Metagenome Family F071845

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F071845
Family Type	Metagenome
Number of Sequences	121
Average Sequence Length	85 residues
Representative Sequence	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Number of Associated Samples	67
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.33 %
% of genes near scaffold ends (potentially truncated)	98.35 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.628 % of family members)
Environment Ontology (ENVO)	Unclassified (80.165 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.57% β-sheet: 1.23% Coil/Unstructured: 64.20%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF04392	ABC_sub_bind	9.09
PF08808	RES	6.61
PF03401	TctC	5.79
PF06282	DUF1036	1.65
PF07366	SnoaL	1.65
PF00106	adh_short	0.83
PF00239	Resolvase	0.83
PF01494	FAD_binding_3	0.83
PF00534	Glycos_transf_1	0.83
PF04055	Radical_SAM	0.83
PF13738	Pyr_redox_3	0.83
PF13439	Glyco_transf_4	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	9.09
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	6.61
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.79
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.65
COG5480	Uncharacterized membrane protein	Function unknown [S]	1.65
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.83
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.83
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.83
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.83
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.33 %
Unclassified	root	N/A	39.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.33 %
Unclassified	root	N/A	39.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.33 %
Unclassified	root	N/A	39.67 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.28 %
Unclassified	root	N/A	39.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42.15 %
Unclassified	root	N/A	39.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.67 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.49 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.61 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.67 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	13.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.67 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	12.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.83 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.67 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	12.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.83 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.67 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	12.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.61 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.83 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.83 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1065562	Not Available	553	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10102348	Not Available	705	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10133507	Not Available	602	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1010013	Not Available	1817	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1027183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1065	Open in IMG/M
3300005332\|Ga0066388_101084827	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300005332\|Ga0066388_106452786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	591	Open in IMG/M
3300005332\|Ga0066388_106647834	Not Available	583	Open in IMG/M
3300005332\|Ga0066388_106697630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300005713\|Ga0066905_100946521	Not Available	756	Open in IMG/M
3300005764\|Ga0066903_105432963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300010048\|Ga0126373_12084560	Not Available	629	Open in IMG/M
3300010358\|Ga0126370_10495055	Not Available	1031	Open in IMG/M
3300010361\|Ga0126378_10589723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300010361\|Ga0126378_12171738	Not Available	633	Open in IMG/M
3300010366\|Ga0126379_10971863	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300010376\|Ga0126381_103752047	Not Available	594	Open in IMG/M
3300010868\|Ga0124844_1004701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2627	Open in IMG/M
3300012202\|Ga0137363_11658288	Not Available	532	Open in IMG/M
3300012971\|Ga0126369_11434670	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300012971\|Ga0126369_12306889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	625	Open in IMG/M
3300012971\|Ga0126369_13483009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	515	Open in IMG/M
3300012971\|Ga0126369_13674219	Not Available	503	Open in IMG/M
3300016270\|Ga0182036_10064624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2360	Open in IMG/M
3300016270\|Ga0182036_11395145	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300016294\|Ga0182041_10015300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4532	Open in IMG/M
3300016294\|Ga0182041_10263885	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300016294\|Ga0182041_10600702	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300016294\|Ga0182041_11689802	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300016319\|Ga0182033_10609795	Not Available	949	Open in IMG/M
3300016319\|Ga0182033_10629058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300016341\|Ga0182035_10814387	Not Available	820	Open in IMG/M
3300016341\|Ga0182035_12027572	Not Available	523	Open in IMG/M
3300016357\|Ga0182032_10432198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1071	Open in IMG/M
3300016371\|Ga0182034_10208435	Not Available	1516	Open in IMG/M
3300016371\|Ga0182034_11074920	Not Available	697	Open in IMG/M
3300016387\|Ga0182040_10033092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3050	Open in IMG/M
3300016404\|Ga0182037_10319133	Not Available	1255	Open in IMG/M
3300016404\|Ga0182037_10390738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1144	Open in IMG/M
3300016422\|Ga0182039_10199886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300016422\|Ga0182039_10368784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300016445\|Ga0182038_10194548	Not Available	1590	Open in IMG/M
3300021372\|Ga0213877_10319051	Not Available	530	Open in IMG/M
3300031545\|Ga0318541_10106081	Not Available	1513	Open in IMG/M
3300031561\|Ga0318528_10277465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300031564\|Ga0318573_10673310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	556	Open in IMG/M
3300031573\|Ga0310915_10033444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3229	Open in IMG/M
3300031573\|Ga0310915_10539005	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300031679\|Ga0318561_10024420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2851	Open in IMG/M
3300031719\|Ga0306917_10135553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1811	Open in IMG/M
3300031724\|Ga0318500_10057201	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300031744\|Ga0306918_10007596	All Organisms → cellular organisms → Bacteria	5940	Open in IMG/M
3300031744\|Ga0306918_10235957	Not Available	1391	Open in IMG/M
3300031751\|Ga0318494_10851715	Not Available	534	Open in IMG/M
3300031768\|Ga0318509_10567771	Not Available	632	Open in IMG/M
3300031770\|Ga0318521_10375968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300031770\|Ga0318521_10612070	Not Available	659	Open in IMG/M
3300031771\|Ga0318546_10749136	Not Available	687	Open in IMG/M
3300031781\|Ga0318547_10076224	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300031781\|Ga0318547_10312686	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300031796\|Ga0318576_10025041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2417	Open in IMG/M
3300031796\|Ga0318576_10130017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1167	Open in IMG/M
3300031798\|Ga0318523_10471748	Not Available	622	Open in IMG/M
3300031805\|Ga0318497_10823924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	520	Open in IMG/M
3300031819\|Ga0318568_10397135	Not Available	859	Open in IMG/M
3300031833\|Ga0310917_10005202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6773	Open in IMG/M
3300031833\|Ga0310917_10588994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	755	Open in IMG/M
3300031879\|Ga0306919_10107246	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300031880\|Ga0318544_10034779	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300031880\|Ga0318544_10202882	Not Available	765	Open in IMG/M
3300031890\|Ga0306925_10227572	All Organisms → cellular organisms → Bacteria	2011	Open in IMG/M
3300031890\|Ga0306925_10781388	Not Available	992	Open in IMG/M
3300031897\|Ga0318520_10153862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1335	Open in IMG/M
3300031897\|Ga0318520_10773153	Not Available	602	Open in IMG/M
3300031897\|Ga0318520_11088551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	506	Open in IMG/M
3300031910\|Ga0306923_10053834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4448	Open in IMG/M
3300031910\|Ga0306923_10106868	All Organisms → cellular organisms → Bacteria	3163	Open in IMG/M
3300031910\|Ga0306923_10205069	Not Available	2254	Open in IMG/M
3300031910\|Ga0306923_11479740	Not Available	711	Open in IMG/M
3300031910\|Ga0306923_12367938	Not Available	527	Open in IMG/M
3300031912\|Ga0306921_10233150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2156	Open in IMG/M
3300031912\|Ga0306921_10613806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1257	Open in IMG/M
3300031941\|Ga0310912_10462179	Not Available	989	Open in IMG/M
3300031941\|Ga0310912_10764030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	748	Open in IMG/M
3300031941\|Ga0310912_10999645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	641	Open in IMG/M
3300031941\|Ga0310912_11038895	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300031942\|Ga0310916_10156624	All Organisms → cellular organisms → Bacteria → Proteobacteria	1883	Open in IMG/M
3300031945\|Ga0310913_10122572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1776	Open in IMG/M
3300031947\|Ga0310909_10023007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4517	Open in IMG/M
3300031947\|Ga0310909_10575810	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300031947\|Ga0310909_11638665	Not Available	509	Open in IMG/M
3300031954\|Ga0306926_10306459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1965	Open in IMG/M
3300031954\|Ga0306926_10619293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1320	Open in IMG/M
3300031981\|Ga0318531_10260182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	783	Open in IMG/M
3300031981\|Ga0318531_10380985	Not Available	638	Open in IMG/M
3300032001\|Ga0306922_10182751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2248	Open in IMG/M
3300032001\|Ga0306922_10666544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	1097	Open in IMG/M
3300032001\|Ga0306922_11184808	Not Available	778	Open in IMG/M
3300032051\|Ga0318532_10359555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	517	Open in IMG/M
3300032052\|Ga0318506_10164589	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300032052\|Ga0318506_10545453	Not Available	513	Open in IMG/M
3300032059\|Ga0318533_10004356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7938	Open in IMG/M
3300032059\|Ga0318533_10083475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2184	Open in IMG/M
3300032059\|Ga0318533_11432661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300032060\|Ga0318505_10387834	Not Available	660	Open in IMG/M
3300032066\|Ga0318514_10360592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	770	Open in IMG/M
3300032076\|Ga0306924_10432630	Not Available	1504	Open in IMG/M
3300032089\|Ga0318525_10546545	Not Available	592	Open in IMG/M
3300032090\|Ga0318518_10442069	Not Available	666	Open in IMG/M
3300032090\|Ga0318518_10655984	Not Available	534	Open in IMG/M
3300032261\|Ga0306920_100323867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2295	Open in IMG/M
3300032261\|Ga0306920_100377143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2110	Open in IMG/M
3300032261\|Ga0306920_100792993	Not Available	1391	Open in IMG/M
3300032261\|Ga0306920_101592249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300032261\|Ga0306920_103854217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	547	Open in IMG/M
3300033289\|Ga0310914_10037242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3930	Open in IMG/M
3300033289\|Ga0310914_10360356	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300033289\|Ga0310914_10555034	Not Available	1037	Open in IMG/M
3300033289\|Ga0310914_10939580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	764	Open in IMG/M
3300033289\|Ga0310914_11426634	Not Available	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.21%
Loam	Environmental → Terrestrial → Soil → Loam	5.79%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	84.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.83%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10655621	3300000580	Forest Soil	MTAVPRAKANEAHASEAETEDWPWRLRKWIVKKGISIMCPNSSLSTNVATDIPLLRAGMRLAYLKALAALGISNFVARS
AF_2010_repII_A1DRAFT_101023481	3300000597	Forest Soil	MTAVPRAKANGAHASEAETENRPWRLRKWIVKKGISIMSPNSSLSTDVAADIPLFRAGMRLAYLKALAALGI
AF_2010_repII_A1DRAFT_101335071	3300000597	Forest Soil	MTAVPRAKADGAQASEAETENGLWRLRKWIVKKGISIMCPNSSPLSTNVATDIPLFRASMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAA
AF_2010_repII_A100DRAFT_10100134	3300000655	Forest Soil	MTAVPRAKANGAHASEAETENRPWRLRKWIVKKGISIMYPNSSLSTDVAADIPLFRAGMRLAYLKALA
AF_2010_repII_A100DRAFT_10271831	3300000655	Forest Soil	MTAVPRAKGNEAHASEAETEXWPWRLRKWIVKKGISIMCPNSSLSTNVAXDIPLFRXGMRLAYLKALAALGISNFVARSGLGYNFVCHVGD
Ga0066388_1010848271	3300005332	Tropical Forest Soil	MTAVPRAKANETHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVA
Ga0066388_1064527862	3300005332	Tropical Forest Soil	MTAVPRAKANEDTRREAETENWSWRLRKWIVKKGISIMCPDSSPLSTNVAADIPLFRAGMRLAYLKALAALGISNFVAHSGLGYNFVC
Ga0066388_1066478342	3300005332	Tropical Forest Soil	MTAVPRAKANEAHASEAETEDWPWRLRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLKALAALGISNFVA
Ga0066388_1066976302	3300005332	Tropical Forest Soil	MTAVPPAKANGAHASEAETEPWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRFAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGA
Ga0066905_1009465212	3300005713	Tropical Forest Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIVRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNF
Ga0066903_1054329632	3300005764	Tropical Forest Soil	MTALPRAKANEAHASEAETENWSRRLREWIVKKGISIMCPDSSPLSTNVAADIPLFRAGMRLAYLKALAALGISNFVAHSGL
Ga0126373_120845601	3300010048	Tropical Forest Soil	MTAVPRAKANETHVSEAETENWPWQLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFV
Ga0126370_104950552	3300010358	Tropical Forest Soil	MTAVPPAKANGAHASEAETEPWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRFAYLKALAALGISNFGNHASLA*
Ga0126378_105897231	3300010361	Tropical Forest Soil	MPYKGTPNMTALPRAKANEANASEAETENWSWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLTYLKA
Ga0126378_121717381	3300010361	Tropical Forest Soil	MTAVPRAKANEAHASEAETENWPRRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVA
Ga0126379_109718632	3300010366	Tropical Forest Soil	MTAVPRAKANEAHVSEAETENWPWRLRNWIVKKGILIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALG
Ga0126381_1037520471	3300010376	Tropical Forest Soil	MTAVPRAKANGAHASEAETENRPWRLRKWIVKKGISIMYPNSSLSTDVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVC
Ga0124844_10047015	3300010868	Tropical Forest Soil	MPYEETPNMTAVRRAKANEAHASKTETENWSWRLRKWIVKKGISIMCPNSSPLSTNVAADIPLFRGGMRLAYLKALAALGISNFVAHSGLGYNFVCHVGDLAAFPF
Ga0137363_116582881	3300012202	Vadose Zone Soil	MTAVPRAKANGAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAAL
Ga0126369_114346701	3300012971	Tropical Forest Soil	MTAVPRAKANETHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALG
Ga0126369_123068891	3300012971	Tropical Forest Soil	MTAVPRAKGNEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCH
Ga0126369_134830091	3300012971	Tropical Forest Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKALAALGVSNFVARSGLGYNFVCH
Ga0126369_136742191	3300012971	Tropical Forest Soil	MTALPHAKADGAHASEAETKPWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCH
Ga0182036_100646244	3300016270	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPG
Ga0182036_113951451	3300016270	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Ga0182041_100153008	3300016294	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLA
Ga0182041_102638851	3300016294	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKALAALGISNFVAHSGLGYNFV
Ga0182041_106007021	3300016294	Soil	MTAVPRAKANETHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGIS
Ga0182041_116898021	3300016294	Soil	MTVATRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Ga0182033_106097952	3300016319	Soil	MTAVPRAKANEAHASEAETEDWPWRPRKWIVKKGISIMCPNSSISTNVAIDIPLFRAGMRLAYLKALAALGISNFVA
Ga0182033_106290582	3300016319	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGD
Ga0182035_108143871	3300016341	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRASVRLAYLKALAALGISNFVARSGLGYNFVCH
Ga0182035_120275722	3300016341	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVAR
Ga0182032_104321981	3300016357	Soil	MTAVPRAKANEAHASESETEDWPWRPRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGVRLAYLKTLAALGISNFVARSGLGYNFVCHVGD
Ga0182034_102084351	3300016371	Soil	MTAVPRAKANEAHASEAETEDWPWRLRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLKALAALGISNFVAR
Ga0182034_110749202	3300016371	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Ga0182040_100330924	3300016387	Soil	MTAVPRAKANEAHASEAETENWPWRQKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRAELE
Ga0182037_103191331	3300016404	Soil	MTAVPRAKANEAHASEAETEDWPWRPRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLKALAALGISNFVARS
Ga0182037_103907381	3300016404	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAALGVSNFVARSGLGYNFVCHVGDLAAFPFYH
Ga0182039_101998862	3300016422	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAALGVSNFVARSGLGYNFVCHVGDLAAFPFYHP
Ga0182039_103687841	3300016422	Soil	MTAAPRAKANEAQASEAETENWSWRLRKWIVKKGISIMCPDSSPLSTNVAADIPLFRAGMRLAYLKALAALGISNFVAHSGLGYNFVCH
Ga0182038_101945481	3300016445	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Ga0213877_103190511	3300021372	Bulk Soil	MTVVPRAKSNGAYASEAETENWSWRLRTWIVKKGISIMCPNSSPLSTNVAADIPLFRGGMRLAYLKALAALGINNFVAHSGLGYNFVCHVGDL
Ga0318541_101060811	3300031545	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYSFVCHVGDLAA
Ga0318528_102774652	3300031561	Soil	MTAAPRAKANEAQASEAETENWSWRLRKWIVKKGISIMCPDSSPLSTNVAADIPLFRAGMRLAYLKALAALGISN
Ga0318573_106733101	3300031564	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAA
Ga0310915_100334441	3300031573	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLVRGGMRLAYLYALAALGISNFVARSGLGYNFVCHVGDLAAFPF
Ga0310915_105390052	3300031573	Soil	MTAVPRAKANETHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVAR
Ga0318561_100244206	3300031679	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAY
Ga0306917_101355531	3300031719	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYN
Ga0318500_100572013	3300031724	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGIS
Ga0306918_100075961	3300031744	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFV
Ga0306918_102359571	3300031744	Soil	MTAVPRAKANEAHASEAETENGPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVAR
Ga0318494_108517152	3300031751	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLVRGGMRLAYLKALAALGISNFVARSGLGY
Ga0318509_105677712	3300031768	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLG
Ga0318521_103759682	3300031770	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVTALAALGIS
Ga0318521_106120701	3300031770	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARS
Ga0318546_107491361	3300031771	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAALGVSNFVARSGLGYN
Ga0318498_104492961	3300031778	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLK
Ga0318547_100762244	3300031781	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYSFV
Ga0318547_103126861	3300031781	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGISNF
Ga0318576_100250411	3300031796	Soil	MTAAPRAKANEAQASEAETENWSWRLRKWIVKKGISIMCPDSSPLSTNVAADIPLFRAGMRLAYLKALAALGISNFVAHSGLGYNFVCHAGDLAA
Ga0318576_101300172	3300031796	Soil	MTAVPRAKANEAHASEAETENGPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYH
Ga0318523_104717481	3300031798	Soil	MTAVPHAKANGAHASEAETEDWPWRPRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLK
Ga0318497_108239241	3300031805	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAALGVSNFVARSGLGYNFVCHVGDLAAFP
Ga0318568_103971353	3300031819	Soil	MTAVPHAKGNGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLEALAALG
Ga0310917_100052021	3300031833	Soil	MTAVPRAKANEAHASEAETENGPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNF
Ga0310917_105889941	3300031833	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCH
Ga0306919_101072465	3300031879	Soil	MTAVPRAKANEAHASEAETENWPWRQKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGL
Ga0318544_100347793	3300031880	Soil	MTAVPRAKANEIHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARS
Ga0318544_102028821	3300031880	Soil	MTAMPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARS
Ga0306925_102275725	3300031890	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLG
Ga0306925_107813881	3300031890	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNLSRAADL
Ga0318520_101538621	3300031897	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRA
Ga0318520_107731531	3300031897	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAA
Ga0318520_110885511	3300031897	Soil	MTAVPRAKANGAYASEAETENWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRA
Ga0306923_100538341	3300031910	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHP
Ga0306923_101068684	3300031910	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLVRGGMRLAYLYALAA
Ga0306923_102050691	3300031910	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAALGVSNFVARSGLGY
Ga0306923_114797401	3300031910	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLG
Ga0306923_123679381	3300031910	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKTLAALGISNFVARSGLGY
Ga0306921_102331505	3300031912	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRA
Ga0306921_106138061	3300031912	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHLGAYRAELE
Ga0310912_104621792	3300031941	Soil	MTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSANVAADIPLFRGGMRLAYLKALAA
Ga0310912_107640302	3300031941	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFP
Ga0310912_109996451	3300031941	Soil	MTSVPRAKANEAHASEAETENWPSRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYSFVCHVGDLAAF
Ga0310912_110388951	3300031941	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLG
Ga0310916_101566243	3300031942	Soil	MTAMPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLG
Ga0310913_101225721	3300031945	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGA
Ga0310909_100230078	3300031947	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVC
Ga0310909_105758101	3300031947	Soil	MTAVPRAKANETHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAAL
Ga0310909_116386651	3300031947	Soil	MTAVPRAKANEAHASEAETEDWPWRLRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFV
Ga0306926_103064591	3300031954	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLVRGGMRLAYLYALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRAEL
Ga0306926_106192932	3300031954	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFY
Ga0318531_102601821	3300031981	Soil	MTAVPRAKANGAYASEAETENWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLEALAALGISNFVARSGLGYNFVCHVGDLAAFP
Ga0318531_103809852	3300031981	Soil	MTAVPHAKGNGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLG
Ga0306922_101827511	3300032001	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAYRA
Ga0306922_106665441	3300032001	Soil	MTAVSRVKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTDVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYHPGAY
Ga0306922_111848081	3300032001	Soil	MTAVPRAKANGAYASEAETENWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLEALAALGISNFVARSGLGYN
Ga0318532_103595551	3300032051	Soil	MTAVPRAKANEAHASEAETENWPWRQKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCH
Ga0318506_101645891	3300032052	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGI
Ga0318506_105454531	3300032052	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFV
Ga0318533_1000435612	3300032059	Soil	MTAVPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLVRGGMRLAYLYALAALGISNFVARSGLGYNFVCHVGDLAAFPFY
Ga0318533_100834751	3300032059	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLG
Ga0318533_114326611	3300032059	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFYH
Ga0318505_103878341	3300032060	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGY
Ga0318514_103605921	3300032066	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSGLGYNFVCHVGDLAAFPFY
Ga0306924_104326301	3300032076	Soil	MTGTSNMTAVPRAKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLK
Ga0318525_105465451	3300032089	Soil	MTAMPRAKASEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNFVARSG
Ga0318518_104420691	3300032090	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNF
Ga0318518_106559841	3300032090	Soil	MTAVPRAKANEIHVSEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRGGMRLAYLKALAALGISNF
Ga0306920_1003238671	3300032261	Soil	MTAVPHAKANGAHASEAETEPWPWRLRKWIVKKGISIMRPDSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGL
Ga0306920_1003771435	3300032261	Soil	MTVVPRAKANGAHASEAETEHWPWRLRKWIVKKGISFMSPNSSLSTDVAADIPLFRAGVRLAYLKTLAALGISNFVARSGLGYNFVCHVGDLAAF
Ga0306920_1007929933	3300032261	Soil	MTAVPRAKANEAPASEAETENWSWRLRQWIVKKGISIMCPDSSPLSTDVAADIPLFRAGMRLAYLKALAALGISNFVAH
Ga0306920_1015922492	3300032261	Soil	MTAVPRAKANGAYASEAETENWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLEALAALGISNFVARSGLGYNF
Ga0306920_1038542171	3300032261	Soil	MTAVSRVKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTDVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHV
Ga0310914_100372421	3300033289	Soil	MTAVPHAKANEAHASEAETELWPWQLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYVKALAALGISNFVARSGLGYNFVCHVGDLAAFPFY
Ga0310914_103603562	3300033289	Soil	MTVAPRAKANEAQASEAETENWPWRLRKWIVKKGISIMCPDSSLSTNVAADIPLFRGGMRLAYLKAL
Ga0310914_105550341	3300033289	Soil	MTAVPRAKANEAHASEAETEDWPWRPRKWIVKKGISIMCPNSSLSTNVATDIPLFRAGMRLAYLKALAALGISNF
Ga0310914_109395801	3300033289	Soil	MTAVSRVKANEAHASEAETENWPWRLRKWIVKKGISIMCPNSSLSTNVAADIPLFRAGMRLAYLKALAALGISNFVARSGLGYNFVCHVGD
Ga0310914_114266342	3300033289	Soil	MTAVPRAKANGAYASEAETENWPWRLRKWIVKKGISIMRPNSSLSTNVAADIPLFRAGMRLAYLKALAALGIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071845

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences