Metagenome Family F071764

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F071764
Family Type	Metagenome
Number of Sequences	122
Average Sequence Length	78 residues
Representative Sequence	MAHNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Number of Associated Samples	94
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.93 %
% of genes near scaffold ends (potentially truncated)	31.15 %
% of genes from short scaffolds (< 2000 bps)	79.51 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.934 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.492 % of family members)
Environment Ontology (ENVO)	Unclassified (32.787 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.262 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.00% Coil/Unstructured: 75.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00072	Response_reg	14.75
PF16360	GTP-bdg_M	4.92
PF11154	DUF2934	3.28
PF13167	GTP-bdg_N	3.28
PF09411	PagL	3.28
PF04226	Transgly_assoc	2.46
PF03459	TOBE	1.64
PF08450	SGL	1.64
PF02265	S1-P1_nuclease	1.64
PF00565	SNase	1.64
PF05154	TM2	0.82
PF08447	PAS_3	0.82
PF13505	OMP_b-brl	0.82
PF00487	FA_desaturase	0.82
PF09723	Zn-ribbon_8	0.82
PF01202	SKI	0.82
PF06051	DUF928	0.82
PF02705	K_trans	0.82
PF04851	ResIII	0.82
PF02805	Ada_Zn_binding	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.46
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	1.64
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	1.64
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.82
COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	Replication, recombination and repair [L]	0.82
COG2314	Uncharacterized membrane protein YozV, TM2 domain, contains pTyr	General function prediction only [R]	0.82
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.82
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.93 %
Unclassified	root	N/A	36.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.93 %
Unclassified	root	N/A	36.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.93 %
Unclassified	root	N/A	36.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	20.49 %
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	2.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	19.67 %
Nitrospirae bacterium RBG_19FT_COMBO_58_9	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	1.64 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.82 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	19.67 %
Nitrospirae bacterium RBG_19FT_COMBO_58_9	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	1.64 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	18.85 %
Nitrospirae bacterium RBG_19FT_COMBO_58_9	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	1.64 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	12.30 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	2.46 %
Nitrospirae bacterium RBG_19FT_COMBO_58_9	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	1.64 %
Paraburkholderia hospita	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	0.82 %
Nitrospira lenta	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira lenta	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.07 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	9.84 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	2.46 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1.64 %
Nitrospirae bacterium RBG_19FT_COMBO_58_9	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	1.64 %
Nitrospira sp. CG24B	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24B	0.82 %
Paraburkholderia hospita	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	0.82 %
Nitrospira lenta	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira lenta	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8849582	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1542	Open in IMG/M
2088090015\|GPICI_9042127	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300000787\|JGI11643J11755_11810337	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300001431\|F14TB_103544278	Not Available	695	Open in IMG/M
3300002073\|JGI24745J21846_1024733	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	713	Open in IMG/M
3300003349\|JGI26129J50193_1003394	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1119	Open in IMG/M
3300004156\|Ga0062589_100003053	All Organisms → cellular organisms → Bacteria	5467	Open in IMG/M
3300004463\|Ga0063356_101215351	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300005334\|Ga0068869_101885721	Not Available	535	Open in IMG/M
3300005338\|Ga0068868_101132608	Not Available	721	Open in IMG/M
3300005340\|Ga0070689_100312073	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300005343\|Ga0070687_100479183	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	833	Open in IMG/M
3300005347\|Ga0070668_100048045	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	3282	Open in IMG/M
3300005355\|Ga0070671_100555890	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005364\|Ga0070673_101206064	Not Available	709	Open in IMG/M
3300005457\|Ga0070662_101550700	Not Available	571	Open in IMG/M
3300005466\|Ga0070685_10082449	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1930	Open in IMG/M
3300005545\|Ga0070695_101767829	Not Available	518	Open in IMG/M
3300005614\|Ga0068856_102348101	Not Available	541	Open in IMG/M
3300005841\|Ga0068863_101858796	Not Available	612	Open in IMG/M
3300005842\|Ga0068858_100874625	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300006755\|Ga0079222_11713282	Not Available	603	Open in IMG/M
3300006844\|Ga0075428_100229076	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300006845\|Ga0075421_100027869	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	7130	Open in IMG/M
3300006846\|Ga0075430_101147626	Not Available	640	Open in IMG/M
3300006918\|Ga0079216_10131940	All Organisms → cellular organisms → Bacteria → Nitrospirae	1270	Open in IMG/M
3300007004\|Ga0079218_13286193	Not Available	547	Open in IMG/M
3300009098\|Ga0105245_10887644	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300009147\|Ga0114129_10062466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5203	Open in IMG/M
3300009156\|Ga0111538_11238429	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300009157\|Ga0105092_10091460	All Organisms → cellular organisms → Bacteria → Nitrospirae	1662	Open in IMG/M
3300009157\|Ga0105092_10146594	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300009157\|Ga0105092_10237961	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009168\|Ga0105104_10201013	Not Available	1083	Open in IMG/M
3300009174\|Ga0105241_12467893	Not Available	520	Open in IMG/M
3300009551\|Ga0105238_12551180	Not Available	547	Open in IMG/M
3300010371\|Ga0134125_10174303	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	2397	Open in IMG/M
3300010371\|Ga0134125_10391268	Not Available	1542	Open in IMG/M
3300010371\|Ga0134125_10698331	Not Available	1119	Open in IMG/M
3300011119\|Ga0105246_10602347	Not Available	950	Open in IMG/M
3300012897\|Ga0157285_10301023	Not Available	545	Open in IMG/M
3300012898\|Ga0157293_10015953	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300012900\|Ga0157292_10089178	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	900	Open in IMG/M
3300012905\|Ga0157296_10183412	Not Available	654	Open in IMG/M
3300012915\|Ga0157302_10015673	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1852	Open in IMG/M
3300012941\|Ga0162652_100089629	Not Available	542	Open in IMG/M
3300012951\|Ga0164300_10256038	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	892	Open in IMG/M
3300012955\|Ga0164298_10033770	Not Available	2326	Open in IMG/M
3300012958\|Ga0164299_10318664	All Organisms → cellular organisms → Bacteria → Nitrospirae	964	Open in IMG/M
3300012958\|Ga0164299_10439720	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	850	Open in IMG/M
3300012958\|Ga0164299_10786032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia hospita	677	Open in IMG/M
3300012960\|Ga0164301_10516957	All Organisms → cellular organisms → Bacteria → Nitrospirae	865	Open in IMG/M
3300012961\|Ga0164302_10386222	All Organisms → cellular organisms → Bacteria → Nitrospirae	949	Open in IMG/M
3300012984\|Ga0164309_10273535	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1204	Open in IMG/M
3300012985\|Ga0164308_11637739	Not Available	595	Open in IMG/M
3300012986\|Ga0164304_10024585	Not Available	2981	Open in IMG/M
3300012987\|Ga0164307_10685977	Not Available	801	Open in IMG/M
3300012988\|Ga0164306_10217029	All Organisms → cellular organisms → Bacteria → Nitrospirae	1352	Open in IMG/M
3300012988\|Ga0164306_10432472	Not Available	997	Open in IMG/M
3300012989\|Ga0164305_10037271	All Organisms → cellular organisms → Bacteria → Nitrospirae	2731	Open in IMG/M
3300013102\|Ga0157371_10146397	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1683	Open in IMG/M
3300013296\|Ga0157374_10067026	All Organisms → cellular organisms → Bacteria	3374	Open in IMG/M
3300013296\|Ga0157374_10671246	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1049	Open in IMG/M
3300014745\|Ga0157377_11132076	Not Available	602	Open in IMG/M
3300014745\|Ga0157377_11695988	Not Available	509	Open in IMG/M
3300015200\|Ga0173480_10172223	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300015371\|Ga0132258_10113137	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	6430	Open in IMG/M
3300015371\|Ga0132258_10122992	All Organisms → cellular organisms → Bacteria	6170	Open in IMG/M
3300015371\|Ga0132258_10657820	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2635	Open in IMG/M
3300015372\|Ga0132256_100134126	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2462	Open in IMG/M
3300015372\|Ga0132256_100306142	Not Available	1674	Open in IMG/M
3300015372\|Ga0132256_100810636	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300015372\|Ga0132256_102839100	Not Available	582	Open in IMG/M
3300015373\|Ga0132257_100117065	All Organisms → cellular organisms → Bacteria	3090	Open in IMG/M
3300015373\|Ga0132257_100193214	Not Available	2408	Open in IMG/M
3300015373\|Ga0132257_102013065	All Organisms → cellular organisms → Bacteria → Nitrospirae	745	Open in IMG/M
3300015374\|Ga0132255_100100047	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	3936	Open in IMG/M
3300015374\|Ga0132255_100189474	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. CG24B	2902	Open in IMG/M
3300015374\|Ga0132255_105473029	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira lenta	537	Open in IMG/M
3300018067\|Ga0184611_1207039	Not Available	697	Open in IMG/M
3300022756\|Ga0222622_11210048	Not Available	556	Open in IMG/M
3300022892\|Ga0247753_1012690	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025927\|Ga0207687_10828445	Not Available	790	Open in IMG/M
3300025936\|Ga0207670_10313291	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300025945\|Ga0207679_10085801	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	2419	Open in IMG/M
3300025960\|Ga0207651_10463778	Not Available	1089	Open in IMG/M
3300025972\|Ga0207668_10318692	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300026023\|Ga0207677_12131725	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027360\|Ga0209969_1023304	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300027364\|Ga0209967_1003664	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300027395\|Ga0209996_1044888	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300027462\|Ga0210000_1035299	Not Available	787	Open in IMG/M
3300027722\|Ga0209819_10052048	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1405	Open in IMG/M
3300027722\|Ga0209819_10141438	All Organisms → cellular organisms → Bacteria → Nitrospirae	842	Open in IMG/M
3300027880\|Ga0209481_10083048	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300031538\|Ga0310888_10087278	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300031538\|Ga0310888_10210421	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1074	Open in IMG/M
3300031547\|Ga0310887_10242860	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300031548\|Ga0307408_100030287	Not Available	3756	Open in IMG/M
3300031548\|Ga0307408_100094856	All Organisms → cellular organisms → Bacteria → Nitrospirae	2260	Open in IMG/M
3300031562\|Ga0310886_10063150	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300031562\|Ga0310886_10162211	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300031562\|Ga0310886_10545036	Not Available	706	Open in IMG/M
3300031716\|Ga0310813_10141202	Not Available	1927	Open in IMG/M
3300031716\|Ga0310813_10399901	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300031854\|Ga0310904_10218944	All Organisms → cellular organisms → Bacteria → Nitrospirae	1160	Open in IMG/M
3300031858\|Ga0310892_10110042	Not Available	1527	Open in IMG/M
3300031901\|Ga0307406_10411588	All Organisms → cellular organisms → Bacteria → Nitrospirae	1075	Open in IMG/M
3300031903\|Ga0307407_11408612	Not Available	549	Open in IMG/M
3300031908\|Ga0310900_10377803	Not Available	1069	Open in IMG/M
3300031908\|Ga0310900_11632361	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium RBG_19FT_COMBO_58_9	546	Open in IMG/M
3300031911\|Ga0307412_10029090	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3464	Open in IMG/M
3300032000\|Ga0310903_10300487	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300032002\|Ga0307416_100408383	Not Available	1398	Open in IMG/M
3300032004\|Ga0307414_11114406	All Organisms → cellular organisms → Bacteria → Nitrospirae	729	Open in IMG/M
3300032005\|Ga0307411_10751002	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	854	Open in IMG/M
3300032122\|Ga0310895_10040754	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1652	Open in IMG/M
3300032180\|Ga0307471_102519975	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300032205\|Ga0307472_101726314	Not Available	619	Open in IMG/M
3300033412\|Ga0310810_10023548	All Organisms → cellular organisms → Bacteria	7463	Open in IMG/M
3300033412\|Ga0310810_10312125	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300033412\|Ga0310810_10318711	Not Available	1657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.28%
Host-Associated	Host-Associated	46.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	46.72%
Plants	Host-Associated → Plants	46.72%
Aquatic	Environmental → Aquatic	6.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.03%
Freshwater	Environmental → Aquatic → Freshwater	4.92%
Sediment	Environmental → Aquatic → Sediment	1.64%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.92%
Loam	Environmental → Terrestrial → Soil → Loam	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.64%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.82%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.10%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.28%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.28%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027364	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00552160	2088090015	Soil	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG
GPICI_02289850	2088090015	Soil	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
JGI11643J11755_118103372	3300000787	Soil	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCNGDWAGPIEPPA*
F14TB_1035442781	3300001431	Soil	MWACFLSQKQTGGISPEGIRMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEP*
JGI24745J21846_10247331	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	DFGTVGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASEXLEQCHGDWAGPIEPPG*
JGI26129J50193_10033942	3300003349	Arabidopsis Thaliana Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0062589_1000030532	3300004156	Soil	MADNKTDPRQWTSEKPRTSGYYYYRQSNDEEPIVLKVEVLDGRMGLNSVVWLPGDNTAEPLEQCHGDWAGPIEPPV*
Ga0063356_1012153512	3300004463	Arabidopsis Thaliana Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0068869_1018857211	3300005334	Miscanthus Rhizosphere	GIPMADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPQG*
Ga0068868_1011326082	3300005338	Miscanthus Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPDDNAAEPLEQC
Ga0070689_1003120731	3300005340	Switchgrass Rhizosphere	MGVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0070687_1004791832	3300005343	Switchgrass Rhizosphere	FGTVGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0070668_1000480453	3300005347	Switchgrass Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSSDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0070671_1005558901	3300005355	Switchgrass Rhizosphere	KQTGGVSLEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNVAEPLEQCHGDWAGPIEP*
Ga0070673_1012060642	3300005364	Switchgrass Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA*
Ga0070662_1015507001	3300005457	Corn Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIETPP*
Ga0070685_100824493	3300005466	Switchgrass Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0070695_1017678291	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GVAGARLGSAGGLSPGGIPMADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPQG*
Ga0068856_1023481011	3300005614	Corn Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0068863_1018587962	3300005841	Switchgrass Rhizosphere	MADDKSDSRKWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0068858_1008746251	3300005842	Switchgrass Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIE
Ga0079222_117132822	3300006755	Agricultural Soil	MLLEVIPMADNKTDLRQWRSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGVVWLLGDNASEPLEQCHGDWAGPIEPPG*
Ga0075428_1002290763	3300006844	Populus Rhizosphere	VAPGVIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0075421_10002786913	3300006845	Populus Rhizosphere	MADSKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0075430_1011476261	3300006846	Populus Rhizosphere	MADNKTESRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEILDGRKGRVSVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0079216_101319401	3300006918	Agricultural Soil	VERWTAITKQDEPNQTGGVSPEGIPMTDCNTDSRQWTSEKPTKSGFYYYRQSDNEDPIVLKVDVLDDRKGHVSVVWLHGDNAAEPLEQCHGDWAGPIEPPP*
Ga0079218_132861931	3300007004	Agricultural Soil	MAVNNDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEILDDRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0105245_108876442	3300009098	Miscanthus Rhizosphere	MADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA*
Ga0114129_100624665	3300009147	Populus Rhizosphere	VNELTWTTEKPKKSGFYFYRQSRDEDPIILKVELESGRMGRDRLVWLHADNAPEQLIQCHGEFAGPIEPPT*
Ga0111538_112384292	3300009156	Populus Rhizosphere	MLRASDFGTVGQMNMDPRQWTSERPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGVVWLLGDNASEPLEQCHGDWAGPIEPPG*
Ga0105092_100914604	3300009157	Freshwater Sediment	VSKLTWTTEKPTKSGFYFYRQSGDEDPILLKVEIEVDRISHRLVWLHGDNAPESLEQCHGDWAGPIEPPL*
Ga0105092_101465941	3300009157	Freshwater Sediment	SEKPTKSGFYYYRQSNDEEPIVLKVEVLDERKGLISVVWLPGDSAAEPLEQCHGDWAGPIEPPA*
Ga0105092_102379612	3300009157	Freshwater Sediment	LSQKQTGGVSPEGIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPA*
Ga0105104_102010131	3300009168	Freshwater Sediment	LSQKQTGGVSPEGIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQ
Ga0105241_124678932	3300009174	Corn Rhizosphere	MADNKTDPRQWTSEKPRTSGYYYYRQSNDEEPIVLKVEVLDGRMGLNSVVWLPGDNTAEPLEQCHGDWAGPIETPP*
Ga0105238_125511802	3300009551	Corn Rhizosphere	LRASDFGTVGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0134125_101743032	3300010371	Terrestrial Soil	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPI*
Ga0134125_103912681	3300010371	Terrestrial Soil	MADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0134125_106983313	3300010371	Terrestrial Soil	LCEIWESQELGWDQPAGVSPEGMRMAHNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIETPP*
Ga0105246_106023472	3300011119	Miscanthus Rhizosphere	MADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAAEPLEQCHGDWAGPIEPPP*
Ga0157285_103010232	3300012897	Soil	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASEPLEQCHGDWAGPIEPPG*
Ga0157293_100159531	3300012898	Soil	SERPTKSGFYYYRQSNDEDPIVLKVEVLDDRKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0157292_100891781	3300012900	Soil	RASDFGTVGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0157296_101834121	3300012905	Soil	LSPGGIPMADNKTDPRQWTSEKPKKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0157302_100156732	3300012915	Soil	MLRASDFGTVGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0162652_1000896291	3300012941	Soil	MADNITDSPQWTSEKPTKSGFYYYRQSDDEEAIVLKVEVLDDRKGLNSVVWLPGDNAAEPLEQCHGDWAGPIEPPV*
Ga0164300_102560381	3300012951	Soil	MVGWYDHGRLGEGKSPEGIPMVDNKTDSRQWTSERPTKSGFYYYRQSNDEEPIVLKVEVLDDREGHISVVWLPGDNAAEPLEKCHGDWAGPISRTN*
Ga0164298_100337702	3300012955	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDRKGHISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0164299_103186642	3300012958	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDRKGNISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0164299_104397202	3300012958	Soil	MVGWYDHGPLGEGKSPEGIPMVDNKTDSRQWTSERPTKSGFYYYRQSNDEEPIVLKVEVLDDREGHISVVWLPGDNAAEPLEKCHGDWAGPIETPP*
Ga0164299_107860321	3300012958	Soil	QHYFEHRRKIAAQFEGILMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDGRGPISVVWLPGDNAPERLEQCHGDWAGPIEPPV*
Ga0164301_105169571	3300012960	Soil	MVGWYDHGRLGEGKSPEGIPMVDNKTDSRQWTSERPTKSGFYYYRQSNDEEPIVLKVEVLDDREGHISVVWLPGDNAAEPLEKCH
Ga0164302_103862223	3300012961	Soil	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDRKGHISVVWLPGDNAAEPLEQRHGDWAGPIEP*
Ga0164309_102735352	3300012984	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSNDEDPIVLKVDVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0164308_116377392	3300012985	Soil	VSQKQTGGASPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSNDEDPIVLKVDVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPISRTN*
Ga0164304_100245852	3300012986	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0164307_106859772	3300012987	Soil	MAHNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDREGHISVVWLPGDNAAEPLEKCHGDWAGPISRTN*
Ga0164306_102170293	3300012988	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSERPTKSGFYYYRQSNDEEPIVLKVEVLDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0164306_104324721	3300012988	Soil	MAHNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0164305_100372713	3300012989	Soil	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDRKGNISVVWLPGDNAAEPLEKCHGDWAGPIEP*
Ga0157371_101463972	3300013102	Corn Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPSVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG*
Ga0157374_100670261	3300013296	Miscanthus Rhizosphere	MGVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLHGDNTAETLENCPGDWAGPIEPPA*
Ga0157374_106712461	3300013296	Miscanthus Rhizosphere	MADNKTDPRQWTLEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0157377_111320761	3300014745	Miscanthus Rhizosphere	MADNKTDPRQWTSEKPTNSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA*
Ga0157377_116959881	3300014745	Miscanthus Rhizosphere	EKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIETPP*
Ga0173480_101722232	3300015200	Soil	MNMDPRQWTSEKPTKSGFYYYRQSNDKEPIVLKVEVLDGRKGLNSVVWLPGDNAAEPLEQCHGDWAGPIEPPG*
Ga0132258_101131377	3300015371	Arabidopsis Rhizosphere	PKQTGGLSPGGIPMADNKTDPRQWTSETPKKSGFYYYRQSNDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEKCHGDWAGPIEPSV*
Ga0132258_1012299210	3300015371	Arabidopsis Rhizosphere	MGVSPESIRMANNITDSRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLISVVWLPDDNVAEPLEKCHGDWAGPIEPPP*
Ga0132258_106578202	3300015371	Arabidopsis Rhizosphere	MADNKSDSRQWTSEKPTTSGFYYYRQSNDEEPIVLKVDVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPP*
Ga0132256_1001341262	3300015372	Arabidopsis Rhizosphere	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDILDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEP*
Ga0132256_1003061422	3300015372	Arabidopsis Rhizosphere	MADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEKCHGDWAGPIEPSV*
Ga0132256_1008106363	3300015372	Arabidopsis Rhizosphere	MGVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLISVVWLPDDNVAEPLEKCHGDWAGPIEP
Ga0132256_1028391001	3300015372	Arabidopsis Rhizosphere	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNVAEPLEQCHGDWAGPIEP*
Ga0132257_1001170653	3300015373	Arabidopsis Rhizosphere	MADNKTDPRQWTSETPKKSGFYYYRQSTDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0132257_1001932141	3300015373	Arabidopsis Rhizosphere	EGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNVAEPLEQCHGDWAGPIEP*
Ga0132257_1020130651	3300015373	Arabidopsis Rhizosphere	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDMLDDREGHISVVWLPGDNVAEPLEQCHGDWVGPIEP*
Ga0132255_1001000477	3300015374	Arabidopsis Rhizosphere	GVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLISVVWLPDDNVAEPLEKCHGDWAGPIEPPP*
Ga0132255_1001894741	3300015374	Arabidopsis Rhizosphere	GGLSPGGIPMADNKTDPRQWTSETPKKSGFYYYRQSNDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEKCHGDWAGPIEPSV*
Ga0132255_1054730291	3300015374	Arabidopsis Rhizosphere	GGLSPGGIPMADNKTDPRQWTSETPKKSGFYYYRQSTDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPV*
Ga0184611_12070392	3300018067	Groundwater Sediment	MHVTVLYRPFKLTHYQTGGVSPEGIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDRKGAISVVWLPGDNAPEPLEQCHGDWAGPIEPPV
Ga0222622_112100481	3300022756	Groundwater Sediment	MAENKTDPHQWTSEKPTKSGFYYYRQSNDEDPIVLKVELLDDRKVVWLLGDNDAEPLEQCHGDWAGPIEPPA
Ga0247753_10126902	3300022892	Soil	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAG
Ga0207687_108284452	3300025927	Miscanthus Rhizosphere	MADNKTDPRQWTSEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA
Ga0207670_103132911	3300025936	Switchgrass Rhizosphere	PRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG
Ga0207679_100858012	3300025945	Corn Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPI
Ga0207651_104637783	3300025960	Switchgrass Rhizosphere	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA
Ga0207668_103186922	3300025972	Switchgrass Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSSDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPI
Ga0207677_121317251	3300026023	Miscanthus Rhizosphere	SEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA
Ga0209969_10233042	3300027360	Arabidopsis Thaliana Rhizosphere	VAPGVIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0209967_10036643	3300027364	Arabidopsis Thaliana Rhizosphere	MADSKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0209996_10448882	3300027395	Arabidopsis Thaliana Rhizosphere	DSIMMSIEENVQSNLKTWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0210000_10352991	3300027462	Arabidopsis Thaliana Rhizosphere	MADSKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAG
Ga0209819_100520482	3300027722	Freshwater Sediment	VSPEGIPMADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDERKGLISVVWLPGDSAAEPLEQCHGDWAGPIEPPA
Ga0209819_101414382	3300027722	Freshwater Sediment	VSKLTWTTEKPTKSGFYFYRQSGDEDPILLKVEIEVDRISHRLVWLHGDNAPESLEQCHGDWAGPIEPPL
Ga0209481_100830482	3300027880	Populus Rhizosphere	MNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASEPLEQCHGDWAGPIEPPG
Ga0310888_100872782	3300031538	Soil	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDRKGHISVVWLPGDNAAEPLEQCHGDWAGPIEP
Ga0310888_102104212	3300031538	Soil	MADNKSDSRQWTSEKPTTSGFYYYRQSNDEEPIVLKVDVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPP
Ga0310887_102428602	3300031547	Soil	MDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG
Ga0307408_1000302872	3300031548	Rhizosphere	MADNKTDLRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEILDGRKGRISVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0307408_1000948563	3300031548	Rhizosphere	MADNKTDSRQWTSEKPTKSGFYYYRQSNDEEPILLKVEVLNDRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPSA
Ga0310886_100631503	3300031562	Soil	VAPGVIPMADSKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0310886_101622113	3300031562	Soil	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNAAEPLEKCHGDWAGPIEP
Ga0310886_105450362	3300031562	Soil	MAHNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0310813_101412023	3300031716	Soil	MADNKTDPRQWTSEKPRTSGYYYYRQSNDEEPIVLKVEVLDGRMGLNSVVWLPGDNTAEPLEQCHGDWAGPIEPPV
Ga0310813_103999011	3300031716	Soil	MGVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLNSVVWLPGDNAAEPLEQCHGDWAGPIEPPG
Ga0310904_102189443	3300031854	Soil	MADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEP
Ga0310892_101100422	3300031858	Soil	MADNKSDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEP
Ga0307406_104115881	3300031901	Rhizosphere	MPMADNKTDSRQWTSEKPTKSGFYYYRQSNDEEPILLKVEVLNDRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPSA
Ga0307407_114086121	3300031903	Rhizosphere	MADKTDGRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDDRKGLNSVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0310900_103778031	3300031908	Soil	SEKPTTSGFYYYRQSNDEEPIVLKVDVLDDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPP
Ga0310900_116323612	3300031908	Soil	VSQKQTGGVSPEGIPMADNKTDSRQWTSEKPTKSGFYYYRQSDDEDPIVLKVDVLDDREGHISVVWLPGDNAAEPLEQCHGDWAGPIEPPP
Ga0307412_100290903	3300031911	Rhizosphere	MADNKTDSRQWTSEKPTKSGFYYYRQSNDEEPILLKVEVLNDRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPSA
Ga0310903_103004872	3300032000	Soil	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVHDGRKGLMSVVWLPGDNAAEPLEQCHGDWAGPIEPLA
Ga0307416_1004083832	3300032002	Rhizosphere	MSAPKQTGDVSSEGIPMADNKIDPRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVRDDRKGLSSVVWLPGDNDAEPLEQCHGDWAGPIEPPA
Ga0307414_111144062	3300032004	Rhizosphere	MADNKTDSRQWTSEKPTKSGFYYYRQSNDEEPILLKVEVLNDRKGLISVVWLPGDNAAEPLEQCH
Ga0307411_107510021	3300032005	Rhizosphere	SPEGIPMADNKTDLRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEILDGRKGRISVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0310895_100407544	3300032122	Soil	VGQMNMDPRQWTSEKPTKSGFYYYRQSNDEDPIVLKVEVLDDCKGVVWLLGDNASESLEQCHGDWAGPIEPPG
Ga0307471_1025199751	3300032180	Hardwood Forest Soil	ARLGSAGGVSAEGIPMADNQTDSRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDRKGPISVVWLPGDNAPEPLEQCHGDWAGPIEPPV
Ga0307472_1017263141	3300032205	Hardwood Forest Soil	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVEVLDGRKGLISVVWLPGDNAAEPLEQCHGDWAGPIEPPA
Ga0310810_100235484	3300033412	Soil	MGVSPESIRMADNITDSRQWTSEKPTKSGFYYYRQSDDEEPIVLKVEVLDDRKGLISVVWLPDDNVAEPLEKCHGDWAGPIEPPP
Ga0310810_103121254	3300033412	Soil	MADNKTDPRQWTLEKPKKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPA
Ga0310810_103187111	3300033412	Soil	MADNKTDPRQWTSEKPTKSGFYYYRQSNDEEPIVLKVELLDDREGPISVVWLPGDNAPEPLEKCHGDWAGPIEPPQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F071764

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences