661	3300015308	Miscanthus Phyllosphere	KKASARASRDNEWVPSLMGETEPNGMVETGVLPDRVTTGWRLADGEPYPMPHTNEVVVFEDYFWRSLGFPIHPFLHDLLEC*
Ga0182140_10580122	3300015314	Miscanthus Phyllosphere	MAPKKGSGNPKKATVGASHDNEWVPSFMGEAEINRMVEASDLPDHVTAEWRPANGEPYPMPHTDEAVVFEDYFWRGLGVHVRPFLRDLLKF*
Ga0182127_10859761	3300015321	Miscanthus Phyllosphere	MASKRGVGNPKKVTTGASRDNEWVPSLMGEAEINGMVEAGVLSDRVTAGWRPANGEPYPMPHTDEAIVFEDYFWRRLGFPIHPYRICWSSRE*
Ga0182110_10429252	3300015322	Miscanthus Phyllosphere	MKKATAGASHDNEWVSSLMGEMELIGMVEVGVLPDCVTAGWCPADGEPFPMSHTDKVVVFEDYFWRGLGFHIHPFLCDLLEF*
Ga0182110_10453981	3300015322	Miscanthus Phyllosphere	MAPKRGGGNPKKAVAGTSHDKEWVPSLMGETELNEMVEACVLPDRATAGWRPTDGEPYPMPHIDKLIVFEDYFWRGLGLLVHPFLWDLLEF*
Ga0182129_10360481	3300015323	Miscanthus Phyllosphere	MAPKKGAGNPKKAIAGVSRDEKWVPSHMGEAELNRLVEVGDLPDRVTARWRPTNGEPYPMPHTDEAVVFEDYFWRGL*
Ga0182187_10423981	3300015341	Miscanthus Phyllosphere	MAPKRGLGNPMKATARASRDNEWVLSLKGEMKLNGMVEAGVLPDHVTTGSRPANGEPYPMPHTDEVIVFEDYFWHGLGLPVHPFLRDLLEF*
Ga0182187_10700321	3300015341	Miscanthus Phyllosphere	MAPKKGGGNPKKAAAGASLDKEWVLSLMGETELNEMVEAGVLPDHITAKWRPADGEPYPMPHTDEVIVFEDYFWRGLGLPVHPFLRDLLAY*
Ga0182187_11715851	3300015341	Miscanthus Phyllosphere	MAPKRGGGNAKKATTGASHDNEWVPSLMGETELNEMVEVRILPDHVIAGWHPTDGEPYLMPHTDKLVVFEDYLWHGLGLSVHPFLRDLFEY*
Ga0182187_11722342	3300015341	Miscanthus Phyllosphere	MAPKRGGGNLKKAATGMSRDKEWVPKLMGETELNQMVEVGVLLDRVTVGWRPTDSEPYLMPHTDEFFVFEDYFWRGLGLLMHPFLRDLMEYWGVSLCN
Ga0182109_10477361	3300015342	Miscanthus Phyllosphere	MASKKGVGNPKKASTGVSHDDEWVPSHTGEAELNRMVEAGVLPDRVIAGWWPAYGEPYPMPHTDEAVVFEDYFWRRLGFPVHPFFRDLLEF*
Ga0182109_11781651	3300015342	Miscanthus Phyllosphere	MAPKRGGGNAKKAAAGSSRDKEWVPSLMGETELNEMVEADILPDCVTAGWRPANGEPYPMPHTDELVVFKDYFWHGLGLLVHPFLQDLLEY*
Ga0182155_11064412	3300015343	Miscanthus Phyllosphere	MEPKRGARNPKKATARASRDNEWIPSNMGEAEINKMVEAGILSDCVTVGWWPASGEPISMPHTDEVVVFEDYFWRRLGFPVHPFLRDLLEF*
Ga0182155_11583901	3300015343	Miscanthus Phyllosphere	MAPKRGVRNPKKAATGASRDNEWVPSLMGEEEINGMVEAGVLSDHVTAGWWLANGEPYPMPHTNEVIIFEDYFWLGLGFSVHHFLQDLLEFWGVNLCNLHP
Ga0182155_11762661	3300015343	Miscanthus Phyllosphere	MATRVSHNKEWVPSLMGETELNEMVEAGVPPDRVTAEWHSADGEPCPMPHIDKLIVFEDYFWRGLGLSVHPFLQDQ
Ga0182189_10610343	3300015344	Miscanthus Phyllosphere	MAPKKGSSNPKKATTGASCDNEWVPSLMGEVEINRMVEAGILLDRVTAGWRPTNDEPYPMPHTDEAVVFEDYFWHGLGVHVHPFLRDLLKF*
Ga0182189_11509421	3300015344	Miscanthus Phyllosphere	MAPKRGGGNPKKATAGASRDKEWVQSLMGETELNEMVEAGVLPNHVTAGWRPADGEPYSMPHTDKVVVFEDYFWRGLGLLVHPFLRDLLEF*
Ga0182189_11858681	3300015344	Miscanthus Phyllosphere	MAPKRGGGNPKKAVVGASHDNEWVPSLMGEMELNEMVEAGVLPDRVTAGWRPTDGEPYPMPHTDELVVFEDYFWRGLGLSVHPFLWDLLEF*
Ga0182111_11233611	3300015345	Miscanthus Phyllosphere	MAPKRGGGNQKKVAAGTSHDKEWVPSLMGETELNKMVAAGVLPERVTTGWRPADGEPYPMPHTDEVIVFEDYFYCGLGIPIHPFLHDLLEY*
Ga0182111_11359421	3300015345	Miscanthus Phyllosphere	MAPKRGVDNPKKVTVGASHDNEWVPLLMGEIELSGMVEAGILPDRVTTGWHPTDGEPYPMPHTDKVIVFEDYFWHKLGFPIHPFLWDLLELWE*
Ga0182111_11780161	3300015345	Miscanthus Phyllosphere	MASKRGGGNTKKATAGVSHDKEWVLSLMGETEHNEMVEAGVLPNRVTTGWRLADGEPYPMPHTDNLVVFEDYFWCGLGLPIHPFLRDLLEY*
Ga0182139_10460462	3300015346	Miscanthus Phyllosphere	MAPKKGSGNPKKATAGASRDNEWVPLLMGEAEINRMVEAGVLPDRVTAGWRSAKGEPYPMPHTDEAVVFKVYFWRSLRVPVHPFLRDLLEF*
Ga0182139_11495911	3300015346	Miscanthus Phyllosphere	MAPKKGAGIPKKASAEVSRDEEWVPSCMGEAELNRMVVAGILPDRVTAKWRPASGEPYPMPHTDKVVVFEDYFWHGLGFPIHPFLRDLLEF*
Ga0182139_11873071	3300015346	Miscanthus Phyllosphere	MPPKKGSGNPKKAAAGANRYNEWVLSVMGEVEINRMVEEGVLLDRVTARWWPASGEPFPMSHTDKAVVFEDYFWCGLGFQVHPF
Ga0182139_11917661	3300015346	Miscanthus Phyllosphere	MASEKGGGNPKKAAAKMSHDKEWVSSLMGETELNEMVAAGVLPDHVTVRWCLADGEPYPMPHTDKVVVFEDYFWRRLGLLVHPFLWDLLEF*
Ga0182139_11941521	3300015346	Miscanthus Phyllosphere	MAPKKGSGNLKKAVAGASRDNERVPLLMGEAAEINRMVEASVLSNRVTAGWRSANGEPYPLPHTDKAIVFEGYFWCGLGFSIHPFLRDLLEF*
Ga0182139_12314111	3300015346	Miscanthus Phyllosphere	MTSKRGGGNAKKAATRASRDKEWVPSLMGETELNEMVEASVLPDCVTAGWCPTDGEPYLMPHTDELVVFEDYFWHGLGLPVHPFLRDLLEY*
Ga0182177_10453763	3300015347	Miscanthus Phyllosphere	MAPKMGAGNPKKASTGVSRDEEWVPSCTGEAELNRMVEAGVLPDHITAEWRPTSGEPYPMPHTDKAVVFEDYFWCGLGFSIHPFLRDLLEF*
Ga0182177_10934601	3300015347	Miscanthus Phyllosphere	MAPKRIGGNAKKATVGASHDKEWVPSLMGETELNEMVEAGVLPDHVTVGWRLADGEPYPMPHTDELIVFEDYFWRGLGLPVHPFLRDLLEYWGVSL
Ga0182177_11368621	3300015347	Miscanthus Phyllosphere	MAPKKGSRNPKKATVGASCDNEWVPSLMGEAKINMMVEASDLPDHVTAEWRPANGEPYPMPHTDEAVVFEDYFWRGLGVPVRPFLRDLLEF
Ga0182161_10991712	3300015351	Miscanthus Phyllosphere	MAPKKGSGNPKKATARASCDNEWVLSLMGEAGINRMVEAGVLPDRVTAGWWPANGEPYPMPHTYEAVVFEDYFSSGLRVPVHPFLRDLLEF*
Ga0182161_11761811	3300015351	Miscanthus Phyllosphere	MAPKRGGGNPKKAAAGASHDKEWVPSLMGKVELKEMVEAGVLPDRVTARWRLANGEPYPMPHTDEVVVFQDYFWRGLGLPVHPFLWDMLEF*
Ga0182159_11575971	3300015355	Miscanthus Phyllosphere	MALKRGAGNPKKTTARASHDNEWVPSLMGEAKINGTVEAGVLLDRVTAGWWPANGEPYPMPHTDKAIVFEDYFWRGIGFPIHLFLRDLLEFWGVSLC
Ga0182159_11752761	3300015355	Miscanthus Phyllosphere	MAPKRGGSNPKKAAARASRDKEWVSSLMGETELNEMVEAGILPDRVIIGWLPADGEPYLMPHTDEVVVFEDYFWCRLGLSVHPFLRGLLEF*
Ga0182159_12424521	3300015355	Miscanthus Phyllosphere	MASKKGVGNPKKASTGVSHDDEWVPSHTGEAERNRMVEAGVLPDRVIAGWWPAYGEPYPMPHTDEAVVFEDYFWRRLGFPVHPFLRDLLEF*
Ga0182145_11434951	3300015361	Miscanthus Phyllosphere	MAPKRGGGNPKKAAARASRDNEWVPSLMAKMELNEMVEAGVLPNHITTGWHPANDEPYPMPHTDELVVFEDYFWHGLGLPVHPFLWDLLEY*
Ga0182145_11942201	3300015361	Miscanthus Phyllosphere	MAPKKGSGNLKKAVAGASRDNEWVPLLMGEAAEINRMVEASVLSNRVTAGWRSANGEPYPMPHTDKAIVFEDYFWCGLGFPIHPFLRDLLEF*
Ga0182203_10318342	3300017404	Miscanthus Phyllosphere	LRKLSSSDPDLRDGTEEGSGNPKKTAAGASHDKEWVPSLMGETELNEMVEACVLPNRVTVGWRPADSEPYSTPHTDELVVFEDYFGHGLGLLVHPFFWGLLEY
Ga0182207_10344993	3300017410	Miscanthus Phyllosphere	MALKRGAGNPKKAAAGASRDNEWVPSNMGEVEINRMVEAGVLSDCVTAGWRPASGGPFLMPHTDEVVAFEDYFWRRLGFPVHPFLRDLLEF
Ga0182208_10767351	3300017411	Miscanthus Phyllosphere	MVPKKGAGNQKKASAEVSHDKEWVPSRMGEVELNRMVEAGVLSDRVTIGWWLASGEPFLMPHTDEAVVFEDFFWHGLGFPIHPFLRDLLEF
Ga0182208_11102091	3300017411	Miscanthus Phyllosphere	MAPKRGVGNPKKVAVETSHDNERVPSLMGEAKINGMVEAGVLPGRVTTGWRPANGEPYPKPHTDEVVVFEDYFWRRLGLPIHPFLRDLLEFWGVSLCNFHP
Ga0182222_10807061	3300017413	Miscanthus Phyllosphere	MAPKKGAGNPKKASAKVRRDEEWVPSCKGEAELNMLVEAGVLLDCVTTGWLLPNGEPYPMPHTDKAVVFEDYFWRELGFPVHPFLRDLLEF
Ga0182222_11052352	3300017413	Miscanthus Phyllosphere	GGNAKKATTDASHDNEWVPSLMGETELNEMVEVGVLPDHVTIGWCPTDGEPYPMPHTDEIVVFEDYFWHGLGLPIHPFLQDLFEYWE
Ga0182202_10124762	3300017415	Miscanthus Phyllosphere	MKKAATRASHDKEWVPSLMGETELNEMVEVGVLPNRVTVGWCPADGEPYPMPHTDELIIFEDYFWHGLGLLVHPFLWDLLEY
Ga0182202_10647942	3300017415	Miscanthus Phyllosphere	MAPKRGVGNPKKAATGASYDNEWVPSLMREVEINGMVEADVLPDRVTAGWQPAYNEPYPMLHTDEAIVFEDYFWCGLGFPIHPFLRDLLEF
Ga0182202_10787971	3300017415	Miscanthus Phyllosphere	MKKAAAEMSRDKEWVPSLMGETELNEMVEAGVLLDRVTVGWRPTNGEPYPMPHTDELVVFEDYFWRGLGLPVHPFLQDLLEYWGVS
Ga0182228_11269132	3300017420	Miscanthus Phyllosphere	MALKKCDVRPKKTTAIASRDEEWVPSRMGVAEINRMVEAGVLPNHVTAGWRSASGEPFLMPHTDEVVVFEDYFWRGLGFLVHPFLRDLLEF
Ga0182219_10847202	3300017424	Miscanthus Phyllosphere	MASKRGVRNPKKVATRASCDNEWVSLLMGEAEINRMVEAGILPDCVTTGWQLANGEPYPMPHTDEAIVFEDYFWRRLGFPIHPYRICWSSRE
Ga0182224_10677412	3300017425	Miscanthus Phyllosphere	MAPKKGGGNPKKAAAGASRDKEWVPSLMGETELNEIVETGVLPDRITAGWRPADGEPYPMPHANELVVFEDYFWHGLGLLVHPFLRDLLAY
Ga0182224_10817831	3300017425	Miscanthus Phyllosphere	MAPKKGMAPKKGSGNTKKAAAGASRDKEWVPSLMGETELNGMVEAGILPDRVTAGWHPADGEPYPMPHIDAVVVFEDYFWHGLELLMHLFLWDLLEYWGVWGY
Ga0182224_11038002	3300017425	Miscanthus Phyllosphere	ANRDNEWVPSLMWEVEINRMVEAGVLLDRVTAGWWPASGEPYLMPHTDEAVVFEDYFWHELGVPIQPFLRDLLEF
Ga0182190_11098531	3300017427	Miscanthus Phyllosphere	SLCAAHPDSHALPPLVPIQIQGMALKRGSGNMKKAAAGMSHDKEWVPSRMGETDLNGMVEAGVLLDCVTAGWRPADGEPYSLPHTDEVVVFEDYFWRGLGLPVHPFLRDLLEY
Ga0182190_11495981	3300017427	Miscanthus Phyllosphere	MAPKRGVGNPKKAAVEASHGNEWVSSLMGEAEINRMVEAGVLPDRVTVGRRPANGEPYPMPHTYEAVVFEDYFSSGLRVPVHPFLRDLLEF
Ga0182192_10633842	3300017430	Miscanthus Phyllosphere	MKRGGGNPKKVATRASHDNEWVPSLMGETELNEMVEAGILPDRITAGWRLADGEPYLMPHTDELIVFEDYFWRGLGLPVHPFLQDLLEFWGV
Ga0182206_11242741	3300017433	Miscanthus Phyllosphere	ANVKKAATGASHDKEWVPSLMGETELNEMVEVGVLPDRVTAGWRPADSEPYPMPHTDEVIVFEDYFWHGLGLLVHPFLWDLLEF
Ga0182191_11096612	3300017438	Miscanthus Phyllosphere	MMLKKGARNLKKAAAGASHNNEWVPLVMGGEEINRMVEAGILPNCVITGWWPASGEPFRMPNTDEAIVFADYFWHGLGFPIHPFLRDLLEF
Ga0182191_11474551	3300017438	Miscanthus Phyllosphere	MAPKKGAGNPKKVSTGVSRDEEWVPSRMGEAELDRSMEAGVLPDRVITGWRLALGEPYPLPHTNEAVVFEDYFWRRLGFPIHLFLSDLLEFWSVSLCNLH
Ga0182191_11547271	3300017438	Miscanthus Phyllosphere	MVPKRGVDNPKKAAARASRDNEWVLSLMGEMEINGMVDAGVLPDRVTAGWRSANGEPYPMPYTDKAVVFKDYFWHRLGFPIHPLLRDLLEFW
Ga0182221_10458252	3300017442	Miscanthus Phyllosphere	MASKKGAGNPKKARARVSHDEEWVPSRTGEAELDRLVEAGVFPNRVTAGWRPAHGEPYPMPHTDEAVVFEDYFWPRLGFPVHPFLMDLLEF
Ga0182193_10551661	3300017443	Miscanthus Phyllosphere	VKKAAAKTSRDKEWVLSLMGEIELNEMVEAGVLLDRVTAGWRPADGEPYPMPHTDELVVFEDYFWHGLGLLVHPFLRDLLEYWVVSLCNLHPNT
Ga0182193_10915661	3300017443	Miscanthus Phyllosphere	MAPKKGDGNPKKVSTGVSRDEEWMPSRMGEVELNRMVEAGVLSDRVTIGWWLASGEPFLMPHTDEAVVFEDFFWHGLGFPIHPFLRDLLEF
Ga0182218_11081671	3300017683	Miscanthus Phyllosphere	MAPKKGAGNPKKVSTGVNRDKEWVPLRKGEVELNRMVEASILPDRITVGWRPASGEPYPMPHTDEVVVFEDYFWRELGFPVHPFLRDLLEFWRVSL
Ga0182225_10202592	3300017684	Miscanthus Phyllosphere	VAARASHDKEWVSSLLGETELNEMVEAGVLPDRVTIRWRPADVEPYSMPHTDEFVVFEDYFWCGLGLLVHPFLRDLLEY
Ga0182225_11017301	3300017684	Miscanthus Phyllosphere	MALQRGGGNTKKVAAGASRDKEWVPSLMGETKLNEMVEAGILPNRITVGWRPTDGEPYPMPHTNEVVVFKDYSWHGLGLLVHLLLWDLLEFWG
Ga0182225_11234031	3300017684	Miscanthus Phyllosphere	MAPKRGVGKPKKATAGASHDNEWVPSLMGEAEINRMVEAGILPDRVTTGWRPASGEPYPMPYTNEVVVFEDYFWHGLGFPIHPFLRDMLEF
Ga0182227_10362702	3300017685	Miscanthus Phyllosphere	MGARNPKKVTAKASHDDEWVPSKMGEAEINKMVEAGVLSDQVTAGWRPANGEPFLMPHTDEVVVFEDYFWRGLGFLVHPFLRDLLEF
Ga0182227_10607591	3300017685	Miscanthus Phyllosphere	MAPKRGSGNTKKAAAGASRDKEWVPSLMGETELNGMVEAGILPDRVTAGWHPADGEPYPMPHIDAVVVFEDYFWHGLELLMHLFLWDLLEYWGVWGY
Ga0182227_11195901	3300017685	Miscanthus Phyllosphere	MAPKRGGGNLKKAAAGVSHDNEWVSSLMGETELNEMVEAGVLPDRVTAGWRPADGEPYLMPHTDELVVLEDYFWHGLGLPIHPFLQDLLEYWGVSLCSL
Ga0182231_11053842	3300017689	Miscanthus Phyllosphere	VPKRGGGNAKKAATGASHDKEWVPSLMGVTELNEMVEAGVLPHRVTSGWRLVDGEPYPMPHTDELVVFEDYFWRGLGLPVHPFLWDLLEY
Ga0182223_10668531	3300017690	Miscanthus Phyllosphere	MAPKRGAGNLKKATAGASHDNEWVPSLMGEAEINRMVEAGILPDRVTTGWRPASGEPYPMPYTNEVVVFEDYFWHGLGFPIHPFLRDMLEF
Ga0207648_115717902	3300026089	Miscanthus Rhizosphere	VNPKKAAAGSSRDKEWVPSLMGEAELNRMVEAGILSDRVTAEWRPASGEPYPMPHTDKVVVFEDYFWHGLGFPIHPFLRDLLEF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071906

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences