Metagenome Family F071778

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071778
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	74 residues
Representative Sequence	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAMLFALVVNIPWPRRKKDDRD
Number of Associated Samples	80
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.33 %
% of genes near scaffold ends (potentially truncated)	26.23 %
% of genes from short scaffolds (< 2000 bps)	83.61 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.902 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (18.852 % of family members)
Environment Ontology (ENVO)	Unclassified (42.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.213 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.58% β-sheet: 0.00% Coil/Unstructured: 65.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00211	Guanylate_cyc	3.28
PF03976	PPK2	2.46
PF00027	cNMP_binding	2.46
PF00903	Glyoxalase	1.64
PF00805	Pentapeptide	1.64
PF00871	Acetate_kinase	1.64
PF04355	SmpA_OmlA	1.64
PF00884	Sulfatase	1.64
PF03641	Lysine_decarbox	0.82
PF12697	Abhydrolase_6	0.82
PF13290	CHB_HEX_C_1	0.82
PF04914	DltD	0.82
PF12836	HHH_3	0.82
PF01293	PEPCK_ATP	0.82
PF13884	Peptidase_S74	0.82
PF13650	Asp_protease_2	0.82
PF13668	Ferritin_2	0.82
PF03372	Exo_endo_phos	0.82
PF13578	Methyltransf_24	0.82
PF01925	TauE	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.28
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	2.46
COG0282	Acetate kinase	Energy production and conversion [C]	1.64
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.64
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	1.64
COG3426	Butyrate kinase	Energy production and conversion [C]	1.64
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.82
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.82
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	0.82
COG3966	Poly-D-alanine transfer protein DltD, involved in esterification of teichoic acids	Cell wall/membrane/envelope biogenesis [M]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.72 %
Unclassified	root	N/A	3.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.90 %
Unclassified	root	N/A	3.28 %
Viruses	superkingdom	All Organisms → Viruses	0.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.90 %
Unclassified	root	N/A	3.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	69.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.10 %
Unclassified	root	N/A	3.28 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	69.67 %
Unclassified	root	N/A	3.28 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.64 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	61.48 %
Unclassified	root	N/A	3.28 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.66 %
Unclassified	root	N/A	3.28 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	0.82 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.66 %
Unclassified	root	N/A	3.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.82 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.66 %
Unclassified	root	N/A	3.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.82 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.66 %
Unclassified	root	N/A	3.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.64 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.82 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.82 %
Verrucomicrobia bacterium 13_2_20CM_55_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	0.82 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16871142	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101133988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300000890\|JGI11643J12802_11258154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300000956\|JGI10216J12902_105299578	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300000956\|JGI10216J12902_120888727	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3126	Open in IMG/M
3300001431\|F14TB_100026286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300002899\|JGIcombinedJ43975_10002332	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300004114\|Ga0062593_102976593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300005166\|Ga0066674_10015778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3202	Open in IMG/M
3300005181\|Ga0066678_10120096	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300005332\|Ga0066388_100352388	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
3300005332\|Ga0066388_100714682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1607	Open in IMG/M
3300005332\|Ga0066388_100858692	All Organisms → cellular organisms → Bacteria → Proteobacteria	1492	Open in IMG/M
3300005332\|Ga0066388_101322804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1244	Open in IMG/M
3300005332\|Ga0066388_102232547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	989	Open in IMG/M
3300005332\|Ga0066388_103130810	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300005332\|Ga0066388_103729624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300005332\|Ga0066388_104477006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300005332\|Ga0066388_108287032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300005332\|Ga0066388_108689575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005347\|Ga0070668_101045409	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005353\|Ga0070669_101075073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300005436\|Ga0070713_101044419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300005445\|Ga0070708_101868918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300005467\|Ga0070706_101277305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300005518\|Ga0070699_101923270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300005552\|Ga0066701_10702057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300005553\|Ga0066695_10020024	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3717	Open in IMG/M
3300005557\|Ga0066704_10215401	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005576\|Ga0066708_10046875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2404	Open in IMG/M
3300005713\|Ga0066905_100179578	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300005764\|Ga0066903_100250004	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300005764\|Ga0066903_100336074	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300005764\|Ga0066903_100596568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1912	Open in IMG/M
3300005764\|Ga0066903_100858015	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300005764\|Ga0066903_100961703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1555	Open in IMG/M
3300005764\|Ga0066903_102980332	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005764\|Ga0066903_103728158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_2_20CM_55_10	819	Open in IMG/M
3300005764\|Ga0066903_104353906	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300005764\|Ga0066903_106193653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300005764\|Ga0066903_108152192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300006871\|Ga0075434_102125664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300009792\|Ga0126374_10977495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300009792\|Ga0126374_11105918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300009792\|Ga0126374_11559872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300010046\|Ga0126384_10298147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1324	Open in IMG/M
3300010046\|Ga0126384_10616339	Not Available	952	Open in IMG/M
3300010048\|Ga0126373_10336305	All Organisms → Viruses → Predicted Viral	1518	Open in IMG/M
3300010048\|Ga0126373_10608498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1146	Open in IMG/M
3300010358\|Ga0126370_11526779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300010359\|Ga0126376_12144830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300010360\|Ga0126372_10456261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1186	Open in IMG/M
3300010366\|Ga0126379_10350268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1507	Open in IMG/M
3300010366\|Ga0126379_10359454	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300010376\|Ga0126381_100010431	All Organisms → cellular organisms → Bacteria	10458	Open in IMG/M
3300010376\|Ga0126381_101455430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	990	Open in IMG/M
3300010376\|Ga0126381_102030529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	828	Open in IMG/M
3300010376\|Ga0126381_103001577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300010398\|Ga0126383_10071611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	2984	Open in IMG/M
3300012202\|Ga0137363_10026395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3964	Open in IMG/M
3300012203\|Ga0137399_11008454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300012208\|Ga0137376_11535346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300012582\|Ga0137358_10151160	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300012918\|Ga0137396_10353886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1087	Open in IMG/M
3300012918\|Ga0137396_10359288	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300012925\|Ga0137419_10050743	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300012971\|Ga0126369_11895266	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012971\|Ga0126369_13175947	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300012971\|Ga0126369_13415092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300014969\|Ga0157376_10987657	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300015241\|Ga0137418_10041226	All Organisms → cellular organisms → Bacteria	4257	Open in IMG/M
3300015371\|Ga0132258_11289725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1846	Open in IMG/M
3300015374\|Ga0132255_104138418	Not Available	615	Open in IMG/M
3300016319\|Ga0182033_10289886	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300016387\|Ga0182040_10173710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1560	Open in IMG/M
3300016422\|Ga0182039_11261911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	669	Open in IMG/M
3300016445\|Ga0182038_10187023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1618	Open in IMG/M
3300018431\|Ga0066655_10120226	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1508	Open in IMG/M
3300019886\|Ga0193727_1073675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1049	Open in IMG/M
3300021560\|Ga0126371_10102707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2851	Open in IMG/M
3300021560\|Ga0126371_10574199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1277	Open in IMG/M
3300021560\|Ga0126371_13290788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300025905\|Ga0207685_10470349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300025910\|Ga0207684_10524854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300025923\|Ga0207681_10958107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300025926\|Ga0207659_10166369	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300025972\|Ga0207668_11620795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300026490\|Ga0257153_1077648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300027071\|Ga0209214_1040642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300031231\|Ga0170824_110960667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300031469\|Ga0170819_10217563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300031572\|Ga0318515_10494649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300031573\|Ga0310915_10859904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300031716\|Ga0310813_11522571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300031719\|Ga0306917_10594145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	870	Open in IMG/M
3300031720\|Ga0307469_10932631	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031744\|Ga0306918_10332483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300031744\|Ga0306918_10614678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300031744\|Ga0306918_10831536	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300031820\|Ga0307473_10489542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300031879\|Ga0306919_10349946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1128	Open in IMG/M
3300031879\|Ga0306919_10512144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	925	Open in IMG/M
3300031890\|Ga0306925_10250393	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300031890\|Ga0306925_10462060	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031890\|Ga0306925_10871154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	929	Open in IMG/M
3300031912\|Ga0306921_10097928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3396	Open in IMG/M
3300031912\|Ga0306921_11106459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300031912\|Ga0306921_12330123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300031942\|Ga0310916_10410093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300031945\|Ga0310913_11240626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300031946\|Ga0310910_10993267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300031947\|Ga0310909_11076059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300031954\|Ga0306926_11343767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300032001\|Ga0306922_11875683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300032076\|Ga0306924_10238434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2089	Open in IMG/M
3300032180\|Ga0307471_100128045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2385	Open in IMG/M
3300032180\|Ga0307471_101548902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300032180\|Ga0307471_101697348	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300032205\|Ga0307472_101797217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300033412\|Ga0310810_11400290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.62%
Host-Associated	Host-Associated	7.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.62%
Plants	Host-Associated → Plants	7.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.85%
Loam	Environmental → Terrestrial → Soil → Loam	23.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	18.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.02%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03057610	2088090014	Soil	LNDAEQLKRTLLAIIFAVLLSLMFAPHSGSGRSLLPFAHGPFFIMPSYVDGRQLVLQTIFIAVLFALIVNIPWQRQKKDDRD
INPhiseqgaiiFebDRAFT_1011339882	3300000364	Soil	VIESLARHTAMRTVLAVNIALLISLMFAPHSGRGLFRFMGYAHGPFFIQPRHVDWKQLVLQTIVIAIAAAVTVNLIPRRPKP*
JGI11643J12802_112581541	3300000890	Soil	FAVLPSLMFAPHSGRGLLRFSGYANGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIKWRRRKEGD
JGI10216J12902_1052995781	3300000956	Soil	MRRTLLAVIFAVLISLMFAPHTGRGLVQFANYAHGPFFIMPSHVDGKQLVLQTVIIAVLFALIVNIPWQRKKKRE*
JGI10216J12902_1208887273	3300000956	Soil	MLDGETHTSSHFFAVLLSLMFAPHSGRGLLRFSGYAHGPFFIMPSYIDGKQLVLQTIFIAVPFALIVNIPWRRRKEGDRD*
F14TB_1000262862	3300001431	Soil	LKRTLLAIIFAVLLSLIFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAMLFALVVNIPWPRRKKDDRD*
JGIcombinedJ43975_100023325	3300002899	Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAMLFALVVNIPWPRRKKDDRD*
Ga0062593_1029765931	3300004114	Soil	MSRTLLAISVAVLISLMLAPHTGRGALRFVNYAHGPFFIMPSEIDRKQLVLQTVFLAVAAAVIVNLFPRRPRT*
Ga0066674_100157785	3300005166	Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD*
Ga0066678_101200961	3300005181	Soil	LLSLMFAPHSGSGRSLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD*
Ga0066388_1003523882	3300005332	Tropical Forest Soil	MKRTLAAIIIALFISLMFAPHTGRGLVEFANYAHGPFFIMPHRVDGKQLVLQTLILGVLFVVIANTPWKKKGE*
Ga0066388_1007146822	3300005332	Tropical Forest Soil	MMNRTLLAISIAVLISLMFAPHTGRGMLRFANYAHGPFFITPSQVDRKQLVLQTIIIAVAAAVIANLLPRKK*
Ga0066388_1008586921	3300005332	Tropical Forest Soil	MKRTVLAIIIAILISLMLAPHSGRGLVEFANYAHGPFFIMPNRVDGKQLVIQTVIVAMLFALIVNIPWKGKRG*
Ga0066388_1013228041	3300005332	Tropical Forest Soil	MNRTLLAISIAVLISLMFAPHTGRGALRFANYAHGPFFIMPGQVDRKQLVLQTIIIAVAAAVIVNLFPRKE*
Ga0066388_1022325472	3300005332	Tropical Forest Soil	MLSLMFAPHSGRGLLRFMGYAHGPFFIQSSHVDRKQLVLQTIVIVLLFALIVNIPWRRKNR*
Ga0066388_1031308101	3300005332	Tropical Forest Soil	SMLDGETHTSSHYFRRPALADVCPHSGRGLLQFSGYTHGPFFIMPSEVDRQQLVLETIFITLLFALIVNIPWWRRKKDDRD*
Ga0066388_1037296241	3300005332	Tropical Forest Soil	MLSLMLAPHSGRGLLRFAGYAHGPFFIMPSYIDGNQLVLQTIFIAVVFALIVNIPWRRRKKNDRD*
Ga0066388_1044770062	3300005332	Tropical Forest Soil	MLRHRMERTLLAIFFAVILSLMFAPHTGRGLLPFMGYAHGPFFIHPSYVDRKQLVLQTIVIAVAAAVIVNLFPRSQRK*
Ga0066388_1082870322	3300005332	Tropical Forest Soil	LLAIFFAVMLSLMFAPHSGRGLFRFAGYAHGPFFTMPSYIDGKQLVLQTIFIAVVFALIVNIPWRRRKKGDRD*
Ga0066388_1086895751	3300005332	Tropical Forest Soil	MERTLLAVLAAVLISLMFAPHTGRGLLRFANYAHGPFFIAPSHVDRKQLVLQTIIIAAAAVVIVNLSPRRPRN*
Ga0070668_1010454092	3300005347	Switchgrass Rhizosphere	AVMFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE*
Ga0070669_1010750731	3300005353	Switchgrass Rhizosphere	LQRTLLAIFFAVMFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE*
Ga0070713_1010444191	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLAFAPHSGRGLLPFAGYAHGPFFIMPSYVARRQLLLQTIFIAVLFALVVNIPWSRWKKDDTD*
Ga0070708_1018689181	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNIPWPRRKKDDRD*
Ga0070706_1012773052	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MANDRIRCHRQLKRTLLAIIFAVVLSLMFAPHSGSGRSLLRFTGYAHGPFFIMPSHVDGRQLVLQTIFIAVLFALVVNIPWPRRKKDDRD*
Ga0070699_1019232702	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLSLMFAPHSGRGLFRFAGYAHGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIPWRRRKKSDRD*
Ga0066701_107020571	3300005552	Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD*
Ga0066695_100200242	3300005553	Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRCLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD*
Ga0066704_102154012	3300005557	Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRSLVRFAGYAHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD*
Ga0066708_100468753	3300005576	Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLILQTIFIAVLFALVVNTPWPRRKKDDRD*
Ga0066905_1001795783	3300005713	Tropical Forest Soil	MMIEFRRWERTLLAIFFAVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVLFALIVNIPWRRKKDGRD*
Ga0066903_1002500042	3300005764	Tropical Forest Soil	LKRTLLAITIAVLISLMFAPHRGRGLLRFAGYAHGPFFIMPSEIDGKQLVLQTIFIAVVVALIVNILSWRRRKNGRDGQDEVT*
Ga0066903_1003360744	3300005764	Tropical Forest Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRSANYAQGPFFITPSQVDRKQLVLQTIIIAIAAVVIVNLFPRRTKK*
Ga0066903_1005965681	3300005764	Tropical Forest Soil	MMIEFRRWERTLLAICFAVILSLMFAPHSGRGLFRFAGYARGPFFIMPGHVDGKQLVLQTIFVAVLFALIVNIPWRRKKDDRG*
Ga0066903_1008580153	3300005764	Tropical Forest Soil	MMIEFRRWERTLFAIFFAVIVSLMFAPHSGRGLLRFAGYAHGPFFITPSHVDGKQLILQTIVIAAVFALIVNIPWRRKKDNRD*
Ga0066903_1009617032	3300005764	Tropical Forest Soil	VIQCSTVKRTLLAIIFAVLLSLMFAPHSGRGLLQFSGYAHGPFFIMPSEVDRQQLVLETIFLTLLFALIVNIPSRRRKKDDRD*
Ga0066903_1029803322	3300005764	Tropical Forest Soil	MLSLMFAPHSGRGLFRFAGYAHGPFFIMPSYIDGKQLLLQTIFLAVLFAVVVNLFPRKLKK*
Ga0066903_1037281582	3300005764	Tropical Forest Soil	VMLSLMLAPHSGSGRGLFRFSGYARGPFFIMPSYIDGKQLVLQTIFIAAVFALIVNIPWRRQKKDYRD*
Ga0066903_1043539062	3300005764	Tropical Forest Soil	TLLAIFFAVILSLMFAPHSGRGLLRFAGYAHAPFFIMPSHIDGKQLVLQTIFLAVLFALIVNIPWRRKKDGRD*
Ga0066903_1061936532	3300005764	Tropical Forest Soil	MLSLMLAPHSGRGLFRFANYAHGPFFIQPGYVDWKQLVLQTIVIAVAAAVIVNLFPRRPRN*
Ga0066903_1081521922	3300005764	Tropical Forest Soil	RTLLAICFAVILSLMFAPHSGRGLFRFAGYARGPFFIMPDHVEGKQLVLQTIFVAVLFALIVNIPWRLKKDDRD*
Ga0075434_1021256641	3300006871	Populus Rhizosphere	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNIPWPRRKKDDTDQPRLRNSPAQRS
Ga0126374_109774951	3300009792	Tropical Forest Soil	SLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQFVLQTICVALLFVLIVNIPWKRKKE*
Ga0126374_111059181	3300009792	Tropical Forest Soil	MMIEFRRWERTLLAICFAVILSLMFAPHSGRGLFRFAGYARGPFFIMPGHVDGKQLVLQTIFVAVLFALIVNI
Ga0126374_115598721	3300009792	Tropical Forest Soil	MMNRTLLAIIIAILISLMLAPHTGRGMLRFANHAHGPFFIMPSQVDRKQLVLQTIIISVAAVVIVNLFPRRGR
Ga0126384_102981472	3300010046	Tropical Forest Soil	MLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVLFALIVNIPWRRKKDDRG*
Ga0126384_106163391	3300010046	Tropical Forest Soil	MKRTLAAIIIALFISLMFAPHTGRGLVEFANYAHGPFFIMPHRVDGKQLVLQTLILGVLFVVIANTPWKKKG
Ga0126373_103363053	3300010048	Tropical Forest Soil	VIESRQLQRTLLAIFFAVILSLMFAPHTGRGLVRFTNYAHGPFFIHPSQVDRRQLVLQTIIIAVAATVIVNVLPRRPRN*
Ga0126373_106084981	3300010048	Tropical Forest Soil	MLSLMLAPHSGSGRGLFRFSGYARGPFFIMPSYIDGKQLVLQTIFIAAVFALIVNIPWRRQKKDDRD*
Ga0126370_115267792	3300010358	Tropical Forest Soil	LRFNSVAALWFNPSALMKRTLAAIIVAILVSLMFAPHTGRGLVEFANYAHGPFFIMPHRVDGKQLVIQTVIVAMLFALIVNIPWKGKRG*
Ga0126376_121448302	3300010359	Tropical Forest Soil	WERTLLAIFFAVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTSFLAVLFALIVNIPWRRKKDGRD*
Ga0126372_104562613	3300010360	Tropical Forest Soil	VIESRQLQRTLLAIFFAVMLSLMFAPHSGRGLFRFAGYAHGPFFIMPSCIDGKQLVLRTIFIAVVFALIVNIPWRRRKKSDRD*
Ga0126379_103502681	3300010366	Tropical Forest Soil	MMIEFRRWERTLLAIFFAVILSLMFAPHSGRGLLRFAGYAHAPFFIMPSHLDGKQLVLQTIFLAVLFALIVNIPWRRKKDGRD*
Ga0126379_103594543	3300010366	Tropical Forest Soil	MKRTVLAIIIAVLISLMLAPHSGRGLVEFANYAHGPFFIMPNRVDGKQLVIQTVIVAMLFALIVNIPWKDKRG*
Ga0126381_10001043112	3300010376	Tropical Forest Soil	MLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQFVLQTICVALLFVLIVNIPWKRKKE*
Ga0126381_1014554303	3300010376	Tropical Forest Soil	ERTLLAICFAVILSLMFAPHSGRGLFRFAGYARGPFFIMPDHVEGKQLVLQTIFVAVLFALIVNIPWRLKKDDRD*
Ga0126381_1020305292	3300010376	Tropical Forest Soil	MRTILAISIALLISLMFAPHSGRGLLRFMGYAHGPFFIQPSYVDWKQLVLQTIVIVLLFTLIVNIPWRRKKRE*
Ga0126381_1030015772	3300010376	Tropical Forest Soil	MMIEFRRWERTLLAIFFAVILSLMFAPHSGRGHLRFAGYAHGPFFIMPSYVDGKQLALQTIVIAVLFALIVNIPWRRRKDDRD*
Ga0126383_100716111	3300010398	Tropical Forest Soil	MMIEFRRWERTLLAICFAVILSLMFAPHSGRGLFRFAGYARGPFFIMPDHVEGKQLVLQTIFVAVLFALIVNIPWRRKKDDRG*
Ga0137363_100263955	3300012202	Vadose Zone Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNLPWPSRKKDDTD*
Ga0137399_110084542	3300012203	Vadose Zone Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRTLLRFAGYAHGPFFIMPSYVDGRQLVLQTIIIAVAAAVIVNLFPQRPRK*
Ga0137376_115353461	3300012208	Vadose Zone Soil	LNDAEQLKRTLLAIEIAVLFSLMVAPHSGGNLLRVEGYAHAPLFVASSQIDGKQLVLQTIFIAVLFALIVNIPWWRQKKDDRD*
Ga0137358_101511603	3300012582	Vadose Zone Soil	MKRTLLAVVIAVLISLMIAPHSGSGRSLFRFAGYAHGPFFIMPSYVDGRELVLQTIIAAVVAAVIVNLLPRRPRH*
Ga0137396_103538862	3300012918	Vadose Zone Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRTLLRFAGYAHGPFFIMPSYVDGRQLVLQTIIIAVAAAVIVNLFPQRPRK*
Ga0137396_103592883	3300012918	Vadose Zone Soil	MKRTLLAVAIAVLISLMFAQHSGSGRCLLRFAGYAHGPFFIMPSYVDGRELVLQTIIAAVVAAVIVNLLPRRPRH*
Ga0137419_100507433	3300012925	Vadose Zone Soil	LKRTLLAIVFAVLLSLMFAPHSGSGRTLLRFAGYAHGPFFIMPSHVDGRQLVLQTIIIAVAAAVIVNLFPQRPRK*
Ga0126369_118952661	3300012971	Tropical Forest Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRSANYAQGPFFITPSQVDRKQLVLQTIIIAVAAVVIVNLFPRRTKK*
Ga0126369_131759471	3300012971	Tropical Forest Soil	MLSLMLAPHSGRGLFRFANYAHGPFFIQPGYVDWKQLVLQTIVIAVAAAVIVNLFP
Ga0126369_134150922	3300012971	Tropical Forest Soil	MMIEFRRWERTLLAIFFAVMLSLMLAPHSGRGLLRFAGYAHRPFFIMPSHIDGKQLALQTIFLAVLFALIVNIPWRRKKDGRD*
Ga0157376_109876571	3300014969	Miscanthus Rhizosphere	MFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE*
Ga0137418_100412262	3300015241	Vadose Zone Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRTLLRFAGYAHGPFFIMPSHVDGRQLVLQTIIIAVAAAVIVNLFPQRPRK*
Ga0132258_112897251	3300015371	Arabidopsis Rhizosphere	MLSLMFAPHSGSGRGLLRFSGYARGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIPWGRRKNGDRD*
Ga0132255_1041384181	3300015374	Arabidopsis Rhizosphere	LNLDSCNEHFLAIFFAVILSMMFAPHSGRGLLRFANYAHGPFFITPHQIAGKPLLLQTIFLAVAAAVIVNLFPRKPKT*
Ga0182033_102898862	3300016319	Soil	MLSLMLAPHSGSGRGFFRLSGYARGPFFIMSSHIDGKQFVLQTIVIAAVFALIVNIPWQRRKKDDRD
Ga0182040_101737102	3300016387	Soil	RTLLAIFFGVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWRRKER
Ga0182039_112619112	3300016422	Soil	MLYGARRSVIEYRPLQRTLLAIFFGVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWRRKER
Ga0182038_101870234	3300016445	Soil	MLSLMLAPHSGSGRGLFRFSGYARGPFFIMPSYIDGKQLVLQTIFIALLFALIANIPWRRRKKDDAD
Ga0066655_101202263	3300018431	Grasslands Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYSHGPFFIMPSYVDGRQLVLQTIFIVVLFALVVNIPWPGRKKDDTD
Ga0193727_10736753	3300019886	Soil	TLLAIIFAVLLSLMFAPHSGSGRSLLPFGHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNISWPRRKKDDRD
Ga0126371_101027072	3300021560	Tropical Forest Soil	LKRTLLAITIAVLISLMFAPHRGRGLFRFAGYAHGPFFIMPSEIDRKQLVLQTIFIAVMLALIVNILWWRRRKNGRDGQDEVT
Ga0126371_105741992	3300021560	Tropical Forest Soil	MLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQFVLQTICVALLFVLIVNIPWKRKK
Ga0126371_132907881	3300021560	Tropical Forest Soil	MLSLMLAPHSGSGRGLLRFSGYARGPFFIMPSYIDGKQLVLQTIFIAAVFALIVNIPWRRQKKDDRD
Ga0207685_104703492	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNIPWSRWKKDDTD
Ga0207684_105248542	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFTGYAHGPFFIMPSHVDGRQLVLQTIFIAVLFALVVNIPWPRRKKDDRD
Ga0207681_109581071	3300025923	Switchgrass Rhizosphere	MFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE
Ga0207659_101663693	3300025926	Miscanthus Rhizosphere	LQRTLLAIFFAVMFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE
Ga0207668_116207952	3300025972	Switchgrass Rhizosphere	RQLQRTLLAIFFAVMFSLAFAPHSGRGLLPFAGYAHGPFFIMPSQIDGKQFLLQTILIAAVFALIVNIPWRRREKDDKE
Ga0257153_10776481	3300026490	Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVEGRQLVLQTIFIAVLFALVVNIPWPGRKKDDTD
Ga0209214_10406422	3300027071	Forest Soil	MLSLMFAPHSGRGLLRFAGYAHGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIPWRRRKKSDRD
Ga0170824_1109606672	3300031231	Forest Soil	LKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNIPWPRGKKG
Ga0170819_102175631	3300031469	Forest Soil	LKRTLLAIIFAVLLSLMFAPHSGGGRSLLRFAGYAHGPFFIMPRYVEGRQLVLQTIFIAVLFALVVNIPWPRRKRDDRD
Ga0318515_104946492	3300031572	Soil	LKRTLLAIIFAALLSLMLAPHSGSGRSLLRFAHGPFFIMPRYVDVKQLVLQTIFIALLFALIANIPWRRRKKDDAD
Ga0310915_108599041	3300031573	Soil	MNRTLLAISIAVLISLMFAPHTGRGALRFANYAHGPFFIMPSRVDRKQLVLQTIIIAVSAAVIVNLFPRSGSR
Ga0310813_115225711	3300031716	Soil	MKRTLLAIIFAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDRRQLVLQTIFIAVLFALVVNIPWPRRKKDDTD
Ga0306917_105941452	3300031719	Soil	LKRTLLAIIFAALLSLMLVPHSGSGRSLLRFAHGPFFIMPRYVDVKQLVLQTIFIALLFALIANIPWRRRKKDDAD
Ga0307469_109326312	3300031720	Hardwood Forest Soil	VIESRQLQRTLLAIFFAVMLSLMFAPHSGRGLLRFAGYAHGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIPWRRRKKSDRD
Ga0306918_103324831	3300031744	Soil	MLSLMLAPHSGSGRGFFRLSGYARGPFFIMPSHIDGKQFVLQTIVIAAVFALIVNIPWQRRKKDDRD
Ga0306918_106146781	3300031744	Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRFANYAHGPFFITPSQVDRKQLVLQTIIIAVSAAVIVNLFPRSGSR
Ga0306918_108315361	3300031744	Soil	MLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWRRKE
Ga0307473_104895421	3300031820	Hardwood Forest Soil	LDCRMANDRIRCHHQLKRTLLAIIFAVVLSLMFAPHSGSGRSLLRFADYAHGPFFIMPSYVEGRQLVLQTIFIAVLFALVVNIPWPGRKKDDTD
Ga0306919_103499463	3300031879	Soil	MLAPHSGSGRSLLRFAHGPFFIMPRYVDVKQLVLQTIFIALLFALIANIPWRRRKKDDAD
Ga0306919_105121442	3300031879	Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRFANYAHGPFFITPSQVDRKQLVFQTIIVAVAAVVIVNLFPRRTKK
Ga0306925_102503933	3300031890	Soil	MLSLMLAPHSGSGRGFFRFSGYARGPFFIMPSHIDGKQFVLQTIVIAAVFALIVNIPWQRRKKDDRD
Ga0306925_104620602	3300031890	Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRFANYAHGPFFITPSQVDRKQLVLQTIIIAVAAVVIVNLFPRRTKK
Ga0306925_108711542	3300031890	Soil	MLYGARRSVIECRQLQRTLLAIFFGVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWR
Ga0306921_100979281	3300031912	Soil	MLYGARRSVIECRQLQRTLLAIFFGVMLSLMLAPHSGRGLLRFAGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWRRKER
Ga0306921_111064591	3300031912	Soil	LNGGASMNRTLLAISIAVLISLMLTPHTGRGALRFANYAHGPFFIMPSQVDRNQLVLQTIIIAVAAVVIVNLFPRRGRK
Ga0306921_123301232	3300031912	Soil	LKRTLLAIIFAALLSLMLAPHSGSGRSLLRFAHGPFFIMPSSVDVKQLVLQTIFIALLFALIANIPWRRRKKDDAD
Ga0310916_104100932	3300031942	Soil	MLSLMLAPHSGSGRGFFRFSGYARGPFFIMPSHIDGKEFVLQTIVIAAVFALIVNIPWQRRKKDDRD
Ga0310913_112406261	3300031945	Soil	MNRTLLAISIAVLISLMLTPHTGRGALRFANYAHGPFFIMPSQVDRNQLVLQTIIIAVAAVVIVNLFPRRGRK
Ga0310910_109932671	3300031946	Soil	MNRTLLAISIAVLISLMFAPHTGRGALRFANYAHGPFFIMPSRVDRKQLVLQTIIIAVSAAVIVNLFPRSG
Ga0310909_110760591	3300031947	Soil	MNRTLLAISIAVLISLMFAPHTGRGLLRFANYAHGPFFITPSQVDRKQLVLQTIFFAVAAVVIVNLFPRR
Ga0306926_113437671	3300031954	Soil	TGRGLLRFANYAHGPFFMTPSQVDRKQLVLRTIIIAVAAVVIVNLFPRRGRK
Ga0306922_118756832	3300032001	Soil	VRVKVIPRGVHLRLVIESRQVQRTLLAIFFAVMLSLMLAPHSGRVLLRFMGYAHGPFFIQPSYVDPKQLVLQTIVIVLLFALVVNIPWRRKKDDRD
Ga0306924_102384342	3300032076	Soil	MLSLMLAPHSGRGLLRFGGYAHGPFFIMPSHIDGKQLALQTIFLAVVFALIANIPWRRKE
Ga0307471_1001280453	3300032180	Hardwood Forest Soil	LKRTLLAIIFAVLLSLMFARHSGSGRSLLRFAGYAHGPFFIMPSYIDGRQLVLQTIFIAVLFALVVNIPWPRQKKNDRD
Ga0307471_1015489021	3300032180	Hardwood Forest Soil	MMPKQLKRTLLAIIWAVLLSLVFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLLALVVNIPWPRRK
Ga0307471_1016973481	3300032180	Hardwood Forest Soil	APHSGRGLLRFAGYAHGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIPWRRRKKSDRD
Ga0307472_1017972171	3300032205	Hardwood Forest Soil	MLSLMFAPHSGRGLLRFAGYAHGPFFIMPSYIDGKQLVLQTIFIAVVFALIVNIP
Ga0306920_1003391151	3300032261	Soil	AAQGGSLLRIGGYAHAPVFVASSQIDWKQLVLQTIFIAVLFALIVNIPWRRQKKDDKARL
Ga0306920_1040410281	3300032261	Soil	GNLIRFGGYAHAPLFVASSQIDIRQLVLQTIFIAVLCALIVNIGWRRQKKDDRD
Ga0310810_114002901	3300033412	Soil	AVVIAVLLSLMFAPHSGSGRSLLRFAGYAHGPFFIMPSYVDGRQLVLQTIFIAVLFALVVNIPWPRRKKDDTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071778

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences